Pregenerated sensors for CD302 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060703Ensembl transcript IDs: ENSMUST00000028356.9, ENSMUST00000074606.11
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CCAGCTTTATTGTACTTGCAGCTTTCATGTACTCAAATGAAAACTACACAAGAAGGAAATTATTGTCAATaGATTCAATATGCTGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: PALLYLQLSCTQMKTTQEGNYCQ*IQYAGL Trigger: CAGGCCAGCATATTGAATCCATTGACAATAATTTCC...TTCTTGTGTAGTTTTCATTTGAGTACATGAAAGCTGCAAGTACAATAAAGCTGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028356.9 ENSMUST00000074606.11 |
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| 3UTR-3UTR CCA 90 bp | CGTTTTACCAGCTTTATTGTACTTGCAGCTTTCATGTACTCAAATGAAAACTACGGAAATTATTGTCAATaGATTCAATATGCTGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: RFTSFIVLAAFMYSNENYGNYCQ*IQYAGL Trigger: CAGGCCAGCATATTGAATCCATTGACAATAATTTCC...GTAGTTTTCATTTGAGTACATGAAAGCTGCAAGTACAATAAAGCTGGTAAAACG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028356.9 ENSMUST00000074606.11 |
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| 3UTR TCA 72 bp | CAGCTTTATTGTACTTGCAGCTTTCATGTACTCAAATaGAAACTACACAAGAAAACGTGTAAGTTAGATCCA | + |
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Preference number: 3 (lower is better) Translates to: QLYCTCSFHVLK*KLHKKTCKLDP Trigger: TGGATCTAACTTACACGTTTTCTTGTGTAGTTTTCATTTGAGTACATGAAAGCTGCAAGTACAATAAAGCTG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028356.9 ENSMUST00000074606.11 |
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| CDS-3UTR TCA 90 bp | CGTTTTACCAGCTTTATTGTACTTGCAGCTTTCATGTACTCAAATGAAAACTACCAGGTGAAAAAGAGGTaGAGCCAGAGCGCGCGTTTC | + |
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Preference number: 4 (lower is better) Translates to: RFTSFIVLAAFMYSNENYQVKKR*SQSARF Trigger: GAAACGCGCGCTCTGGCTTCACCTCTTTTTCACCTG...GTAGTTTTCATTTGAGTACATGAAAGCTGCAAGTACAATAAAGCTGGTAAAACG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028356.9 ENSMUST00000074606.11 |
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| CDS-3UTR TCA 90 bp | CCAGCTTTATTGTACTTGCAGCTTTCATGTACTCAAATGAAAACTACACAAGAACAGGTGAAAAAGAGGTaGAGCCAGAGCGCGCGTTTC | + |
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Preference number: 4 (lower is better) Translates to: PALLYLQLSCTQMKTTQEQVKKR*SQSARF Trigger: GAAACGCGCGCTCTGGCTTCACCTCTTTTTCACCTG...TTCTTGTGTAGTTTTCATTTGAGTACATGAAAGCTGCAAGTACAATAAAGCTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028356.9 ENSMUST00000074606.11 |
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| CDS-3UTR GCA 90 bp | CGTTTTACCAGCTTTATTGTACTTGCAGCTTTCATGTACTCAAATGAAAACTACGATCGCTCCCAAAACTaGCAGAGTTACTGTGCTAGC | + |
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Preference number: 4 (lower is better) Translates to: RFTSFIVLAAFMYSNENYDRSQN*QSYCAS Trigger: GCTAGCACAGTAACTCTGGCAGTTTTGGGAGCGATC...GTAGTTTTCATTTGAGTACATGAAAGCTGCAAGTACAATAAAGCTGGTAAAACG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028356.9 ENSMUST00000074606.11 |
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| CDS-3UTR GCA 90 bp | CGTTTTACCAGCTTTATTGTACTTGCAGCTTTCATGTACTCAAATGAAAACTACCCTCTTCATTGTGTATaGTTACCATGTCTGCCCCGT | + |
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Preference number: 4 (lower is better) Translates to: RFTSFIVLAAFMYSNENYPLHCV*LPCLPR Trigger: ACGGGGCAGACATGGTAAGCATACACAATGAAGAGG...GTAGTTTTCATTTGAGTACATGAAAGCTGCAAGTACAATAAAGCTGGTAAAACG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028356.9 ENSMUST00000074606.11 |
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| CDS-3UTR GCA 90 bp | CCAGCTTTATTGTACTTGCAGCTTTCATGTACTCAAATGAAAACTACACAAGAACCTCTTCATTGTGTATaGTTACCATGTCTGCCCCGT | + |
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Preference number: 4 (lower is better) Translates to: PALLYLQLSCTQMKTTQEPLHCV*LPCLPR Trigger: ACGGGGCAGACATGGTAAGCATACACAATGAAGAGG...TTCTTGTGTAGTTTTCATTTGAGTACATGAAAGCTGCAAGTACAATAAAGCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028356.9 ENSMUST00000074606.11 |
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| CDS-3UTR GCA 90 bp | CGTTTTACCAGCTTTATTGTACTTGCAGCTTTCATGTACTCAAATGAAAACTACCAGTGTCATAGAACATaGCTAGCAGGAGATCATCTG | + |
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Preference number: 4 (lower is better) Translates to: RFTSFIVLAAFMYSNENYQCHRT*LAGDHL Trigger: CAGATGATCTCCTGCTAGGCATGTTCTATGACACTG...GTAGTTTTCATTTGAGTACATGAAAGCTGCAAGTACAATAAAGCTGGTAAAACG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028356.9 ENSMUST00000074606.11 |
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| CDS-3UTR GCA 90 bp | CCAGCTTTATTGTACTTGCAGCTTTCATGTACTCAAATGAAAACTACACAAGAACAGTGTCATAGAACATaGCTAGCAGGAGATCATCTG | + |
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Preference number: 4 (lower is better) Translates to: PALLYLQLSCTQMKTTQEQCHRT*LAGDHL Trigger: CAGATGATCTCCTGCTAGGCATGTTCTATGACACTG...TTCTTGTGTAGTTTTCATTTGAGTACATGAAAGCTGCAAGTACAATAAAGCTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028356.9 ENSMUST00000074606.11 |
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| CDS-3UTR GCA 90 bp | CCAGCTTTATTGTACTTGCAGCTTTCATGTACTCAAATGAAAACTACACAAGAAGGTTATTTGCTGCTTTaGAAAGTGTTCCCTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: PALLYLQLSCTQMKTTQEGYLLL*KVFPPQ Trigger: CTGTGGAGGGAACACTTTGCAAAGCAGCAAATAACC...TTCTTGTGTAGTTTTCATTTGAGTACATGAAAGCTGCAAGTACAATAAAGCTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028356.9 |
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| CDS-3UTR GCA 90 bp | CCAGCTTTATTGTACTTGCAGCTTTCATGTACTCAAATGAAAACTACACAAGAAATATTCATCTTCTTCTaGAACTACCAGGGCACAGCC | + |
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Preference number: 4 (lower is better) Translates to: PALLYLQLSCTQMKTTQEIFIFF*NYQGTA Trigger: GGCTGTGCCCTGGTAGTTGCAGAAGAAGATGAATAT...TTCTTGTGTAGTTTTCATTTGAGTACATGAAAGCTGCAAGTACAATAAAGCTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028356.9 ENSMUST00000074606.11 |
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| CDS-3UTR GCA 90 bp | CGTTTTACCAGCTTTATTGTACTTGCAGCTTTCATGTACTCAAATGAAAACTACATATTCATCTTCTTCTaGAACTACCAGGGCACAGCC | + |
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Preference number: 4 (lower is better) Translates to: RFTSFIVLAAFMYSNENYIFIFF*NYQGTA Trigger: GGCTGTGCCCTGGTAGTTGCAGAAGAAGATGAATAT...GTAGTTTTCATTTGAGTACATGAAAGCTGCAAGTACAATAAAGCTGGTAAAACG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028356.9 ENSMUST00000074606.11 |
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| CDS-3UTR GCA 90 bp | CGTTTTACCAGCTTTATTGTACTTGCAGCTTTCATGTACTCAAATGAAAACTACGTCATATGGGATTGCTaGTTTGCAAAGTGTTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: RFTSFIVLAAFMYSNENYVIWDC*FAKCSL Trigger: GAGGGAACACTTTGCAAAGCAGCAATCCCATATGAC...GTAGTTTTCATTTGAGTACATGAAAGCTGCAAGTACAATAAAGCTGGTAAAACG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074606.11 |
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| CDS-3UTR CCA 90 bp | CGTTTTACCAGCTTTATTGTACTTGCAGCTTTCATGTACTCAAATGAAAACTACTCCATTCACCTGTCTTaGTGTACAGAAAACCACAGG | + |
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Preference number: 4 (lower is better) Translates to: RFTSFIVLAAFMYSNENYSIHLS*CTENHR Trigger: CCTGTGGTTTTCTGTACACCAAGACAGGTGAATGGA...GTAGTTTTCATTTGAGTACATGAAAGCTGCAAGTACAATAAAGCTGGTAAAACG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028356.9 ENSMUST00000074606.11 |
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| CDS-3UTR CCA 90 bp | CCAGCTTTATTGTACTTGCAGCTTTCATGTACTCAAATGAAAACTACACAAGAATCCATTCACCTGTCTTaGTGTACAGAAAACCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: PALLYLQLSCTQMKTTQESIHLS*CTENHR Trigger: CCTGTGGTTTTCTGTACACCAAGACAGGTGAATGGA...TTCTTGTGTAGTTTTCATTTGAGTACATGAAAGCTGCAAGTACAATAAAGCTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028356.9 ENSMUST00000074606.11 |
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| CDS-3UTR GCA 90 bp | CGTTTTACCAGCTTTATTGTACTTGCAGCTTTCATGTACTCAAATGAAAACTACCCCTTCCATCGCTTTTaGAAAGTGTCCAGTATAAAC | + |
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Preference number: 4 (lower is better) Translates to: RFTSFIVLAAFMYSNENYPFHRF*KVSSIN Trigger: GTTTATACTGGACACTTTGCAAAAGCGATGGAAGGG...GTAGTTTTCATTTGAGTACATGAAAGCTGCAAGTACAATAAAGCTGGTAAAACG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000028356.9 ENSMUST00000074606.11 |
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| CDS-3UTR GCA 90 bp | CCAGCTTTATTGTACTTGCAGCTTTCATGTACTCAAATGAAAACTACACAAGAACTTGTCATATGGGATTaGTGCTTTGCAAAGTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: PALLYLQLSCTQMKTTQELVIWD*CFAKCS Trigger: GGAACACTTTGCAAAGCAGCAATCCCATATGACAAG...TTCTTGTGTAGTTTTCATTTGAGTACATGAAAGCTGCAAGTACAATAAAGCTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074606.11 |
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| CDS-3UTR GCA 90 bp | CCAGCTTTATTGTACTTGCAGCTTTCATGTACTCAAATGAAAACTACACAAGAAAATGTGGTTATTTGCTaGTTTGCAAAGTGTTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: PALLYLQLSCTQMKTTQENVVIC*FAKCSL Trigger: GAGGGAACACTTTGCAAAGCAGCAAATAACCACATT...TTCTTGTGTAGTTTTCATTTGAGTACATGAAAGCTGCAAGTACAATAAAGCTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028356.9 |
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| CDS-3UTR TCA 90 bp | CCAGCTTTATTGTACTTGCAGCTTTCATGTACTCAAATGAAAACTACACAAGAAAATGATCATACCACTTaGAAGTTGCATCATCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PALLYLQLSCTQMKTTQENDHTT*KLHHQC Trigger: ACACTGATGATGCAACTTTCAAGTGGTATGATCATT...TTCTTGTGTAGTTTTCATTTGAGTACATGAAAGCTGCAAGTACAATAAAGCTGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028356.9 ENSMUST00000074606.11 |
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| CDS-3UTR CCA 90 bp | CGTTTTACCAGCTTTATTGTACTTGCAGCTTTCATGTACTCAAATGAAAACTACATACTTCTTGTCATATaGGATTGCTGCTTTGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RFTSFIVLAAFMYSNENYILLVI*DCCFAK Trigger: CTTTGCAAAGCAGCAATCCCATATGACAAGAAGTAT...GTAGTTTTCATTTGAGTACATGAAAGCTGCAAGTACAATAAAGCTGGTAAAACG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074606.11 |
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| CDS-3UTR CAA 90 bp | CCAGCTTTATTGTACTTGCAGCTTTCATGTACTCAAATGAAAACTACACAAGAAAGCATAACAGCTGCCTaGGAACTGGACCCAGGTAGA | + |
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Preference number: 5 (lower is better) Translates to: PALLYLQLSCTQMKTTQESITAA*ELDPGR Trigger: TCTACCTGGGTCCAGTTCCAAGGCAGCTGTTATGCT...TTCTTGTGTAGTTTTCATTTGAGTACATGAAAGCTGCAAGTACAATAAAGCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028356.9 ENSMUST00000074606.11 |
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| CDS-3UTR CAA 90 bp | CGTTTTACCAGCTTTATTGTACTTGCAGCTTTCATGTACTCAAATGAAAACTACAGCATAACAGCTGCCTaGGAACTGGACCCAGGTAGA | + |
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Preference number: 5 (lower is better) Translates to: RFTSFIVLAAFMYSNENYSITAA*ELDPGR Trigger: TCTACCTGGGTCCAGTTCCAAGGCAGCTGTTATGCT...GTAGTTTTCATTTGAGTACATGAAAGCTGCAAGTACAATAAAGCTGGTAAAACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028356.9 ENSMUST00000074606.11 |
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| CDS GCA 90 bp | TGTGGTTATCTGATAAATACTTCTTGTCATATGGGATTGCTGCTTTaGAAAGTGTTCCCTCCACAGAAGAGATTTCACAATCCCCTTTTC | + |
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Preference number: 5 (lower is better) Translates to: CGYLINTSCHMGLLL*KVFPPQKRFHNPLF Trigger: GAAAAGGGGATTGTGAAATCTCTTCTGTGGAGGGAACACTTTGCAAAGCAGCAATCCCATATGACAAGAAGTATTTATCAGATAACCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074606.11 |
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| CDS-3UTR CAA 90 bp | CGTTTTACCAGCTTTATTGTACTTGCAGCTTTCATGTACTCAAATGAAAACTACCTCCATTCACCTGTCTaGGTGTACAGAAAACCACAG | + |
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Preference number: 5 (lower is better) Translates to: RFTSFIVLAAFMYSNENYLHSPV*VYRKPQ Trigger: CTGTGGTTTTCTGTACACCAAGACAGGTGAATGGAG...GTAGTTTTCATTTGAGTACATGAAAGCTGCAAGTACAATAAAGCTGGTAAAACG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028356.9 ENSMUST00000074606.11 |
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| CDS-3UTR CAA 90 bp | CCAGCTTTATTGTACTTGCAGCTTTCATGTACTCAAATGAAAACTACACAAGAATATGGGATTGCTGCTTaGCAAAGTGTTCCCTCCACA | + |
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Preference number: 5 (lower is better) Translates to: PALLYLQLSCTQMKTTQEYGIAA*QSVPST Trigger: TGTGGAGGGAACACTTTGCAAAGCAGCAATCCCATA...TTCTTGTGTAGTTTTCATTTGAGTACATGAAAGCTGCAAGTACAATAAAGCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074606.11 |
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| CDS-3UTR CAA 90 bp | CGTTTTACCAGCTTTATTGTACTTGCAGCTTTCATGTACTCAAATGAAAACTACTGGTTATTTGCTGCTTaGCAAAGTGTTCCCTCCACA | + |
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Preference number: 5 (lower is better) Translates to: RFTSFIVLAAFMYSNENYWLFAA*QSVPST Trigger: TGTGGAGGGAACACTTTGCAAAGCAGCAAATAACCA...GTAGTTTTCATTTGAGTACATGAAAGCTGCAAGTACAATAAAGCTGGTAAAACG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028356.9 |
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| CDS-3UTR CAA 90 bp | CGTTTTACCAGCTTTATTGTACTTGCAGCTTTCATGTACTCAAATGAAAACTACGCGTTTTCCTCTTCATaGTGTATGCTTACCATGTCT | + |
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Preference number: 5 (lower is better) Translates to: RFTSFIVLAAFMYSNENYAFSSS*CMLTMS Trigger: AGACATGGTAAGCATACACAATGAAGAGGAAAACGC...GTAGTTTTCATTTGAGTACATGAAAGCTGCAAGTACAATAAAGCTGGTAAAACG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028356.9 ENSMUST00000074606.11 |
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| CDS-3UTR CAA 90 bp | CCAGCTTTATTGTACTTGCAGCTTTCATGTACTCAAATGAAAACTACACAAGAAACCCTTCCATCGCTTTaGCAAAGTGTCCAGTATAAA | + |
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Preference number: 5 (lower is better) Translates to: PALLYLQLSCTQMKTTQETLPSL*QSVQYK Trigger: TTTATACTGGACACTTTGCAAAAGCGATGGAAGGGT...TTCTTGTGTAGTTTTCATTTGAGTACATGAAAGCTGCAAGTACAATAAAGCTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028356.9 ENSMUST00000074606.11 |
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| CDS-3UTR CAA 90 bp | CGTTTTACCAGCTTTATTGTACTTGCAGCTTTCATGTACTCAAATGAAAACTACACCCTTCCATCGCTTTaGCAAAGTGTCCAGTATAAA | + |
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Preference number: 5 (lower is better) Translates to: RFTSFIVLAAFMYSNENYTLPSL*QSVQYK Trigger: TTTATACTGGACACTTTGCAAAAGCGATGGAAGGGT...GTAGTTTTCATTTGAGTACATGAAAGCTGCAAGTACAATAAAGCTGGTAAAACG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028356.9 ENSMUST00000074606.11 |
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| CDS-3UTR CAA 90 bp | CCAGCTTTATTGTACTTGCAGCTTTCATGTACTCAAATGAAAACTACACAAGAATCTTGTCATATGGGATaGCTGCTTTGCAAAGTGTTC | + |
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Preference number: 5 (lower is better) Translates to: PALLYLQLSCTQMKTTQESCHMG*LLCKVF Trigger: GAACACTTTGCAAAGCAGCAATCCCATATGACAAGA...TTCTTGTGTAGTTTTCATTTGAGTACATGAAAGCTGCAAGTACAATAAAGCTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074606.11 |
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| CDS-3UTR CAA 90 bp | CCAGCTTTATTGTACTTGCAGCTTTCATGTACTCAAATGAAAACTACACAAGAACACATTGATGGTTACTaGAAGAAAAGCATAACAGCT | + |
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Preference number: 5 (lower is better) Translates to: PALLYLQLSCTQMKTTQEHIDGY*KKSITA Trigger: AGCTGTTATGCTTTTCTTCAAGTAACCATCAATGTG...TTCTTGTGTAGTTTTCATTTGAGTACATGAAAGCTGCAAGTACAATAAAGCTGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028356.9 ENSMUST00000074606.11 |
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| CDS-3UTR CAA 90 bp | CGTTTTACCAGCTTTATTGTACTTGCAGCTTTCATGTACTCAAATGAAAACTACCACATTGATGGTTACTaGAAGAAAAGCATAACAGCT | + |
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Preference number: 5 (lower is better) Translates to: RFTSFIVLAAFMYSNENYHIDGY*KKSITA Trigger: AGCTGTTATGCTTTTCTTCAAGTAACCATCAATGTG...GTAGTTTTCATTTGAGTACATGAAAGCTGCAAGTACAATAAAGCTGGTAAAACG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028356.9 ENSMUST00000074606.11 |
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| CDS TCA 72 bp | AGCATAACAGCTGCCTTGGAACTGGACCCAGGTAGATaGAGGACAGTCGGCGACGATGGCAGTGGCGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: SITAALELDPGR*RTVGDDGSGEA Trigger: AGCCTCGCCACTGCCATCGTCGCCGACTGTCCTTCATCTACCTGGGTCCAGTTCCAAGGCAGCTGTTATGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028356.9 ENSMUST00000074606.11 |
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| CDS TCA 72 bp | CACTGTAAGGTGACAGTGGTGCAGGTGAAAAAGAGGTaGAGCCAGAGCGCGCGTTTCTTCTATAGAGGAACC | + |
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Preference number: 6 (lower is better) Translates to: HCKVTVVQVKKR*SQSARFFYRGT Trigger: GGTTCCTCTATAGAAGAAACGCGCGCTCTGGCTTCACCTCTTTTTCACCTGCACCACTGTCACCTTACAGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028356.9 ENSMUST00000074606.11 |
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| CDS GCA 72 bp | CGCGTTTTCCTCTTCATTGTGTATGCTTACCATGTCTaGCCCGTGGTCAGTGCACTGTTTTCTGACATCCTC | + |
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Preference number: 6 (lower is better) Translates to: RVFLFIVYAYHV*PVVSALFSDIL Trigger: GAGGATGTCAGAAAACAGTGCACTGACCACGGGGCAGACATGGTAAGCATACACAATGAAGAGGAAAACGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028356.9 ENSMUST00000074606.11 |
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| CDS GCA 72 bp | CCTAGCAGGAGATCATCTGGACCCTTCCATCGCTTTTaGAAAGTGTCCAGTATAAACGCGTTTTCCTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: PSRRSSGPFHRF*KVSSINAFSSS Trigger: TGAAGAGGAAAACGCGTTTATACTGGACACTTTGCAAAAGCGATGGAAGGGTCCAGATGATCTCCTGCTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028356.9 ENSMUST00000074606.11 |
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| CDS CAA 72 bp | TGCAAAGTGTCCAGTATAAACGCGTTTTCCTCTTCATaGTGTATGCTTACCATGTCTGCCCCGTGGTCAGTG | + |
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Preference number: 6 (lower is better) Translates to: CKVSSINAFSSS*CMLTMSAPWSV Trigger: CACTGACCACGGGGCAGACATGGTAAGCATACACAATGAAGAGGAAAACGCGTTTATACTGGACACTTTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028356.9 ENSMUST00000074606.11 |
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| CDS CCA 72 bp | TCCTCTTCATTGTGTATGCTTACCATGTCTGCCCCGTaGTCAGTGCACTGTTTTCTGACATCCTCTATGTTT | + |
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Preference number: 6 (lower is better) Translates to: SSSLCMLTMSAP*SVHCFLTSSMF Trigger: AAACATAGAGGATGTCAGAAAACAGTGCACTGACCACGGGGCAGACATGGTAAGCATACACAATGAAGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028356.9 ENSMUST00000074606.11 |
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| CDS CCA 72 bp | ACTGTGCTAGCGATCACCAGAGTCGATATTAAAATGTaGTTATTTGCTGCTTTGCAAAGTGTTCCCTCCACA | + |
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Preference number: 6 (lower is better) Translates to: TVLAITRVDIKM*LFAALQSVPST Trigger: TGTGGAGGGAACACTTTGCAAAGCAGCAAATAACCACATTTTAATATCGACTCTGGTGATCGCTAGCACAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028356.9 |
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| CDS TCA 72 bp | ACCATCTTGATCTGCCCACTTGTCGAATGTCATATTTaGATGATCATACCACTTGAAAGTTGCATCATCAGT | + |
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Preference number: 6 (lower is better) Translates to: TILICPLVECHI*MIIPLESCIIS Trigger: ACTGATGATGCAACTTTCAAGTGGTATGATCATTCAAATATGACATTCGACAAGTGGGCAGATCAAGATGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028356.9 ENSMUST00000074606.11 |
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| CDS GCA 72 bp | CCAGAGTCGATATTAAAATGTGGTTATTTGCTGCTTTaGAAAGTGTTCCCTCCACAGAAGAGATTTCACAAT | + |
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Preference number: 6 (lower is better) Translates to: PESILKCGYLLL*KVFPPQKRFHN Trigger: ATTGTGAAATCTCTTCTGTGGAGGGAACACTTTGCAAAGCAGCAAATAACCACATTTTAATATCGACTCTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028356.9 |
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| CDS GCA 72 bp | CTGATAAATACTTCTTGTCATATGGGATTGCTGCTTTaGAAAGTGTTCCCTCCACAGAAGAGATTTCACAAT | + |
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Preference number: 6 (lower is better) Translates to: LINTSCHMGLLL*KVFPPQKRFHN Trigger: ATTGTGAAATCTCTTCTGTGGAGGGAACACTTTGCAAAGCAGCAATCCCATATGACAAGAAGTATTTATCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074606.11 |
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| CDS CAA 72 bp | TCTGATAAATACTTCTTGTCATATGGGATTGCTGCTTaGCAAAGTGTTCCCTCCACAGAAGAGATTTCACAA | + |
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Preference number: 6 (lower is better) Translates to: SDKYFLSYGIAA*QSVPSTEEISQ Trigger: TTGTGAAATCTCTTCTGTGGAGGGAACACTTTGCAAAGCAGCAATCCCATATGACAAGAAGTATTTATCAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074606.11 |
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