Pregenerated sensors for CD300LG (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017309Ensembl transcript IDs: ENSMUST00000017453.12, ENSMUST00000107163.9, ENSMUST00000107164.3, ENSMUST00000123895.8
Found 166 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGACAGCTGATCCCTGGCTGCCTTGGGCTGGCTGTCACCATAGTGTaGCTGACCAGAGAGGCATCAGGAAGTGCCTACTGGGACCGTACT | + |
|
Preference number: 1 (lower is better) Translates to: RQLIPGCLGLAVTIV*LTREASGSAYWDRT Trigger: AGTACGGTCCCAGTAGGCACTTCCTGATGCCTCTCTGGTCAGGCACACTATGGTGACAGCCAGCCCAAGGCAGCCAGGGATCAGCTGTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| 3UTR GCA 90 bp | AGGGAGGTGAAGGTGGGATCTTCCGAGGATGGGAGGTGGGACTGTTaGTGGGCATCCATGCCCAGGGAATTTCCTGGAACGCACACAAAC | + |
|
Preference number: 1 (lower is better) Translates to: REVKVGSSEDGRWDC*WASMPREFPGTHTN Trigger: GTTTGTGTGCGTTCCAGGAAATTCCCTGGGCATGGATGCCCAGCAACAGTCCCACCTCCCATCCTCGGAAGATCCCACCTTCACCTCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| 3UTR CCA 90 bp | GAGGTGAAGGTGGGATCTTCCGAGGATGGGAGGTGGGACTGTTGCTaGGCATCCATGCCCAGGGAATTTCCTGGAACGCACACAAACTCA | + |
|
Preference number: 1 (lower is better) Translates to: EVKVGSSEDGRWDCC*ASMPREFPGTHTNS Trigger: TGAGTTTGTGTGCGTTCCAGGAAATTCCCTGGGCATGGATGCCCAGCAACAGTCCCACCTCCCATCCTCGGAAGATCCCACCTTCACCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| 3UTR CCA 90 bp | GATGCAGAAGAATTAGAGGGAGGTGAAGGTGGGATCTTCCGAGGATaGGAGGTGGGACTGTTGCTGGGCATCCATGCCCAGGGAATTTCC | + |
|
Preference number: 1 (lower is better) Translates to: DAEELEGGEGGIFRG*EVGLLLGIHAQGIS Trigger: GGAAATTCCCTGGGCATGGATGCCCAGCAACAGTCCCACCTCCCATCCTCGGAAGATCCCACCTTCACCTCCCTCTAATTCTTCTGCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| 3UTR TCA 90 bp | CTCAGCCTCCAGACCCCATGGAGGAGTAACCACTCTGGACAGGAATaGTATCGAGACTTCCTCCAGTGTCCTACCAAAGCAAGGGACACA | + |
|
Preference number: 1 (lower is better) Translates to: LSLQTPWRSNHSGQE*YRDFLQCPTKARDT Trigger: TGTGTCCCTTGCTTTGGTAGGACACTGGAGGAAGTCTCGATATCATTCCTGTCCAGAGTGGTTACTCCTCCATGGGGTCTGGAGGCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| 3UTR CCA 90 bp | AAGACACTTCTCCATCTGGGGCATGAAAGAGAGCCGGAAGGAAGGTaGACAGAGCCGTGGACTGTGAGTAGAACCCAAGAATTCATGAGA | + |
|
Preference number: 1 (lower is better) Translates to: KTLLHLGHEREPEGR*TEPWTVSRTQEFMR Trigger: TCTCATGAATTCTTGGGTTCTACTCACAGTCCACGGCTCTGTCCACCTTCCTTCCGGCTCTCTTTCATGCCCCAGATGGAGAAGTGTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| 3UTR TCA 90 bp | AAGGAAGGAAGGAAGGAAGGAAGGAAGATTCTAGCTAAAATGGGCTaGGGATTCATCAGACCCAAGGGTAGGAATGGCAGGGTCACTTGT | + |
|
Preference number: 1 (lower is better) Translates to: KEGRKEGRKILAKMG*GFIRPKGRNGRVTC Trigger: ACAAGTGACCCTGCCATTCCTACCCTTGGGTCTGATGAATCCTCAGCCCATTTTAGCTAGAATCTTCCTTCCTTCCTTCCTTCCTTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| 3UTR-3UTR CCA 90 bp | ACAGCTGATCCCTGGCTGCCTTGGGCTGGCTGTCACCATAGTGTGCCTGACCAGGAGCCGGAAGGAAGGTaGACAGAGCCGTGGACTGTG | + |
|
Preference number: 2 (lower is better) Translates to: TADPWLPWAGCHHSVPDQEPEGR*TEPWTV Trigger: CACAGTCCACGGCTCTGTCCACCTTCCTTCCGGCTC...CTGGTCAGGCACACTATGGTGACAGCCAGCCCAAGGCAGCCAGGGATCAGCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| 3UTR-3UTR CCA 90 bp | TGGCTGCCTTGGGCTGGCTGTCACCATAGTGTGCCTGACCAGAGAGGCATCAGGCACTTGTCAGAACTGTaGAGTCCCAGGCCCTGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: WLPWAGCHHSVPDQRGIRHLSEL*SPRPCP Trigger: AGGGCAGGGCCTGGGACTCCACAGTTCTGACAAGTG...CCTGATGCCTCTCTGGTCAGGCACACTATGGTGACAGCCAGCCCAAGGCAGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| 3UTR-3UTR CCA 90 bp | GATCCCTGGCTGCCTTGGGCTGGCTGTCACCATAGTGTGCCTGACCAGAGAGGCGGAGGTTCCAGCCTCTaGCTGGACTTGTTAAGTACC | + |
|
Preference number: 2 (lower is better) Translates to: DPWLPWAGCHHSVPDQRGGGSSL*LDLLST Trigger: GGTACTTAACAAGTCCAGCCAGAGGCTGGAACCTCC...GCCTCTCTGGTCAGGCACACTATGGTGACAGCCAGCCCAAGGCAGCCAGGGATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| 3UTR CAA 90 bp | GAGGGAGGTGAAGGTGGGATCTTCCGAGGATGGGAGGTGGGACTGTaGCTGGGCATCCATGCCCAGGGAATTTCCTGGAACGCACACAAA | + |
|
Preference number: 2 (lower is better) Translates to: EGGEGGIFRGWEVGL*LGIHAQGISWNAHK Trigger: TTTGTGTGCGTTCCAGGAAATTCCCTGGGCATGGATGCCCAGCAACAGTCCCACCTCCCATCCTCGGAAGATCCCACCTTCACCTCCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| 3UTR-3UTR GCA 90 bp | ACAGCTGATCCCTGGCTGCCTTGGGCTGGCTGTCACCATAGTGTGCCTGACCAGCCAGGGATTAGAATATaGGGGAGGTTCCAGCCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: TADPWLPWAGCHHSVPDQPGIRI*GRFQPL Trigger: CAGAGGCTGGAACCTCCCGCATATTCTAATCCCTGG...CTGGTCAGGCACACTATGGTGACAGCCAGCCCAAGGCAGCCAGGGATCAGCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| 3UTR-3UTR CCA 90 bp | ACAGCTGATCCCTGGCTGCCTTGGGCTGGCTGTCACCATAGTGTGCCTGACCAGGGAGGTTCCAGCCTCTaGCTGGACTTGTTAAGTACC | + |
|
Preference number: 2 (lower is better) Translates to: TADPWLPWAGCHHSVPDQGGSSL*LDLLST Trigger: GGTACTTAACAAGTCCAGCCAGAGGCTGGAACCTCC...CTGGTCAGGCACACTATGGTGACAGCCAGCCCAAGGCAGCCAGGGATCAGCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| 3UTR-3UTR CCA 90 bp | GCTGTCACCATAGTGTGCCTGACCAGAGAGGCATCAGGAAGTGCCTACTGGGACAGGTGGGACTGTTGCTaGGCATCCATGCCCAGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: AVTIVCLTREASGSAYWDRWDCC*ASMPRE Trigger: TTCCCTGGGCATGGATGCCCAGCAACAGTCCCACCT...GTCCCAGTAGGCACTTCCTGATGCCTCTCTGGTCAGGCACACTATGGTGACAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| 3UTR-3UTR TCA 90 bp | GCTGTCACCATAGTGTGCCTGACCAGAGAGGCATCAGGAAGTGCCTACTGGGACTCTCCATCTGGGGCATaGAAGAGAGCCGGAAGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: AVTIVCLTREASGSAYWDSPSGA*KRAGRK Trigger: CTTCCTTCCGGCTCTCTTTCATGCCCCAGATGGAGA...GTCCCAGTAGGCACTTCCTGATGCCTCTCTGGTCAGGCACACTATGGTGACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| 3UTR-3UTR CCA 90 bp | TTGCTGGGCATCCATGCCCAGGGAATTTCCTGGAACGCACACAAACTCAGCCTTGAGCCGGAAGGAAGGTaGACAGAGCCGTGGACTGTG | + |
|
Preference number: 2 (lower is better) Translates to: LLGIHAQGISWNAHKLSLEPEGR*TEPWTV Trigger: CACAGTCCACGGCTCTGTCCACCTTCCTTCCGGCTC...AAGGCTGAGTTTGTGTGCGTTCCAGGAAATTCCCTGGGCATGGATGCCCAGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| 3UTR-3UTR TCA 90 bp | TCAGACCCAAGGGTAGGAATGGCAGGGTCACTTGTCAGAACTGTGGAGTCCCAGTCTCCATCTGGGGCATaGAAGAGAGCCGGAAGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: SDPRVGMAGSLVRTVESQSPSGA*KRAGRK Trigger: CTTCCTTCCGGCTCTCTTTCATGCCCCAGATGGAGA...CTGGGACTCCACAGTTCTGACAAGTGACCCTGCCATTCCTACCCTTGGGTCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| 3UTR-3UTR TCA 90 bp | GCTGTCACCATAGTGTGCCTGACCAGAGAGGCATCAGGAAGTGCCTACTGGGACAGAATTAGAGGGAGGTaGAGGTGGGATCTTCCGAGG | + |
|
Preference number: 2 (lower is better) Translates to: AVTIVCLTREASGSAYWDRIRGR*RWDLPR Trigger: CCTCGGAAGATCCCACCTTCACCTCCCTCTAATTCT...GTCCCAGTAGGCACTTCCTGATGCCTCTCTGGTCAGGCACACTATGGTGACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| 3UTR-3UTR CCA 90 bp | TCTTCCGAGGATGGGAGGTGGGACTGTTGCTGGGCATCCATGCCCAGGGAATTTAGGTGGACAGAGCCGTaGACTGTGAGTAGAACCCAA | + |
|
Preference number: 2 (lower is better) Translates to: SSEDGRWDCCWASMPREFRWTEP*TVSRTQ Trigger: TTGGGTTCTACTCACAGTCCACGGCTCTGTCCACCT...AAATTCCCTGGGCATGGATGCCCAGCAACAGTCCCACCTCCCATCCTCGGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| 3UTR-3UTR TCA 90 bp | TCAGACCCAAGGGTAGGAATGGCAGGGTCACTTGTCAGAACTGTGGAGTCCCAGAGAATTAGAGGGAGGTaGAGGTGGGATCTTCCGAGG | + |
|
Preference number: 2 (lower is better) Translates to: SDPRVGMAGSLVRTVESQRIRGR*RWDLPR Trigger: CCTCGGAAGATCCCACCTTCACCTCCCTCTAATTCT...CTGGGACTCCACAGTTCTGACAAGTGACCCTGCCATTCCTACCCTTGGGTCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| 3UTR-3UTR TCA 90 bp | ACAGCTGATCCCTGGCTGCCTTGGGCTGGCTGTCACCATAGTGTGCCTGACCAGCTCCTCCATAGCAATTaGTGCAGAAGAATTAGAGGG | + |
|
Preference number: 2 (lower is better) Translates to: TADPWLPWAGCHHSVPDQLLHSN*CRRIRG Trigger: CCCTCTAATTCTTCTGCATCAATTGCTATGGAGGAG...CTGGTCAGGCACACTATGGTGACAGCCAGCCCAAGGCAGCCAGGGATCAGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| 3UTR-3UTR CCA 90 bp | CCCCATGGAGGAGTAACCACTCTGGACAGGAATGATATCGAGACTTCCTCCAGTAGGTGGGACTGTTGCTaGGCATCCATGCCCAGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: PHGGVTTLDRNDIETSSSRWDCC*ASMPRE Trigger: TTCCCTGGGCATGGATGCCCAGCAACAGTCCCACCT...ACTGGAGGAAGTCTCGATATCATTCCTGTCCAGAGTGGTTACTCCTCCATGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| 3UTR CAA 90 bp | TCCCAGGGATTAGAATATGCGGGAGGTTCCAGCCTCTGGCTGGACTaGTTAAGTACCATCCGGGCTTCAGGGACCAAGACACTTCTCCAT | + |
|
Preference number: 2 (lower is better) Translates to: SQGLEYAGGSSLWLD*LSTIRASGTKTLLH Trigger: ATGGAGAAGTGTCTTGGTCCCTGAAGCCCGGATGGTACTTAACAAGTCCAGCCAGAGGCTGGAACCTCCCGCATATTCTAATCCCTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| 3UTR-3UTR GCA 90 bp | TTGCTGGGCATCCATGCCCAGGGAATTTCCTGGAACGCACACAAACTCAGCCTTCCAGGGATTAGAATATaGGGGAGGTTCCAGCCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: LLGIHAQGISWNAHKLSLPGIRI*GRFQPL Trigger: CAGAGGCTGGAACCTCCCGCATATTCTAATCCCTGG...AAGGCTGAGTTTGTGTGCGTTCCAGGAAATTCCCTGGGCATGGATGCCCAGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| 3UTR-3UTR CCA 90 bp | TCAGAACTGTGGAGTCCCAGGCCCTGCCCTAGAGATGGTTTGGTGAGTCTTGATAGGTGGACAGAGCCGTaGACTGTGAGTAGAACCCAA | + |
|
Preference number: 2 (lower is better) Translates to: SELWSPRPCPRDGLVSLDRWTEP*TVSRTQ Trigger: TTGGGTTCTACTCACAGTCCACGGCTCTGTCCACCT...ATCAAGACTCACCAAACCATCTCTAGGGCAGGGCCTGGGACTCCACAGTTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| 3UTR-3UTR CCA 90 bp | TCAGAACTGTGGAGTCCCAGGCCCTGCCCTAGAGATGGTTTGGTGAGTCTTGATGGAGGTTCCAGCCTCTaGCTGGACTTGTTAAGTACC | + |
|
Preference number: 2 (lower is better) Translates to: SELWSPRPCPRDGLVSLDGGSSL*LDLLST Trigger: GGTACTTAACAAGTCCAGCCAGAGGCTGGAACCTCC...ATCAAGACTCACCAAACCATCTCTAGGGCAGGGCCTGGGACTCCACAGTTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| 3UTR-3UTR CCA 90 bp | TGGACAGGAATGATATCGAGACTTCCTCCAGTGTCCTACCAAAGCAAGGGACACAGGTGGGACTGTTGCTaGGCATCCATGCCCAGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: WTGMISRLPPVSYQSKGHRWDCC*ASMPRE Trigger: TTCCCTGGGCATGGATGCCCAGCAACAGTCCCACCT...GTGTCCCTTGCTTTGGTAGGACACTGGAGGAAGTCTCGATATCATTCCTGTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| 3UTR-3UTR GCA 90 bp | GAATGGCAGGGTCACTTGTCAGAACTGTGGAGTCCCAGGCCCTGCCCTAGAGATTCTAAGAGGCCAGGATaGAGGTGTTTCATAGACACA | + |
|
Preference number: 2 (lower is better) Translates to: EWQGHLSELWSPRPCPRDSKRPG*RCFIDT Trigger: TGTGTCTATGAAACACCTGCATCCTGGCCTCTTAGA...ATCTCTAGGGCAGGGCCTGGGACTCCACAGTTCTGACAAGTGACCCTGCCATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| 3UTR-3UTR GCA 90 bp | GCTGAGAAAGTTTATTGTACAAAGTTCGTAGAACACGGAGGGATGCTTATGACGCAGCTGATCCCTGGCTaGCTTGGGCTGGCTGTCACC | + |
|
Preference number: 2 (lower is better) Translates to: AEKVYCTKFVEHGGMLMTQLIPG*LGLAVT Trigger: GGTGACAGCCAGCCCAAGGCAGCCAGGGATCAGCTG...CGTCATAAGCATCCCTCCGTGTTCTACGAACTTTGTACAATAAACTTTCTCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| 3UTR-3UTR TCA 90 bp | ACTCTGGACAGGAATGATATCGAGACTTCCTCCAGTGTCCTACCAAAGCAAGGGCTAGAGATGGTTTGGTaGGTCTTGATGGGTCTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: TLDRNDIETSSSVLPKQGLEMVW*VLMGLQ Trigger: CTGCAGACCCATCAAGACTCACCAAACCATCTCTAG...CCCTTGCTTTGGTAGGACACTGGAGGAAGTCTCGATATCATTCCTGTCCAGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| 3UTR-3UTR CCA 90 bp | GCTGAGAAAGTTTATTGTACAAAGTTCGTAGAACACGGAGGGATGCTTATGACGGAGCCGGAAGGAAGGTaGACAGAGCCGTGGACTGTG | + |
|
Preference number: 2 (lower is better) Translates to: AEKVYCTKFVEHGGMLMTEPEGR*TEPWTV Trigger: CACAGTCCACGGCTCTGTCCACCTTCCTTCCGGCTC...CGTCATAAGCATCCCTCCGTGTTCTACGAACTTTGTACAATAAACTTTCTCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| 3UTR-3UTR CCA 90 bp | GCTGAGAAAGTTTATTGTACAAAGTTCGTAGAACACGGAGGGATGCTTATGACGGAGACAGCTGATCCCTaGCTGCCTTGGGCTGGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: AEKVYCTKFVEHGGMLMTETADP*LPWAGC Trigger: ACAGCCAGCCCAAGGCAGCCAGGGATCAGCTGTCTC...CGTCATAAGCATCCCTCCGTGTTCTACGAACTTTGTACAATAAACTTTCTCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| 3UTR-3UTR CCA 90 bp | CCCTACATTTCTGTTTTATATTCTGAACACCTCCCTTCCCAACATCTTACTTTTCACTTGTCAGAACTGTaGAGTCCCAGGCCCTGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: PYISVLYSEHLPSQHLTFHLSEL*SPRPCP Trigger: AGGGCAGGGCCTGGGACTCCACAGTTCTGACAAGTG...AAAAGTAAGATGTTGGGAAGGGAGGTGTTCAGAATATAAAACAGAAATGTAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| 3UTR-3UTR CCA 90 bp | CCCTACATTTCTGTTTTATATTCTGAACACCTCCCTTCCCAACATCTTACTTTTGATCCCTGGCTGCCTTaGGCTGGCTGTCACCATAGT | + |
|
Preference number: 2 (lower is better) Translates to: PYISVLYSEHLPSQHLTFDPWLP*AGCHHS Trigger: ACTATGGTGACAGCCAGCCCAAGGCAGCCAGGGATC...AAAAGTAAGATGTTGGGAAGGGAGGTGTTCAGAATATAAAACAGAAATGTAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| 3UTR CAA 90 bp | CACTTGTCAGAACTGTGGAGTCCCAGGCCCTGCCCTAGAGATGGTTaGGTGAGTCTTGATGGGTCTGCAGAATTTTGTTTTAATTATTTT | + |
|
Preference number: 2 (lower is better) Translates to: HLSELWSPRPCPRDG*VSLDGSAEFCFNYF Trigger: AAAATAATTAAAACAAAATTCTGCAGACCCATCAAGACTCACCAAACCATCTCTAGGGCAGGGCCTGGGACTCCACAGTTCTGACAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| 3UTR-3UTR TCA 90 bp | GAAAGTTTATTGTACAAAGTTCGTAGAACACGGAGGGATGCTTATGACGAGACAGGGACCGTACTGTCATaGTCTAGGTCTAGGAAGCAT | + |
|
Preference number: 2 (lower is better) Translates to: ESLLYKVRRTRRDAYDETGTVLS*SRSRKH Trigger: ATGCTTCCTAGACCTAGATCATGACAGTACGGTCCC...TGTCTCGTCATAAGCATCCCTCCGTGTTCTACGAACTTTGTACAATAAACTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| 3UTR-3UTR GCA 90 bp | GCTGAGAAAGTTTATTGTACAAAGTTCGTAGAACACGGAGGGATGCTTATGACGTCTAAGAGGCCAGGATaGAGGTGTTTCATAGACACA | + |
|
Preference number: 2 (lower is better) Translates to: AEKVYCTKFVEHGGMLMTSKRPG*RCFIDT Trigger: TGTGTCTATGAAACACCTGCATCCTGGCCTCTTAGA...CGTCATAAGCATCCCTCCGTGTTCTACGAACTTTGTACAATAAACTTTCTCAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| 3UTR CAA 90 bp | CAAGGTTTGGTGAGGTTATATATGATCCTAGAAACAGCACTTCTTTaGTATTCTCCCTACATTTCTGTTTTATATTCTGAACACCTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: QGLVRLYMILETALL*YSPYISVLYSEHLP Trigger: AGGGAGGTGTTCAGAATATAAAACAGAAATGTAGGGAGAATACAAAAGAAGTGCTGTTTCTAGGATCATATATAACCTCACCAAACCTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| 3UTR-3UTR CAA 90 bp | GAATGGCAGGGTCACTTGTCAGAACTGTGGAGTCCCAGGCCCTGCCCTAGAGATTGGGAGGTGGGACTGTaGCTGGGCATCCATGCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: EWQGHLSELWSPRPCPRDWEVGL*LGIHAQ Trigger: CTGGGCATGGATGCCCAGCAACAGTCCCACCTCCCA...ATCTCTAGGGCAGGGCCTGGGACTCCACAGTTCTGACAAGTGACCCTGCCATTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| 3UTR GCA 72 bp | ATCCCTGGCTGCCTTGGGCTGGCTGTCACCATAGTGTaGCTGACCAGAGAGGCATCAGGAAGTGCCTACTGG | + |
|
Preference number: 3 (lower is better) Translates to: IPGCLGLAVTIV*LTREASGSAYW Trigger: CCAGTAGGCACTTCCTGATGCCTCTCTGGTCAGGCACACTATGGTGACAGCCAGCCCAAGGCAGCCAGGGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| 3UTR CCA 72 bp | CTCCAGTGTCCTACCAAAGCAAGGGACACAGGGCCTTaGGGAAGGAGGATGGAGAGACAGCTGATCCCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: LQCPTKARDTGP*GRRMERQLIPG Trigger: GCCAGGGATCAGCTGTCTCTCCATCCTCCTTCCCCAAGGCCCTGTGTCCCTTGCTTTGGTAGGACACTGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| 3UTR GCA 72 bp | CCGAGGATGGGAGGTGGGACTGTTGCTGGGCATCCATaGCCAGGGAATTTCCTGGAACGCACACAAACTCAG | + |
|
Preference number: 3 (lower is better) Translates to: PRMGGGTVAGHP*PGNFLERTQTQ Trigger: CTGAGTTTGTGTGCGTTCCAGGAAATTCCCTGGGCATGGATGCCCAGCAACAGTCCCACCTCCCATCCTCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| 3UTR GCA 72 bp | AAGGTGGGATCTTCCGAGGATGGGAGGTGGGACTGTTaGTGGGCATCCATGCCCAGGGAATTTCCTGGAACG | + |
|
Preference number: 3 (lower is better) Translates to: KVGSSEDGRWDC*WASMPREFPGT Trigger: CGTTCCAGGAAATTCCCTGGGCATGGATGCCCAGCAACAGTCCCACCTCCCATCCTCGGAAGATCCCACCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| 3UTR CCA 72 bp | CCATCCGGGCTTCAGGGACCAAGACACTTCTCCATCTaGGGCATGAAAGAGAGCCGGAAGGAAGGTGGACAG | + |
|
Preference number: 3 (lower is better) Translates to: PSGLQGPRHFSI*GMKESRKEGGQ Trigger: CTGTCCACCTTCCTTCCGGCTCTCTTTCATGCCCCAGATGGAGAAGTGTCTTGGTCCCTGAAGCCCGGATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| 3UTR CCA 72 bp | AAGGAGGATGGAGAGACAGCTGATCCCTGGCTGCCTTaGGCTGGCTGTCACCATAGTGTGCCTGACCAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: KEDGETADPWLP*AGCHHSVPDQR Trigger: TCTCTGGTCAGGCACACTATGGTGACAGCCAGCCCAAGGCAGCCAGGGATCAGCTGTCTCTCCATCCTCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| 3UTR GCA 72 bp | CAGGGTCACTTGTCAGAACTGTGGAGTCCCAGGCCCTaGCCTAGAGATGGTTTGGTGAGTCTTGATGGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: QGHLSELWSPRP*PRDGLVSLDGS Trigger: AGACCCATCAAGACTCACCAAACCATCTCTAGGGCAGGGCCTGGGACTCCACAGTTCTGACAAGTGACCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| 3UTR CCA 72 bp | CTCCATCTGGGGCATGAAAGAGAGCCGGAAGGAAGGTaGACAGAGCCGTGGACTGTGAGTAGAACCCAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: LHLGHEREPEGR*TEPWTVSRTQE Trigger: TTCTTGGGTTCTACTCACAGTCCACGGCTCTGTCCACCTTCCTTCCGGCTCTCTTTCATGCCCCAGATGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| 3UTR TCA 72 bp | CAGACCCCATGGAGGAGTAACCACTCTGGACAGGAATaGTATCGAGACTTCCTCCAGTGTCCTACCAAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: QTPWRSNHSGQE*YRDFLQCPTKA Trigger: TGCTTTGGTAGGACACTGGAGGAAGTCTCGATATCATTCCTGTCCAGAGTGGTTACTCCTCCATGGGGTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| 3UTR-3UTR CAA 90 bp | TGGACAGGAATGATATCGAGACTTCCTCCAGTGTCCTACCAAAGCAAGGGACACTGCCCTAGAGATGGTTaGGTGAGTCTTGATGGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: WTGMISRLPPVSYQSKGHCPRDG*VSLDGS Trigger: AGACCCATCAAGACTCACCAAACCATCTCTAGGGCA...GTGTCCCTTGCTTTGGTAGGACACTGGAGGAAGTCTCGATATCATTCCTGTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| 3UTR-3UTR CAA 90 bp | CCCTACATTTCTGTTTTATATTCTGAACACCTCCCTTCCCAACATCTTACTTTTTGCCCTAGAGATGGTTaGGTGAGTCTTGATGGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: PYISVLYSEHLPSQHLTFCPRDG*VSLDGS Trigger: AGACCCATCAAGACTCACCAAACCATCTCTAGGGCA...AAAAGTAAGATGTTGGGAAGGGAGGTGTTCAGAATATAAAACAGAAATGTAGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| 3UTR-3UTR CAA 90 bp | GCTGAGAAAGTTTATTGTACAAAGTTCGTAGAACACGGAGGGATGCTTATGACGGAAACAGCACTTCTTTaGTATTCTCCCTACATTTCT | + |
|
Preference number: 3 (lower is better) Translates to: AEKVYCTKFVEHGGMLMTETALL*YSPYIS Trigger: AGAAATGTAGGGAGAATACAAAAGAAGTGCTGTTTC...CGTCATAAGCATCCCTCCGTGTTCTACGAACTTTGTACAATAAACTTTCTCAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS-3UTR GCA 90 bp | GATCCCTGGCTGCCTTGGGCTGGCTGTCACCATAGTGTGCCTGACCAGAGAGGCGGACTGGGGCCATCATaGGGACCATCGGGATGGACA | + |
|
Preference number: 4 (lower is better) Translates to: DPWLPWAGCHHSVPDQRGGLGPS*GPSGWT Trigger: TGTCCATCCCGATGGTCCGCATGATGGCCCCAGTCC...GCCTCTCTGGTCAGGCACACTATGGTGACAGCCAGCCCAAGGCAGCCAGGGATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS-3UTR TCA 90 bp | TGGCTGCCTTGGGCTGGCTGTCACCATAGTGTGCCTGACCAGAGAGGCATCAGGGCTGGGGTCGCTGTGTaGGGAGAGCTCCCAGCATAT | + |
|
Preference number: 4 (lower is better) Translates to: WLPWAGCHHSVPDQRGIRAGVAV*GELPAY Trigger: ATATGCTGGGAGCTCTCCTCACACAGCGACCCCAGC...CCTGATGCCTCTCTGGTCAGGCACACTATGGTGACAGCCAGCCCAAGGCAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS-3UTR CCA 90 bp | TGGCTGCCTTGGGCTGGCTGTCACCATAGTGTGCCTGACCAGAGAGGCATCAGGCAGGGCTTCATAACCTaGGAGCACCAGGCAGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: WLPWAGCHHSVPDQRGIRQGFIT*EHQAAP Trigger: TGGGGCTGCCTGGTGCTCCCAGGTTATGAAGCCCTG...CCTGATGCCTCTCTGGTCAGGCACACTATGGTGACAGCCAGCCCAAGGCAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS-3UTR GCA 90 bp | ACAGCTGATCCCTGGCTGCCTTGGGCTGGCTGTCACCATAGTGTGCCTGACCAGAGTCTGCCAGGCTTTTaGCTTGGGCTGCAGGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TADPWLPWAGCHHSVPDQSLPGF*LGLQAP Trigger: AGGAGCCTGCAGCCCAAGGCAAAAGCCTGGCAGACT...CTGGTCAGGCACACTATGGTGACAGCCAGCCCAAGGCAGCCAGGGATCAGCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107164.3 |
||
| CDS-3UTR CCA 90 bp | GAATGGCAGGGTCACTTGTCAGAACTGTGGAGTCCCAGGCCCTGCCCTAGAGATGGGCAGCCAGACGACTaGACGGGAGCTCCCTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: EWQGHLSELWSPRPCPRDGQPDD*TGAPWK Trigger: TTTCCAGGGAGCTCCCGTCCAGTCGTCTGGCTGCCC...ATCTCTAGGGCAGGGCCTGGGACTCCACAGTTCTGACAAGTGACCCTGCCATTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017453.12 |
||
| CDS-3UTR CCA 90 bp | GCTGTCACCATAGTGTGCCTGACCAGAGAGGCATCAGGAAGTGCCTACTGGGACAGCCCTGGAGTCCTGTaGCGTGGTAAGGGGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AVTIVCLTREASGSAYWDSPGVL*RGKGQP Trigger: TGGCTGCCCCTTACCACGCCACAGGACTCCAGGGCT...GTCCCAGTAGGCACTTCCTGATGCCTCTCTGGTCAGGCACACTATGGTGACAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS-3UTR GCA 90 bp | GAATGGCAGGGTCACTTGTCAGAACTGTGGAGTCCCAGGCCCTGCCCTAGAGATGGACTGGGGCCATCATaGGGACCATCGGGATGGACA | + |
|
Preference number: 4 (lower is better) Translates to: EWQGHLSELWSPRPCPRDGLGPS*GPSGWT Trigger: TGTCCATCCCGATGGTCCGCATGATGGCCCCAGTCC...ATCTCTAGGGCAGGGCCTGGGACTCCACAGTTCTGACAAGTGACCCTGCCATTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS-3UTR GCA 90 bp | TGGCTGCCTTGGGCTGGCTGTCACCATAGTGTGCCTGACCAGAGAGGCATCAGGGTCCAGGGAACGAGCTaGCTCTTCCTCCTCTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: WLPWAGCHHSVPDQRGIRVQGTS*LFLLCR Trigger: TCTACAGAGGAGGAAGAGGCAGCTCGTTCCCTGGAC...CCTGATGCCTCTCTGGTCAGGCACACTATGGTGACAGCCAGCCCAAGGCAGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS-3UTR GCA 90 bp | GGGACTGTTGCTGGGCATCCATGCCCAGGGAATTTCCTGGAACGCACACAAACTAACCTGGGAGGTTCCTaGAGATCGGGCTGGGGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: GTVAGHPCPGNFLERTQTNLGGS*RSGWGR Trigger: GCGACCCCAGCCCGATCTGCAGGAACCTCCCAGGTT...AGTTTGTGTGCGTTCCAGGAAATTCCCTGGGCATGGATGCCCAGCAACAGTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS-3UTR CCA 90 bp | ACAGCTGATCCCTGGCTGCCTTGGGCTGGCTGTCACCATAGTGTGCCTGACCAGTGGACACACTGGGCTTaGAGACACTGCTGGCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: TADPWLPWAGCHHSVPDQWTHWA*RHCWLQ Trigger: CTGTAGCCAGCAGTGTCTCCAAGCCCAGTGTGTCCA...CTGGTCAGGCACACTATGGTGACAGCCAGCCCAAGGCAGCCAGGGATCAGCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS-3UTR TCA 90 bp | GGGACTGTTGCTGGGCATCCATGCCCAGGGAATTTCCTGGAACGCACACAAACTGCTGGGGTCGCTGTGTaGGGAGAGCTCCCAGCATAT | + |
|
Preference number: 4 (lower is better) Translates to: GTVAGHPCPGNFLERTQTAGVAV*GELPAY Trigger: ATATGCTGGGAGCTCTCCTCACACAGCGACCCCAGC...AGTTTGTGTGCGTTCCAGGAAATTCCCTGGGCATGGATGCCCAGCAACAGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS-3UTR CCA 90 bp | GCTGTCACCATAGTGTGCCTGACCAGAGAGGCATCAGGAAGTGCCTACTGGGACTCGGGATGGACACACTaGGCTTGGAGACACTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AVTIVCLTREASGSAYWDSGWTH*AWRHCW Trigger: CCAGCAGTGTCTCCAAGCCCAGTGTGTCCATCCCGA...GTCCCAGTAGGCACTTCCTGATGCCTCTCTGGTCAGGCACACTATGGTGACAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS-3UTR CCA 90 bp | TCTTCCGAGGATGGGAGGTGGGACTGTTGCTGGGCATCCATGCCCAGGGAATTTTGCGGACCATCGGGATaGACACACTGGGCTTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSEDGRWDCCWASMPREFCGPSG*THWAWR Trigger: TCTCCAAGCCCAGTGTGTCCATCCCGATGGTCCGCA...AAATTCCCTGGGCATGGATGCCCAGCAACAGTCCCACCTCCCATCCTCGGAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS-3UTR CCA 90 bp | ACAGCTGATCCCTGGCTGCCTTGGGCTGGCTGTCACCATAGTGTGCCTGACCAGCAAGAGTATCAGGACTaGGGCCATCATGCGGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: TADPWLPWAGCHHSVPDQQEYQD*GHHADH Trigger: ATGGTCCGCATGATGGCCCCAGTCCTGATACTCTTG...CTGGTCAGGCACACTATGGTGACAGCCAGCCCAAGGCAGCCAGGGATCAGCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS-3UTR CCA 90 bp | TCTTCCGAGGATGGGAGGTGGGACTGTTGCTGGGCATCCATGCCCAGGGAATTTGTGACGACTGTCGGGTaGAGACCAGGAGAAGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSEDGRWDCCWASMPREFVTTVG*RPGEAG Trigger: TCCAGCTTCTCCTGGTCTCCACCCGACAGTCGTCAC...AAATTCCCTGGGCATGGATGCCCAGCAACAGTCCCACCTCCCATCCTCGGAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107163.9 |
||
| CDS-3UTR GCA 90 bp | GATCCCTGGCTGCCTTGGGCTGGCTGTCACCATAGTGTGCCTGACCAGAGAGGCCACCAATACTTCCTGTaGTCCTTCATCTTCTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: DPWLPWAGCHHSVPDQRGHQYFL*SFIFST Trigger: CGTGGAGAAGATGAAGGAGCACAGGAAGTATTGGTG...GCCTCTCTGGTCAGGCACACTATGGTGACAGCCAGCCCAAGGCAGCCAGGGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS-3UTR GCA 90 bp | GGACTTGTTAAGTACCATCCGGGCTTCAGGGACCAAGACACTTCTCCATCTGGGTGGACGGGAGCTCCCTaGATGAGGAGAGGTCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GLVKYHPGFRDQDTSPSGWTGAP*MRRGRC Trigger: ACAGCGACCTCTCCTCATGCAGGGAGCTCCCGTCCA...CCCAGATGGAGAAGTGTCTTGGTCCCTGAAGCCCGGATGGTACTTAACAAGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS-3UTR GCA 90 bp | TTGCTGGGCATCCATGCCCAGGGAATTTCCTGGAACGCACACAAACTCAGCCTTTGGACGGGAGCTCCCTaGATGAGGAGAGGTCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLGIHAQGISWNAHKLSLWTGAP*MRRGRC Trigger: ACAGCGACCTCTCCTCATGCAGGGAGCTCCCGTCCA...AAGGCTGAGTTTGTGTGCGTTCCAGGAAATTCCCTGGGCATGGATGCCCAGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS-3UTR CCA 90 bp | CTCTTCCCAGGGATTAGAATATGCGGGAGGTTCCAGCCTCTGGCTGGACTTGTTCAGGGCTTCATAACCTaGGAGCACCAGGCAGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LFPGIRICGRFQPLAGLVQGFIT*EHQAAP Trigger: TGGGGCTGCCTGGTGCTCCCAGGTTATGAAGCCCTG...AACAAGTCCAGCCAGAGGCTGGAACCTCCCGCATATTCTAATCCCTGGGAAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS-3UTR CCA 90 bp | ACAGCTGATCCCTGGCTGCCTTGGGCTGGCTGTCACCATAGTGTGCCTGACCAGTGGACGGGAGCTCCCTaGAAAGACAATGAGTGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: TADPWLPWAGCHHSVPDQWTGAP*KDNECN Trigger: GTTACACTCATTGTCTTTCCAGGGAGCTCCCGTCCA...CTGGTCAGGCACACTATGGTGACAGCCAGCCCAAGGCAGCCAGGGATCAGCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017453.12 |
||
| CDS-3UTR CCA 90 bp | CCAAGAATTCATGAGAACTCAGCTGTTCAGCTTCACAATCCCTGGCCGACCACGAGCCCTGGAGTCCTGTaGCGTGGTAAGGGGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PRIHENSAVQLHNPWPTTSPGVL*RGKGQP Trigger: TGGCTGCCCCTTACCACGCCACAGGACTCCAGGGCT...CGTGGTCGGCCAGGGATTGTGAAGCTGAACAGCTGAGTTCTCATGAATTCTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS-3UTR CCA 90 bp | GCTGTCACCATAGTGTGCCTGACCAGAGAGGCATCAGGAAGTGCCTACTGGGACTGGACACACTGGGCTTaGAGACACTGCTGGCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: AVTIVCLTREASGSAYWDWTHWA*RHCWLQ Trigger: CTGTAGCCAGCAGTGTCTCCAAGCCCAGTGTGTCCA...GTCCCAGTAGGCACTTCCTGATGCCTCTCTGGTCAGGCACACTATGGTGACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS-3UTR CCA 90 bp | TCAGACCCAAGGGTAGGAATGGCAGGGTCACTTGTCAGAACTGTGGAGTCCCAGTCGGGATGGACACACTaGGCTTGGAGACACTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SDPRVGMAGSLVRTVESQSGWTH*AWRHCW Trigger: CCAGCAGTGTCTCCAAGCCCAGTGTGTCCATCCCGA...CTGGGACTCCACAGTTCTGACAAGTGACCCTGCCATTCCTACCCTTGGGTCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS-3UTR GCA 90 bp | ACTCTGGACAGGAATGATATCGAGACTTCCTCCAGTGTCCTACCAAAGCAAGGGAACCTGGGAGGTTCCTaGAGATCGGGCTGGGGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: TLDRNDIETSSSVLPKQGNLGGS*RSGWGR Trigger: GCGACCCCAGCCCGATCTGCAGGAACCTCCCAGGTT...CCCTTGCTTTGGTAGGACACTGGAGGAAGTCTCGATATCATTCCTGTCCAGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS-3UTR CCA 90 bp | ACTCTGGACAGGAATGATATCGAGACTTCCTCCAGTGTCCTACCAAAGCAAGGGAGCCCTGGAGTCCTGTaGCGTGGTAAGGGGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TLDRNDIETSSSVLPKQGSPGVL*RGKGQP Trigger: TGGCTGCCCCTTACCACGCCACAGGACTCCAGGGCT...CCCTTGCTTTGGTAGGACACTGGAGGAAGTCTCGATATCATTCCTGTCCAGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS-3UTR CCA 90 bp | GAATGGCAGGGTCACTTGTCAGAACTGTGGAGTCCCAGGCCCTGCCCTAGAGATATATGGAGAGATTCCTaGGGGAACCTGGGAGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: EWQGHLSELWSPRPCPRDIWRDS*GNLGGS Trigger: GGAACCTCCCAGGTTCCCCCAGGAATCTCTCCATAT...ATCTCTAGGGCAGGGCCTGGGACTCCACAGTTCTGACAAGTGACCCTGCCATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS-3UTR TCA 90 bp | GCTGTCACCATAGTGTGCCTGACCAGAGAGGCATCAGGAAGTGCCTACTGGGACTCCTCCTCTGTAGACTaGCTGAGGTTCTGTGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: AVTIVCLTREASGSAYWDSSSVD*LRFCVS Trigger: TGAGACACAGAACCTCAGTCAGTCTACAGAGGAGGA...GTCCCAGTAGGCACTTCCTGATGCCTCTCTGGTCAGGCACACTATGGTGACAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS-3UTR GCA 90 bp | TCAGAACTGTGGAGTCCCAGGCCCTGCCCTAGAGATGGTTTGGTGAGTCTTGATGTCCAGGGAACGAGCTaGCTCTTCCTCCTCTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SELWSPRPCPRDGLVSLDVQGTS*LFLLCR Trigger: TCTACAGAGGAGGAAGAGGCAGCTCGTTCCCTGGAC...ATCAAGACTCACCAAACCATCTCTAGGGCAGGGCCTGGGACTCCACAGTTCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS-3UTR CCA 90 bp | CCAAGAATTCATGAGAACTCAGCTGTTCAGCTTCACAATCCCTGGCCGACCACGTGCGGACCATCGGGATaGACACACTGGGCTTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PRIHENSAVQLHNPWPTTCGPSG*THWAWR Trigger: TCTCCAAGCCCAGTGTGTCCATCCCGATGGTCCGCA...CGTGGTCGGCCAGGGATTGTGAAGCTGAACAGCTGAGTTCTCATGAATTCTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS-3UTR CCA 90 bp | TCAGACCCAAGGGTAGGAATGGCAGGGTCACTTGTCAGAACTGTGGAGTCCCAGCAAGAGTATCAGGACTaGGGCCATCATGCGGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: SDPRVGMAGSLVRTVESQQEYQD*GHHADH Trigger: ATGGTCCGCATGATGGCCCCAGTCCTGATACTCTTG...CTGGGACTCCACAGTTCTGACAAGTGACCCTGCCATTCCTACCCTTGGGTCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS-3UTR CCA 90 bp | TCAGACCCAAGGGTAGGAATGGCAGGGTCACTTGTCAGAACTGTGGAGTCCCAGCTCCACCGGAGCATGTaGCTGCCAAAGGCAATTAGT | + |
|
Preference number: 4 (lower is better) Translates to: SDPRVGMAGSLVRTVESQLHRSM*LPKAIS Trigger: ACTAATTGCCTTTGGCAGCCACATGCTCCGGTGGAG...CTGGGACTCCACAGTTCTGACAAGTGACCCTGCCATTCCTACCCTTGGGTCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS-3UTR TCA 90 bp | TCAGACCCAAGGGTAGGAATGGCAGGGTCACTTGTCAGAACTGTGGAGTCCCAGTCCTCCTCTGTAGACTaGCTGAGGTTCTGTGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SDPRVGMAGSLVRTVESQSSSVD*LRFCVS Trigger: TGAGACACAGAACCTCAGTCAGTCTACAGAGGAGGA...CTGGGACTCCACAGTTCTGACAAGTGACCCTGCCATTCCTACCCTTGGGTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS-3UTR GCA 90 bp | GGACTTGTTAAGTACCATCCGGGCTTCAGGGACCAAGACACTTCTCCATCTGGGACCGGAGCATGTGGCTaGCAAAGGCAATTAGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GLVKYHPGFRDQDTSPSGTGACG*QRQLVL Trigger: CAGGACTAATTGCCTTTGGCAGCCACATGCTCCGGT...CCCAGATGGAGAAGTGTCTTGGTCCCTGAAGCCCGGATGGTACTTAACAAGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS-3UTR GCA 90 bp | CCCCATGGAGGAGTAACCACTCTGGACAGGAATGATATCGAGACTTCCTCCAGTGTCCAGGGAACGAGCTaGCTCTTCCTCCTCTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: PHGGVTTLDRNDIETSSSVQGTS*LFLLCR Trigger: TCTACAGAGGAGGAAGAGGCAGCTCGTTCCCTGGAC...ACTGGAGGAAGTCTCGATATCATTCCTGTCCAGAGTGGTTACTCCTCCATGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS-3UTR GCA 90 bp | GGACTTGTTAAGTACCATCCGGGCTTCAGGGACCAAGACACTTCTCCATCTGGGGCTTTTGCCTTGGGCTaGAGGCTCCTTGTAGGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GLVKYHPGFRDQDTSPSGAFALG*RLLVGV Trigger: TACACCTACAAGGAGCCTGCAGCCCAAGGCAAAAGC...CCCAGATGGAGAAGTGTCTTGGTCCCTGAAGCCCGGATGGTACTTAACAAGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107164.3 |
||
| CDS-3UTR CCA 90 bp | CTCTTCCCAGGGATTAGAATATGCGGGAGGTTCCAGCCTCTGGCTGGACTTGTTCTCCACCGGAGCATGTaGCTGCCAAAGGCAATTAGT | + |
|
Preference number: 4 (lower is better) Translates to: LFPGIRICGRFQPLAGLVLHRSM*LPKAIS Trigger: ACTAATTGCCTTTGGCAGCCACATGCTCCGGTGGAG...AACAAGTCCAGCCAGAGGCTGGAACCTCCCGCATATTCTAATCCCTGGGAAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS-3UTR CCA 90 bp | TCAGAACTGTGGAGTCCCAGGCCCTGCCCTAGAGATGGTTTGGTGAGTCTTGATCTCCACCGGAGCATGTaGCTGCCAAAGGCAATTAGT | + |
|
Preference number: 4 (lower is better) Translates to: SELWSPRPCPRDGLVSLDLHRSM*LPKAIS Trigger: ACTAATTGCCTTTGGCAGCCACATGCTCCGGTGGAG...ATCAAGACTCACCAAACCATCTCTAGGGCAGGGCCTGGGACTCCACAGTTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS-3UTR CCA 90 bp | TCTTCCGAGGATGGGAGGTGGGACTGTTGCTGGGCATCCATGCCCAGGGAATTTTCTTCTGTGTCTCTGTaGCCAGCCAAGCTTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSEDGRWDCCWASMPREFSSVSL*PAKLSF Trigger: GAAAGAAAGCTTGGCTGGCCACAGAGACACAGAAGA...AAATTCCCTGGGCATGGATGCCCAGCAACAGTCCCACCTCCCATCCTCGGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS-3UTR CCA 90 bp | TCAGAACTGTGGAGTCCCAGGCCCTGCCCTAGAGATGGTTTGGTGAGTCTTGATAGACCTCCCAGCATATaGAGAGATTCCTGGGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SELWSPRPCPRDGLVSLDRPPSI*RDSWGN Trigger: GTTCCCCCAGGAATCTCTCCATATGCTGGGAGGTCT...ATCAAGACTCACCAAACCATCTCTAGGGCAGGGCCTGGGACTCCACAGTTCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS-3UTR CCA 90 bp | ACTCTGGACAGGAATGATATCGAGACTTCCTCCAGTGTCCTACCAAAGCAAGGGAGGAGAAGTCGGTTCTaGGAGCTGAGTCTGCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TLDRNDIETSSSVLPKQGRRSRF*ELSLPG Trigger: GCCTGGCAGACTCAGCTCCCAGAACCGACTTCTCCT...CCCTTGCTTTGGTAGGACACTGGAGGAAGTCTCGATATCATTCCTGTCCAGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107164.3 |
||
| 3UTR CAA 72 bp | TTAGAATATGCGGGAGGTTCCAGCCTCTGGCTGGACTaGTTAAGTACCATCCGGGCTTCAGGGACCAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: LEYAGGSSLWLD*LSTIRASGTKT Trigger: TGTCTTGGTCCCTGAAGCCCGGATGGTACTTAACAAGTCCAGCCAGAGGCTGGAACCTCCCGCATATTCTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS-3UTR GCA 90 bp | CCCCATGGAGGAGTAACCACTCTGGACAGGAATGATATCGAGACTTCCTCCAGTACCGGAGCATGTGGCTaGCAAAGGCAATTAGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PHGGVTTLDRNDIETSSSTGACG*QRQLVL Trigger: CAGGACTAATTGCCTTTGGCAGCCACATGCTCCGGT...ACTGGAGGAAGTCTCGATATCATTCCTGTCCAGAGTGGTTACTCCTCCATGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS-3UTR GCA 90 bp | CCAAGAATTCATGAGAACTCAGCTGTTCAGCTTCACAATCCCTGGCCGACCACGACCGGAGCATGTGGCTaGCAAAGGCAATTAGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PRIHENSAVQLHNPWPTTTGACG*QRQLVL Trigger: CAGGACTAATTGCCTTTGGCAGCCACATGCTCCGGT...CGTGGTCGGCCAGGGATTGTGAAGCTGAACAGCTGAGTTCTCATGAATTCTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS-3UTR GCA 90 bp | CTCTTCCCAGGGATTAGAATATGCGGGAGGTTCCAGCCTCTGGCTGGACTTGTTCACCAATACTTCCTGTaGTCCTTCATCTTCTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: LFPGIRICGRFQPLAGLVHQYFL*SFIFST Trigger: CGTGGAGAAGATGAAGGAGCACAGGAAGTATTGGTG...AACAAGTCCAGCCAGAGGCTGGAACCTCCCGCATATTCTAATCCCTGGGAAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS-3UTR CCA 90 bp | GGACTTGTTAAGTACCATCCGGGCTTCAGGGACCAAGACACTTCTCCATCTGGGTCCACTGATCTCCTTTaGACCCTTCAGGGCTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: GLVKYHPGFRDQDTSPSGSTDLL*TLQGFI Trigger: TATGAAGCCCTGAAGGGTCCAAAGGAGATCAGTGGA...CCCAGATGGAGAAGTGTCTTGGTCCCTGAAGCCCGGATGGTACTTAACAAGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS-3UTR CCA 90 bp | AGTAGAACCCAAGAATTCATGAGAACTCAGCTGTTCAGCTTCACAATCCCTGGCTCGGGATGGACACACTaGGCTTGGAGACACTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SRTQEFMRTQLFSFTIPGSGWTH*AWRHCW Trigger: CCAGCAGTGTCTCCAAGCCCAGTGTGTCCATCCCGA...GCCAGGGATTGTGAAGCTGAACAGCTGAGTTCTCATGAATTCTTGGGTTCTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS-3UTR CCA 90 bp | ACTCTGGACAGGAATGATATCGAGACTTCCTCCAGTGTCCTACCAAAGCAAGGGCAAGAGTATCAGGACTaGGGCCATCATGCGGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: TLDRNDIETSSSVLPKQGQEYQD*GHHADH Trigger: ATGGTCCGCATGATGGCCCCAGTCCTGATACTCTTG...CCCTTGCTTTGGTAGGACACTGGAGGAAGTCTCGATATCATTCCTGTCCAGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS-3UTR CCA 90 bp | TGGACAGGAATGATATCGAGACTTCCTCCAGTGTCCTACCAAAGCAAGGGACACATATGGAGAGATTCCTaGGGGAACCTGGGAGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: WTGMISRLPPVSYQSKGHIWRDS*GNLGGS Trigger: GGAACCTCCCAGGTTCCCCCAGGAATCTCTCCATAT...GTGTCCCTTGCTTTGGTAGGACACTGGAGGAAGTCTCGATATCATTCCTGTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS-3UTR CCA 90 bp | GCTGAGAAAGTTTATTGTACAAAGTTCGTAGAACACGGAGGGATGCTTATGACGCAGGGCTTCATAACCTaGGAGCACCAGGCAGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: AEKVYCTKFVEHGGMLMTQGFIT*EHQAAP Trigger: TGGGGCTGCCTGGTGCTCCCAGGTTATGAAGCCCTG...CGTCATAAGCATCCCTCCGTGTTCTACGAACTTTGTACAATAAACTTTCTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS-3UTR CCA 90 bp | CCAAGAATTCATGAGAACTCAGCTGTTCAGCTTCACAATCCCTGGCCGACCACGTCTTCTGTGTCTCTGTaGCCAGCCAAGCTTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PRIHENSAVQLHNPWPTTSSVSL*PAKLSF Trigger: GAAAGAAAGCTTGGCTGGCCACAGAGACACAGAAGA...CGTGGTCGGCCAGGGATTGTGAAGCTGAACAGCTGAGTTCTCATGAATTCTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS-3UTR GCA 90 bp | TGGACAGGAATGATATCGAGACTTCCTCCAGTGTCCTACCAAAGCAAGGGACACCACCAATACTTCCTGTaGTCCTTCATCTTCTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: WTGMISRLPPVSYQSKGHHQYFL*SFIFST Trigger: CGTGGAGAAGATGAAGGAGCACAGGAAGTATTGGTG...GTGTCCCTTGCTTTGGTAGGACACTGGAGGAAGTCTCGATATCATTCCTGTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS-3UTR CCA 90 bp | ACTCTGGACAGGAATGATATCGAGACTTCCTCCAGTGTCCTACCAAAGCAAGGGTCCACTGATCTCCTTTaGACCCTTCAGGGCTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: TLDRNDIETSSSVLPKQGSTDLL*TLQGFI Trigger: TATGAAGCCCTGAAGGGTCCAAAGGAGATCAGTGGA...CCCTTGCTTTGGTAGGACACTGGAGGAAGTCTCGATATCATTCCTGTCCAGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS-3UTR TCA 90 bp | AGTAGAACCCAAGAATTCATGAGAACTCAGCTGTTCAGCTTCACAATCCCTGGCTCCTCCTCTGTAGACTaGCTGAGGTTCTGTGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SRTQEFMRTQLFSFTIPGSSSVD*LRFCVS Trigger: TGAGACACAGAACCTCAGTCAGTCTACAGAGGAGGA...GCCAGGGATTGTGAAGCTGAACAGCTGAGTTCTCATGAATTCTTGGGTTCTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS-3UTR CCA 90 bp | TGGACAGGAATGATATCGAGACTTCCTCCAGTGTCCTACCAAAGCAAGGGACACGAGACCAGGAGAAGCTaGAAAGACAATGAGTGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: WTGMISRLPPVSYQSKGHETRRS*KDNECN Trigger: GTTACACTCATTGTCTTTCCAGCTTCTCCTGGTCTC...GTGTCCCTTGCTTTGGTAGGACACTGGAGGAAGTCTCGATATCATTCCTGTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107163.9 |
||
| CDS-3UTR CCA 90 bp | GAAAGTTTATTGTACAAAGTTCGTAGAACACGGAGGGATGCTTATGACGAGACAAGACCTCCCAGCATATaGAGAGATTCCTGGGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ESLLYKVRRTRRDAYDETRPPSI*RDSWGN Trigger: GTTCCCCCAGGAATCTCTCCATATGCTGGGAGGTCT...TGTCTCGTCATAAGCATCCCTCCGTGTTCTACGAACTTTGTACAATAAACTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS-3UTR CCA 90 bp | CCCTACATTTCTGTTTTATATTCTGAACACCTCCCTTCCCAACATCTTACTTTTTGGACACACTGGGCTTaGAGACACTGCTGGCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: PYISVLYSEHLPSQHLTFWTHWA*RHCWLQ Trigger: CTGTAGCCAGCAGTGTCTCCAAGCCCAGTGTGTCCA...AAAAGTAAGATGTTGGGAAGGGAGGTGTTCAGAATATAAAACAGAAATGTAGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS CCA 90 bp | CGTGGTAAGGGGCAGCCAGACGACTGGACGGGAGCTCCTCGGTTCTaGGAGCTGAGTCTGCCAGGCTTTTGCCTTGGGCTGCAGGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RGKGQPDDWTGAPRF*ELSLPGFCLGLQAP Trigger: AGGAGCCTGCAGCCCAAGGCAAAAGCCTGGCAGACTCAGCTCCCAGAACCGAGGAGCTCCCGTCCAGTCGTCTGGCTGCCCCTTACCACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123895.8 |
||
| CDS TCA 90 bp | AGGGGCAGCCAGACGACTGGACGGGAGCTCCTCGGTTCTGGGAGCTaGGTCTGCCAGGCTTTTGCCTTGGGCTGCAGGCTCCTTGTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: RGSQTTGRELLGSGS*VCQAFALGCRLLVG Trigger: ACCTACAAGGAGCCTGCAGCCCAAGGCAAAAGCCTGGCAGACTCAGCTCCCAGAACCGAGGAGCTCCCGTCCAGTCGTCTGGCTGCCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123895.8 |
||
| CDS GCA 90 bp | CTGTGGCGTGGTAAGGGGCAGCCAGACGACTGGACGGGAGCTCCCTaGATGAGGAGAGGTCGCTGTGTGAGGAGACCTCCCAGCATATGG | + |
|
Preference number: 5 (lower is better) Translates to: LWRGKGQPDDWTGAP*MRRGRCVRRPPSIW Trigger: CCATATGCTGGGAGGTCTCCTCACACAGCGACCTCTCCTCATGCAGGGAGCTCCCGTCCAGTCGTCTGGCTGCCCCTTACCACGCCACAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS CCA 90 bp | TACAGCCCTGGAGTCCTGTGGCGTGGTAAGGGGCAGCCAGACGACTaGACGGGAGCTCCCTGCATGAGGAGAGGTCGCTGTGTGAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: YSPGVLWRGKGQPDD*TGAPCMRRGRCVRR Trigger: TCTCCTCACACAGCGACCTCTCCTCATGCAGGGAGCTCCCGTCCAGTCGTCTGGCTGCCCCTTACCACGCCACAGGACTCCAGGGCTGTA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS-3UTR CAA 90 bp | TGGCTGCCTTGGGCTGGCTGTCACCATAGTGTGCCTGACCAGAGAGGCATCAGGGAGTCTGCCAGGCTTTaGCCTTGGGCTGCAGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: WLPWAGCHHSVPDQRGIRESARL*PWAAGS Trigger: GGAGCCTGCAGCCCAAGGCAAAAGCCTGGCAGACTC...CCTGATGCCTCTCTGGTCAGGCACACTATGGTGACAGCCAGCCCAAGGCAGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107164.3 |
||
| CDS CCA 90 bp | CCCTGCATGAGGAGAGGTCGCTGTGTGAGGAGACCTCCCAGCATATaGAGAGATTCCTGGGGGAACCTGGGAGGTTCCTGCAGATCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PCMRRGRCVRRPPSI*RDSWGNLGGSCRSG Trigger: GCCCGATCTGCAGGAACCTCCCAGGTTCCCCCAGGAATCTCTCCATATGCTGGGAGGTCTCCTCACACAGCGACCTCTCCTCATGCAGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS CCA 90 bp | TTTGGCCGTGACGACTGTCGGGTGGAGACCAGGAGAAGTCGGTTCTaGGAGCTGAGTCTGCCAGGCTTTTGCCTTGGGCTGCAGGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: FGRDDCRVETRRSRF*ELSLPGFCLGLQAP Trigger: AGGAGCCTGCAGCCCAAGGCAAAAGCCTGGCAGACTCAGCTCCCAGAACCGACTTCTCCTGGTCTCCACCCGACAGTCGTCACGGCCAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107164.3 |
||
| CDS-3UTR CAA 90 bp | ACAGCTGATCCCTGGCTGCCTTGGGCTGGCTGTCACCATAGTGTGCCTGACCAGGCCATCACGTCCTCCTaGTCGTCGTCCAGGGAACGA | + |
|
Preference number: 5 (lower is better) Translates to: TADPWLPWAGCHHSVPDQAITSS*SSSRER Trigger: TCGTTCCCTGGACGACGACAAGGAGGACGTGATGGC...CTGGTCAGGCACACTATGGTGACAGCCAGCCCAAGGCAGCCAGGGATCAGCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS TCA 90 bp | GTGACGACTGTCGGGTGGAGACCAGGAGAAGTCGGTTCTGGGAGCTaGGTCTGCCAGGCTTTTGCCTTGGGCTGCAGGCTCCTTGTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: VTTVGWRPGEVGSGS*VCQAFALGCRLLVG Trigger: ACCTACAAGGAGCCTGCAGCCCAAGGCAAAAGCCTGGCAGACTCAGCTCCCAGAACCGACTTCTCCTGGTCTCCACCCGACAGTCGTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107164.3 |
||
| CDS GCA 90 bp | CTGCAGCCAACAGCAGGGACAAGAGTATCAGGACTGGGGCCATCATaGGGACCATCGGGATGGACACACTGGGCTTGGAGACACTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LQPTAGTRVSGLGPS*GPSGWTHWAWRHCW Trigger: CCAGCAGTGTCTCCAAGCCCAGTGTGTCCATCCCGATGGTCCGCATGATGGCCCCAGTCCTGATACTCTTGTCCCTGCTGTTGGCTGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 ENSMUST00000123895.8 |
||
| CDS CCA 90 bp | GGGACAAGAGTATCAGGACTGGGGCCATCATGCGGACCATCGGGATaGACACACTGGGCTTGGAGACACTGCTGGCTACAGCCCTGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: GTRVSGLGPSCGPSG*THWAWRHCWLQPWS Trigger: ACTCCAGGGCTGTAGCCAGCAGTGTCTCCAAGCCCAGTGTGTCCATCCCGATGGTCCGCATGATGGCCCCAGTCCTGATACTCTTGTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 ENSMUST00000123895.8 |
||
| CDS-3UTR CAA 90 bp | GATCCCTGGCTGCCTTGGGCTGGCTGTCACCATAGTGTGCCTGACCAGAGAGGCATGGACACACTGGGCTaGGAGACACTGCTGGCTACA | + |
|
Preference number: 5 (lower is better) Translates to: DPWLPWAGCHHSVPDQRGMDTLG*ETLLAT Trigger: TGTAGCCAGCAGTGTCTCCAAGCCCAGTGTGTCCAT...GCCTCTCTGGTCAGGCACACTATGGTGACAGCCAGCCCAAGGCAGCCAGGGATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS GCA 90 bp | AGGGGGTGCCATCACGTCCTCCTTGTCGTCGTCCAGGGAACGAGCTaGCTCTTCCTCCTCTGTAGACTGACTGAGGTTCTGTGTCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RGCHHVLLVVVQGTS*LFLLCRLTEVLCLR Trigger: CCTGAGACACAGAACCTCAGTCAGTCTACAGAGGAGGAAGAGGCAGCTCGTTCCCTGGACGACGACAAGGAGGACGTGATGGCACCCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS GCA 90 bp | TACACAGAGATGAACTCAGAGAAGGCCAGTTCCTCCGCAGACATCTaGAAGGGAGGGGGTGCCATCACGTCCTCCTTGTCGTCGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: YTEMNSEKASSSADI*KGGGAITSSLSSSR Trigger: CCTGGACGACGACAAGGAGGACGTGATGGCACCCCCTCCCTTGCAGATGTCTGCGGAGGAACTGGCCTTCTCTGAGTTCATCTCTGTGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS CCA 90 bp | ACACCGCAGGGACACGGTGTCACCTTCAAATCCACTGATCTCCTTTaGACCCTTCAGGGCTTCATAACCTGGGAGCACCAGGCAGCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: TPQGHGVTFKSTDLL*TLQGFITWEHQAAP Trigger: TGGGGCTGCCTGGTGCTCCCAGGTTATGAAGCCCTGAAGGGTCCAAAGGAGATCAGTGGATTTGAAGGTGACACCGTGTCCCTGCGGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 ENSMUST00000123895.8 |
||
| CDS-3UTR CAA 90 bp | TCTTCCGAGGATGGGAGGTGGGACTGTTGCTGGGCATCCATGCCCAGGGAATTTTGCCAGGCTTTTGCCTaGGGCTGCAGGCTCCTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: SSEDGRWDCCWASMPREFCQAFA*GCRLLV Trigger: TACAAGGAGCCTGCAGCCCAAGGCAAAAGCCTGGCA...AAATTCCCTGGGCATGGATGCCCAGCAACAGTCCCACCTCCCATCCTCGGAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107164.3 |
||
| CDS TCA 90 bp | TTGTCGTCGTCCAGGGAACGAGCTGCCTCTTCCTCCTCTGTAGACTaGCTGAGGTTCTGTGTCTCAGGAGAGGGCACAGCAGAAGGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LSSSRERAASSSSVD*LRFCVSGEGTAEGL Trigger: CAACCCTTCTGCTGTGCCCTCTCCTGAGACACAGAACCTCAGTCAGTCTACAGAGGAGGAAGAGGCAGCTCGTTCCCTGGACGACGACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS CCA 90 bp | TACAGCCCTGGAGTCCTGTGGCGTGGTAAGGGGCAGCCAGACGACTaGACGGGAGCTCCCTGGAAAGACAATGAGTGTAACCTCAAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: YSPGVLWRGKGQPDD*TGAPWKDNECNLKR Trigger: TCTTTTGAGGTTACACTCATTGTCTTTCCAGGGAGCTCCCGTCCAGTCGTCTGGCTGCCCCTTACCACGCCACAGGACTCCAGGGCTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017453.12 |
||
| CDS CCA 90 bp | GCCCTGTTTGGCCGTGACGACTGTCGGGTGGAGACCAGGAGAAGCTaGAAAGACAATGAGTGTAACCTCAAAAGACTCATCGCGGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ALFGRDDCRVETRRS*KDNECNLKRLIAAQ Trigger: CTGGGCCGCGATGAGTCTTTTGAGGTTACACTCATTGTCTTTCCAGCTTCTCCTGGTCTCCACCCGACAGTCGTCACGGCCAAACAGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107163.9 |
||
| CDS-3UTR CAA 90 bp | GCTGTCACCATAGTGTGCCTGACCAGAGAGGCATCAGGAAGTGCCTACTGGGACATGGACACACTGGGCTaGGAGACACTGCTGGCTACA | + |
|
Preference number: 5 (lower is better) Translates to: AVTIVCLTREASGSAYWDMDTLG*ETLLAT Trigger: TGTAGCCAGCAGTGTCTCCAAGCCCAGTGTGTCCAT...GTCCCAGTAGGCACTTCCTGATGCCTCTCTGGTCAGGCACACTATGGTGACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS TCA 90 bp | CCACGTAGGTACACCGCAGGGACACGGTGTCACCTTCAAATCCACTaGTCTCCTTTGGACCCTTCAGGGCTTCATAACCTGGGAGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: PRRYTAGTRCHLQIH*SPLDPSGLHNLGAP Trigger: TGGTGCTCCCAGGTTATGAAGCCCTGAAGGGTCCAAAGGAGATCAGTGGATTTGAAGGTGACACCGTGTCCCTGCGGTGTACCTACGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 ENSMUST00000123895.8 |
||
| CDS GCA 90 bp | GGTCCTGATTTGCGTAGACAATGTCACCGCAGCGTGACACCAGGATaGCACCCTGCCGGCACCAATACTTCCTGTGCTCCTTCATCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GPDLRRQCHRSVTPG*HPAGTNTSCAPSSS Trigger: AGAAGATGAAGGAGCACAGGAAGTATTGGTGCCGGCAGGGTGGCATCCTGGTGTCACGCTGCGGTGACATTGTCTACGCAAATCAGGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 ENSMUST00000123895.8 |
||
| CDS GCA 90 bp | GGGCACAGCAGAAGGGTTGAGGTTTCTGAGACATTCAGGAGTCACTaGAAGGTCTATCGTCGAGTCTTCAGTGGTCCAGCCGTTCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GHSRRVEVSETFRSH*KVYRRVFSGPAVPW Trigger: CCAGGGAACGGCTGGACCACTGAAGACTCGACGATAGACCTTGCAGTGACTCCTGAATGTCTCAGAAACCTCAACCCTTCTGCTGTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS TCA 90 bp | AGACTCATCGCGGCCCAGTCTGTCAATCCCACACCAGTACTTCCCTaGATCCTTCAGGGTAAGGTCCCTCATGATCACGGTCATCGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: RLIAAQSVNPTPVLP*ILQGKVPHDHGHRE Trigger: CTCTCGATGACCGTGATCATGAGGGACCTTACCCTGAAGGATTCAGGGAAGTACTGGTGTGGGATTGACAGACTGGGCCGCGATGAGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 ENSMUST00000123895.8 |
||
| CDS GCA 90 bp | TCTCTGTGGCCAGCCAAGCTTTCTTTCTCCACCGGAGCATGTGGCTaGCAAAGGCAATTAGTCCTGCAGCCAACAGCAGGGACAAGAGTA | + |
|
Preference number: 5 (lower is better) Translates to: SLWPAKLSFSTGACG*QRQLVLQPTAGTRV Trigger: TACTCTTGTCCCTGCTGTTGGCTGCAGGACTAATTGCCTTTGGCAGCCACATGCTCCGGTGGAGAAAGAAAGCTTGGCTGGCCACAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 ENSMUST00000123895.8 |
||
| CDS-3UTR CAA 90 bp | ACTCTGGACAGGAATGATATCGAGACTTCCTCCAGTGTCCTACCAAAGCAAGGGGCCATCACGTCCTCCTaGTCGTCGTCCAGGGAACGA | + |
|
Preference number: 5 (lower is better) Translates to: TLDRNDIETSSSVLPKQGAITSS*SSSRER Trigger: TCGTTCCCTGGACGACGACAAGGAGGACGTGATGGC...CCCTTGCTTTGGTAGGACACTGGAGGAAGTCTCGATATCATTCCTGTCCAGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS CCA 90 bp | GCTTTGACCCCTGTCTTGCCCTGTTTGGCCGTGACGACTGTCGGGTaGAGACCAGGAGAAGCTGGAAAGACAATGAGTGTAACCTCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: ALTPVLPCLAVTTVG*RPGEAGKTMSVTSK Trigger: TTTTGAGGTTACACTCATTGTCTTTCCAGCTTCTCCTGGTCTCCACCCGACAGTCGTCACGGCCAAACAGGGCAAGACAGGGGTCAAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107163.9 |
||
| CDS-3UTR CAA 90 bp | CCCCATGGAGGAGTAACCACTCTGGACAGGAATGATATCGAGACTTCCTCCAGTGTGAATACAGGGGCTTaGACCCCTGTCTTGCCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PHGGVTTLDRNDIETSSSVNTGA*TPVLPC Trigger: ACAGGGCAAGACAGGGGTCAAAGCCCCTGTATTCAC...ACTGGAGGAAGTCTCGATATCATTCCTGTCCAGAGTGGTTACTCCTCCATGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS CCA 90 bp | AGAAGGACAGCAGGTGCCAGCAGGGACAGCATTGTCCCTTTTTCCTaGAAAGACAATGAGTGTAACCTCAAAAGACTCATCGCGGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RRTAGASRDSIVPFS*KDNECNLKRLIAAQ Trigger: CTGGGCCGCGATGAGTCTTTTGAGGTTACACTCATTGTCTTTCCAGGAAAAAGGGACAATGCTGTCCCTGCTGGCACCTGCTGTCCTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107164.3 ENSMUST00000123895.8 |
||
| CDS-3UTR CAA 90 bp | AGTAGAACCCAAGAATTCATGAGAACTCAGCTGTTCAGCTTCACAATCCCTGGCATGGACACACTGGGCTaGGAGACACTGCTGGCTACA | + |
|
Preference number: 5 (lower is better) Translates to: SRTQEFMRTQLFSFTIPGMDTLG*ETLLAT Trigger: TGTAGCCAGCAGTGTCTCCAAGCCCAGTGTGTCCAT...GCCAGGGATTGTGAAGCTGAACAGCTGAGTTCTCATGAATTCTTGGGTTCTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS-3UTR CAA 90 bp | AGTAGAACCCAAGAATTCATGAGAACTCAGCTGTTCAGCTTCACAATCCCTGGCCCAGCAGGGACAGCATaGTCCCTTTTTCCTGGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SRTQEFMRTQLFSFTIPGPAGTA*SLFPGK Trigger: CTTTCCAGGAAAAAGGGACAATGCTGTCCCTGCTGG...GCCAGGGATTGTGAAGCTGAACAGCTGAGTTCTCATGAATTCTTGGGTTCTACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107164.3 |
||
| CDS-3UTR CAA 90 bp | CCCTACATTTCTGTTTTATATTCTGAACACCTCCCTTCCCAACATCTTACTTTTGTGAATACAGGGGCTTaGACCCCTGTCTTGCCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PYISVLYSEHLPSQHLTFVNTGA*TPVLPC Trigger: ACAGGGCAAGACAGGGGTCAAAGCCCCTGTATTCAC...AAAAGTAAGATGTTGGGAAGGGAGGTGTTCAGAATATAAAACAGAAATGTAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS GCA 72 bp | GGTAAGGGGCAGCCAGACGACTGGACGGGAGCTCCCTaGATGAGGAGAGGTCGCTGTGTGAGGAGACCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: GKGQPDDWTGAP*MRRGRCVRRPP Trigger: GGGAGGTCTCCTCACACAGCGACCTCTCCTCATGCAGGGAGCTCCCGTCCAGTCGTCTGGCTGCCCCTTACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS CCA 72 bp | GGAGTCCTGTGGCGTGGTAAGGGGCAGCCAGACGACTaGACGGGAGCTCCCTGCATGAGGAGAGGTCGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: GVLWRGKGQPDD*TGAPCMRRGRC Trigger: ACAGCGACCTCTCCTCATGCAGGGAGCTCCCGTCCAGTCGTCTGGCTGCCCCTTACCACGCCACAGGACTCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS TCA 72 bp | CAGACGACTGGACGGGAGCTCCTCGGTTCTGGGAGCTaGGTCTGCCAGGCTTTTGCCTTGGGCTGCAGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: QTTGRELLGSGS*VCQAFALGCRL Trigger: GAGCCTGCAGCCCAAGGCAAAAGCCTGGCAGACTCAGCTCCCAGAACCGAGGAGCTCCCGTCCAGTCGTCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123895.8 |
||
| CDS GCA 72 bp | GGCCAGTTCCTCCGCAGACATCTGCAAGGGAGGGGGTaGCATCACGTCCTCCTTGTCGTCGTCCAGGGAACG | + |
|
Preference number: 6 (lower is better) Translates to: GQFLRRHLQGRG*HHVLLVVVQGT Trigger: CGTTCCCTGGACGACGACAAGGAGGACGTGATGGCACCCCCTCCCTTGCAGATGTCTGCGGAGGAACTGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS CCA 72 bp | TCCTGGGGGAACCTGGGAGGTTCCTGCAGATCGGGCTaGGGTCGCTGTGTGAGGAGAGCTCCCAGCATATGG | + |
|
Preference number: 6 (lower is better) Translates to: SWGNLGGSCRSG*GRCVRRAPSIW Trigger: CCATATGCTGGGAGCTCTCCTCACACAGCGACCCCAGCCCGATCTGCAGGAACCTCCCAGGTTCCCCCAGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS TCA 72 bp | GTCGGGTGGAGACCAGGAGAAGTCGGTTCTGGGAGCTaGGTCTGCCAGGCTTTTGCCTTGGGCTGCAGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: VGWRPGEVGSGS*VCQAFALGCRL Trigger: GAGCCTGCAGCCCAAGGCAAAAGCCTGGCAGACTCAGCTCCCAGAACCGACTTCTCCTGGTCTCCACCCGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107164.3 |
||
| CDS CAA 72 bp | GACATCTGCAAGGGAGGGGGTGCCATCACGTCCTCCTaGTCGTCGTCCAGGGAACGAGCTGCCTCTTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: DICKGGGAITSS*SSSRERAASSS Trigger: GGAGGAAGAGGCAGCTCGTTCCCTGGACGACGACAAGGAGGACGTGATGGCACCCCCTCCCTTGCAGATGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS TCA 72 bp | TGGGAGGTTCCTGCAGATCGGGCTGGGGTCGCTGTGTaGGGAGAGCTCCCAGCATATGGAGAGATTCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: WEVPADRAGVAV*GELPAYGEIPG Trigger: CCCAGGAATCTCTCCATATGCTGGGAGCTCTCCTCACACAGCGACCCCAGCCCGATCTGCAGGAACCTCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS CCA 72 bp | GACGACTGTCGGGTGGAGACCAGGAGAAGTCGGTTCTaGGAGCTGAGTCTGCCAGGCTTTTGCCTTGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: DDCRVETRRSRF*ELSLPGFCLGL Trigger: CAGCCCAAGGCAAAAGCCTGGCAGACTCAGCTCCCAGAACCGACTTCTCCTGGTCTCCACCCGACAGTCGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107164.3 |
||
| CDS CAA 90 bp | GCCACCTCGGTGAATACAGGGGCTTTGACCCCTGTCTTGCCCTGTTaGGCCGTGACGACTGTCGGGTGGAGACCAGGAGAAGCTGGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: ATSVNTGALTPVLPC*AVTTVGWRPGEAGK Trigger: CTTTCCAGCTTCTCCTGGTCTCCACCCGACAGTCGTCACGGCCAAACAGGGCAAGACAGGGGTCAAAGCCCCTGTATTCACCGAGGTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107163.9 |
||
| CDS GCA 72 bp | GCTCCTCGGTTCTGGGAGCTGAGTCTGCCAGGCTTTTaGCTTGGGCTGCAGGCTCCTTGTAGGTGTAAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: APRFWELSLPGF*LGLQAPCRCKR Trigger: CCTCTTACACCTACAAGGAGCCTGCAGCCCAAGGCAAAAGCCTGGCAGACTCAGCTCCCAGAACCGAGGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123895.8 |
||
| CDS CCA 72 bp | GGAGTCCTGTGGCGTGGTAAGGGGCAGCCAGACGACTaGACGGGAGCTCCCTGGAAAGACAATGAGTGTAAC | + |
|
Preference number: 6 (lower is better) Translates to: GVLWRGKGQPDD*TGAPWKDNECN Trigger: GTTACACTCATTGTCTTTCCAGGGAGCTCCCGTCCAGTCGTCTGGCTGCCCCTTACCACGCCACAGGACTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017453.12 |
||
| CDS CCA 72 bp | GTATCAGGACTGGGGCCATCATGCGGACCATCGGGATaGACACACTGGGCTTGGAGACACTGCTGGCTACAG | + |
|
Preference number: 6 (lower is better) Translates to: VSGLGPSCGPSG*THWAWRHCWLQ Trigger: CTGTAGCCAGCAGTGTCTCCAAGCCCAGTGTGTCCATCCCGATGGTCCGCATGATGGCCCCAGTCCTGATAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 ENSMUST00000123895.8 |
||
| CDS CCA 72 bp | TGTGTGAGGAGACCTCCCAGCATATGGAGAGATTCCTaGGGGAACCTGGGAGGTTCCTGCAGATCGGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: CVRRPPSIWRDS*GNLGGSCRSGW Trigger: CCAGCCCGATCTGCAGGAACCTCCCAGGTTCCCCCAGGAATCTCTCCATATGCTGGGAGGTCTCCTCACACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS CCA 72 bp | AGGAGAGGTCGCTGTGTGAGGAGACCTCCCAGCATATaGAGAGATTCCTGGGGGAACCTGGGAGGTTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: RRGRCVRRPPSI*RDSWGNLGGSC Trigger: GCAGGAACCTCCCAGGTTCCCCCAGGAATCTCTCCATATGCTGGGAGGTCTCCTCACACAGCGACCTCTCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS GCA 72 bp | TTGCGTAGACAATGTCACCGCAGCGTGACACCAGGATaGCACCCTGCCGGCACCAATACTTCCTGTGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LRRQCHRSVTPG*HPAGTNTSCAP Trigger: AGGAGCACAGGAAGTATTGGTGCCGGCAGGGTGGCATCCTGGTGTCACGCTGCGGTGACATTGTCTACGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 ENSMUST00000123895.8 |
||
| CDS GCA 72 bp | ACAGCAGGGACAAGAGTATCAGGACTGGGGCCATCATaGGGACCATCGGGATGGACACACTGGGCTTGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: TAGTRVSGLGPS*GPSGWTHWAWR Trigger: TCTCCAAGCCCAGTGTGTCCATCCCGATGGTCCGCATGATGGCCCCAGTCCTGATACTCTTGTCCCTGCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 ENSMUST00000123895.8 |
||
| CDS CCA 72 bp | TGTGTGAGGAGAGCTCCCAGCATATGGAGAGATTCCTaGGGGGACCTGGGAAGTTCCTGTAGACCAGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: CVRRAPSIWRDS*GDLGSSCRPGW Trigger: CCAGCCTGGTCTACAGGAACTTCCCAGGTCCCCCCAGGAATCTCTCCATATGCTGGGAGCTCTCCTCACACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS GCA 72 bp | CCAGCCAAGCTTTCTTTCTCCACCGGAGCATGTGGCTaGCAAAGGCAATTAGTCCTGCAGCCAACAGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: PAKLSFSTGACG*QRQLVLQPTAG Trigger: CCCTGCTGTTGGCTGCAGGACTAATTGCCTTTGGCAGCCACATGCTCCGGTGGAGAAAGAAAGCTTGGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 ENSMUST00000123895.8 |
||
| CDS GCA 72 bp | CATCACGTCCTCCTTGTCGTCGTCCAGGGAACGAGCTaGCTCTTCCTCCTCTGTAGACTGACTGAGGTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: HHVLLVVVQGTS*LFLLCRLTEVL Trigger: CAGAACCTCAGTCAGTCTACAGAGGAGGAAGAGGCAGCTCGTTCCCTGGACGACGACAAGGAGGACGTGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 |
||
| CDS GCA 72 bp | AGAAGTCGGTTCTGGGAGCTGAGTCTGCCAGGCTTTTaGCTTGGGCTGCAGGCTCCTTGTAGGTGTAAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: RSRFWELSLPGF*LGLQAPCRCKR Trigger: CCTCTTACACCTACAAGGAGCCTGCAGCCCAAGGCAAAAGCCTGGCAGACTCAGCTCCCAGAACCGACTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107164.3 |
||
| CDS TCA 72 bp | GCGGCCCAGTCTGTCAATCCCACACCAGTACTTCCCTaGATCCTTCAGGGTAAGGTCCCTCATGATCACGGT | + |
|
Preference number: 6 (lower is better) Translates to: AAQSVNPTPVLP*ILQGKVPHDHG Trigger: ACCGTGATCATGAGGGACCTTACCCTGAAGGATTCAGGGAAGTACTGGTGTGGGATTGACAGACTGGGCCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 ENSMUST00000123895.8 |
||
| CDS CCA 72 bp | GGACACGGTGTCACCTTCAAATCCACTGATCTCCTTTaGACCCTTCAGGGCTTCATAACCTGGGAGCACCAG | + |
|
Preference number: 6 (lower is better) Translates to: GHGVTFKSTDLL*TLQGFITWEHQ Trigger: CTGGTGCTCCCAGGTTATGAAGCCCTGAAGGGTCCAAAGGAGATCAGTGGATTTGAAGGTGACACCGTGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 ENSMUST00000123895.8 |
||
| CDS TCA 72 bp | TACACCGCAGGGACACGGTGTCACCTTCAAATCCACTaGTCTCCTTTGGACCCTTCAGGGCTTCATAACCTG | + |
|
Preference number: 6 (lower is better) Translates to: YTAGTRCHLQIH*SPLDPSGLHNL Trigger: CAGGTTATGAAGCCCTGAAGGGTCCAAAGGAGATCAGTGGATTTGAAGGTGACACCGTGTCCCTGCGGTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 ENSMUST00000123895.8 |
||
| CDS CAA 72 bp | GGGGAAGAAGGACAGCAGGTGCCAGCAGGGACAGCATaGTCCCTTTTTCCTGGAAAGACAATGAGTGTAACC | + |
|
Preference number: 6 (lower is better) Translates to: GEEGQQVPAGTA*SLFPGKTMSVT Trigger: GGTTACACTCATTGTCTTTCCAGGAAAAAGGGACAATGCTGTCCCTGCTGGCACCTGCTGTCCTTCTTCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107164.3 ENSMUST00000123895.8 |
||
| CDS CCA 72 bp | TTTCAAGGTAGACCTTCTCGTTCTTCTGTGTCTCTGTaGCCAGCCAAGCTTTCTTTCTCCACCGGAGCATGT | + |
|
Preference number: 6 (lower is better) Translates to: FQGRPSRSSVSL*PAKLSFSTGAC Trigger: ACATGCTCCGGTGGAGAAAGAAAGCTTGGCTGGCCACAGAGACACAGAAGAACGAGAAGGTCTACCTTGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017453.12 ENSMUST00000107163.9 ENSMUST00000107164.3 ENSMUST00000123895.8 |
||
| CDS CCA 72 bp | GCAGGTGCCAGCAGGGACAGCATTGTCCCTTTTTCCTaGAAAGACAATGAGTGTAACCTCAAAAGACTCATC | + |
|
Preference number: 6 (lower is better) Translates to: AGASRDSIVPFS*KDNECNLKRLI Trigger: GATGAGTCTTTTGAGGTTACACTCATTGTCTTTCCAGGAAAAAGGGACAATGCTGTCCCTGCTGGCACCTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107164.3 ENSMUST00000123895.8 |
||