Pregenerated sensors for CD300LF (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047798Ensembl transcript IDs: ENSMUST00000051264.14, ENSMUST00000106561.8, ENSMUST00000106562.3
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTCCGCTCACGGAACAGAACAGTCTGATACTTGGCCTTGCTGGCTaGTGGATGTGCAACATCCTGACTCCTTCTGCATCCCTCCACCTT | + |
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Preference number: 1 (lower is better) Translates to: APLTEQNSLILGLAG*WMCNILTPSASLHL Trigger: AAGGTGGAGGGATGCAGAAGGAGTCAGGATGTTGCACATCCAGCAGCCAGCAAGGCCAAGTATCAGACTGTTCTGTTCCGTGAGCGGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| 3UTR GCA 90 bp | ACCCAGTGCTCCGCTCACGGAACAGAACAGTCTGATACTTGGCCTTaGTGGCTGCTGGATGTGCAACATCCTGACTCCTTCTGCATCCCT | + |
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Preference number: 1 (lower is better) Translates to: TQCSAHGTEQSDTWP*WLLDVQHPDSFCIP Trigger: AGGGATGCAGAAGGAGTCAGGATGTTGCACATCCAGCAGCCAGCAAGGCCAAGTATCAGACTGTTCTGTTCCGTGAGCGGAGCACTGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| 3UTR CCA 90 bp | CCGCTCACGGAACAGAACAGTCTGATACTTGGCCTTGCTGGCTGCTaGATGTGCAACATCCTGACTCCTTCTGCATCCCTCCACCTTCTG | + |
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Preference number: 1 (lower is better) Translates to: PLTEQNSLILGLAGC*MCNILTPSASLHLL Trigger: CAGAAGGTGGAGGGATGCAGAAGGAGTCAGGATGTTGCACATCCAGCAGCCAGCAAGGCCAAGTATCAGACTGTTCTGTTCCGTGAGCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| 3UTR CCA 90 bp | CAGTGCTCCGCTCACGGAACAGAACAGTCTGATACTTGGCCTTGCTaGCTGCTGGATGTGCAACATCCTGACTCCTTCTGCATCCCTCCA | + |
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Preference number: 1 (lower is better) Translates to: QCSAHGTEQSDTWPC*LLDVQHPDSFCIPP Trigger: TGGAGGGATGCAGAAGGAGTCAGGATGTTGCACATCCAGCAGCCAGCAAGGCCAAGTATCAGACTGTTCTGTTCCGTGAGCGGAGCACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| 3UTR-3UTR TCA 90 bp | TGCTGGCTGCTGGATGTGCAACATCCTGACTCCTTCTGCATCCCTCCACCTTCTTTTACACAGCATCCCTaGAGCAGCCTGCCTGGTACC | + |
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Preference number: 2 (lower is better) Translates to: CWLLDVQHPDSFCIPPPSFTQHP*SSLPGT Trigger: GGTACCAGGCAGGCTGCTTCAGGGATGCTGTGTAAA...AGAAGGTGGAGGGATGCAGAAGGAGTCAGGATGTTGCACATCCAGCAGCCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| 3UTR-3UTR CCA 90 bp | GCTGGCTGCTGGATGTGCAACATCCTGACTCCTTCTGCATCCCTCCACCTTCTGGCCATGAGAGACGGATaGACAGAGTTCCAGTCACCA | + |
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Preference number: 2 (lower is better) Translates to: AGCWMCNILTPSASLHLLAMRDG*TEFQSP Trigger: TGGTGACTGGAACTCTGTCCATCCGTCTCTCATGGC...CAGAAGGTGGAGGGATGCAGAAGGAGTCAGGATGTTGCACATCCAGCAGCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| 3UTR-3UTR CCA 90 bp | TGCTGGCTGCTGGATGTGCAACATCCTGACTCCTTCTGCATCCCTCCACCTTCTGCCATGAGAGACGGATaGACAGAGTTCCAGTCACCA | + |
|
Preference number: 2 (lower is better) Translates to: CWLLDVQHPDSFCIPPPSAMRDG*TEFQSP Trigger: TGGTGACTGGAACTCTGTCCATCCGTCTCTCATGGC...AGAAGGTGGAGGGATGCAGAAGGAGTCAGGATGTTGCACATCCAGCAGCCAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| 3UTR CAA 90 bp | AGTGGGGATGTGGAAGGAGCCTTAATTCCCTGGAACTCCCTGAGGTaGAACTCCAAGCTCAAGCAAGGTAGAGCTGATGGCCATGAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: SGDVEGALIPWNSLR*NSKLKQGRADGHER Trigger: TCTCTCATGGCCATCAGCTCTACCTTGCTTGAGCTTGGAGTTCAACCTCAGGGAGTTCCAGGGAATTAAGGCTCCTTCCACATCCCCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| 3UTR-3UTR CCA 90 bp | GCTGGCTGCTGGATGTGCAACATCCTGACTCCTTCTGCATCCCTCCACCTTCTGTACATTGGCTATAAGTaGGGATGTGGAAGGAGCCTT | + |
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Preference number: 2 (lower is better) Translates to: AGCWMCNILTPSASLHLLYIGYK*GCGRSL Trigger: AAGGCTCCTTCCACATCCCCACTTATAGCCAATGTA...CAGAAGGTGGAGGGATGCAGAAGGAGTCAGGATGTTGCACATCCAGCAGCCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| 3UTR-3UTR GCA 90 bp | CTCTCTCTCTCTCTCTCTCTCTCACTCTCTCTCTCTCTCTCTTCCTCCTTAAAAATCCCTGAAGCAGCCTaGCTGGTACCTTCCAAGGTA | + |
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Preference number: 2 (lower is better) Translates to: LSLSLSLSLSLSLSSSLKIPEAA*LVPSKV Trigger: TACCTTGGAAGGTACCAGGCAGGCTGCTTCAGGGAT...TTTTAAGGAGGAAGAGAGAGAGAGAGAGAGTGAGAGAGAGAGAGAGAGAGAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| 3UTR-3UTR CCA 90 bp | CTCTCTCTCTCTCTCTCTCTCTCACTCTCTCTCTCTCTCTCTTCCTCCTTAAAAGGAGCCTTAATTCCCTaGAACTCCCTGAGGTTGAAC | + |
|
Preference number: 2 (lower is better) Translates to: LSLSLSLSLSLSLSSSLKGALIP*NSLRLN Trigger: GTTCAACCTCAGGGAGTTCCAGGGAATTAAGGCTCC...TTTTAAGGAGGAAGAGAGAGAGAGAGAGAGTGAGAGAGAGAGAGAGAGAGAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| 3UTR-3UTR CCA 90 bp | TGCTGGCTGCTGGATGTGCAACATCCTGACTCCTTCTGCATCCCTCCACCTTCTTATTTTGGGCCTACTTaGATAATACAGACTCATCTC | + |
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Preference number: 2 (lower is better) Translates to: CWLLDVQHPDSFCIPPPSYFGPT*IIQTHL Trigger: GAGATGAGTCTGTATTATCCAAGTAGGCCCAAAATA...AGAAGGTGGAGGGATGCAGAAGGAGTCAGGATGTTGCACATCCAGCAGCCAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| 3UTR-3UTR TCA 90 bp | TTAAAACAGACCCTTGTGGTTATATTTTGGGCCTACTTGGATAATACAGACTCATTTACACAGCATCCCTaGAGCAGCCTGCCTGGTACC | + |
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Preference number: 2 (lower is better) Translates to: LKQTLVVIFWAYLDNTDSFTQHP*SSLPGT Trigger: GGTACCAGGCAGGCTGCTTCAGGGATGCTGTGTAAA...TGAGTCTGTATTATCCAAGTAGGCCCAAAATATAACCACAAGGGTCTGTTTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| 3UTR-3UTR CCA 90 bp | CTCTCTCTCTCTCTCTTCCTCCTTAAAACAGACCCTTGTGGTTATATTTTGGGCTACATTGGCTATAAGTaGGGATGTGGAAGGAGCCTT | + |
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Preference number: 2 (lower is better) Translates to: LSLSLFLLKTDPCGYILGYIGYK*GCGRSL Trigger: AAGGCTCCTTCCACATCCCCACTTATAGCCAATGTA...GCCCAAAATATAACCACAAGGGTCTGTTTTAAGGAGGAAGAGAGAGAGAGAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| 3UTR-3UTR CCA 90 bp | TTAAAACAGACCCTTGTGGTTATATTTTGGGCCTACTTGGATAATACAGACTCAGCCATGAGAGACGGATaGACAGAGTTCCAGTCACCA | + |
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Preference number: 2 (lower is better) Translates to: LKQTLVVIFWAYLDNTDSAMRDG*TEFQSP Trigger: TGGTGACTGGAACTCTGTCCATCCGTCTCTCATGGC...TGAGTCTGTATTATCCAAGTAGGCCCAAAATATAACCACAAGGGTCTGTTTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| 3UTR-3UTR CCA 90 bp | CTTGTGGTTATATTTTGGGCCTACTTGGATAATACAGACTCATCTCAAAACTCTGGAGCCTTAATTCCCTaGAACTCCCTGAGGTTGAAC | + |
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Preference number: 2 (lower is better) Translates to: LVVIFWAYLDNTDSSQNSGALIP*NSLRLN Trigger: GTTCAACCTCAGGGAGTTCCAGGGAATTAAGGCTCC...AGAGTTTTGAGATGAGTCTGTATTATCCAAGTAGGCCCAAAATATAACCACAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| 3UTR-3UTR CCA 90 bp | CTCTCTCTCTCTCTCTCTCTCTCACTCTCTCTCTCTCTCTCTTCCTCCTTAAAATATTTTGGGCCTACTTaGATAATACAGACTCATCTC | + |
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Preference number: 2 (lower is better) Translates to: LSLSLSLSLSLSLSSSLKYFGPT*IIQTHL Trigger: GAGATGAGTCTGTATTATCCAAGTAGGCCCAAAATA...TTTTAAGGAGGAAGAGAGAGAGAGAGAGAGTGAGAGAGAGAGAGAGAGAGAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| 3UTR-3UTR CCA 90 bp | TTAAAACAGACCCTTGTGGTTATATTTTGGGCCTACTTGGATAATACAGACTCATACATTGGCTATAAGTaGGGATGTGGAAGGAGCCTT | + |
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Preference number: 2 (lower is better) Translates to: LKQTLVVIFWAYLDNTDSYIGYK*GCGRSL Trigger: AAGGCTCCTTCCACATCCCCACTTATAGCCAATGTA...TGAGTCTGTATTATCCAAGTAGGCCCAAAATATAACCACAAGGGTCTGTTTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| 3UTR-3UTR CAA 90 bp | GCTGGCTGCTGGATGTGCAACATCCTGACTCCTTCTGCATCCCTCCACCTTCTGACCTTCCAAGGTACATaGGCTATAAGTGGGGATGTG | + |
|
Preference number: 3 (lower is better) Translates to: AGCWMCNILTPSASLHLLTFQGT*AISGDV Trigger: CACATCCCCACTTATAGCCAATGTACCTTGGAAGGT...CAGAAGGTGGAGGGATGCAGAAGGAGTCAGGATGTTGCACATCCAGCAGCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| 3UTR GCA 72 bp | TGCTGGCTGCTGGATGTGCAACATCCTGACTCCTTCTaGATCCCTCCACCTTCTGCTTCTGTTGTTCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: CWLLDVQHPDSF*IPPPSASVVLS Trigger: AGAGAGAACAACAGAAGCAGAAGGTGGAGGGATGCAGAAGGAGTCAGGATGTTGCACATCCAGCAGCCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| 3UTR GCA 72 bp | AACAGTCTGATACTTGGCCTTGCTGGCTGCTGGATGTaGAACATCCTGACTCCTTCTGCATCCCTCCACCTT | + |
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Preference number: 3 (lower is better) Translates to: NSLILGLAGCWM*NILTPSASLHL Trigger: AAGGTGGAGGGATGCAGAAGGAGTCAGGATGTTGCACATCCAGCAGCCAGCAAGGCCAAGTATCAGACTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| 3UTR GCA 72 bp | ACGGAACAGAACAGTCTGATACTTGGCCTTGCTGGCTaGTGGATGTGCAACATCCTGACTCCTTCTGCATCC | + |
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Preference number: 3 (lower is better) Translates to: TEQNSLILGLAG*WMCNILTPSAS Trigger: GGATGCAGAAGGAGTCAGGATGTTGCACATCCAGCAGCCAGCAAGGCCAAGTATCAGACTGTTCTGTTCCGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| 3UTR CCA 72 bp | GAACAGAACAGTCTGATACTTGGCCTTGCTGGCTGCTaGATGTGCAACATCCTGACTCCTTCTGCATCCCTC | + |
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Preference number: 3 (lower is better) Translates to: EQNSLILGLAGC*MCNILTPSASL Trigger: GAGGGATGCAGAAGGAGTCAGGATGTTGCACATCCAGCAGCCAGCAAGGCCAAGTATCAGACTGTTCTGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| 3UTR-3UTR CAA 90 bp | CTCTCTCTCTCTCTCTCTCTCTCACTCTCTCTCTCTCTCTCTTCCTCCTTAAAATGGAACTCCCTGAGGTaGAACTCCAAGCTCAAGCAA | + |
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Preference number: 3 (lower is better) Translates to: LSLSLSLSLSLSLSSSLKWNSLR*NSKLKQ Trigger: TTGCTTGAGCTTGGAGTTCAACCTCAGGGAGTTCCA...TTTTAAGGAGGAAGAGAGAGAGAGAGAGAGTGAGAGAGAGAGAGAGAGAGAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| 3UTR-3UTR CAA 90 bp | CTCTCTCTCTCTCTCTCTCTCTCACTCTCTCTCTCTCTCTCTTCCTCCTTAAAAACCTTCCAAGGTACATaGGCTATAAGTGGGGATGTG | + |
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Preference number: 3 (lower is better) Translates to: LSLSLSLSLSLSLSSSLKTFQGT*AISGDV Trigger: CACATCCCCACTTATAGCCAATGTACCTTGGAAGGT...TTTTAAGGAGGAAGAGAGAGAGAGAGAGAGTGAGAGAGAGAGAGAGAGAGAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| 3UTR-3UTR CAA 90 bp | CTCTCTCTCTCTCTCTTCCTCCTTAAAACAGACCCTTGTGGTTATATTTTGGGCACCTTCCAAGGTACATaGGCTATAAGTGGGGATGTG | + |
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Preference number: 3 (lower is better) Translates to: LSLSLFLLKTDPCGYILGTFQGT*AISGDV Trigger: CACATCCCCACTTATAGCCAATGTACCTTGGAAGGT...GCCCAAAATATAACCACAAGGGTCTGTTTTAAGGAGGAAGAGAGAGAGAGAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| CDS-3UTR TCA 90 bp | GCTGGGCCGGGTAAGGAAGCAGGTACAGAGGCAGATGTAAAGATCCATGCTCCACCTCCTCTGGACCTGTaGCTGGATCCTCAGCCGTGC | + |
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Preference number: 4 (lower is better) Translates to: AGPGKEAGTEADVKIHAPPPLDL*LDPQPC Trigger: GCACGGCTGAGGATCCAGTCACAGGTCCAGAGGAGG...TGGAGCATGGATCTTTACATCTGCCTCTGTACCTGCTTCCTTACCCGGCCCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| CDS-3UTR TCA 90 bp | GCTGGCTGCTGGATGTGCAACATCCTGACTCCTTCTGCATCCCTCCACCTTCTGCAGGCAAGGGCCTCCTaGTGCTGCTGTACTCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: AGCWMCNILTPSASLHLLQARAS*CCCTLW Trigger: CCACAGAGTACAGCAGCATCAGGAGGCCCTTGCCTG...CAGAAGGTGGAGGGATGCAGAAGGAGTCAGGATGTTGCACATCCAGCAGCCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| CDS-3UTR GCA 90 bp | GCTGGCTGCTGGATGTGCAACATCCTGACTCCTTCTGCATCCCTCCACCTTCTGGGGGAGGTTCTGGGCTaGTTCAGGGACAGGTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: AGCWMCNILTPSASLHLLGEVLG*FRDRSA Trigger: TGCAGACCTGTCCCTGAAGCAGCCCAGAACCTCCCC...CAGAAGGTGGAGGGATGCAGAAGGAGTCAGGATGTTGCACATCCAGCAGCCAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| CDS-3UTR TCA 90 bp | TGCTGGCTGCTGGATGTGCAACATCCTGACTCCTTCTGCATCCCTCCACCTTCTCAGGCAAGGGCCTCCTaGTGCTGCTGTACTCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: CWLLDVQHPDSFCIPPPSQARAS*CCCTLW Trigger: CCACAGAGTACAGCAGCATCAGGAGGCCCTTGCCTG...AGAAGGTGGAGGGATGCAGAAGGAGTCAGGATGTTGCACATCCAGCAGCCAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| CDS-3UTR GCA 90 bp | TGCTGGCTGCTGGATGTGCAACATCCTGACTCCTTCTGCATCCCTCCACCTTCTGGGGAGGTTCTGGGCTaGTTCAGGGACAGGTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: CWLLDVQHPDSFCIPPPSGEVLG*FRDRSA Trigger: TGCAGACCTGTCCCTGAAGCAGCCCAGAACCTCCCC...AGAAGGTGGAGGGATGCAGAAGGAGTCAGGATGTTGCACATCCAGCAGCCAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| CDS-3UTR CCA 90 bp | TGCTGGCTGCTGGATGTGCAACATCCTGACTCCTTCTGCATCCCTCCACCTTCTAGCCAGGGGAGGTTCTaGGCTGCTTCAGGGACAGGT | + |
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Preference number: 4 (lower is better) Translates to: CWLLDVQHPDSFCIPPPSSQGRF*AASGTG Trigger: ACCTGTCCCTGAAGCAGCCCAGAACCTCCCCTGGCT...AGAAGGTGGAGGGATGCAGAAGGAGTCAGGATGTTGCACATCCAGCAGCCAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| CDS-3UTR TCA 90 bp | GCTGGGCCGGGTAAGGAAGCAGGTACAGAGGCAGATGTAAAGATCCATGCTCCACCGTGCAGCAGCCTGTaGTCCAGAAGAGAAAGGGGA | + |
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Preference number: 4 (lower is better) Translates to: AGPGKEAGTEADVKIHAPPCSSL*SRRERG Trigger: TCCCCTTTCTCTTCTGGATCACAGGCTGCTGCACGG...TGGAGCATGGATCTTTACATCTGCCTCTGTACCTGCTTCCTTACCCGGCCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| CDS-3UTR TCA 90 bp | GCTGGCTGCTGGATGTGCAACATCCTGACTCCTTCTGCATCCCTCCACCTTCTGCTGGGAGGAGCACACTaGGATCCAGAAACCCATCAC | + |
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Preference number: 4 (lower is better) Translates to: AGCWMCNILTPSASLHLLLGGAH*DPETHH Trigger: GTGATGGGTTTCTGGATCTCAGTGTGCTCCTCCCAG...CAGAAGGTGGAGGGATGCAGAAGGAGTCAGGATGTTGCACATCCAGCAGCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| CDS-3UTR CCA 90 bp | GCTGGCTGCTGGATGTGCAACATCCTGACTCCTTCTGCATCCCTCCACCTTCTGTCCACTTCCTCTTGGTaGTCCTTGCCAGAGGAGGAC | + |
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Preference number: 4 (lower is better) Translates to: AGCWMCNILTPSASLHLLSTSSW*SLPEED Trigger: GTCCTCCTCTGGCAAGGACCACCAAGAGGAAGTGGA...CAGAAGGTGGAGGGATGCAGAAGGAGTCAGGATGTTGCACATCCAGCAGCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| CDS-3UTR CCA 90 bp | GCTGGGCCGGGTAAGGAAGCAGGTACAGAGGCAGATGTAAAGATCCATGCTCCATCCACTTCCTCTTGGTaGTCCTTGCCAGAGGAGGAC | + |
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Preference number: 4 (lower is better) Translates to: AGPGKEAGTEADVKIHAPSTSSW*SLPEED Trigger: GTCCTCCTCTGGCAAGGACCACCAAGAGGAAGTGGA...TGGAGCATGGATCTTTACATCTGCCTCTGTACCTGCTTCCTTACCCGGCCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| CDS-3UTR CCA 90 bp | GCTGGCTGCTGGATGTGCAACATCCTGACTCCTTCTGCATCCCTCCACCTTCTGTGCTGCTGTACTCTGTaGTCTCCTCTTCAAGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: AGCWMCNILTPSASLHLLCCCTL*SPLQGL Trigger: CAGGCCTTGAAGAGGAGACCACAGAGTACAGCAGCA...CAGAAGGTGGAGGGATGCAGAAGGAGTCAGGATGTTGCACATCCAGCAGCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| CDS-3UTR TCA 90 bp | TGGAACTCCCTGAGGTTGAACTCCAAGCTCAAGCAAGGTAGAGCTGATGGCCATCCGTGCAGCAGCCTGTaGTCCAGAAGAGAAAGGGGA | + |
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Preference number: 4 (lower is better) Translates to: WNSLRLNSKLKQGRADGHPCSSL*SRRERG Trigger: TCCCCTTTCTCTTCTGGATCACAGGCTGCTGCACGG...ATGGCCATCAGCTCTACCTTGCTTGAGCTTGGAGTTCAACCTCAGGGAGTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| CDS-3UTR TCA 90 bp | TGGAACTCCCTGAGGTTGAACTCCAAGCTCAAGCAAGGTAGAGCTGATGGCCATAGACTGTGCCTGCTCTaGTGGTGGCCCAGCAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: WNSLRLNSKLKQGRADGHRLCLL*WWPSSF Trigger: AAAGCTGCTGGGCCACCATCAGAGCAGGCACAGTCT...ATGGCCATCAGCTCTACCTTGCTTGAGCTTGGAGTTCAACCTCAGGGAGTTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| CDS-3UTR GCA 90 bp | TGCTGGCTGCTGGATGTGCAACATCCTGACTCCTTCTGCATCCCTCCACCTTCTGAGAAGCAACAGGACTaGAGAGATGACTGGGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: CWLLDVQHPDSFCIPPPSEKQQD*RDDWEE Trigger: CTCCTCCCAGTCATCTCTGCAGTCCTGTTGCTTCTC...AGAAGGTGGAGGGATGCAGAAGGAGTCAGGATGTTGCACATCCAGCAGCCAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| CDS-3UTR GCA 90 bp | TGGAACTCCCTGAGGTTGAACTCCAAGCTCAAGCAAGGTAGAGCTGATGGCCATTCCAGAGACTGTGCCTaGTCTGATGGTGGCCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: WNSLRLNSKLKQGRADGHSRDCA*SDGGPA Trigger: TGCTGGGCCACCATCAGAGCAGGCACAGTCTCTGGA...ATGGCCATCAGCTCTACCTTGCTTGAGCTTGGAGTTCAACCTCAGGGAGTTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| CDS-3UTR GCA 90 bp | TGGAACTCCCTGAGGTTGAACTCCAAGCTCAAGCAAGGTAGAGCTGATGGCCATCCTCTTGGTGGTCCTTaGCAGAGGAGGACATGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: WNSLRLNSKLKQGRADGHPLGGP*QRRTWR Trigger: CCTCCATGTCCTCCTCTGGCAAGGACCACCAAGAGG...ATGGCCATCAGCTCTACCTTGCTTGAGCTTGGAGTTCAACCTCAGGGAGTTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
||
| CDS-3UTR CCA 90 bp | TGCTGGCTGCTGGATGTGCAACATCCTGACTCCTTCTGCATCCCTCCACCTTCTTGCCAGAGGAGGACATaGAGGAGCCCTTTTTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: CWLLDVQHPDSFCIPPPSCQRRT*RSPFSK Trigger: CTTGGAAAAAGGGCTCCTCCATGTCCTCCTCTGGCA...AGAAGGTGGAGGGATGCAGAAGGAGTCAGGATGTTGCACATCCAGCAGCCAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
||
| CDS-3UTR CCA 90 bp | GCTGGGCCGGGTAAGGAAGCAGGTACAGAGGCAGATGTAAAGATCCATGCTCCATGCTGCTGTACTCTGTaGTCTCCTCTTCAAGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: AGPGKEAGTEADVKIHAPCCCTL*SPLQGL Trigger: CAGGCCTTGAAGAGGAGACCACAGAGTACAGCAGCA...TGGAGCATGGATCTTTACATCTGCCTCTGTACCTGCTTCCTTACCCGGCCCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
||
| CDS-3UTR TCA 90 bp | TGGAACTCCCTGAGGTTGAACTCCAAGCTCAAGCAAGGTAGAGCTGATGGCCATCTGTGGTTGTCACTGTaGAGATGGTGGTGGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: WNSLRLNSKLKQGRADGHLWLSL*RWWWWR Trigger: CCTCCACCACCACCATCTTCACAGTGACAACCACAG...ATGGCCATCAGCTCTACCTTGCTTGAGCTTGGAGTTCAACCTCAGGGAGTTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 |
||
| 3UTR CAA 72 bp | GTGGAAGGAGCCTTAATTCCCTGGAACTCCCTGAGGTaGAACTCCAAGCTCAAGCAAGGTAGAGCTGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: VEGALIPWNSLR*NSKLKQGRADG Trigger: GCCATCAGCTCTACCTTGCTTGAGCTTGGAGTTCAACCTCAGGGAGTTCCAGGGAATTAAGGCTCCTTCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
||
| CDS-3UTR TCA 90 bp | CTCTCTCTCTCTCTCTTCCTCCTTAAAACAGACCCTTGTGGTTATATTTTGGGCCCTCCTCTGGACCTGTaGCTGGATCCTCAGCCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSLSLFLLKTDPCGYILGPPLDL*LDPQPC Trigger: GCACGGCTGAGGATCCAGTCACAGGTCCAGAGGAGG...GCCCAAAATATAACCACAAGGGTCTGTTTTAAGGAGGAAGAGAGAGAGAGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
||
| CDS-3UTR GCA 90 bp | GCTGGCTGCTGGATGTGCAACATCCTGACTCCTTCTGCATCCCTCCACCTTCTGTCAGCGTTGGAAACATaGTGGTCTCTTTTACTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AGCWMCNILTPSASLHLLSALET*WSLLLW Trigger: CCACAGTAAAAGAGACCAGCATGTTTCCAACGCTGA...CAGAAGGTGGAGGGATGCAGAAGGAGTCAGGATGTTGCACATCCAGCAGCCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 |
||
| CDS-3UTR CCA 90 bp | TGGAACTCCCTGAGGTTGAACTCCAAGCTCAAGCAAGGTAGAGCTGATGGCCATGACTGCAGAGATGACTaGGAGGAGCACACTGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: WNSLRLNSKLKQGRADGHDCRDD*EEHTEI Trigger: GATCTCAGTGTGCTCCTCCCAGTCATCTCTGCAGTC...ATGGCCATCAGCTCTACCTTGCTTGAGCTTGGAGTTCAACCTCAGGGAGTTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
||
| CDS-3UTR CCA 90 bp | TGGAACTCCCTGAGGTTGAACTCCAAGCTCAAGCAAGGTAGAGCTGATGGCCATTGCCAGAGGAGGACATaGAGGAGCCCTTTTTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: WNSLRLNSKLKQGRADGHCQRRT*RSPFSK Trigger: CTTGGAAAAAGGGCTCCTCCATGTCCTCCTCTGGCA...ATGGCCATCAGCTCTACCTTGCTTGAGCTTGGAGTTCAACCTCAGGGAGTTCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
||
| CDS-3UTR TCA 90 bp | CTCTCTCTCTCTCTCTCTCTCTCACTCTCTCTCTCTCTCTCTTCCTCCTTAAAACCGTGCAGCAGCCTGTaGTCCAGAAGAGAAAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSLSLSLSLSLSLSSSLKPCSSL*SRRERG Trigger: TCCCCTTTCTCTTCTGGATCACAGGCTGCTGCACGG...TTTTAAGGAGGAAGAGAGAGAGAGAGAGAGTGAGAGAGAGAGAGAGAGAGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
||
| CDS-3UTR TCA 90 bp | TGGAACTCCCTGAGGTTGAACTCCAAGCTCAAGCAAGGTAGAGCTGATGGCCATGTCTTACATGATCTCTaGGGAACTCCTTGGCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: WNSLRLNSKLKQGRADGHVLHDL*GTPWHQ Trigger: CTGGTGCCAAGGAGTTCCTCAGAGATCATGTAAGAC...ATGGCCATCAGCTCTACCTTGCTTGAGCTTGGAGTTCAACCTCAGGGAGTTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
||
| CDS-3UTR TCA 90 bp | CTCTCTCTCTCTCTCTCTCTCTCACTCTCTCTCTCTCTCTCTTCCTCCTTAAAAAGACTGTGCCTGCTCTaGTGGTGGCCCAGCAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LSLSLSLSLSLSLSSSLKRLCLL*WWPSSF Trigger: AAAGCTGCTGGGCCACCATCAGAGCAGGCACAGTCT...TTTTAAGGAGGAAGAGAGAGAGAGAGAGAGTGAGAGAGAGAGAGAGAGAGAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
||
| CDS-3UTR GCA 90 bp | CTCTCTCTCTCTCTCTCTCTCTCACTCTCTCTCTCTCTCTCTTCCTCCTTAAAACCTCTTGGTGGTCCTTaGCAGAGGAGGACATGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSLSLSLSLSLSLSSSLKPLGGP*QRRTWR Trigger: CCTCCATGTCCTCCTCTGGCAAGGACCACCAAGAGG...TTTTAAGGAGGAAGAGAGAGAGAGAGAGAGTGAGAGAGAGAGAGAGAGAGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
||
| 3UTR CAA 72 bp | CTGAAAGTACACAATCAATTCAACTCCACCCAACCCTaGACACTGGCAGACCTAATCGCCACCCAGTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LKVHNQFNSTQP*TLADLIATQCS Trigger: GGAGCACTGGGTGGCGATTAGGTCTGCCAGTGTCAAGGGTTGGGTGGAGTTGAATTGATTGTGTACTTTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
||
| CDS-3UTR TCA 90 bp | CTCTCTCTCTCTCTCTCTCTCTCACTCTCTCTCTCTCTCTCTTCCTCCTTAAAACTGGGAGGAGCACACTaGGATCCAGAAACCCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: LSLSLSLSLSLSLSSSLKLGGAH*DPETHH Trigger: GTGATGGGTTTCTGGATCTCAGTGTGCTCCTCCCAG...TTTTAAGGAGGAAGAGAGAGAGAGAGAGAGTGAGAGAGAGAGAGAGAGAGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
||
| CDS-3UTR TCA 90 bp | CTCTCTCTCTCTCTCTCTCTCTCACTCTCTCTCTCTCTCTCTTCCTCCTTAAAAGTAATCCTTCCAGCCTaGGGTATATCGGCACTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LSLSLSLSLSLSLSSSLKVILPA*GISALH Trigger: GTGCAGTGCCGATATACCTCAGGCTGGAAGGATTAC...TTTTAAGGAGGAAGAGAGAGAGAGAGAGAGTGAGAGAGAGAGAGAGAGAGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
||
| CDS-3UTR TCA 90 bp | CTCTCTCTCTCTCTCTTCCTCCTTAAAACAGACCCTTGTGGTTATATTTTGGGCCTGTGGTTGTCACTGTaGAGATGGTGGTGGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSLSLFLLKTDPCGYILGLWLSL*RWWWWR Trigger: CCTCCACCACCACCATCTTCACAGTGACAACCACAG...GCCCAAAATATAACCACAAGGGTCTGTTTTAAGGAGGAAGAGAGAGAGAGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 |
||
| CDS-3UTR GCA 90 bp | CTCTCTCTCTCTCTCTCTCTCTCACTCTCTCTCTCTCTCTCTTCCTCCTTAAAAGAGAAGCAACAGGACTaGAGAGATGACTGGGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LSLSLSLSLSLSLSSSLKEKQQD*RDDWEE Trigger: CTCCTCCCAGTCATCTCTGCAGTCCTGTTGCTTCTC...TTTTAAGGAGGAAGAGAGAGAGAGAGAGAGTGAGAGAGAGAGAGAGAGAGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
||
| CDS-3UTR CCA 90 bp | CTCTCTCTCTCTCTCTCTCTCTCACTCTCTCTCTCTCTCTCTTCCTCCTTAAAAGACTGCAGAGATGACTaGGAGGAGCACACTGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: LSLSLSLSLSLSLSSSLKDCRDD*EEHTEI Trigger: GATCTCAGTGTGCTCCTCCCAGTCATCTCTGCAGTC...TTTTAAGGAGGAAGAGAGAGAGAGAGAGAGTGAGAGAGAGAGAGAGAGAGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
||
| CDS-3UTR CCA 90 bp | CTCTCTCTCTCTCTCTCTCTCTCACTCTCTCTCTCTCTCTCTTCCTCCTTAAAATGCCAGAGGAGGACATaGAGGAGCCCTTTTTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSLSLSLSLSLSLSSSLKCQRRT*RSPFSK Trigger: CTTGGAAAAAGGGCTCCTCCATGTCCTCCTCTGGCA...TTTTAAGGAGGAAGAGAGAGAGAGAGAGAGTGAGAGAGAGAGAGAGAGAGAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
||
| CDS-3UTR CCA 90 bp | CTCTCTCTCTCTCTCTTCCTCCTTAAAACAGACCCTTGTGGTTATATTTTGGGCTCCACTTCCTCTTGGTaGTCCTTGCCAGAGGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LSLSLFLLKTDPCGYILGSTSSW*SLPEED Trigger: GTCCTCCTCTGGCAAGGACCACCAAGAGGAAGTGGA...GCCCAAAATATAACCACAAGGGTCTGTTTTAAGGAGGAAGAGAGAGAGAGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
||
| CDS-3UTR TCA 90 bp | CTCTCTCTCTCTCTCTTCCTCCTTAAAACAGACCCTTGTGGTTATATTTTGGGCGTAATCCTTCCAGCCTaGGGTATATCGGCACTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LSLSLFLLKTDPCGYILGVILPA*GISALH Trigger: GTGCAGTGCCGATATACCTCAGGCTGGAAGGATTAC...GCCCAAAATATAACCACAAGGGTCTGTTTTAAGGAGGAAGAGAGAGAGAGAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
||
| CDS-3UTR GCA 90 bp | CTCTCTCTCTCTCTCTCTCTCTCACTCTCTCTCTCTCTCTCTTCCTCCTTAAAACTTCAGGGACAGGTCTaGATAACAGAGATCACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSLSLSLSLSLSLSSSLKLQGQV*ITEITL Trigger: GAGGGTGATCTCTGTTATGCAGACCTGTCCCTGAAG...TTTTAAGGAGGAAGAGAGAGAGAGAGAGAGTGAGAGAGAGAGAGAGAGAGAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
||
| CDS-3UTR TCA 90 bp | CTCTCTCTCTCTCTCTTCCTCCTTAAAACAGACCCTTGTGGTTATATTTTGGGCGTCTTACATGATCTCTaGGGAACTCCTTGGCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSLSLFLLKTDPCGYILGVLHDL*GTPWHQ Trigger: CTGGTGCCAAGGAGTTCCTCAGAGATCATGTAAGAC...GCCCAAAATATAACCACAAGGGTCTGTTTTAAGGAGGAAGAGAGAGAGAGAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
||
| CDS-3UTR TCA 90 bp | TTAAAACAGACCCTTGTGGTTATATTTTGGGCCTACTTGGATAATACAGACTCACAGGCAAGGGCCTCCTaGTGCTGCTGTACTCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LKQTLVVIFWAYLDNTDSQARAS*CCCTLW Trigger: CCACAGAGTACAGCAGCATCAGGAGGCCCTTGCCTG...TGAGTCTGTATTATCCAAGTAGGCCCAAAATATAACCACAAGGGTCTGTTTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
||
| CDS-3UTR GCA 90 bp | CTCTCTCTCTCTCTCTTCCTCCTTAAAACAGACCCTTGTGGTTATATTTTGGGCCTTCAGGGACAGGTCTaGATAACAGAGATCACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSLSLFLLKTDPCGYILGLQGQV*ITEITL Trigger: GAGGGTGATCTCTGTTATGCAGACCTGTCCCTGAAG...GCCCAAAATATAACCACAAGGGTCTGTTTTAAGGAGGAAGAGAGAGAGAGAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
||
| CDS-3UTR GCA 90 bp | TTAAAACAGACCCTTGTGGTTATATTTTGGGCCTACTTGGATAATACAGACTCAGGGGAGGTTCTGGGCTaGTTCAGGGACAGGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LKQTLVVIFWAYLDNTDSGEVLG*FRDRSA Trigger: TGCAGACCTGTCCCTGAAGCAGCCCAGAACCTCCCC...TGAGTCTGTATTATCCAAGTAGGCCCAAAATATAACCACAAGGGTCTGTTTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
||
| CDS-3UTR CCA 90 bp | CTTGTGGTTATATTTTGGGCCTACTTGGATAATACAGACTCATCTCAAAACTCTAGCCAGGGGAGGTTCTaGGCTGCTTCAGGGACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LVVIFWAYLDNTDSSQNSSQGRF*AASGTG Trigger: ACCTGTCCCTGAAGCAGCCCAGAACCTCCCCTGGCT...AGAGTTTTGAGATGAGTCTGTATTATCCAAGTAGGCCCAAAATATAACCACAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
||
| CDS-3UTR GCA 90 bp | CTTGTGGTTATATTTTGGGCCTACTTGGATAATACAGACTCATCTCAAAACTCTCCTCTTGGTGGTCCTTaGCAGAGGAGGACATGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LVVIFWAYLDNTDSSQNSPLGGP*QRRTWR Trigger: CCTCCATGTCCTCCTCTGGCAAGGACCACCAAGAGG...AGAGTTTTGAGATGAGTCTGTATTATCCAAGTAGGCCCAAAATATAACCACAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
||
| CDS-3UTR GCA 90 bp | CTTGTGGTTATATTTTGGGCCTACTTGGATAATACAGACTCATCTCAAAACTCTCTGTCACCACCGCCATaGCTCTTACCTGGGCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: LVVIFWAYLDNTDSSQNSLSPPP*LLPGPM Trigger: CATTGGCCCAGGTAAGAGGCATGGCGGTGGTGACAG...AGAGTTTTGAGATGAGTCTGTATTATCCAAGTAGGCCCAAAATATAACCACAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106562.3 |
||
| CDS-3UTR CCA 90 bp | CTCTCTCTCTCTCTCTCTCTCTCACTCTCTCTCTCTCTCTCTTCCTCCTTAAAAGCGTTGGAAACATGCTaGTCTCTTTTACTGTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSLSLSLSLSLSLSSSLKALETC*SLLLWL Trigger: CAACCACAGTAAAAGAGACCAGCATGTTTCCAACGC...TTTTAAGGAGGAAGAGAGAGAGAGAGAGAGTGAGAGAGAGAGAGAGAGAGAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 |
||
| CDS-3UTR CCA 90 bp | CTCTCTCTCTCTCTCTTCCTCCTTAAAACAGACCCTTGTGGTTATATTTTGGGCGCGTTGGAAACATGCTaGTCTCTTTTACTGTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSLSLFLLKTDPCGYILGALETC*SLLLWL Trigger: CAACCACAGTAAAAGAGACCAGCATGTTTCCAACGC...GCCCAAAATATAACCACAAGGGTCTGTTTTAAGGAGGAAGAGAGAGAGAGAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 |
||
| CDS-3UTR TCA 90 bp | CTTGTGGTTATATTTTGGGCCTACTTGGATAATACAGACTCATCTCAAAACTCTGTAATCCTTCCAGCCTaGGGTATATCGGCACTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LVVIFWAYLDNTDSSQNSVILPA*GISALH Trigger: GTGCAGTGCCGATATACCTCAGGCTGGAAGGATTAC...AGAGTTTTGAGATGAGTCTGTATTATCCAAGTAGGCCCAAAATATAACCACAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
||
| CDS-3UTR CCA 90 bp | TTAAAACAGACCCTTGTGGTTATATTTTGGGCCTACTTGGATAATACAGACTCAGACTGCAGAGATGACTaGGAGGAGCACACTGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: LKQTLVVIFWAYLDNTDSDCRDD*EEHTEI Trigger: GATCTCAGTGTGCTCCTCCCAGTCATCTCTGCAGTC...TGAGTCTGTATTATCCAAGTAGGCCCAAAATATAACCACAAGGGTCTGTTTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
||
| CDS-3UTR CCA 90 bp | CTTGTGGTTATATTTTGGGCCTACTTGGATAATACAGACTCATCTCAAAACTCTTGCTGCTGTACTCTGTaGTCTCCTCTTCAAGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LVVIFWAYLDNTDSSQNSCCCTL*SPLQGL Trigger: CAGGCCTTGAAGAGGAGACCACAGAGTACAGCAGCA...AGAGTTTTGAGATGAGTCTGTATTATCCAAGTAGGCCCAAAATATAACCACAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
||
| CDS-3UTR TCA 90 bp | TTAAAACAGACCCTTGTGGTTATATTTTGGGCCTACTTGGATAATACAGACTCAGTCTTACATGATCTCTaGGGAACTCCTTGGCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: LKQTLVVIFWAYLDNTDSVLHDL*GTPWHQ Trigger: CTGGTGCCAAGGAGTTCCTCAGAGATCATGTAAGAC...TGAGTCTGTATTATCCAAGTAGGCCCAAAATATAACCACAAGGGTCTGTTTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
||
| CDS-3UTR GCA 90 bp | CTTGTGGTTATATTTTGGGCCTACTTGGATAATACAGACTCATCTCAAAACTCTCTTCAGGGACAGGTCTaGATAACAGAGATCACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LVVIFWAYLDNTDSSQNSLQGQV*ITEITL Trigger: GAGGGTGATCTCTGTTATGCAGACCTGTCCCTGAAG...AGAGTTTTGAGATGAGTCTGTATTATCCAAGTAGGCCCAAAATATAACCACAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
||
| CDS-3UTR CCA 90 bp | CTTGTGGTTATATTTTGGGCCTACTTGGATAATACAGACTCATCTCAAAACTCTTATTCCACTTCCTCTTaGTGGTCCTTGCCAGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LVVIFWAYLDNTDSSQNSYSTSS*WSLPEE Trigger: CTCCTCTGGCAAGGACCACCAAGAGGAAGTGGAATA...AGAGTTTTGAGATGAGTCTGTATTATCCAAGTAGGCCCAAAATATAACCACAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
||
| CDS-3UTR GCA 90 bp | TTAAAACAGACCCTTGTGGTTATATTTTGGGCCTACTTGGATAATACAGACTCATCAGCGTTGGAAACATaGTGGTCTCTTTTACTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LKQTLVVIFWAYLDNTDSSALET*WSLLLW Trigger: CCACAGTAAAAGAGACCAGCATGTTTCCAACGCTGA...TGAGTCTGTATTATCCAAGTAGGCCCAAAATATAACCACAAGGGTCTGTTTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 |
||
| CDS CCA 90 bp | CAAGGAGCCCTGCTCCTGACCGCTCACCTCCTCTGGACCTGTGACTaGATCCTCAGCCGTGCAGCAGCCTGTGATCCAGAAGAGAAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: QGALLLTAHLLWTCD*ILSRAAACDPEEKG Trigger: CCCTTTCTCTTCTGGATCACAGGCTGCTGCACGGCTGAGGATCCAGTCACAGGTCCAGAGGAGGTGAGCGGTCAGGAGCAGGGCTCCTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
||
| CDS CCA 90 bp | GAGCGAGGCCACCAACAGGAGAAGCAACAGGACTGCAGAGATGACTaGGAGGAGCACACTGAGATCCAGAAACCCATCACCGACGCCATC | + |
|
Preference number: 5 (lower is better) Translates to: ERGHQQEKQQDCRDD*EEHTEIQKPITDAI Trigger: GATGGCGTCGGTGATGGGTTTCTGGATCTCAGTGTGCTCCTCCCAGTCATCTCTGCAGTCCTGTTGCTTCTCCTGTTGGTGGCCTCGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| CDS-3UTR CAA 90 bp | GCTGGCTGCTGGATGTGCAACATCCTGACTCCTTCTGCATCCCTCCACCTTCTGTCCTCTTGGTGGTCCTaGCCAGAGGAGGACATGGAG | + |
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Preference number: 5 (lower is better) Translates to: AGCWMCNILTPSASLHLLSSWWS*PEEDME Trigger: CTCCATGTCCTCCTCTGGCAAGGACCACCAAGAGGA...CAGAAGGTGGAGGGATGCAGAAGGAGTCAGGATGTTGCACATCCAGCAGCCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| CDS CCA 90 bp | AGGACATGGAGGAGCCCTTTTTCCAAGAGGAGCCAGGGGAGGTTCTaGGCTGCTTCAGGGACAGGTCTGCATAACAGAGATCACCCTCCA | + |
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Preference number: 5 (lower is better) Translates to: RTWRSPFSKRSQGRF*AASGTGLHNRDHPP Trigger: TGGAGGGTGATCTCTGTTATGCAGACCTGTCCCTGAAGCAGCCCAGAACCTCCCCTGGCTCCTCTTGGAAAAAGGGCTCCTCCATGTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| CDS TCA 90 bp | CAGGTCTGCATAACAGAGATCACCCTCCAGAGACTGTGCCTGCTCTaGTGGTGGCCCAGCAGCTTTCTTCTGTCTCCTCACCATCCTCCA | + |
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Preference number: 5 (lower is better) Translates to: QVCITEITLQRLCLL*WWPSSFLLSPHHPP Trigger: TGGAGGATGGTGAGGAGACAGAAGAAAGCTGCTGGGCCACCATCAGAGCAGGCACAGTCTCTGGAGGGTGATCTCTGTTATGCAGACCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| CDS GCA 90 bp | CCTCCAAGCAAAGAGCGAGGCCACCAACAGGAGAAGCAACAGGACTaGAGAGATGACTGGGAGGAGCACACTGAGATCCAGAAACCCATC | + |
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Preference number: 5 (lower is better) Translates to: PPSKERGHQQEKQQD*RDDWEEHTEIQKPI Trigger: GATGGGTTTCTGGATCTCAGTGTGCTCCTCCCAGTCATCTCTGCAGTCCTGTTGCTTCTCCTGTTGGTGGCCTCGCTCTTTGCTTGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| CDS GCA 90 bp | CCATCACCGACGCCATCTTCACCACCGCCACTGTCACCACCGCCATaGCTCTTACCTGGGCCAATGTTCACAGTAACTTTAAACATGGGA | + |
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Preference number: 5 (lower is better) Translates to: PSPTPSSPPPLSPPP*LLPGPMFTVTLNMG Trigger: TCCCATGTTTAAAGTTACTGTGAACATTGGCCCAGGTAAGAGGCATGGCGGTGGTGACAGTGGCGGTGGTGAAGATGGCGTCGGTGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106562.3 |
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| CDS-3UTR CAA 90 bp | TGGAACTCCCTGAGGTTGAACTCCAAGCTCAAGCAAGGTAGAGCTGATGGCCATTCCTCTTGGTGGTCCTaGCCAGAGGAGGACATGGAG | + |
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Preference number: 5 (lower is better) Translates to: WNSLRLNSKLKQGRADGHSSWWS*PEEDME Trigger: CTCCATGTCCTCCTCTGGCAAGGACCACCAAGAGGA...ATGGCCATCAGCTCTACCTTGCTTGAGCTTGGAGTTCAACCTCAGGGAGTTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| CDS-3UTR CAA 90 bp | CTCTCTCTCTCTCTCTTCCTCCTTAAAACAGACCCTTGTGGTTATATTTTGGGCTCCTCTTGGTGGTCCTaGCCAGAGGAGGACATGGAG | + |
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Preference number: 5 (lower is better) Translates to: LSLSLFLLKTDPCGYILGSSWWS*PEEDME Trigger: CTCCATGTCCTCCTCTGGCAAGGACCACCAAGAGGA...GCCCAAAATATAACCACAAGGGTCTGTTTTAAGGAGGAAGAGAGAGAGAGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| CDS CCA 72 bp | TGTCAAGGAGCCCTGCTCCTGACCGCTCACCTCCTCTaGACCTGTGACTGGATCCTCAGCCGTGCAGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: CQGALLLTAHLL*TCDWILSRAAA Trigger: GGCTGCTGCACGGCTGAGGATCCAGTCACAGGTCCAGAGGAGGTGAGCGGTCAGGAGCAGGGCTCCTTGACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| CDS CCA 72 bp | CTGCTCCTGACCGCTCACCTCCTCTGGACCTGTGACTaGATCCTCAGCCGTGCAGCAGCCTGTGATCCAGAA | + |
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Preference number: 6 (lower is better) Translates to: LLLTAHLLWTCD*ILSRAAACDPE Trigger: TTCTGGATCACAGGCTGCTGCACGGCTGAGGATCCAGTCACAGGTCCAGAGGAGGTGAGCGGTCAGGAGCAG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| CDS TCA 72 bp | CTCCTGACCCAAGCCGGCCAAAGTCAGAGCGGCATATaGAACCTCCTCCCTGGGAAAGGGAGCCATGGTGAC | + |
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Preference number: 6 (lower is better) Translates to: LLTQAGQSQSGI*NLLPGKGSHGD Trigger: GTCACCATGGCTCCCTTTCCCAGGGAGGAGGTTTCATATGCCGCTCTGACTTTGGCCGGCTTGGGTCAGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| CDS CAA 72 bp | GGGAAAGGGAGCCATGGTGACATATTCCACTTCCTCTaGGTGGTCCTTGCCAGAGGAGGACATGGAGGAGCC | + |
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Preference number: 6 (lower is better) Translates to: GKGSHGDIFHFL*VVLARGGHGGA Trigger: GGCTCCTCCATGTCCTCCTCTGGCAAGGACCACCAAGAGGAAGTGGAATATGTCACCATGGCTCCCTTTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| CDS GCA 72 bp | AAAGAGCGAGGCCACCAACAGGAGAAGCAACAGGACTaGAGAGATGACTGGGAGGAGCACACTGAGATCCAG | + |
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Preference number: 6 (lower is better) Translates to: KERGHQQEKQQD*RDDWEEHTEIQ Trigger: CTGGATCTCAGTGTGCTCCTCCCAGTCATCTCTGCAGTCCTGTTGCTTCTCCTGTTGGTGGCCTCGCTCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| CDS CCA 72 bp | AGGAGCCCTTTTTCCAAGAGGAGCCAGGGGAGGTTCTaGGCTGCTTCAGGGACAGGTCTGCATAACAGAGAT | + |
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Preference number: 6 (lower is better) Translates to: RSPFSKRSQGRF*AASGTGLHNRD Trigger: ATCTCTGTTATGCAGACCTGTCCCTGAAGCAGCCCAGAACCTCCCCTGGCTCCTCTTGGAAAAAGGGCTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| CDS TCA 72 bp | ATAACAGAGATCACCCTCCAGAGACTGTGCCTGCTCTaGTGGTGGCCCAGCAGCTTTCTTCTGTCTCCTCAC | + |
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Preference number: 6 (lower is better) Translates to: ITEITLQRLCLL*WWPSSFLLSPH Trigger: GTGAGGAGACAGAAGAAAGCTGCTGGGCCACCATCAGAGCAGGCACAGTCTCTGGAGGGTGATCTCTGTTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| CDS CCA 72 bp | CACCAACAGGAGAAGCAACAGGACTGCAGAGATGACTaGGAGGAGCACACTGAGATCCAGAAACCCATCACC | + |
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Preference number: 6 (lower is better) Translates to: HQQEKQQDCRDD*EEHTEIQKPIT Trigger: GGTGATGGGTTTCTGGATCTCAGTGTGCTCCTCCCAGTCATCTCTGCAGTCCTGTTGCTTCTCCTGTTGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| CDS TCA 72 bp | CATATGAAACCTCCTCCCTGGGAAAGGGAGCCATGGTaGCATATTCCACTTCCTCTTGGTGGTCCTTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: HMKPPPWEREPW*HIPLPLGGPCQ Trigger: CTGGCAAGGACCACCAAGAGGAAGTGGAATATGTCACCATGGCTCCCTTTCCCAGGGAGGAGGTTTCATATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051264.14 ENSMUST00000106561.8 ENSMUST00000106562.3 |
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| CDS CCA 72 bp | ACCACCGCCACTGTCACCACCGCCATGCCTCTTACCTaGGCCAATGTTCACAGTAACTTTAAACATGGGATC | + |
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Preference number: 6 (lower is better) Translates to: TTATVTTAMPLT*ANVHSNFKHGI Trigger: GATCCCATGTTTAAAGTTACTGTGAACATTGGCCCAGGTAAGAGGCATGGCGGTGGTGACAGTGGCGGTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106562.3 |
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