Pregenerated sensors for CD300C2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044811Ensembl transcript IDs: ENSMUST00000092464.10, ENSMUST00000141188.2
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGAACAGGAACAACTTCAGAGACACCAGGACCCAGAAGTAGAGGCTaGTCCGAAGAGACCGAGGCTGAGGGCAGGGAGCAGGAATTGTGT | + |
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Preference number: 1 (lower is better) Translates to: GTGTTSETPGPRSRG*SEETEAEGREQELC Trigger: ACACAATTCCTGCTCCCTGCCCTCAGCCTCGGTCTCTTCGGAGCAGCCTCTACTTCTGGGTCCTGGTGTCTCTGAAGTTGTTCCTGTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141188.2 |
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| 3UTR CCA 90 bp | GAAGAGACCGAGGCTGAGGGCAGGGAGCAGGAATTGTGTCATCTGTaGTCACACTGGGATGAGTGTGCCCAACTGAGGATGTGGGGGATT | + |
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Preference number: 1 (lower is better) Translates to: EETEAEGREQELCHL*SHWDECAQLRMWGI Trigger: AATCCCCCACATCCTCAGTTGGGCACACTCATCCCAGTGTGACCACAGATGACACAATTCCTGCTCCCTGCCCTCAGCCTCGGTCTCTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141188.2 |
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| 3UTR TCA 90 bp | GGCTGTCCTCAGCCACCAGAGGAGCTGTGTTTAGGGACAGGGCCTTaGTGTCAACAGACTTCACTGGTTCTCATAACAGGGCCGAGAGCT | + |
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Preference number: 1 (lower is better) Translates to: GCPQPPEELCLGTGP*CQQTSLVLITGPRA Trigger: AGCTCTCGGCCCTGTTATGAGAACCAGTGAAGTCTGTTGACATCAAGGCCCTGTCCCTAAACACAGCTCCTCTGGTGGCTGAGGACAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141188.2 |
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| 3UTR CCA 90 bp | GAGGCTGAGGGCAGGGAGCAGGAATTGTGTCATCTGTGGTCACACTaGGATGAGTGTGCCCAACTGAGGATGTGGGGGATTCCAGGATAT | + |
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Preference number: 1 (lower is better) Translates to: EAEGREQELCHLWSH*DECAQLRMWGIPGY Trigger: ATATCCTGGAATCCCCCACATCCTCAGTTGGGCACACTCATCCCAGTGTGACCACAGATGACACAATTCCTGCTCCCTGCCCTCAGCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141188.2 |
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| 3UTR TCA 90 bp | CTCAATCTTGAAGTACTTATCGAACCCCAAGGAGCCATCAAAAAGTaGTATATCCACCGCACACATGTAGGTGTCTGCATCCTCCAGGGT | + |
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Preference number: 1 (lower is better) Translates to: LNLEVLIEPQGAIKK*YIHRTHVGVCILQG Trigger: ACCCTGGAGGATGCAGACACCTACATGTGTGCGGTGGATATATCACTTTTTGATGGCTCCTTGGGGTTCGATAAGTACTTCAAGATTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141188.2 |
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| 3UTR CCA 90 bp | AATCTTCTAAAAGTCTCAGAGCATTCTCAAGAAATATGTATTTACTaGCTGTCCTCAGCCACCAGAGGAGCTGTGTTTAGGGACAGGGCC | + |
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Preference number: 1 (lower is better) Translates to: NLLKVSEHSQEICIY*LSSATRGAVFRDRA Trigger: GGCCCTGTCCCTAAACACAGCTCCTCTGGTGGCTGAGGACAGCCAGTAAATACATATTTCTTGAGAATGCTCTGAGACTTTTAGAAGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092464.10 ENSMUST00000141188.2 |
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| 3UTR CAA 90 bp | AGAGGCTGCTCCGAAGAGACCGAGGCTGAGGGCAGGGAGCAGGAATaGTGTCATCTGTGGTCACACTGGGATGAGTGTGCCCAACTGAGG | + |
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Preference number: 2 (lower is better) Translates to: RGCSEETEAEGREQE*CHLWSHWDECAQLR Trigger: CCTCAGTTGGGCACACTCATCCCAGTGTGACCACAGATGACACAATTCCTGCTCCCTGCCCTCAGCCTCGGTCTCTTCGGAGCAGCCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141188.2 |
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| 3UTR-3UTR GCA 90 bp | ATAACAGGGCCGAGAGCTGCTTCCCCCAGAGCACCTCTGAGGCCTGTTCACCCAACACATGTAGGTGTCTaGATCCTCCAGGGTGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: ITGPRAASPRAPLRPVHPTHVGV*ILQGEA Trigger: AGCCTCACCCTGGAGGATGCAGACACCTACATGTGT...TGGGTGAACAGGCCTCAGAGGTGCTCTGGGGGAAGCAGCTCTCGGCCCTGTTAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141188.2 |
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| 3UTR CAA 90 bp | TGGCTGTCCTCAGCCACCAGAGGAGCTGTGTTTAGGGACAGGGCCTaGATGTCAACAGACTTCACTGGTTCTCATAACAGGGCCGAGAGC | + |
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Preference number: 2 (lower is better) Translates to: WLSSATRGAVFRDRA*MSTDFTGSHNRAES Trigger: GCTCTCGGCCCTGTTATGAGAACCAGTGAAGTCTGTTGACATCAAGGCCCTGTCCCTAAACACAGCTCCTCTGGTGGCTGAGGACAGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141188.2 |
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| 3UTR-3UTR TCA 90 bp | ATGTCAACAGACTTCACTGGTTCTCATAACAGGGCCGAGAGCTGCTTCCCCCAGGTGGTCACACTGGGATaGGTGTGCCCAACTGAGGAT | + |
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Preference number: 2 (lower is better) Translates to: MSTDFTGSHNRAESCFPQVVTLG*VCPTED Trigger: ATCCTCAGTTGGGCACACTCATCCCAGTGTGACCAC...CTGGGGGAAGCAGCTCTCGGCCCTGTTATGAGAACCAGTGAAGTCTGTTGACAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141188.2 |
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| 3UTR-3UTR CCA 90 bp | ATGTCAACAGACTTCACTGGTTCTCATAACAGGGCCGAGAGCTGCTTCCCCCAGGCTCGAACCTGTGACTaGGTCCTCACTTGGAACCAC | + |
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Preference number: 2 (lower is better) Translates to: MSTDFTGSHNRAESCFPQARTCD*VLTWNH Trigger: GTGGTTCCAAGTGAGGACCCAGTCACAGGTTCGAGC...CTGGGGGAAGCAGCTCTCGGCCCTGTTATGAGAACCAGTGAAGTCTGTTGACAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141188.2 |
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| 3UTR-3UTR TCA 90 bp | ATTCTCAAGAAATATGTATTTACTGGCTGTCCTCAGCCACCAGAGGAGCTGTGTCGAAGAGACCGAGGCTaGGGGCAGGGAGCAGGAATT | + |
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Preference number: 2 (lower is better) Translates to: ILKKYVFTGCPQPPEELCRRDRG*GQGAGI Trigger: AATTCCTGCTCCCTGCCCTCAGCCTCGGTCTCTTCG...ACACAGCTCCTCTGGTGGCTGAGGACAGCCAGTAAATACATATTTCTTGAGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141188.2 |
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| 3UTR-3UTR GCA 90 bp | ATTCTCAAGAAATATGTATTTACTGGCTGTCCTCAGCCACCAGAGGAGCTGTGTAACAGGGCCGAGAGCTaGTTCCCCCAGAGCACCTCT | + |
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Preference number: 2 (lower is better) Translates to: ILKKYVFTGCPQPPEELCNRAES*FPQSTS Trigger: AGAGGTGCTCTGGGGGAAGCAGCTCTCGGCCCTGTT...ACACAGCTCCTCTGGTGGCTGAGGACAGCCAGTAAATACATATTTCTTGAGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141188.2 |
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| 3UTR-3UTR CCA 90 bp | AAGAGACCGAGGCTGAGGGCAGGGAGCAGGAATTGTGTCATCTGTGGTCACACTGAAATATGTATTTACTaGCTGTCCTCAGCCACCAGA | + |
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Preference number: 2 (lower is better) Translates to: KRPRLRAGSRNCVICGHTEICIY*LSSATR Trigger: TCTGGTGGCTGAGGACAGCCAGTAAATACATATTTC...AGTGTGACCACAGATGACACAATTCCTGCTCCCTGCCCTCAGCCTCGGTCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141188.2 |
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| 3UTR CAA 90 bp | CTGATGGTCACTCGGCCATTCCTAACTTCTTCTGAGCTGCTGGTCTaGACAATATCTTTACAGAGTACCTTCAGTGACCCTCTGCACCAG | + |
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Preference number: 2 (lower is better) Translates to: LMVTRPFLTSSELLV*TISLQSTFSDPLHQ Trigger: CTGGTGCAGAGGGTCACTGAAGGTACTCTGTAAAGATATTGTCAAGACCAGCAGCTCAGAAGAAGTTAGGAATGGCCGAGTGACCATCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141188.2 |
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| 3UTR-3UTR TCA 90 bp | ATTCTCAAGAAATATGTATTTACTGGCTGTCCTCAGCCACCAGAGGAGCTGTGTCAAGGCTCGAACCTGTaGCTGGGTCCTCACTTGGAA | + |
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Preference number: 2 (lower is better) Translates to: ILKKYVFTGCPQPPEELCQGSNL*LGPHLE Trigger: TTCCAAGTGAGGACCCAGTCACAGGTTCGAGCCTTG...ACACAGCTCCTCTGGTGGCTGAGGACAGCCAGTAAATACATATTTCTTGAGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141188.2 |
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| 3UTR-3UTR CCA 90 bp | AGCATTCTCAAGAAATATGTATTTACTGGCTGTCCTCAGCCACCAGAGGAGCTGGAAGGTGAGGTTGTCTaGATGGTCCCTGATGGTCAC | + |
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Preference number: 2 (lower is better) Translates to: SILKKYVFTGCPQPPEELEGEVV*MVPDGH Trigger: GTGACCATCAGGGACCATCCAGACAACCTCACCTTC...CAGCTCCTCTGGTGGCTGAGGACAGCCAGTAAATACATATTTCTTGAGAATGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141188.2 |
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| 3UTR GCA 72 bp | ACAACTTCAGAGACACCAGGACCCAGAAGTAGAGGCTaGTCCGAAGAGACCGAGGCTGAGGGCAGGGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: TTSETPGPRSRG*SEETEAEGREQ Trigger: CTGCTCCCTGCCCTCAGCCTCGGTCTCTTCGGAGCAGCCTCTACTTCTGGGTCCTGGTGTCTCTGAAGTTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141188.2 |
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| 3UTR GCA 72 bp | ACAGACTTCACTGGTTCTCATAACAGGGCCGAGAGCTaGTTCCCCCAGAGCACCTCTGAGGCCTGTTCACCC | + |
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Preference number: 3 (lower is better) Translates to: TDFTGSHNRAES*FPQSTSEACSP Trigger: GGGTGAACAGGCCTCAGAGGTGCTCTGGGGGAAGCAGCTCTCGGCCCTGTTATGAGAACCAGTGAAGTCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141188.2 |
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| 3UTR CCA 72 bp | GAGGCTGAGGGCAGGGAGCAGGAATTGTGTCATCTGTaGTCACACTGGGATGAGTGTGCCCAACTGAGGATG | + |
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Preference number: 3 (lower is better) Translates to: EAEGREQELCHL*SHWDECAQLRM Trigger: CATCCTCAGTTGGGCACACTCATCCCAGTGTGACCACAGATGACACAATTCCTGCTCCCTGCCCTCAGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141188.2 |
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| 3UTR TCA 72 bp | GGAGCAGGAATTGTGTCATCTGTGGTCACACTGGGATaGGTGTGCCCAACTGAGGATGTGGGGGATTCCAGG | + |
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Preference number: 3 (lower is better) Translates to: GAGIVSSVVTLG*VCPTEDVGDSR Trigger: CCTGGAATCCCCCACATCCTCAGTTGGGCACACTCATCCCAGTGTGACCACAGATGACACAATTCCTGCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141188.2 |
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| 3UTR TCA 72 bp | GTCATCTGTGGTCACACTGGGATGAGTGTGCCCAACTaGGGATGTGGGGGATTCCAGGATATCTCTACCACT | + |
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Preference number: 3 (lower is better) Translates to: VICGHTGMSVPN*GCGGFQDISTT Trigger: AGTGGTAGAGATATCCTGGAATCCCCCACATCCTCAGTTGGGCACACTCATCCCAGTGTGACCACAGATGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141188.2 |
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| 3UTR TCA 72 bp | CAGCCACCAGAGGAGCTGTGTTTAGGGACAGGGCCTTaGTGTCAACAGACTTCACTGGTTCTCATAACAGGG | + |
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Preference number: 3 (lower is better) Translates to: QPPEELCLGTGP*CQQTSLVLITG Trigger: CCCTGTTATGAGAACCAGTGAAGTCTGTTGACATCAAGGCCCTGTCCCTAAACACAGCTCCTCTGGTGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141188.2 |
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| 3UTR CCA 72 bp | GATATCTCTACCACTCTCAAGGCTCGAACCTGTGACTaGGTCCTCACTTGGAACCACAGACAACTCAATCTT | + |
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Preference number: 3 (lower is better) Translates to: DISTTLKARTCD*VLTWNHRQLNL Trigger: AAGATTGAGTTGTCTGTGGTTCCAAGTGAGGACCCAGTCACAGGTTCGAGCCTTGAGAGTGGTAGAGATATC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141188.2 |
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| CDS-3UTR TCA 90 bp | CTGTCCTCAGCCACCAGAGGAGCTGTGTTTAGGGACAGGGCCTTGATGTCAACACGAAGAGACCGAGGCTaGGGGCAGGGAGCAGGAATT | + |
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Preference number: 4 (lower is better) Translates to: LSSATRGAVFRDRALMSTRRDRG*GQGAGI Trigger: AATTCCTGCTCCCTGCCCTCAGCCTCGGTCTCTTCG...TGTTGACATCAAGGCCCTGTCCCTAAACACAGCTCCTCTGGTGGCTGAGGACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092464.10 |
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| CDS-3UTR CCA 90 bp | TGGCTGTCCTCAGCCACCAGAGGAGCTGTGTTTAGGGACAGGGCCTTGATGTCAGCTGGGGCCATGCAGTaGGACACAGCCTGGAAAAGA | + |
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Preference number: 4 (lower is better) Translates to: WLSSATRGAVFRDRALMSAGAMQ*DTAWKR Trigger: TCTTTTCCAGGCTGTGTCCCACTGCATGGCCCCAGC...TGACATCAAGGCCCTGTCCCTAAACACAGCTCCTCTGGTGGCTGAGGACAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141188.2 |
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| 3UTR CAA 72 bp | TCCGAAGAGACCGAGGCTGAGGGCAGGGAGCAGGAATaGTGTCATCTGTGGTCACACTGGGATGAGTGTGCC | + |
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Preference number: 4 (lower is better) Translates to: SEETEAEGREQE*CHLWSHWDECA Trigger: GGCACACTCATCCCAGTGTGACCACAGATGACACAATTCCTGCTCCCTGCCCTCAGCCTCGGTCTCTTCGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141188.2 |
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| CDS-3UTR TCA 90 bp | TCCTCAGCCACCAGAGGAGCTGTGTTTAGGGACAGGGCCTTGATGTCAACAGACTGTCTGGATGGTCCCTaGTGGTCACTCGGCCATTCC | + |
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Preference number: 4 (lower is better) Translates to: SSATRGAVFRDRALMSTDCLDGP*WSLGHS Trigger: GGAATGGCCGAGTGACCATCAGGGACCATCCAGACA...GTCTGTTGACATCAAGGCCCTGTCCCTAAACACAGCTCCTCTGGTGGCTGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092464.10 |
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| CDS-3UTR TCA 90 bp | TCCTCAGCCACCAGAGGAGCTGTGTTTAGGGACAGGGCCTTGATGTCAACAGACACACAGCCTGGGACCTaGGAGAGGAACAGAGCTGAA | + |
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Preference number: 4 (lower is better) Translates to: SSATRGAVFRDRALMSTDTQPGT*ERNRAE Trigger: TTCAGCTCTGTTCCTCTCTCAGGTCCCAGGCTGTGT...GTCTGTTGACATCAAGGCCCTGTCCCTAAACACAGCTCCTCTGGTGGCTGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092464.10 |
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| CDS-3UTR CCA 90 bp | TTCTCAAGAAATATGTATTTACTGGCTGTCCTCAGCCACCAGAGGAGCTGTGTTGCTGGGGCCATGCAGTaGGACACAGCCTGGGACCTG | + |
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Preference number: 4 (lower is better) Translates to: FSRNMYLLAVLSHQRSCVAGAMQ*DTAWDL Trigger: CAGGTCCCAGGCTGTGTCCCACTGCATGGCCCCAGC...AACACAGCTCCTCTGGTGGCTGAGGACAGCCAGTAAATACATATTTCTTGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092464.10 |
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| 3UTR CAA 72 bp | TCAGCCACCAGAGGAGCTGTGTTTAGGGACAGGGCCTaGATGTCAACAGACTTCACTGGTTCTCATAACAGG | + |
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Preference number: 4 (lower is better) Translates to: SATRGAVFRDRA*MSTDFTGSHNR Trigger: CCTGTTATGAGAACCAGTGAAGTCTGTTGACATCAAGGCCCTGTCCCTAAACACAGCTCCTCTGGTGGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141188.2 |
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| CDS-3UTR TCA 90 bp | GAGCATTCTCAAGAAATATGTATTTACTGGCTGTCCTCAGCCACCAGAGGAGCTGTGGTCACACTGGGATaGGTGTGCCCAACTGAGGAT | + |
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Preference number: 4 (lower is better) Translates to: EHSQEICIYWLSSATRGAVVTLG*VCPTED Trigger: ATCCTCAGTTGGGCACACTCATCCCAGTGTGACCAC...AGCTCCTCTGGTGGCTGAGGACAGCCAGTAAATACATATTTCTTGAGAATGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092464.10 |
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| CDS-3UTR CCA 90 bp | ATTCTCAAGAAATATGTATTTACTGGCTGTCCTCAGCCACCAGAGGAGCTGTGTCAGTGGGACACAGCCTaGGACCTGAGAGAGGAACAG | + |
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Preference number: 4 (lower is better) Translates to: ILKKYVFTGCPQPPEELCQWDTA*DLREEQ Trigger: CTGTTCCTCTCTCAGGTCCCAGGCTGTGTCCCACTG...ACACAGCTCCTCTGGTGGCTGAGGACAGCCAGTAAATACATATTTCTTGAGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092464.10 |
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| CDS-3UTR CCA 90 bp | GAGCATTCTCAAGAAATATGTATTTACTGGCTGTCCTCAGCCACCAGAGGAGCTGCTCGAACCTGTGACTaGGTCCTCACTTGGAACCAC | + |
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Preference number: 4 (lower is better) Translates to: EHSQEICIYWLSSATRGAARTCD*VLTWNH Trigger: GTGGTTCCAAGTGAGGACCCAGTCACAGGTTCGAGC...AGCTCCTCTGGTGGCTGAGGACAGCCAGTAAATACATATTTCTTGAGAATGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092464.10 |
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| CDS-3UTR CCA 90 bp | TCCTCAGCCACCAGAGGAGCTGTGTTTAGGGACAGGGCCTTGATGTCAACAGACCAGTGGGACACAGCCTaGAAAAGAGTAACTTCAATT | + |
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Preference number: 4 (lower is better) Translates to: SSATRGAVFRDRALMSTDQWDTA*KRVTSI Trigger: AATTGAAGTTACTCTTTTCCAGGCTGTGTCCCACTG...GTCTGTTGACATCAAGGCCCTGTCCCTAAACACAGCTCCTCTGGTGGCTGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141188.2 |
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| CDS-3UTR GCA 90 bp | GAGCATTCTCAAGAAATATGTATTTACTGGCTGTCCTCAGCCACCAGAGGAGCTACACATGTAGGTGTCTaGATCCTCCAGGGTGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: EHSQEICIYWLSSATRGATHVGV*ILQGEA Trigger: AGCCTCACCCTGGAGGATGCAGACACCTACATGTGT...AGCTCCTCTGGTGGCTGAGGACAGCCAGTAAATACATATTTCTTGAGAATGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092464.10 |
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| CDS-3UTR TCA 90 bp | TTGATACACCACAGAGAATCTTCTAAAAGTCTCAGAGCATTCTCAAGAAATATGCCCCCAGAGCACCTCTaGGGCCTGTTCACCCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: LIHHRESSKSLRAFSRNMPPEHL*GLFTQR Trigger: CCTCTGGGTGAACAGGCCTCAGAGGTGCTCTGGGGG...CATATTTCTTGAGAATGCTCTGAGACTTTTAGAAGATTCTCTGTGGTGTATCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092464.10 |
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| CDS-3UTR TCA 90 bp | ACTTCTTCTGAGCTGCTGGTCTTGACAATATCTTTACAGAGTACCTTCAGTGACCTGGTCTCTGGGACCTaGGAGAGGAACAGAGCTGAA | + |
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Preference number: 4 (lower is better) Translates to: TSSELLVLTISLQSTFSDLVSGT*ERNRAE Trigger: TTCAGCTCTGTTCCTCTCTCAGGTCCCAGAGACCAG...GTCACTGAAGGTACTCTGTAAAGATATTGTCAAGACCAGCAGCTCAGAAGAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141188.2 |
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| CDS-3UTR GCA 90 bp | GAGCATTCTCAAGAAATATGTATTTACTGGCTGTCCTCAGCCACCAGAGGAGCTGGACAGCACCAAGCATaGTCAGGAACAGGAACAACT | + |
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Preference number: 4 (lower is better) Translates to: EHSQEICIYWLSSATRGAGQHQA*SGTGTT Trigger: AGTTGTTCCTGTTCCTGAGCATGCTTGGTGCTGTCC...AGCTCCTCTGGTGGCTGAGGACAGCCAGTAAATACATATTTCTTGAGAATGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092464.10 |
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| CDS-3UTR GCA 90 bp | ATGTGTTTGATACACCACAGAGAATCTTCTAAAAGTCTCAGAGCATTCTCAAGAAACAGGGCCGAGAGCTaGTTCCCCCAGAGCACCTCT | + |
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Preference number: 4 (lower is better) Translates to: MCLIHHRESSKSLRAFSRNRAES*FPQSTS Trigger: AGAGGTGCTCTGGGGGAAGCAGCTCTCGGCCCTGTT...TCTTGAGAATGCTCTGAGACTTTTAGAAGATTCTCTGTGGTGTATCAAACACAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092464.10 |
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| CDS-3UTR CCA 90 bp | AGCATTCTCAAGAAATATGTATTTACTGGCTGTCCTCAGCCACCAGAGGAGCTGGACTGGGTCCTCACTTaGAACCACAGACAACTCAAT | + |
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Preference number: 4 (lower is better) Translates to: SILKKYVFTGCPQPPEELDWVLT*NHRQLN Trigger: ATTGAGTTGTCTGTGGTTCCAAGTGAGGACCCAGTC...CAGCTCCTCTGGTGGCTGAGGACAGCCAGTAAATACATATTTCTTGAGAATGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092464.10 |
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| 3UTR CAA 72 bp | ACTCGGCCATTCCTAACTTCTTCTGAGCTGCTGGTCTaGACAATATCTTTACAGAGTACCTTCAGTGACCCT | + |
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Preference number: 4 (lower is better) Translates to: TRPFLTSSELLV*TISLQSTFSDP Trigger: AGGGTCACTGAAGGTACTCTGTAAAGATATTGTCAAGACCAGCAGCTCAGAAGAAGTTAGGAATGGCCGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141188.2 |
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| 3UTR CAA 72 bp | ACTGGGTCCTCACTTGGAACCACAGACAACTCAATCTaGAAGTACTTATCGAACCCCAAGGAGCCATCAAAA | + |
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Preference number: 4 (lower is better) Translates to: TGSSLGTTDNSI*KYLSNPKEPSK Trigger: TTTTGATGGCTCCTTGGGGTTCGATAAGTACTTCAAGATTGAGTTGTCTGTGGTTCCAAGTGAGGACCCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141188.2 |
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| CDS-3UTR TCA 90 bp | AGCATTCTCAAGAAATATGTATTTACTGGCTGTCCTCAGCCACCAGAGGAGCTGCTGAGCTGCTGGTCTTaGCAATATCTTTACAGAGTA | + |
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Preference number: 4 (lower is better) Translates to: SILKKYVFTGCPQPPEELLSCWS*QYLYRV Trigger: TACTCTGTAAAGATATTGTCAAGACCAGCAGCTCAG...CAGCTCCTCTGGTGGCTGAGGACAGCCAGTAAATACATATTTCTTGAGAATGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092464.10 |
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| CDS-3UTR GCA 90 bp | TGTTTGATACACCACAGAGAATCTTCTAAAAGTCTCAGAGCATTCTCAAGAAATATAGTGCTGGGGCCATaGAGTGGGACACAGCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: CLIHHRESSKSLRAFSRNIVLGP*SGTQPG Trigger: TCCAGGCTGTGTCCCACTGCATGGCCCCAGCACTAT...ATTTCTTGAGAATGCTCTGAGACTTTTAGAAGATTCTCTGTGGTGTATCAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141188.2 |
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| CDS-3UTR TCA 90 bp | TGTTTGATACACCACAGAGAATCTTCTAAAAGTCTCAGAGCATTCTCAAGAAATCAAGGCTCGAACCTGTaGCTGGGTCCTCACTTGGAA | + |
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Preference number: 4 (lower is better) Translates to: CLIHHRESSKSLRAFSRNQGSNL*LGPHLE Trigger: TTCCAAGTGAGGACCCAGTCACAGGTTCGAGCCTTG...ATTTCTTGAGAATGCTCTGAGACTTTTAGAAGATTCTCTGTGGTGTATCAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092464.10 |
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| CDS-3UTR CCA 90 bp | TGTTTGATACACCACAGAGAATCTTCTAAAAGTCTCAGAGCATTCTCAAGAAATGAAGGTGAGGTTGTCTaGATGGTCCCTGATGGTCAC | + |
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Preference number: 4 (lower is better) Translates to: CLIHHRESSKSLRAFSRNEGEVV*MVPDGH Trigger: GTGACCATCAGGGACCATCCAGACAACCTCACCTTC...ATTTCTTGAGAATGCTCTGAGACTTTTAGAAGATTCTCTGTGGTGTATCAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092464.10 |
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| CDS-3UTR CCA 90 bp | TTCTCAAGAAATATGTATTTACTGGCTGTCCTCAGCCACCAGAGGAGCTGTGTTAGTAAGTCCTCCCTTTaGTCAGTTCTTAAAAACCCT | + |
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Preference number: 4 (lower is better) Translates to: FSRNMYLLAVLSHQRSCVSKSSL*SVLKNP Trigger: AGGGTTTTTAAGAACTGACCAAAGGGAGGACTTACT...AACACAGCTCCTCTGGTGGCTGAGGACAGCCAGTAAATACATATTTCTTGAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141188.2 |
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| CDS-3UTR CCA 90 bp | TCATTTATGTGTTTGATACACCACAGAGAATCTTCTAAAAGTCTCAGAGCATTCTTCTTAAAAACCCTCTaGTCTCTGGGACCTGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: SFMCLIHHRESSKSLRAFFLKTL*SLGPER Trigger: TCTCTCAGGTCCCAGAGACCAGAGGGTTTTTAAGAA...GAATGCTCTGAGACTTTTAGAAGATTCTCTGTGGTGTATCAAACACATAAATGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141188.2 |
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| CDS-3UTR CAA 90 bp | TCCTCAGCCACCAGAGGAGCTGTGTTTAGGGACAGGGCCTTGATGTCAACAGACCCTCTGCACCAGAATTaGTCCTTAGTCTTGAATTTC | + |
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Preference number: 5 (lower is better) Translates to: SSATRGAVFRDRALMSTDPLHQN*SLVLNF Trigger: GAAATTCAAGACTAAGGACAAATTCTGGTGCAGAGG...GTCTGTTGACATCAAGGCCCTGTCCCTAAACACAGCTCCTCTGGTGGCTGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092464.10 |
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| CDS TCA 90 bp | GCACCAGAATTTGTCCTTAGTCTTGAATTTCTCCTCGTATTGACATaGCACACTGAGCGATTCCCCAACAGCGCCTGTGATAGTGCTGGG | + |
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Preference number: 5 (lower is better) Translates to: APEFVLSLEFLLVLT*HTERFPNSACDSAG Trigger: CCCAGCACTATCACAGGCGCTGTTGGGGAATCGCTCAGTGTGTCATGTCAATACGAGGAGAAATTCAAGACTAAGGACAAATTCTGGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092464.10 |
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| CDS-3UTR CAA 90 bp | ATGTGTTTGATACACCACAGAGAATCTTCTAAAAGTCTCAGAGCATTCTCAAGAGGCAGGGAGCAGGAATaGTGTCATCTGTGGTCACAC | + |
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Preference number: 5 (lower is better) Translates to: MCLIHHRESSKSLRAFSRGREQE*CHLWSH Trigger: GTGTGACCACAGATGACACAATTCCTGCTCCCTGCC...TCTTGAGAATGCTCTGAGACTTTTAGAAGATTCTCTGTGGTGTATCAAACACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092464.10 |
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| CDS CCA 72 bp | CCCAACAGCGCCTGTGATAGTGCTGGGGCCATGCAGTaGGACACAGCCTGGGACCTGAGAGAGGAACAGAGC | + |
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Preference number: 6 (lower is better) Translates to: PNSACDSAGAMQ*DTAWDLREEQS Trigger: GCTCTGTTCCTCTCTCAGGTCCCAGGCTGTGTCCCACTGCATGGCCCCAGCACTATCACAGGCGCTGTTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092464.10 |
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| CDS CCA 72 bp | CCCAACAGCGCCTGTGATAGTGCTGGGGCCATGCAGTaGGACACAGCCTGGAAAAGAGTAACTTCAATTCTG | + |
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Preference number: 6 (lower is better) Translates to: PNSACDSAGAMQ*DTAWKRVTSIL Trigger: CAGAATTGAAGTTACTCTTTTCCAGGCTGTGTCCCACTGCATGGCCCCAGCACTATCACAGGCGCTGTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141188.2 |
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| CDS CCA 72 bp | GTAAGTCCTCCCTTTGGTCAGTTCTTAAAAACCCTCTaGTCTCTGGGACCTGAGAGAGGAACAGAGCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: VSPPFGQFLKTL*SLGPERGTELK Trigger: CTTCAGCTCTGTTCCTCTCTCAGGTCCCAGAGACCAGAGGGTTTTTAAGAACTGACCAAAGGGAGGACTTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141188.2 |
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| CDS TCA 72 bp | CAGAATTTGTCCTTAGTCTTGAATTTCTCCTCGTATTaGCATGACACACTGAGCGATTCCCCAACAGCGCCT | + |
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Preference number: 6 (lower is better) Translates to: QNLSLVLNFSSY*HDTLSDSPTAP Trigger: AGGCGCTGTTGGGGAATCGCTCAGTGTGTCATGTCAATACGAGGAGAAATTCAAGACTAAGGACAAATTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092464.10 |
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| CDS CCA 72 bp | TGGAAAAGAGTAACTTCAATTCTGCACCCTGACAGCTaGATGGGAGTAAGTCCTCCCTTTGGTCAGTTCTTA | + |
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Preference number: 6 (lower is better) Translates to: WKRVTSILHPDS*MGVSPPFGQFL Trigger: TAAGAACTGACCAAAGGGAGGACTTACTCCCATCCAGCTGTCAGGGTGCAGAATTGAAGTTACTCTTTTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141188.2 |
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| CDS TCA 72 bp | GCTGGTCTTGACAATATCTTTACAGAGTACCTTCAGTaGCCCTCTGCACCAGAATTTGTCCTTAGTCTTGAA | + |
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Preference number: 6 (lower is better) Translates to: AGLDNIFTEYLQ*PSAPEFVLSLE Trigger: TTCAAGACTAAGGACAAATTCTGGTGCAGAGGGTCACTGAAGGTACTCTGTAAAGATATTGTCAAGACCAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092464.10 |
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