Pregenerated sensors for CD300A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034652Ensembl transcript IDs: ENSMUST00000045151.6, ENSMUST00000106582.9
Found 168 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGAGAGCCAGTGGGATGAGACTGTGCCCACAGAGCCCTGGCTCCTaGTCATCTTTAGTGAAGCCACTGAGGCTCATGACATTGAGGGCA | + |
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Preference number: 1 (lower is better) Translates to: ERASGMRLCPQSPGS*SSLVKPLRLMTLRA Trigger: TGCCCTCAATGTCATGAGCCTCAGTGGCTTCACTAAAGATGAGCAGGAGCCAGGGCTCTGTGGGCACAGTCTCATCCCACTGGCTCTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR GCA 90 bp | CTCTGTAAACCAAGCTGGTCTCAAACTCAGAGACCTGCCTGCCTCTaGCTCCCAAGTGCTAGGATCAAAGGTGTGCACCACCACCCAGCA | + |
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Preference number: 1 (lower is better) Translates to: LCKPSWSQTQRPACL*LPSARIKGVHHHPA Trigger: TGCTGGGTGGTGGTGCACACCTTTGATCCTAGCACTTGGGAGGCAGAGGCAGGCAGGTCTCTGAGTTTGAGACCAGCTTGGTTTACAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR CCA 90 bp | CTAAGAGGAGAGAGCCAGTGGGATGAGACTGTGCCCACAGAGCCCTaGCTCCTGCTCATCTTTAGTGAAGCCACTGAGGCTCATGACATT | + |
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Preference number: 1 (lower is better) Translates to: LRGESQWDETVPTEP*LLLIFSEATEAHDI Trigger: AATGTCATGAGCCTCAGTGGCTTCACTAAAGATGAGCAGGAGCCAGGGCTCTGTGGGCACAGTCTCATCCCACTGGCTCTCTCCTCTTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR CCA 90 bp | ACACCCAGAGGCAGAACAAAATACAGGCTAAGAGGAGAGAGCCAGTaGGATGAGACTGTGCCCACAGAGCCCTGGCTCCTGCTCATCTTT | + |
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Preference number: 1 (lower is better) Translates to: TPRGRTKYRLRGESQ*DETVPTEPWLLLIF Trigger: AAAGATGAGCAGGAGCCAGGGCTCTGTGGGCACAGTCTCATCCCACTGGCTCTCTCCTCTTAGCCTGTATTTTGTTCTGCCTCTGGGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR TCA 90 bp | GAAAAGAACCACTGGTGGGTTTGGGGTTATGGCCTGGGACAGAGCTaGGAGCAGATCAGGGCTCTGTTTGCTGTACCCATAGTCCCTACT | + |
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Preference number: 1 (lower is better) Translates to: EKNHWWVWGYGLGQS*EQIRALFAVPIVPT Trigger: AGTAGGGACTATGGGTACAGCAAACAGAGCCCTGATCTGCTCTCAGCTCTGTCCCAGGCCATAACCCCAAACCCACCAGTGGTTCTTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR GCA 90 bp | GTAAGAAGTGGCTGGAGAGATGGCTCAGTGGTTAAGAGTACCGACTaGTCTTCCGAAGGTCCTGAGTTCAAAGCCCAGCAACCACATGGT | + |
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Preference number: 1 (lower is better) Translates to: VRSGWRDGSVVKSTD*SSEGPEFKAQQPHG Trigger: ACCATGTGGTTGCTGGGCTTTGAACTCAGGACCTTCGGAAGAGCAGTCGGTACTCTTAACCACTGAGCCATCTCTCCAGCCACTTCTTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR GCA 90 bp | CTACTTCCCCTCTTAAGACTCTTAAGTCCCATCTGCGCGTCCCAGTaGCCACTGCTCTTTCAAGAGAAAAGAACCACTGGTGGGTTTGGG | + |
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Preference number: 1 (lower is better) Translates to: LLPLLRLLSPICASQ*PLLFQEKRTTGGFG Trigger: CCCAAACCCACCAGTGGTTCTTTTCTCTTGAAAGAGCAGTGGGCACTGGGACGCGCAGATGGGACTTAAGAGTCTTAAGAGGGGAAGTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR GCA 90 bp | GCCACAGCATCCCTACTTCCCCTCTTAAGACTCTTAAGTCCCATCTaGGCGTCCCAGTGCCCACTGCTCTTTCAAGAGAAAAGAACCACT | + |
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Preference number: 1 (lower is better) Translates to: ATASLLPLLRLLSPI*ASQCPLLFQEKRTT Trigger: AGTGGTTCTTTTCTCTTGAAAGAGCAGTGGGCACTGGGACGCGCAGATGGGACTTAAGAGTCTTAAGAGGGGAAGTAGGGATGCTGTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR CCA 90 bp | CCCTACTGTCCTGACACATTTCCCACACACCGTGGAACCTGGCTTTaGGCGTGTATCCATCCGTGTATGTGTGTTTCCCCTTTTATGTCT | + |
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Preference number: 1 (lower is better) Translates to: PYCPDTFPTHRGTWL*ACIHPCMCVSPFMS Trigger: AGACATAAAAGGGGAAACACACATACACGGATGGATACACGCCCAAAGCCAGGTTCCACGGTGTGTGGGAAATGTGTCAGGACAGTAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR CCA 90 bp | CATAGTCCCTACTGTCCTGACACATTTCCCACACACCGTGGAACCTaGCTTTGGGCGTGTATCCATCCGTGTATGTGTGTTTCCCCTTTT | + |
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Preference number: 1 (lower is better) Translates to: HSPYCPDTFPTHRGT*LWACIHPCMCVSPF Trigger: AAAAGGGGAAACACACATACACGGATGGATACACGCCCAAAGCCAGGTTCCACGGTGTGTGGGAAATGTGTCAGGACAGTAGGGACTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR TCA 90 bp | AGCCCAGCAACCACATGGTGGCTCACAACCATCCGTAATGAGATCTaGGGTCCTCTTCTGGTGTGTCTGAAGACAGCTACAGTGTACTTA | + |
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Preference number: 1 (lower is better) Translates to: SPATTWWLTTIRNEI*GPLLVCLKTATVYL Trigger: TAAGTACACTGTAGCTGTCTTCAGACACACCAGAAGAGGACCTCAGATCTCATTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR TCA 90 bp | TGTGTTCCATCAAGAACAGCAGTTGGTATGTCCTTCCCAACCCCTTaGACCCCAAAGGCTCCTCTGACTTCAAAGCTGGGCTTTAATAGG | + |
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Preference number: 1 (lower is better) Translates to: CVPSRTAVGMSFPTP*TPKAPLTSKLGFNR Trigger: CCTATTAAAGCCCAGCTTTGAAGTCAGAGGAGCCTTTGGGGTTCAAGGGGTTGGGAAGGACATACCAACTGCTGTTCTTGATGGAACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR TCA 90 bp | ACCAAACTCAGGTCACCAGCCTTGTATGGTAAGCATTTCACCCACTaGGCAGACCACACATCCAGCTTTTTATATGGGTTCTGGGGACCA | + |
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Preference number: 1 (lower is better) Translates to: TKLRSPALYGKHFTH*ADHTSSFLYGFWGP Trigger: TGGTCCCCAGAACCCATATAAAAAGCTGGATGTGTGGTCTGCTCAGTGGGTGAAATGCTTACCATACAAGGCTGGTGACCTGAGTTTGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR TCA 90 bp | GGGGTTTTGTCCTATGCTTCCCTGTTTCCAGTCTTCTGTCTGTTGTaGAGCAGGTCCCTAAATGCTCTGCAGGGAGTGTATGAAATATGG | + |
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Preference number: 1 (lower is better) Translates to: GVLSYASLFPVFCLL*SRSLNALQGVYEIW Trigger: CCATATTTCATACACTCCCTGCAGAGCATTTAGGGACCTGCTTCACAACAGACAGAAGACTGGAAACAGGGAAGCATAGGACAAAACCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR CCA 90 bp | GTCTCATGGGTCCCCCACTTTCCCAGTGACCACAGATGTTCTTCCTaGACTGACACTACAAAGCTAACTAACACAAGTACCGTTCTATAC | + |
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Preference number: 1 (lower is better) Translates to: VSWVPHFPSDHRCSS*TDTTKLTNTSTVLY Trigger: GTATAGAACGGTACTTGTGTTAGTTAGCTTTGTAGTGTCAGTCCAGGAAGAACATCTGTGGTCACTGGGAAAGTGGGGGACCCATGAGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR CCA 90 bp | CTTCTCCCTTTAAAAAGGTATTTTAGGGCTGGAGAGATGGCTCAGTaGTTAAGAGCACTGACTGCTCTTCTGAAGGTCCTGAGTTCAAAT | + |
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Preference number: 1 (lower is better) Translates to: LLPLKRYFRAGEMAQ*LRALTALLKVLSSN Trigger: ATTTGAACTCAGGACCTTCAGAAGAGCAGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCTAAAATACCTTTTTAAAGGGAGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR CCA 90 bp | ACTAAAAAGTCATCCTTGACCACACAGCAAGTTCAAAGGCTAATCTaGGCTATAAAGAATCCCGTCATTTGTTTGTTTGTTGACACAGGG | + |
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Preference number: 1 (lower is better) Translates to: TKKSSLTTQQVQRLI*AIKNPVICLFVDTG Trigger: CCCTGTGTCAACAAACAAACAAATGACGGGATTCTTTATAGCCCAGATTAGCCTTTGAACTTGCTGTGTGGTCAAGGATGACTTTTTAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR-3UTR GCA 90 bp | GGGTTCTGGGGACCAAGCTCGGGCCCTTGCACTTGTGTGGCAAGCACTTTCACCAGTGGGATGAGACTGTaGCCACAGAGCCCTGGCTCC | + |
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Preference number: 2 (lower is better) Translates to: GFWGPSSGPCTCVASTFTSGMRL*PQSPGS Trigger: GGAGCCAGGGCTCTGTGGGCACAGTCTCATCCCACT...GGTGAAAGTGCTTGCCACACAAGTGCAAGGGCCCGAGCTTGGTCCCCAGAACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR-3UTR GCA 90 bp | GGGTTCTGGGGACCAAGCTCGGGCCCTTGCACTTGTGTGGCAAGCACTTTCACCCTGCATCTGAGTCAGTaGCCCTCCCTGCCCACAGTC | + |
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Preference number: 2 (lower is better) Translates to: GFWGPSSGPCTCVASTFTLHLSQ*PSLPTV Trigger: GACTGTGGGCAGGGAGGGGCACTGACTCAGATGCAG...GGTGAAAGTGCTTGCCACACAAGTGCAAGGGCCCGAGCTTGGTCCCCAGAACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR-3UTR GCA 90 bp | GACTCACACTGGGAAGCAGGGCTCCCCTTTCCCTACCCATCCCTCCTAGTTGGCCTCTTAAGTCCCATCTaGGCGTCCCAGTGCCCACTG | + |
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Preference number: 2 (lower is better) Translates to: DSHWEAGLPFPYPSLLVGLLSPI*ASQCPL Trigger: CAGTGGGCACTGGGACGCGCAGATGGGACTTAAGAG...GCCAACTAGGAGGGATGGGTAGGGAAAGGGGAGCCCTGCTTCCCAGTGTGAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR-3UTR TCA 90 bp | GACTCACACTGGGAAGCAGGGCTCCCCTTTCCCTACCCATCCCTCCTAGTTGGCCCTGGTAGTCACCACTaGGAGGATCAGGTGACAAGG | + |
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Preference number: 2 (lower is better) Translates to: DSHWEAGLPFPYPSLLVGPGSHH*EDQVTR Trigger: CCTTGTCACCTGATCCTCTCAGTGGTGACTACCAGG...GCCAACTAGGAGGGATGGGTAGGGAAAGGGGAGCCCTGCTTCCCAGTGTGAGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR-3UTR TCA 90 bp | GGGTTCTGGGGACCAAGCTCGGGCCCTTGCACTTGTGTGGCAAGCACTTTCACCTTGGGCCACCCACAATaGGTGACTCACACTGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: GFWGPSSGPCTCVASTFTLGHPQ*VTHTGK Trigger: CTTCCCAGTGTGAGTCACTCATTGTGGGTGGCCCAA...GGTGAAAGTGCTTGCCACACAAGTGCAAGGGCCCGAGCTTGGTCCCCAGAACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR-3UTR CCA 90 bp | CGGGCCCTTGCACTTGTGTGGCAAGCACTTTCACCCACTGAGCCTCCTCTCCAGGTGCCCACAGAGCCCTaGCTCCTGCTCATCTTTAGT | + |
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Preference number: 2 (lower is better) Translates to: RALALVWQALSPTEPPLQVPTEP*LLLIFS Trigger: ACTAAAGATGAGCAGGAGCCAGGGCTCTGTGGGCAC...CTGGAGAGGAGGCTCAGTGGGTGAAAGTGCTTGCCACACAAGTGCAAGGGCCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR-3UTR CCA 90 bp | CGGGCCCTTGCACTTGTGTGGCAAGCACTTTCACCCACTGAGCCTCCTCTCCAGAACCACTGGTGGGTTTaGGGTTATGGCCTGGGACAG | + |
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Preference number: 2 (lower is better) Translates to: RALALVWQALSPTEPPLQNHWWV*GYGLGQ Trigger: CTGTCCCAGGCCATAACCCCAAACCCACCAGTGGTT...CTGGAGAGGAGGCTCAGTGGGTGAAAGTGCTTGCCACACAAGTGCAAGGGCCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR-3UTR CCA 90 bp | GGGTTCTGGGGACCAAGCTCGGGCCCTTGCACTTGTGTGGCAAGCACTTTCACCGGGAGGTTGGGAGGATaGACAGTTGGATGGGTGAGT | + |
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Preference number: 2 (lower is better) Translates to: GFWGPSSGPCTCVASTFTGRLGG*TVGWVS Trigger: ACTCACCCATCCAACTGTCCATCCTCCCAACCTCCC...GGTGAAAGTGCTTGCCACACAAGTGCAAGGGCCCGAGCTTGGTCCCCAGAACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR CAA 90 bp | CCTGGCTCCTGCTCATCTTTAGTGAAGCCACTGAGGCTCATGACATaGAGGGCAGCAGCCAGCAGGGAGCCTTGGAACCTGGTAGTCACC | + |
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Preference number: 2 (lower is better) Translates to: PGSCSSLVKPLRLMT*RAAASREPWNLVVT Trigger: GGTGACTACCAGGTTCCAAGGCTCCCTGCTGGCTGCTGCCCTCAATGTCATGAGCCTCAGTGGCTTCACTAAAGATGAGCAGGAGCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR-3UTR TCA 90 bp | CATCCTACCACTCTGGGGGCAGCTTACCCTAGGAGTTGCTTCTGGCACAGTGTTAGAGAGCCAGTGGGATaGGACTGTGCCCACAGAGCC | + |
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Preference number: 2 (lower is better) Translates to: HPTTLGAAYPRSCFWHSVREPVG*DCAHRA Trigger: GGCTCTGTGGGCACAGTCTCATCCCACTGGCTCTCT...AACACTGTGCCAGAAGCAACTCCTAGGGTAAGCTGCCCCCAGAGTGGTAGGATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR-3UTR CCA 90 bp | CGGGCCCTTGCACTTGTGTGGCAAGCACTTTCACCCACTGAGCCTCCTCTCCAGTTTGGGGTTATGGCCTaGGACAGAGCTGAGAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: RALALVWQALSPTEPPLQFGVMA*DRAESR Trigger: TCTGCTCTCAGCTCTGTCCCAGGCCATAACCCCAAA...CTGGAGAGGAGGCTCAGTGGGTGAAAGTGCTTGCCACACAAGTGCAAGGGCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR-3UTR CCA 90 bp | GGGTTCTGGGGACCAAGCTCGGGCCCTTGCACTTGTGTGGCAAGCACTTTCACCAATGAAAGATGCCCTTaGGCTGATCTGGCCCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: GFWGPSSGPCTCVASTFTNERCP*ADLAQA Trigger: TGCCTGGGCCAGATCAGCCCAAGGGCATCTTTCATT...GGTGAAAGTGCTTGCCACACAAGTGCAAGGGCCCGAGCTTGGTCCCCAGAACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR-3UTR TCA 90 bp | TCTGCCTCCCAAGTGCTAGGATCAAAGGTGTGCACCACCACCCAGCAAGAATTCAGAGGAATTTGCCCCTaGCCTTGGTGCCACGGGCCA | + |
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Preference number: 2 (lower is better) Translates to: SASQVLGSKVCTTTQQEFRGICP*PWCHGP Trigger: TGGCCCGTGGCACCAAGGTCAGGGGCAAATTCCTCT...GAATTCTTGCTGGGTGGTGGTGCACACCTTTGATCCTAGCACTTGGGAGGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR-3UTR TCA 90 bp | CGGGCCCTTGCACTTGTGTGGCAAGCACTTTCACCCACTGAGCCTCCTCTCCAGCCTAAAGCAGAGGGGTaGATAGAGAAGGCCATGTCT | + |
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Preference number: 2 (lower is better) Translates to: RALALVWQALSPTEPPLQPKAEG*IEKAMS Trigger: AGACATGGCCTTCTCTATTCACCCCTCTGCTTTAGG...CTGGAGAGGAGGCTCAGTGGGTGAAAGTGCTTGCCACACAAGTGCAAGGGCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR-3UTR CCA 90 bp | CCGAAGGTCCTGAGTTCAAAGCCCAGCAACCACATGGTGGCTCACAACCATCCGTGTGGCACACACCTTTaGAGGCAGAGGCAGGCAGAT | + |
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Preference number: 2 (lower is better) Translates to: PKVLSSKPSNHMVAHNHPCGTHL*RQRQAD Trigger: ATCTGCCTGCCTCTGCCTCCAAAGGTGTGTGCCACA...CGGATGGTTGTGAGCCACCATGTGGTTGCTGGGCTTTGAACTCAGGACCTTCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR-3UTR CCA 90 bp | GACTCACACTGGGAAGCAGGGCTCCCCTTTCCCTACCCATCCCTCCTAGTTGGCGAAAAGAACCACTGGTaGGTTTGGGGTTATGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: DSHWEAGLPFPYPSLLVGEKNHW*VWGYGL Trigger: CAGGCCATAACCCCAAACCCACCAGTGGTTCTTTTC...GCCAACTAGGAGGGATGGGTAGGGAAAGGGGAGCCCTGCTTCCCAGTGTGAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR-3UTR TCA 90 bp | TGTACCCATAGTCCCTACTGTCCTGACACATTTCCCACACACCGTGGAACCTGGTCCTTCCCAACCCCTTaGACCCCAAAGGCTCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: CTHSPYCPDTFPTHRGTWSFPTP*TPKAPL Trigger: CAGAGGAGCCTTTGGGGTTCAAGGGGTTGGGAAGGA...CCAGGTTCCACGGTGTGTGGGAAATGTGTCAGGACAGTAGGGACTATGGGTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR-3UTR GCA 90 bp | ATGAAAACTGCCTCTGACTGGGCACTTGGGCCACCCACAATGAGTGACTCACACAGACCTGCCTGCCTCTaGCTCCCAAGTGCTAGGATC | + |
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Preference number: 2 (lower is better) Translates to: MKTASDWALGPPTMSDSHRPACL*LPSARI Trigger: GATCCTAGCACTTGGGAGGCAGAGGCAGGCAGGTCT...GTGTGAGTCACTCATTGTGGGTGGCCCAAGTGCCCAGTCAGAGGCAGTTTTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR-3UTR GCA 90 bp | GGGCGTAGCCCTCTATTTTTGGCCACAGCATCCCTACTTCCCCTCTTAAGACTCACTCAGAGACCTGCCTaGCTCTGCCTCCCAAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: GRSPLFLATASLLPLLRLTQRPA*LCLPSA Trigger: AGCACTTGGGAGGCAGAGGCAGGCAGGTCTCTGAGT...GAGTCTTAAGAGGGGAAGTAGGGATGCTGTGGCCAAAAATAGAGGGCTACGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR-3UTR GCA 90 bp | GCATCCCTACTTCCCCTCTTAAGACTCTTAAGTCCCATCTGCGCGTCCCAGTGCTCAAACTCAGAGACCTaGCTGCCTCTGCCTCCCAAG | + |
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Preference number: 2 (lower is better) Translates to: ASLLPLLRLLSPICASQCSNSET*LPLPPK Trigger: CTTGGGAGGCAGAGGCAGGCAGGTCTCTGAGTTTGA...GCACTGGGACGCGCAGATGGGACTTAAGAGTCTTAAGAGGGGAAGTAGGGATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR-3UTR GCA 90 bp | ATGAAAACTGCCTCTGACTGGGCACTTGGGCCACCCACAATGAGTGACTCACACCTCTTAAGTCCCATCTaGGCGTCCCAGTGCCCACTG | + |
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Preference number: 2 (lower is better) Translates to: MKTASDWALGPPTMSDSHLLSPI*ASQCPL Trigger: CAGTGGGCACTGGGACGCGCAGATGGGACTTAAGAG...GTGTGAGTCACTCATTGTGGGTGGCCCAAGTGCCCAGTCAGAGGCAGTTTTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR-3UTR GCA 90 bp | CATCCTACCACTCTGGGGGCAGCTTACCCTAGGAGTTGCTTCTGGCACAGTGTTCAGAGCCCTGGCTCCTaGTCATCTTTAGTGAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: HPTTLGAAYPRSCFWHSVQSPGS*SSLVKP Trigger: TGGCTTCACTAAAGATGAGCAGGAGCCAGGGCTCTG...AACACTGTGCCAGAAGCAACTCCTAGGGTAAGCTGCCCCCAGAGTGGTAGGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR-3UTR GCA 90 bp | CCTACCACTCTGGGGGCAGCTTACCCTAGGAGTTGCTTCTGGCACAGTGTTAAGCAGAGCCCTGGCTCCTaGTCATCTTTAGTGAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: PTTLGAAYPRSCFWHSVKQSPGS*SSLVKP Trigger: TGGCTTCACTAAAGATGAGCAGGAGCCAGGGCTCTG...CTTAACACTGTGCCAGAAGCAACTCCTAGGGTAAGCTGCCCCCAGAGTGGTAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR-3UTR GCA 90 bp | GGGCGTAGCCCTCTATTTTTGGCCACAGCATCCCTACTTCCCCTCTTAAGACTCTCAAACTCAGAGACCTaGCTGCCTCTGCCTCCCAAG | + |
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Preference number: 2 (lower is better) Translates to: GRSPLFLATASLLPLLRLSNSET*LPLPPK Trigger: CTTGGGAGGCAGAGGCAGGCAGGTCTCTGAGTTTGA...GAGTCTTAAGAGGGGAAGTAGGGATGCTGTGGCCAAAAATAGAGGGCTACGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR-3UTR GCA 90 bp | CGGGCCCTTGCACTTGTGTGGCAAGCACTTTCACCCACTGAGCCTCCTCTCCAGAGGGGTTTTGTCCTATaGTTCCCTGTTTCCAGTCTT | + |
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Preference number: 2 (lower is better) Translates to: RALALVWQALSPTEPPLQRGFVL*FPVSSL Trigger: AAGACTGGAAACAGGGAAGCATAGGACAAAACCCCT...CTGGAGAGGAGGCTCAGTGGGTGAAAGTGCTTGCCACACAAGTGCAAGGGCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR-3UTR CCA 90 bp | GGGCGTAGCCCTCTATTTTTGGCCACAGCATCCCTACTTCCCCTCTTAAGACTCAACCACTGGTGGGTTTaGGGTTATGGCCTGGGACAG | + |
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Preference number: 2 (lower is better) Translates to: GRSPLFLATASLLPLLRLNHWWV*GYGLGQ Trigger: CTGTCCCAGGCCATAACCCCAAACCCACCAGTGGTT...GAGTCTTAAGAGGGGAAGTAGGGATGCTGTGGCCAAAAATAGAGGGCTACGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR-3UTR TCA 90 bp | CTCTTTCAAGAGAAAAGAACCACTGGTGGGTTTGGGGTTATGGCCTGGGACAGACCTGGTAGTCACCACTaGGAGGATCAGGTGACAAGG | + |
|
Preference number: 2 (lower is better) Translates to: LFQEKRTTGGFGVMAWDRPGSHH*EDQVTR Trigger: CCTTGTCACCTGATCCTCTCAGTGGTGACTACCAGG...TCTGTCCCAGGCCATAACCCCAAACCCACCAGTGGTTCTTTTCTCTTGAAAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| 3UTR-3UTR CCA 90 bp | TCTGCCTCCCAAGTGCTAGGATCAAAGGTGTGCACCACCACCCAGCAAGAATTCGGAGAGATGGCTCAGTaGTTAAGAGTACCGACTGCT | + |
|
Preference number: 2 (lower is better) Translates to: SASQVLGSKVCTTTQQEFGEMAQ*LRVPTA Trigger: AGCAGTCGGTACTCTTAACCACTGAGCCATCTCTCC...GAATTCTTGCTGGGTGGTGGTGCACACCTTTGATCCTAGCACTTGGGAGGCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| 3UTR-3UTR CCA 90 bp | CATCCTACCACTCTGGGGGCAGCTTACCCTAGGAGTTGCTTCTGGCACAGTGTTGTTGTAAGAAGTGGCTaGAGAGATGGCTCAGTGGTT | + |
|
Preference number: 2 (lower is better) Translates to: HPTTLGAAYPRSCFWHSVVVRSG*RDGSVV Trigger: AACCACTGAGCCATCTCTCCAGCCACTTCTTACAAC...AACACTGTGCCAGAAGCAACTCCTAGGGTAAGCTGCCCCCAGAGTGGTAGGATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| 3UTR-3UTR CCA 90 bp | GCATCCCTACTTCCCCTCTTAAGACTCTTAAGTCCCATCTGCGCGTCCCAGTGCGTTGTAAGAAGTGGCTaGAGAGATGGCTCAGTGGTT | + |
|
Preference number: 2 (lower is better) Translates to: ASLLPLLRLLSPICASQCVVRSG*RDGSVV Trigger: AACCACTGAGCCATCTCTCCAGCCACTTCTTACAAC...GCACTGGGACGCGCAGATGGGACTTAAGAGTCTTAAGAGGGGAAGTAGGGATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| 3UTR-3UTR TCA 90 bp | TCTGCCTCCCAAGTGCTAGGATCAAAGGTGTGCACCACCACCCAGCAAGAATTCTTCTGGTTTACAGAGTaGGTTCCAGGACAGCCAAAG | + |
|
Preference number: 2 (lower is better) Translates to: SASQVLGSKVCTTTQQEFFWFTE*VPGQPK Trigger: CTTTGGCTGTCCTGGAACTCACTCTGTAAACCAGAA...GAATTCTTGCTGGGTGGTGGTGCACACCTTTGATCCTAGCACTTGGGAGGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| 3UTR-3UTR CCA 90 bp | GTTCTATACGAACCATGTCAATTCCCAGAGCCCCAAAAGAGCAGCATCGATGTCGTGCCCACAGAGCCCTaGCTCCTGCTCATCTTTAGT | + |
|
Preference number: 2 (lower is better) Translates to: VLYEPCQFPEPQKSSIDVVPTEP*LLLIFS Trigger: ACTAAAGATGAGCAGGAGCCAGGGCTCTGTGGGCAC...GACATCGATGCTGCTCTTTTGGGGCTCTGGGAATTGACATGGTTCGTATAGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| 3UTR-3UTR CCA 90 bp | CCGAAGGTCCTGAGTTCAAAGCCCAGCAACCACATGGTGGCTCACAACCATCCGCACAGATGTTCTTCCTaGACTGACACTACAAAGCTA | + |
|
Preference number: 2 (lower is better) Translates to: PKVLSSKPSNHMVAHNHPHRCSS*TDTTKL Trigger: TAGCTTTGTAGTGTCAGTCCAGGAAGAACATCTGTG...CGGATGGTTGTGAGCCACCATGTGGTTGCTGGGCTTTGAACTCAGGACCTTCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| 3UTR-3UTR CCA 90 bp | GCCACAGCATCCCTACTTCCCCTCTTAAGACTCTTAAGTCCCATCTGCGCGTCCCCTAGGAGTTGCTTCTaGCACAGTGTTAAGAGTTGT | + |
|
Preference number: 2 (lower is better) Translates to: ATASLLPLLRLLSPICASPRSCF*HSVKSC Trigger: ACAACTCTTAACACTGTGCCAGAAGCAACTCCTAGG...GGACGCGCAGATGGGACTTAAGAGTCTTAAGAGGGGAAGTAGGGATGCTGTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| 3UTR-3UTR CCA 90 bp | TGTACCCATAGTCCCTACTGTCCTGACACATTTCCCACACACCGTGGAACCTGGCTAAAGGATTCAGGCTaGAGAAGAAAGCCCTTCCTG | + |
|
Preference number: 2 (lower is better) Translates to: CTHSPYCPDTFPTHRGTWLKDSG*RRKPFL Trigger: CAGGAAGGGCTTTCTTCTCCAGCCTGAATCCTTTAG...CCAGGTTCCACGGTGTGTGGGAAATGTGTCAGGACAGTAGGGACTATGGGTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| 3UTR CAA 90 bp | CTAAACCTTTGTGTCCGAGCTGTTCATGGGCGTAGCCCTCTATTTTaGGCCACAGCATCCCTACTTCCCCTCTTAAGACTCTTAAGTCCC | + |
|
Preference number: 2 (lower is better) Translates to: LNLCVRAVHGRSPLF*ATASLLPLLRLLSP Trigger: GGGACTTAAGAGTCTTAAGAGGGGAAGTAGGGATGCTGTGGCCAAAAATAGAGGGCTACGCCCATGAACAGCTCGGACACAAAGGTTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| 3UTR-3UTR GCA 90 bp | ATGAAAACTGCCTCTGACTGGGCACTTGGGCCACCCACAATGAGTGACTCACACGAAGAAAGCCCTTCCTaGCATGATGATAATGGACTG | + |
|
Preference number: 2 (lower is better) Translates to: MKTASDWALGPPTMSDSHEESPS*HDDNGL Trigger: CAGTCCATTATCATCATGGCAGGAAGGGCTTTCTTC...GTGTGAGTCACTCATTGTGGGTGGCCCAAGTGCCCAGTCAGAGGCAGTTTTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| 3UTR-3UTR CCA 90 bp | TCTGCCTCCCAAGTGCTAGGATCAAAGGTGTGCACCACCACCCAGCAAGAATTCCCTAGGAGTTGCTTCTaGCACAGTGTTAAGAGTTGT | + |
|
Preference number: 2 (lower is better) Translates to: SASQVLGSKVCTTTQQEFPRSCF*HSVKSC Trigger: ACAACTCTTAACACTGTGCCAGAAGCAACTCCTAGG...GAATTCTTGCTGGGTGGTGGTGCACACCTTTGATCCTAGCACTTGGGAGGCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| 3UTR-3UTR TCA 90 bp | ATCTGGGCTATAAAGAATCCCGTCATTTGTTTGTTTGTTGACACAGGGTTTCTCAGAGAGCCAGTGGGATaGGACTGTGCCCACAGAGCC | + |
|
Preference number: 2 (lower is better) Translates to: IWAIKNPVICLFVDTGFLREPVG*DCAHRA Trigger: GGCTCTGTGGGCACAGTCTCATCCCACTGGCTCTCT...GAGAAACCCTGTGTCAACAAACAAACAAATGACGGGATTCTTTATAGCCCAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| 3UTR-3UTR TCA 90 bp | GGGCGTAGCCCTCTATTTTTGGCCACAGCATCCCTACTTCCCCTCTTAAGACTCAAACATAGTGAGATCTaGTGCCCTTTTCTGGAGTGT | + |
|
Preference number: 2 (lower is better) Translates to: GRSPLFLATASLLPLLRLKHSEI*CPFLEC Trigger: ACACTCCAGAAAAGGGCATCAGATCTCACTATGTTT...GAGTCTTAAGAGGGGAAGTAGGGATGCTGTGGCCAAAAATAGAGGGCTACGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| 3UTR-3UTR TCA 90 bp | GCCACAGCATCCCTACTTCCCCTCTTAAGACTCTTAAGTCCCATCTGCGCGTCCCATTTGTTTGTTTGTTaGCACAGGGTTTCTCTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: ATASLLPLLRLLSPICASHLFVC*HRVSLC Trigger: ACACAGAGAAACCCTGTGTCAACAAACAAACAAATG...GGACGCGCAGATGGGACTTAAGAGTCTTAAGAGGGGAAGTAGGGATGCTGTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| 3UTR-3UTR CCA 90 bp | GGGCGTAGCCCTCTATTTTTGGCCACAGCATCCCTACTTCCCCTCTTAAGACTCCACAGATGTTCTTCCTaGACTGACACTACAAAGCTA | + |
|
Preference number: 2 (lower is better) Translates to: GRSPLFLATASLLPLLRLHRCSS*TDTTKL Trigger: TAGCTTTGTAGTGTCAGTCCAGGAAGAACATCTGTG...GAGTCTTAAGAGGGGAAGTAGGGATGCTGTGGCCAAAAATAGAGGGCTACGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| 3UTR CAA 90 bp | GGCTCCTGTGCCATGGTGTGGAGGTCAGAGGACAACTCTGTATACTaGGTCCTCTCCTTCCATCTTTATATGAATTCTAGGGACCAAACT | + |
|
Preference number: 2 (lower is better) Translates to: GSCAMVWRSEDNSVY*VLSFHLYMNSRDQT Trigger: AGTTTGGTCCCTAGAATTCATATAAAGATGGAAGGAGAGGACCAAGTATACAGAGTTGTCCTCTGACCTCCACACCATGGCACAGGAGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| 3UTR-3UTR TCA 90 bp | TGTACCCATAGTCCCTACTGTCCTGACACATTTCCCACACACCGTGGAACCTGGCTAAAAAGTCATCCTTaGCCACACAGCAAGTTCAAA | + |
|
Preference number: 2 (lower is better) Translates to: CTHSPYCPDTFPTHRGTWLKSHP*PHSKFK Trigger: TTTGAACTTGCTGTGTGGTCAAGGATGACTTTTTAG...CCAGGTTCCACGGTGTGTGGGAAATGTGTCAGGACAGTAGGGACTATGGGTACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| 3UTR-3UTR GCA 90 bp | CTCTTTCAAGAGAAAAGAACCACTGGTGGGTTTGGGGTTATGGCCTGGGACAGAGAAGAAAGCCCTTCCTaGCATGATGATAATGGACTG | + |
|
Preference number: 2 (lower is better) Translates to: LFQEKRTTGGFGVMAWDREESPS*HDDNGL Trigger: CAGTCCATTATCATCATGGCAGGAAGGGCTTTCTTC...TCTGTCCCAGGCCATAACCCCAAACCCACCAGTGGTTCTTTTCTCTTGAAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| 3UTR-3UTR TCA 90 bp | TCTGCCTCCCAAGTGCTAGGATCAAAGGTGTGCACCACCACCCAGCAAGAATTCTTTTTCTCTGTGAGATaGAGGAGTTGGTGTTTAGTA | + |
|
Preference number: 2 (lower is better) Translates to: SASQVLGSKVCTTTQQEFFFSVR*RSWCLV Trigger: TACTAAACACCAACTCCTTCATCTCACAGAGAAAAA...GAATTCTTGCTGGGTGGTGGTGCACACCTTTGATCCTAGCACTTGGGAGGCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| 3UTR-3UTR CCA 90 bp | TTAAAAAGGTATTTTAGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTAGAAGCCAGGCATTGTaGCACACACCTTTGGAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: LKRYFRAGEMAQWLRALTRSQAL*HTPLEA Trigger: TGCCTCCAAAGGTGTGTGCCACAATGCCTGGCTTCT...AGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCTAAAATACCTTTTTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR-3UTR CCA 90 bp | TCTGCCTCCCAAGTGCTAGGATCAAAGGTGTGCACCACCACCCAGCAAGAATTCGTAAGAAAAATCATTTaGGCAGATCAAACCATTGGT | + |
|
Preference number: 2 (lower is better) Translates to: SASQVLGSKVCTTTQQEFVRKII*ADQTIG Trigger: ACCAATGGTTTGATCTGCCCAAATGATTTTTCTTAC...GAATTCTTGCTGGGTGGTGGTGCACACCTTTGATCCTAGCACTTGGGAGGCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR-3UTR CCA 90 bp | TGTACCCATAGTCCCTACTGTCCTGACACATTTCCCACACACCGTGGAACCTGGGTAAGAAAAATCATTTaGGCAGATCAAACCATTGGT | + |
|
Preference number: 2 (lower is better) Translates to: CTHSPYCPDTFPTHRGTWVRKII*ADQTIG Trigger: ACCAATGGTTTGATCTGCCCAAATGATTTTTCTTAC...CCAGGTTCCACGGTGTGTGGGAAATGTGTCAGGACAGTAGGGACTATGGGTACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR-3UTR TCA 90 bp | TTAAAAAGGTATTTTAGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTTGTTTAGTACCTCCATaGCTCCCCTTCCTTTGTAGT | + |
|
Preference number: 2 (lower is better) Translates to: LKRYFRAGEMAQWLRALTCLVPP*LPFLCS Trigger: ACTACAAAGGAAGGGGAGTCATGGAGGTACTAAACA...AGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCTAAAATACCTTTTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR-3UTR CCA 90 bp | ATCTGGGCTATAAAGAATCCCGTCATTTGTTTGTTTGTTGACACAGGGTTTCTCATCAAGAACAGCAGTTaGTATGTCCTTCCCAACCCC | + |
|
Preference number: 2 (lower is better) Translates to: IWAIKNPVICLFVDTGFLIKNSS*YVLPNP Trigger: GGGGTTGGGAAGGACATACCAACTGCTGTTCTTGAT...GAGAAACCCTGTGTCAACAAACAAACAAATGACGGGATTCTTTATAGCCCAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR-3UTR TCA 90 bp | ATCTGGGCTATAAAGAATCCCGTCATTTGTTTGTTTGTTGACACAGGGTTTCTCAAACATAGTGAGATCTaGTGCCCTTTTCTGGAGTGT | + |
|
Preference number: 2 (lower is better) Translates to: IWAIKNPVICLFVDTGFLKHSEI*CPFLEC Trigger: ACACTCCAGAAAAGGGCATCAGATCTCACTATGTTT...GAGAAACCCTGTGTCAACAAACAAACAAATGACGGGATTCTTTATAGCCCAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR CCA 72 bp | TGGGCACTTGGGCCACCCACAATGAGTGACTCACACTaGGAAGCAGGGCTCCCCTTTCCCTACCCATCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: WALGPPTMSDSH*EAGLPFPYPSL Trigger: GAGGGATGGGTAGGGAAAGGGGAGCCCTGCTTCCCAGTGTGAGTCACTCATTGTGGGTGGCCCAAGTGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR CCA 72 bp | GGTTCTGGGGACCAAGCTCGGGCCCTTGCACTTGTGTaGCAAGCACTTTCACCCACTGAGCCTCCTCTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: GSGDQARALALV*QALSPTEPPLQ Trigger: CTGGAGAGGAGGCTCAGTGGGTGAAAGTGCTTGCCACACAAGTGCAAGGGCCCGAGCTTGGTCCCCAGAACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| 3UTR-3UTR CAA 90 bp | GACTCACACTGGGAAGCAGGGCTCCCCTTTCCCTACCCATCCCTCCTAGTTGGCTTGTGGCACACACCTTaGGAGGCAGAGGCAGGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: DSHWEAGLPFPYPSLLVGLWHTP*EAEAGR Trigger: TCTGCCTGCCTCTGCCTCCAAAGGTGTGTGCCACAA...GCCAACTAGGAGGGATGGGTAGGGAAAGGGGAGCCCTGCTTCCCAGTGTGAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR-3UTR CAA 90 bp | GGGTTCTGGGGACCAAGCTCGGGCCCTTGCACTTGTGTGGCAAGCACTTTCACCGTCCTTCCCAACCCCTaGAACCCCAAAGGCTCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: GFWGPSSGPCTCVASTFTVLPNP*NPKGSS Trigger: AGAGGAGCCTTTGGGGTTCAAGGGGTTGGGAAGGAC...GGTGAAAGTGCTTGCCACACAAGTGCAAGGGCCCGAGCTTGGTCCCCAGAACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR-3UTR CAA 90 bp | CCTACCACTCTGGGGGCAGCTTACCCTAGGAGTTGCTTCTGGCACAGTGTTAAGAGCCAGCAGGGAGCCTaGGAACCTGGTAGTCACCAC | + |
|
Preference number: 3 (lower is better) Translates to: PTTLGAAYPRSCFWHSVKSQQGA*EPGSHH Trigger: GTGGTGACTACCAGGTTCCAAGGCTCCCTGCTGGCT...CTTAACACTGTGCCAGAAGCAACTCCTAGGGTAAGCTGCCCCCAGAGTGGTAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR-3UTR CAA 90 bp | GCCACAGCATCCCTACTTCCCCTCTTAAGACTCTTAAGTCCCATCTGCGCGTCCAGCCAGCAGGGAGCCTaGGAACCTGGTAGTCACCAC | + |
|
Preference number: 3 (lower is better) Translates to: ATASLLPLLRLLSPICASSQQGA*EPGSHH Trigger: GTGGTGACTACCAGGTTCCAAGGCTCCCTGCTGGCT...GGACGCGCAGATGGGACTTAAGAGTCTTAAGAGGGGAAGTAGGGATGCTGTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| 3UTR-3UTR CAA 90 bp | ATGAAAACTGCCTCTGACTGGGCACTTGGGCCACCCACAATGAGTGACTCACACCTGAGGCTCATGACATaGAGGGCAGCAGCCAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: MKTASDWALGPPTMSDSHLRLMT*RAAASR Trigger: CCTGCTGGCTGCTGCCCTCAATGTCATGAGCCTCAG...GTGTGAGTCACTCATTGTGGGTGGCCCAAGTGCCCAGTCAGAGGCAGTTTTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| 3UTR-3UTR CAA 90 bp | CCGAAGGTCCTGAGTTCAAAGCCCAGCAACCACATGGTGGCTCACAACCATCCGCCACGGGCCAGGCTTTaGTCCTCAGAGCTTAGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: PKVLSSKPSNHMVAHNHPPRARL*SSELRF Trigger: AAACCTAAGCTCTGAGGACAAAAGCCTGGCCCGTGG...CGGATGGTTGTGAGCCACCATGTGGTTGCTGGGCTTTGAACTCAGGACCTTCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| 3UTR-3UTR CAA 90 bp | GCATCCCTACTTCCCCTCTTAAGACTCTTAAGTCCCATCTGCGCGTCCCAGTGCGTCCTTCCCAACCCCTaGAACCCCAAAGGCTCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: ASLLPLLRLLSPICASQCVLPNP*NPKGSS Trigger: AGAGGAGCCTTTGGGGTTCAAGGGGTTGGGAAGGAC...GCACTGGGACGCGCAGATGGGACTTAAGAGTCTTAAGAGGGGAAGTAGGGATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| 3UTR-3UTR CAA 90 bp | GGGTTCTGGGGACCAAGCTCGGGCCCTTGCACTTGTGTGGCAAGCACTTTCACCCGTAGCCCTCTATTTTaGGCCACAGCATCCCTACTT | + |
|
Preference number: 3 (lower is better) Translates to: GFWGPSSGPCTCVASTFTRSPLF*ATASLL Trigger: AAGTAGGGATGCTGTGGCCAAAAATAGAGGGCTACG...GGTGAAAGTGCTTGCCACACAAGTGCAAGGGCCCGAGCTTGGTCCCCAGAACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| 3UTR CCA 72 bp | TTGTGGGAGTGGGAGAGGGGCTCCTGTGCCATGGTGTaGAGGTCAGAGGACAACTCTGTATACTTGGTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: LWEWERGSCAMV*RSEDNSVYLVL Trigger: GAGGACCAAGTATACAGAGTTGTCCTCTGACCTCCACACCATGGCACAGGAGCCCCTCTCCCACTCCCACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| 3UTR-3UTR CAA 90 bp | GCATCCCTACTTCCCCTCTTAAGACTCTTAAGTCCCATCTGCGCGTCCCAGTGCCCACGGGCCAGGCTTTaGTCCTCAGAGCTTAGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: ASLLPLLRLLSPICASQCPRARL*SSELRF Trigger: AAACCTAAGCTCTGAGGACAAAAGCCTGGCCCGTGG...GCACTGGGACGCGCAGATGGGACTTAAGAGTCTTAAGAGGGGAAGTAGGGATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| 3UTR GCA 72 bp | AGTGGGATGAGACTGTGCCCACAGAGCCCTGGCTCCTaGTCATCTTTAGTGAAGCCACTGAGGCTCATGACA | + |
|
Preference number: 3 (lower is better) Translates to: SGMRLCPQSPGS*SSLVKPLRLMT Trigger: TGTCATGAGCCTCAGTGGCTTCACTAAAGATGAGCAGGAGCCAGGGCTCTGTGGGCACAGTCTCATCCCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| 3UTR-3UTR CAA 90 bp | GGGTTCTGGGGACCAAGCTCGGGCCCTTGCACTTGTGTGGCAAGCACTTTCACCTGTGAGATGAAGGAGTaGGTGTTTAGTACCTCCATG | + |
|
Preference number: 3 (lower is better) Translates to: GFWGPSSGPCTCVASTFTCEMKE*VFSTSM Trigger: CATGGAGGTACTAAACACCAACTCCTTCATCTCACA...GGTGAAAGTGCTTGCCACACAAGTGCAAGGGCCCGAGCTTGGTCCCCAGAACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| 3UTR CCA 72 bp | CCTGACACATTTCCCACACACCGTGGAACCTGGCTTTaGGCGTGTATCCATCCGTGTATGTGTGTTTCCCCT | + |
|
Preference number: 3 (lower is better) Translates to: PDTFPTHRGTWL*ACIHPCMCVSP Trigger: AGGGGAAACACACATACACGGATGGATACACGCCCAAAGCCAGGTTCCACGGTGTGTGGGAAATGTGTCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| 3UTR-3UTR CAA 90 bp | CTCTTTCAAGAGAAAAGAACCACTGGTGGGTTTGGGGTTATGGCCTGGGACAGATTGTGGCACACACCTTaGGAGGCAGAGGCAGGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: LFQEKRTTGGFGVMAWDRLWHTP*EAEAGR Trigger: TCTGCCTGCCTCTGCCTCCAAAGGTGTGTGCCACAA...TCTGTCCCAGGCCATAACCCCAAACCCACCAGTGGTTCTTTTCTCTTGAAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| 3UTR TCA 72 bp | TCAAGAACAGCAGTTGGTATGTCCTTCCCAACCCCTTaGACCCCAAAGGCTCCTCTGACTTCAAAGCTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: SRTAVGMSFPTP*TPKAPLTSKLG Trigger: GCCCAGCTTTGAAGTCAGAGGAGCCTTTGGGGTTCAAGGGGTTGGGAAGGACATACCAACTGCTGTTCTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| 3UTR TCA 72 bp | CACATGCACAGGCGGAGGAGGGTGGGGTACATGAACTaGAATCTAAAGGATTCAGGCTGGAGAAGAAAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: HMHRRRRVGYMN*NLKDSGWRRKP Trigger: GGGCTTTCTTCTCCAGCCTGAATCCTTTAGATTTCAGTTCATGTACCCCACCCTCCTCCGCCTGTGCATGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| 3UTR CCA 72 bp | ACCACTCTGGGGGCAGCTTACCCTAGGAGTTGCTTCTaGCACAGTGTTAAGAGTTGTAAGAAGTGGCTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: TTLGAAYPRSCF*HSVKSCKKWLE Trigger: CTCCAGCCACTTCTTACAACTCTTAACACTGTGCCAGAAGCAACTCCTAGGGTAAGCTGCCCCCAGAGTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| 3UTR CCA 72 bp | ATTATTTGTGGGAGTGGGAGAGGGGCTCCTGTGCCATaGTGTGGAGGTCAGAGGACAACTCTGTATACTTGG | + |
|
Preference number: 3 (lower is better) Translates to: IICGSGRGAPVP*CGGQRTTLYTW Trigger: CCAAGTATACAGAGTTGTCCTCTGACCTCCACACCATGGCACAGGAGCCCCTCTCCCACTCCCACAAATAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| 3UTR-3UTR CAA 90 bp | GGGTTCTGGGGACCAAGCTCGGGCCCTTGCACTTGTGTGGCAAGCACTTTCACCACTAAAAAGTCATCCTaGACCACACAGCAAGTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: GFWGPSSGPCTCVASTFTTKKSS*TTQQVQ Trigger: TTGAACTTGCTGTGTGGTCAAGGATGACTTTTTAGT...GGTGAAAGTGCTTGCCACACAAGTGCAAGGGCCCGAGCTTGGTCCCCAGAACCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| 3UTR GCA 72 bp | CATCCTACCACTCTGGGGGCAGCTTACCCTAGGAGTTaGTTCTGGCACAGTGTTAAGAGTTGTAAGAAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: HPTTLGAAYPRS*FWHSVKSCKKW Trigger: CCACTTCTTACAACTCTTAACACTGTGCCAGAAGCAACTCCTAGGGTAAGCTGCCCCCAGAGTGGTAGGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| 3UTR GCA 72 bp | TCCCTACTTCCCCTCTTAAGACTCTTAAGTCCCATCTaGGCGTCCCAGTGCCCACTGCTCTTTCAAGAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: SLLPLLRLLSPI*ASQCPLLFQEK Trigger: TTTCTCTTGAAAGAGCAGTGGGCACTGGGACGCGCAGATGGGACTTAAGAGTCTTAAGAGGGGAAGTAGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| 3UTR CCA 72 bp | TACTGTCCTGACACATTTCCCACACACCGTGGAACCTaGCTTTGGGCGTGTATCCATCCGTGTATGTGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: YCPDTFPTHRGT*LWACIHPCMCV Trigger: AACACACATACACGGATGGATACACGCCCAAAGCCAGGTTCCACGGTGTGTGGGAAATGTGTCAGGACAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| 3UTR-3UTR CAA 90 bp | TTAAAAAGGTATTTTAGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTCTGAGGCTCATGACATaGAGGGCAGCAGCCAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LKRYFRAGEMAQWLRALTLRLMT*RAAASR Trigger: CCTGCTGGCTGCTGCCCTCAATGTCATGAGCCTCAG...AGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCTAAAATACCTTTTTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| 3UTR GCA 72 bp | CTCTTAAGACTCTTAAGTCCCATCTGCGCGTCCCAGTaGCCACTGCTCTTTCAAGAGAAAAGAACCACTGGT | + |
|
Preference number: 3 (lower is better) Translates to: LLRLLSPICASQ*PLLFQEKRTTG Trigger: ACCAGTGGTTCTTTTCTCTTGAAAGAGCAGTGGGCACTGGGACGCGCAGATGGGACTTAAGAGTCTTAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| 3UTR CCA 72 bp | GCTTCTGGCACAGTGTTAAGAGTTGTAAGAAGTGGCTaGAGAGATGGCTCAGTGGTTAAGAGTACCGACTGC | + |
|
Preference number: 3 (lower is better) Translates to: ASGTVLRVVRSG*RDGSVVKSTDC Trigger: GCAGTCGGTACTCTTAACCACTGAGCCATCTCTCCAGCCACTTCTTACAACTCTTAACACTGTGCCAGAAGC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| 3UTR CCA 72 bp | TCAAAGAAGTCACAAATAGCCATCATCCTACCACTCTaGGGGCAGCTTACCCTAGGAGTTGCTTCTGGCACA | + |
|
Preference number: 3 (lower is better) Translates to: SKKSQIAIILPL*GQLTLGVASGT Trigger: TGTGCCAGAAGCAACTCCTAGGGTAAGCTGCCCCCAGAGTGGTAGGATGATGGCTATTTGTGACTTCTTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| 3UTR TCA 72 bp | TCCTATGCTTCCCTGTTTCCAGTCTTCTGTCTGTTGTaGAGCAGGTCCCTAAATGCTCTGCAGGGAGTGTAT | + |
|
Preference number: 3 (lower is better) Translates to: SYASLFPVFCLL*SRSLNALQGVY Trigger: ATACACTCCCTGCAGAGCATTTAGGGACCTGCTTCACAACAGACAGAAGACTGGAAACAGGGAAGCATAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| 3UTR TCA 72 bp | CTGGGCTATAAAGAATCCCGTCATTTGTTTGTTTGTTaGCACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LGYKESRHLFVC*HRVSLCSPGCP Trigger: AGGACAGCCAGGGCTACACAGAGAAACCCTGTGTCAACAAACAAACAAATGACGGGATTCTTTATAGCCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| 3UTR TCA 72 bp | AGCCCTTCCTGCCATGATGATAATGGACTGAACCTCTaGACTGTAAGCCAGCCCCAGTTAAATGTTTTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: SPSCHDDNGLNL*TVSQPQLNVFC Trigger: GCAGAAAACATTTAACTGGGGCTGGCTTACAGTTCAGAGGTTCAGTCCATTATCATCATGGCAGGAAGGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| 3UTR TCA 72 bp | AGGTCACCAGCCTTGTATGGTAAGCATTTCACCCACTaGGCAGACCACACATCCAGCTTTTTATATGGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: RSPALYGKHFTH*ADHTSSFLYGF Trigger: GAACCCATATAAAAAGCTGGATGTGTGGTCTGCTCAGTGGGTGAAATGCTTACCATACAAGGCTGGTGACCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| 3UTR CCA 72 bp | TTAAAAAGGTATTTTAGGGCTGGAGAGATGGCTCAGTaGTTAAGAGCACTGACTGCTCTTCTGAAGGTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: LKRYFRAGEMAQ*LRALTALLKVL Trigger: CAGGACCTTCAGAAGAGCAGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCTAAAATACCTTTTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| 3UTR TCA 72 bp | ACTCTGTATACTTGGTCCTCTCCTTCCATCTTTATATaGATTCTAGGGACCAAACTCAGGTCACCAGCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: TLYTWSSPSIFI*ILGTKLRSPAL Trigger: CAAGGCTGGTGACCTGAGTTTGGTCCCTAGAATTCATATAAAGATGGAAGGAGAGGACCAAGTATACAGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| 3UTR CCA 72 bp | TCATCCTTGACCACACAGCAAGTTCAAAGGCTAATCTaGGCTATAAAGAATCCCGTCATTTGTTTGTTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: SSLTTQQVQRLI*AIKNPVICLFV Trigger: AACAAACAAACAAATGACGGGATTCTTTATAGCCCAGATTAGCCTTTGAACTTGCTGTGTGGTCAAGGATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| CDS-3UTR CCA 90 bp | CCACTGAGGCTCATGACATTGAGGGCAGCAGCCAGCAGGGAGCCTTGGAACCTGGGTGGCCCTCTGTGTTaGATCCTAGGGCGGGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: PLRLMTLRAAASREPWNLGGPLC*ILGRDP Trigger: AGGGTCCCGCCCTAGGATCCAACACAGAGGGCCACC...CAGGTTCCAAGGCTCCCTGCTGGCTGCTGCCCTCAATGTCATGAGCCTCAGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| CDS-3UTR CCA 90 bp | GGGTTCTGGGGACCAAGCTCGGGCCCTTGCACTTGTGTGGCAAGCACTTTCACCCACAGACAACAGCGCTaGGAGCCTCAAGCCCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GFWGPSSGPCTCVASTFTHRQQR*EPQALG Trigger: TCCCAGGGCTTGAGGCTCCCAGCGCTGTTGTCTGTG...GGTGAAAGTGCTTGCCACACAAGTGCAAGGGCCCGAGCTTGGTCCCCAGAACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| CDS-3UTR CCA 90 bp | GCATCCCTACTTCCCCTCTTAAGACTCTTAAGTCCCATCTGCGCGTCCCAGTGCCACAGACAACAGCGCTaGGAGCCTCAAGCCCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ASLLPLLRLLSPICASQCHRQQR*EPQALG Trigger: TCCCAGGGCTTGAGGCTCCCAGCGCTGTTGTCTGTG...GCACTGGGACGCGCAGATGGGACTTAAGAGTCTTAAGAGGGGAAGTAGGGATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| 3UTR CAA 72 bp | ATATGGGTTCTGGGGACCAAGCTCGGGCCCTTGCACTaGTGTGGCAAGCACTTTCACCCACTGAGCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: IWVLGTKLGPLH*CGKHFHPLSLL Trigger: GAGGAGGCTCAGTGGGTGAAAGTGCTTGCCACACAAGTGCAAGGGCCCGAGCTTGGTCCCCAGAACCCATAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| CDS-3UTR TCA 90 bp | GCCACAGCATCCCTACTTCCCCTCTTAAGACTCTTAAGTCCCATCTGCGCGTCCCTGCATCCTCCAGGGTaGGGCTCTCATAGGTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: ATASLLPLLRLLSPICASLHPPG*GSHRSL Trigger: CAGTGACCTATGAGAGCCTCACCCTGGAGGATGCAG...GGACGCGCAGATGGGACTTAAGAGTCTTAAGAGGGGAAGTAGGGATGCTGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| CDS-3UTR TCA 90 bp | CGGGCCCTTGCACTTGTGTGGCAAGCACTTTCACCCACTGAGCCTCCTCTCCAGACTCCTAGCTTCTTCTaGGCTGCTGGTCTTGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: RALALVWQALSPTEPPLQTPSFF*AAGLDN Trigger: ATTGTCAAGACCAGCAGCTCAGAAGAAGCTAGGAGT...CTGGAGAGGAGGCTCAGTGGGTGAAAGTGCTTGCCACACAAGTGCAAGGGCCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| CDS-3UTR TCA 90 bp | GGGCGTAGCCCTCTATTTTTGGCCACAGCATCCCTACTTCCCCTCTTAAGACTCCTGCATCCTCCAGGGTaGGGCTCTCATAGGTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: GRSPLFLATASLLPLLRLLHPPG*GSHRSL Trigger: CAGTGACCTATGAGAGCCTCACCCTGGAGGATGCAG...GAGTCTTAAGAGGGGAAGTAGGGATGCTGTGGCCAAAAATAGAGGGCTACGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| CDS-3UTR GCA 90 bp | GACTCACACTGGGAAGCAGGGCTCCCCTTTCCCTACCCATCCCTCCTAGTTGGCCTCAGAGACCACGTGTaGAGCTGCAAATTCACATAC | + |
|
Preference number: 4 (lower is better) Translates to: DSHWEAGLPFPYPSLLVGLRDHV*SCKFTY Trigger: GTATGTGAATTTGCAGCTGCACACGTGGTCTCTGAG...GCCAACTAGGAGGGATGGGTAGGGAAAGGGGAGCCCTGCTTCCCAGTGTGAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| CDS-3UTR CCA 90 bp | CCTACCACTCTGGGGGCAGCTTACCCTAGGAGTTGCTTCTGGCACAGTGTTAAGGCCTGTCTGAGGTTCTaGGACAGCTCTGGATGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: PTTLGAAYPRSCFWHSVKACLRF*DSSGCL Trigger: TAGGCATCCAGAGCTGTCCCAGAACCTCAGACAGGC...CTTAACACTGTGCCAGAAGCAACTCCTAGGGTAAGCTGCCCCCAGAGTGGTAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| CDS-3UTR CCA 90 bp | CCACTGAGGCTCATGACATTGAGGGCAGCAGCCAGCAGGGAGCCTTGGAACCTGCAGAGAGTCCTTTTCTaGGCTTCTGGATCTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: PLRLMTLRAAASREPWNLQRVLF*ASGSHC Trigger: ACAGTGAGATCCAGAAGCCCAGAAAAGGACTCTCTG...CAGGTTCCAAGGCTCCCTGCTGGCTGCTGCCCTCAATGTCATGAGCCTCAGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| CDS-3UTR CCA 90 bp | GTTCTATACGAACCATGTCAATTCCCAGAGCCCCAAAAGAGCAGCATCGATGTCGGTGGCCCTCTGTGTTaGATCCTAGGGCGGGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: VLYEPCQFPEPQKSSIDVGGPLC*ILGRDP Trigger: AGGGTCCCGCCCTAGGATCCAACACAGAGGGCCACC...GACATCGATGCTGCTCTTTTGGGGCTCTGGGAATTGACATGGTTCGTATAGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| CDS-3UTR TCA 90 bp | CTCTTTCAAGAGAAAAGAACCACTGGTGGGTTTGGGGTTATGGCCTGGGACAGAGCTCAGAAGCCTGTCTaGGGTTCTGGGACAGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LFQEKRTTGGFGVMAWDRAQKPV*GSGTAL Trigger: CAGAGCTGTCCCAGAACCTCAGACAGGCTTCTGAGC...TCTGTCCCAGGCCATAACCCCAAACCCACCAGTGGTTCTTTTCTCTTGAAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| CDS-3UTR GCA 90 bp | GCCACAGCATCCCTACTTCCCCTCTTAAGACTCTTAAGTCCCATCTGCGCGTCCGACCACGTGTGCAGCTaGAAATTCACATACTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ATASLLPLLRLLSPICASDHVCS*KFTYWH Trigger: GTGCCAGTATGTGAATTTGCAGCTGCACACGTGGTC...GGACGCGCAGATGGGACTTAAGAGTCTTAAGAGGGGAAGTAGGGATGCTGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| CDS-3UTR CCA 90 bp | GCCACAGCATCCCTACTTCCCCTCTTAAGACTCTTAAGTCCCATCTGCGCGTCCAAAGGTGAGGTTGTCTaGATGGTCCCTGATGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ATASLLPLLRLLSPICASKGEVV*MVPDGH Trigger: GTGACCATCAGGGACCATCCAGACAACCTCACCTTT...GGACGCGCAGATGGGACTTAAGAGTCTTAAGAGGGGAAGTAGGGATGCTGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| CDS-3UTR CCA 90 bp | CCGAAGGTCCTGAGTTCAAAGCCCAGCAACCACATGGTGGCTCACAACCATCCGCAGAGAGTCCTTTTCTaGGCTTCTGGATCTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: PKVLSSKPSNHMVAHNHPQRVLF*ASGSHC Trigger: ACAGTGAGATCCAGAAGCCCAGAAAAGGACTCTCTG...CGGATGGTTGTGAGCCACCATGTGGTTGCTGGGCTTTGAACTCAGGACCTTCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| 3UTR CAA 72 bp | TGTGTCCGAGCTGTTCATGGGCGTAGCCCTCTATTTTaGGCCACAGCATCCCTACTTCCCCTCTTAAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: CVRAVHGRSPLF*ATASLLPLLRL Trigger: GAGTCTTAAGAGGGGAAGTAGGGATGCTGTGGCCAAAAATAGAGGGCTACGCCCATGAACAGCTCGGACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| CDS-3UTR TCA 90 bp | CCACTGAGGCTCATGACATTGAGGGCAGCAGCCAGCAGGGAGCCTTGGAACCTGCTGAGCTGCTGGTCTTaGCAATATCTTTACATAGTA | + |
|
Preference number: 4 (lower is better) Translates to: PLRLMTLRAAASREPWNLLSCWS*QYLYIV Trigger: TACTATGTAAAGATATTGTCAAGACCAGCAGCTCAG...CAGGTTCCAAGGCTCCCTGCTGGCTGCTGCCCTCAATGTCATGAGCCTCAGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| CDS-3UTR TCA 90 bp | GTTCTATACGAACCATGTCAATTCCCAGAGCCCCAAAAGAGCAGCATCGATGTCGCTCAGAAGCCTGTCTaGGGTTCTGGGACAGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VLYEPCQFPEPQKSSIDVAQKPV*GSGTAL Trigger: CAGAGCTGTCCCAGAACCTCAGACAGGCTTCTGAGC...GACATCGATGCTGCTCTTTTGGGGCTCTGGGAATTGACATGGTTCGTATAGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| CDS-3UTR CCA 90 bp | CCTACCACTCTGGGGGCAGCTTACCCTAGGAGTTGCTTCTGGCACAGTGTTAAGTCCTGGGTCCTCACTTaGAACCACAGACAACTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: PTTLGAAYPRSCFWHSVKSWVLT*NHRQLN Trigger: ATTGAGTTGTCTGTGGTTCCAAGTGAGGACCCAGGA...CTTAACACTGTGCCAGAAGCAACTCCTAGGGTAAGCTGCCCCCAGAGTGGTAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045151.6 |
||
| CDS-3UTR CCA 90 bp | CGGGCCCTTGCACTTGTGTGGCAAGCACTTTCACCCACTGAGCCTCCTCTCCAGTGCAAATTCACATACTaGCACTCATTCTGCTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RALALVWQALSPTEPPLQCKFTY*HSFCSE Trigger: TTCTGAGCAGAATGAGTGCCAGTATGTGAATTTGCA...CTGGAGAGGAGGCTCAGTGGGTGAAAGTGCTTGCCACACAAGTGCAAGGGCCCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| CDS-3UTR TCA 90 bp | CTCTTTCAAGAGAAAAGAACCACTGGTGGGTTTGGGGTTATGGCCTGGGACAGATTCACCTACACTTCCTaGCATGGTGCTGGGACCATG | + |
|
Preference number: 4 (lower is better) Translates to: LFQEKRTTGGFGVMAWDRFTYTS*HGAGTM Trigger: CATGGTCCCAGCACCATGTCAGGAAGTGTAGGTGAA...TCTGTCCCAGGCCATAACCCCAAACCCACCAGTGGTTCTTTTCTCTTGAAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| 3UTR CAA 72 bp | ATCAAGAACAGCAGTTGGTATGTCCTTCCCAACCCCTaGAACCCCAAAGGCTCCTCTGACTTCAAAGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: IKNSSWYVLPNP*NPKGSSDFKAG Trigger: CCCAGCTTTGAAGTCAGAGGAGCCTTTGGGGTTCAAGGGGTTGGGAAGGACATACCAACTGCTGTTCTTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| CDS-3UTR CCA 90 bp | GTTCTATACGAACCATGTCAATTCCCAGAGCCCCAAAAGAGCAGCATCGATGTCCTACACTTCCTGACATaGTGCTGGGACCATGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VLYEPCQFPEPQKSSIDVLHFLT*CWDHAE Trigger: CTCTGCATGGTCCCAGCACCATGTCAGGAAGTGTAG...GACATCGATGCTGCTCTTTTGGGGCTCTGGGAATTGACATGGTTCGTATAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| CDS-3UTR CCA 90 bp | CTCTTTCAAGAGAAAAGAACCACTGGTGGGTTTGGGGTTATGGCCTGGGACAGAAAAGGTGAGGTTGTCTaGATGGTCCCTGATGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LFQEKRTTGGFGVMAWDRKGEVV*MVPDGH Trigger: GTGACCATCAGGGACCATCCAGACAACCTCACCTTT...TCTGTCCCAGGCCATAACCCCAAACCCACCAGTGGTTCTTTTCTCTTGAAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| CDS-3UTR CCA 90 bp | GGGCGTAGCCCTCTATTTTTGGCCACAGCATCCCTACTTCCCCTCTTAAGACTCAACTGGGTCCTCACTTaGAACCACAGACAACTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: GRSPLFLATASLLPLLRLNWVLT*NHRQLN Trigger: ATTGAGTTGTCTGTGGTTCCAAGTGAGGACCCAGTT...GAGTCTTAAGAGGGGAAGTAGGGATGCTGTGGCCAAAAATAGAGGGCTACGCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106582.9 |
||
| CDS-3UTR TCA 90 bp | CATCCTACCACTCTGGGGGCAGCTTACCCTAGGAGTTGCTTCTGGCACAGTGTTCTGAGCTGCTGGTCTTaGCAATATCTTTACATAGTA | + |
|
Preference number: 4 (lower is better) Translates to: HPTTLGAAYPRSCFWHSVLSCWS*QYLYIV Trigger: TACTATGTAAAGATATTGTCAAGACCAGCAGCTCAG...AACACTGTGCCAGAAGCAACTCCTAGGGTAAGCTGCCCCCAGAGTGGTAGGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| CDS-3UTR GCA 90 bp | AACACAAGTACCGTTCTATACGAACCATGTCAATTCCCAGAGCCCCAAAAGAGCGACCACGTGTGCAGCTaGAAATTCACATACTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: NTSTVLYEPCQFPEPQKSDHVCS*KFTYWH Trigger: GTGCCAGTATGTGAATTTGCAGCTGCACACGTGGTC...GCTCTTTTGGGGCTCTGGGAATTGACATGGTTCGTATAGAACGGTACTTGTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| CDS-3UTR CCA 90 bp | TTAAAAAGGTATTTTAGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCCTGTCTGAGGTTCTaGGACAGCTCTGGATGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: LKRYFRAGEMAQWLRALTACLRF*DSSGCL Trigger: TAGGCATCCAGAGCTGTCCCAGAACCTCAGACAGGC...AGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCTAAAATACCTTTTTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
||
| CDS-3UTR CCA 90 bp | TGTACCCATAGTCCCTACTGTCCTGACACATTTCCCACACACCGTGGAACCTGGTGCAAATTCACATACTaGCACTCATTCTGCTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: CTHSPYCPDTFPTHRGTWCKFTY*HSFCSE Trigger: TTCTGAGCAGAATGAGTGCCAGTATGTGAATTTGCA...CCAGGTTCCACGGTGTGTGGGAAATGTGTCAGGACAGTAGGGACTATGGGTACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| CDS-3UTR CCA 90 bp | GTTCTATACGAACCATGTCAATTCCCAGAGCCCCAAAAGAGCAGCATCGATGTCCCTTTTCTGGGCTTCTaGATCTCACTGTACTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VLYEPCQFPEPQKSSIDVPFLGF*ISLYSA Trigger: AGCAGAGTACAGTGAGATCCAGAAGCCCAGAAAAGG...GACATCGATGCTGCTCTTTTGGGGCTCTGGGAATTGACATGGTTCGTATAGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| CDS-3UTR CCA 90 bp | TTAAAAAGGTATTTTAGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTCTACACTTCCTGACATaGTGCTGGGACCATGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LKRYFRAGEMAQWLRALTLHFLT*CWDHAE Trigger: CTCTGCATGGTCCCAGCACCATGTCAGGAAGTGTAG...AGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCTAAAATACCTTTTTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| CDS-3UTR CCA 90 bp | AACACAAGTACCGTTCTATACGAACCATGTCAATTCCCAGAGCCCCAAAAGAGCCCTTTTCTGGGCTTCTaGATCTCACTGTACTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: NTSTVLYEPCQFPEPQKSPFLGF*ISLYSA Trigger: AGCAGAGTACAGTGAGATCCAGAAGCCCAGAAAAGG...GCTCTTTTGGGGCTCTGGGAATTGACATGGTTCGTATAGAACGGTACTTGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| CDS-3UTR TCA 90 bp | ATCTGGGCTATAAAGAATCCCGTCATTTGTTTGTTTGTTGACACAGGGTTTCTCTTCACCTACACTTCCTaGCATGGTGCTGGGACCATG | + |
|
Preference number: 4 (lower is better) Translates to: IWAIKNPVICLFVDTGFLFTYTS*HGAGTM Trigger: CATGGTCCCAGCACCATGTCAGGAAGTGTAGGTGAA...GAGAAACCCTGTGTCAACAAACAAACAAATGACGGGATTCTTTATAGCCCAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR CAA 72 bp | GCCATGGTGTGGAGGTCAGAGGACAACTCTGTATACTaGGTCCTCTCCTTCCATCTTTATATGAATTCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: AMVWRSEDNSVY*VLSFHLYMNSR Trigger: CCTAGAATTCATATAAAGATGGAAGGAGAGGACCAAGTATACAGAGTTGTCCTCTGACCTCCACACCATGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| CDS-3UTR GCA 90 bp | TTAAAAAGGTATTTTAGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTCTCAGAGACCACGTGTaGAGCTGCAAATTCACATAC | + |
|
Preference number: 4 (lower is better) Translates to: LKRYFRAGEMAQWLRALTLRDHV*SCKFTY Trigger: GTATGTGAATTTGCAGCTGCACACGTGGTCTCTGAG...AGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCTAAAATACCTTTTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| 3UTR CAA 72 bp | CTTCACGGCAATAAAACATTAACTAAAAAGTCATCCTaGACCACACAGCAAGTTCAAAGGCTAATCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LHGNKTLTKKSS*TTQQVQRLIWA Trigger: AGCCCAGATTAGCCTTTGAACTTGCTGTGTGGTCAAGGATGACTTTTTAGTTAATGTTTTATTGCCGTGAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| CDS-3UTR CAA 90 bp | GCATCCCTACTTCCCCTCTTAAGACTCTTAAGTCCCATCTGCGCGTCCCAGTGCCGGTGGCCCTCTGTGTaGGATCCTAGGGCGGGACCC | + |
|
Preference number: 5 (lower is better) Translates to: ASLLPLLRLLSPICASQCRWPSV*DPRAGP Trigger: GGGTCCCGCCCTAGGATCCAACACAGAGGGCCACCG...GCACTGGGACGCGCAGATGGGACTTAAGAGTCTTAAGAGGGGAAGTAGGGATGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| CDS-3UTR CAA 90 bp | TGTACCCATAGTCCCTACTGTCCTGACACATTTCCCACACACCGTGGAACCTGGCGGTGGCCCTCTGTGTaGGATCCTAGGGCGGGACCC | + |
|
Preference number: 5 (lower is better) Translates to: CTHSPYCPDTFPTHRGTWRWPSV*DPRAGP Trigger: GGGTCCCGCCCTAGGATCCAACACAGAGGGCCACCG...CCAGGTTCCACGGTGTGTGGGAAATGTGTCAGGACAGTAGGGACTATGGGTACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| CDS CCA 90 bp | TTCTGGGACAGCTCTGGATGCCTATCAGCTTTGACCAGCCGCTTCTaGAACATCCTCCAGGCCAGCAGAGAGGTCCCCACCAACAGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: FWDSSGCLSALTSRF*NILQASREVPTNRN Trigger: GTTTCTGTTGGTGGGGACCTCTCTGCTGGCCTGGAGGATGTTCCAGAAGCGGCTGGTCAAAGCTGATAGGCATCCAGAGCTGTCCCAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| CDS-3UTR CAA 90 bp | GGGTTCTGGGGACCAAGCTCGGGCCCTTGCACTTGTGTGGCAAGCACTTTCACCACTGTAAAGGTGAGGTaGTCTGGATGGTCCCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: GFWGPSSGPCTCVASTFTTVKVR*SGWSLM Trigger: CATCAGGGACCATCCAGACAACCTCACCTTTACAGT...GGTGAAAGTGCTTGCCACACAAGTGCAAGGGCCCGAGCTTGGTCCCCAGAACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| CDS CCA 90 bp | GCACTCATTCTGCTCAGAAGCCTGTCTGAGGTTCTGGGACAGCTCTaGATGCCTATCAGCTTTGACCAGCCGCTTCTGGAACATCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: ALILLRSLSEVLGQL*MPISFDQPLLEHPP Trigger: TGGAGGATGTTCCAGAAGCGGCTGGTCAAAGCTGATAGGCATCCAGAGCTGTCCCAGAACCTCAGACAGGCTTCTGAGCAGAATGAGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| CDS CCA 90 bp | GGCTCTTCCCTCAGAGACCACGTGTGCAGCTGCAAATTCACATACTaGCACTCATTCTGCTCAGAAGCCTGTCTGAGGTTCTGGGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: GSSLRDHVCSCKFTY*HSFCSEACLRFWDS Trigger: GCTGTCCCAGAACCTCAGACAGGCTTCTGAGCAGAATGAGTGCCAGTATGTGAATTTGCAGCTGCACACGTGGTCTCTGAGGGAAGAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| CDS-3UTR CAA 90 bp | CCTACCACTCTGGGGGCAGCTTACCCTAGGAGTTGCTTCTGGCACAGTGTTAAGGTCCTGGGTCCTCACTaGGAACCACAGACAACTCAA | + |
|
Preference number: 5 (lower is better) Translates to: PTTLGAAYPRSCFWHSVKVLGPH*EPQTTQ Trigger: TTGAGTTGTCTGTGGTTCCAAGTGAGGACCCAGGAC...CTTAACACTGTGCCAGAAGCAACTCCTAGGGTAAGCTGCCCCCAGAGTGGTAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045151.6 |
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| CDS-3UTR CAA 90 bp | ATGAAAACTGCCTCTGACTGGGCACTTGGGCCACCCACAATGAGTGACTCACACCAGGTGTCTCTAGTGTaGGTCCTGGGTCCTCACTTG | + |
|
Preference number: 5 (lower is better) Translates to: MKTASDWALGPPTMSDSHQVSLV*VLGPHL Trigger: CAAGTGAGGACCCAGGACCAACACTAGAGACACCTG...GTGTGAGTCACTCATTGTGGGTGGCCCAAGTGCCCAGTCAGAGGCAGTTTTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045151.6 |
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| CDS CCA 90 bp | TTCACATACTGGCACTCATTCTGCTCAGAAGCCTGTCTGAGGTTCTaGGACAGCTCTGGATGCCTATCAGCTTTGACCAGCCGCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: FTYWHSFCSEACLRF*DSSGCLSALTSRFW Trigger: CCAGAAGCGGCTGGTCAAAGCTGATAGGCATCCAGAGCTGTCCCAGAACCTCAGACAGGCTTCTGAGCAGAATGAGTGCCAGTATGTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| CDS-3UTR CAA 90 bp | CCTACCACTCTGGGGGCAGCTTACCCTAGGAGTTGCTTCTGGCACAGTGTTAAGAAACTGGGTCCTCACTaGGAACCACAGACAACTCAA | + |
|
Preference number: 5 (lower is better) Translates to: PTTLGAAYPRSCFWHSVKKLGPH*EPQTTQ Trigger: TTGAGTTGTCTGTGGTTCCAAGTGAGGACCCAGTTT...CTTAACACTGTGCCAGAAGCAACTCCTAGGGTAAGCTGCCCCCAGAGTGGTAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106582.9 |
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| CDS-3UTR CAA 90 bp | GCATCCCTACTTCCCCTCTTAAGACTCTTAAGTCCCATCTGCGCGTCCCAGTGCACAGACAACTCAATCTaGAAGTACTTATCGAACCCC | + |
|
Preference number: 5 (lower is better) Translates to: ASLLPLLRLLSPICASQCTDNSI*KYLSNP Trigger: GGGGTTCGATAAGTACTTCAAGATTGAGTTGTCTGT...GCACTGGGACGCGCAGATGGGACTTAAGAGTCTTAAGAGGGGAAGTAGGGATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| CDS-3UTR CAA 90 bp | GCCACAGCATCCCTACTTCCCCTCTTAAGACTCTTAAGTCCCATCTGCGCGTCCTTTCTGGTCCTGAGGTaGATGAAGAGAATCTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: ATASLLPLLRLLSPICASFLVLR*MKRISI Trigger: AATGGAGATTCTCTTCATCAACCTCAGGACCAGAAA...GGACGCGCAGATGGGACTTAAGAGTCTTAAGAGGGGAAGTAGGGATGCTGTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| CDS-3UTR CAA 90 bp | GTTCTATACGAACCATGTCAATTCCCAGAGCCCCAAAAGAGCAGCATCGATGTCTTTCTGGTCCTGAGGTaGATGAAGAGAATCTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: VLYEPCQFPEPQKSSIDVFLVLR*MKRISI Trigger: AATGGAGATTCTCTTCATCAACCTCAGGACCAGAAA...GACATCGATGCTGCTCTTTTGGGGCTCTGGGAATTGACATGGTTCGTATAGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| CDS-3UTR CAA 90 bp | TTAAAAAGGTATTTTAGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTCAGGTGTCTCTAGTGTaGGTCCTGGAGATGAAACTG | + |
|
Preference number: 5 (lower is better) Translates to: LKRYFRAGEMAQWLRALTQVSLV*VLEMKL Trigger: CAGTTTCATCTCCAGGACCAACACTAGAGACACCTG...AGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCTAAAATACCTTTTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106582.9 |
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| CDS-3UTR CAA 90 bp | ATCTGGGCTATAAAGAATCCCGTCATTTGTTTGTTTGTTGACACAGGGTTTCTCACTGTAAAGGTGAGGTaGTCTGGATGGTCCCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: IWAIKNPVICLFVDTGFLTVKVR*SGWSLM Trigger: CATCAGGGACCATCCAGACAACCTCACCTTTACAGT...GAGAAACCCTGTGTCAACAAACAAACAAATGACGGGATTCTTTATAGCCCAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| CDS CAA 72 bp | CTGAGGTTCTGGGACAGCTCTGGATGCCTATCAGCTTaGACCAGCCGCTTCTGGAACATCCTCCAGGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LRFWDSSGCLSA*TSRFWNILQAS Trigger: GCTGGCCTGGAGGATGTTCCAGAAGCGGCTGGTCAAAGCTGATAGGCATCCAGAGCTGTCCCAGAACCTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| CDS CCA 72 bp | CACTCAGGGATTCACCTACACTTCCTGACATGGTGCTaGGACCATGCAGAGGGACACAGCCTGGAAGCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: HSGIHLHFLTWC*DHAEGHSLEAK Trigger: TTTGGCTTCCAGGCTGTGTCCCTCTGCATGGTCCCAGCACCATGTCAGGAAGTGTAGGTGAATCCCTGAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| CDS GCA 72 bp | TCAGAAGCCTGTCTGAGGTTCTGGGACAGCTCTGGATaGCTATCAGCTTTGACCAGCCGCTTCTGGAACATC | + |
|
Preference number: 6 (lower is better) Translates to: SEACLRFWDSSG*LSALTSRFWNI Trigger: GATGTTCCAGAAGCGGCTGGTCAAAGCTGATAGGCATCCAGAGCTGTCCCAGAACCTCAGACAGGCTTCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| CDS GCA 72 bp | CTTGGTAGCACCGGCTCTTCCCTCAGAGACCACGTGTaGAGCTGCAAATTCACATACTGGCACTCATTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LGSTGSSLRDHV*SCKFTYWHSFC Trigger: GCAGAATGAGTGCCAGTATGTGAATTTGCAGCTGCACACGTGGTCTCTGAGGGAAGAGCCGGTGCTACCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| CDS CAA 90 bp | TCTGGGCTTCTGGATCTCACTGTACTCTGCTTTCTGGTCCTGAGGTaGATGAAGAGAATCTCCATTGGCGTGAGAATCCTGCCTCTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: SGLLDLTVLCFLVLR*MKRISIGVRILPLG Trigger: TCCCAGAGGCAGGATTCTCACGCCAATGGAGATTCTCTTCATCAACCTCAGGACCAGAAAGCAGAGTACAGTGAGATCCAGAAGCCCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| CDS TCA 72 bp | GGTAATGCCAATGTGCTATATTCCACCACTTCTACCTaGCTTGGTAGCACCGGCTCTTCCCTCAGAGACCAC | + |
|
Preference number: 6 (lower is better) Translates to: GNANVLYSTTST*LGSTGSSLRDH Trigger: GTGGTCTCTGAGGGAAGAGCCGGTGCTACCAAGTCAGGTAGAAGTGGTGGAATATAGCACATTGGCATTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| CDS GCA 72 bp | GTGTGCAGCTGCAAATTCACATACTGGCACTCATTCTaGTCAGAAGCCTGTCTGAGGTTCTGGGACAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: VCSCKFTYWHSF*SEACLRFWDSS Trigger: AGAGCTGTCCCAGAACCTCAGACAGGCTTCTGAGCAGAATGAGTGCCAGTATGTGAATTTGCAGCTGCACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| CDS CCA 72 bp | CTCAGAGACCACGTGTGCAGCTGCAAATTCACATACTaGCACTCATTCTGCTCAGAAGCCTGTCTGAGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LRDHVCSCKFTY*HSFCSEACLRF Trigger: GAACCTCAGACAGGCTTCTGAGCAGAATGAGTGCCAGTATGTGAATTTGCAGCTGCACACGTGGTCTCTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| CDS CAA 72 bp | ATGCCAATGTGCTATATTCCACCACTTCTACCTGACTaGGTAGCACCGGCTCTTCCCTCAGAGACCACGTGT | + |
|
Preference number: 6 (lower is better) Translates to: MPMCYIPPLLPD*VAPALPSETTC Trigger: ACACGTGGTCTCTGAGGGAAGAGCCGGTGCTACCAAGTCAGGTAGAAGTGGTGGAATATAGCACATTGGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| CDS CAA 90 bp | CTGATGGTCACTCGGCCACTCCTAGCTTCTTCTGAGCTGCTGGTCTaGACAATATCTTTACATAGTATCTTAAGTGACACTCTGCACCAG | + |
|
Preference number: 6 (lower is better) Translates to: LMVTRPLLASSELLV*TISLHSILSDTLHQ Trigger: CTGGTGCAGAGTGTCACTTAAGATACTATGTAAAGATATTGTCAAGACCAGCAGCTCAGAAGAAGCTAGGAGTGGCCGAGTGACCATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| CDS CAA 72 bp | CCTGGGTCCTCACTTGGAACCACAGACAACTCAATCTaGAAGTACTTATCGAACCCCAAGGAGCCATCAAAA | + |
|
Preference number: 6 (lower is better) Translates to: PGSSLGTTDNSI*KYLSNPKEPSK Trigger: TTTTGATGGCTCCTTGGGGTTCGATAAGTACTTCAAGATTGAGTTGTCTGTGGTTCCAAGTGAGGACCCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045151.6 |
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| CDS GCA 72 bp | ATGAATAGTGAAGCTCTTCCTGGGGTAATGCCAATGTaGTATATTCCACCACTTCTACCTGACTTGGTAGCA | + |
|
Preference number: 6 (lower is better) Translates to: MNSEALPGVMPM*YIPPLLPDLVA Trigger: TGCTACCAAGTCAGGTAGAAGTGGTGGAATATAGCACATTGGCATTACCCCAGGAAGAGCTTCACTATTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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| CDS CAA 72 bp | ACTCGGCCACTCCTAGCTTCTTCTGAGCTGCTGGTCTaGACAATATCTTTACATAGTATCTTAAGTGACACT | + |
|
Preference number: 6 (lower is better) Translates to: TRPLLASSELLV*TISLHSILSDT Trigger: AGTGTCACTTAAGATACTATGTAAAGATATTGTCAAGACCAGCAGCTCAGAAGAAGCTAGGAGTGGCCGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045151.6 ENSMUST00000106582.9 |
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