Pregenerated sensors for CD2AP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061665Ensembl transcript IDs: ENSMUST00000024709.9, ENSMUST00000233476.2
Found 145 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACATGTGCTCCTGGGGCTGAGATCGCCTGTCAGGTTGTGACACAGTaGGTCAGGAAGGAGCCAAACTGCAAAGGAAAACTTAGTATACAA | + |
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Preference number: 1 (lower is better) Translates to: TCAPGAEIACQVVTQ*VRKEPNCKGKLSIQ Trigger: TTGTATACTAAGTTTTCCTTTGCAGTTTGGCTCCTTCCTGACCCACTGTGTCACAACCTGACAGGCGATCTCAGCCCCAGGAGCACATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
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| 3UTR TCA 90 bp | ATTAAACTACATGTGCTCCTGGGGCTGAGATCGCCTGTCAGGTTGTaGCACAGTGGGTCAGGAAGGAGCCAAACTGCAAAGGAAAACTTA | + |
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Preference number: 1 (lower is better) Translates to: IKLHVLLGLRSPVRL*HSGSGRSQTAKENL Trigger: TAAGTTTTCCTTTGCAGTTTGGCTCCTTCCTGACCCACTGTGTCACAACCTGACAGGCGATCTCAGCCCCAGGAGCACATGTAGTTTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
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| 3UTR CCA 90 bp | TGTGGATATAGGGCCCCTATACAGCACAGGCTGGCCTCAAACTCATaGTTTCTCTCCCCAAATCTCCAAGTTACAGGCATGTCATCACTA | + |
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Preference number: 1 (lower is better) Translates to: CGYRAPIQHRLASNS*FLSPNLQVTGMSSL Trigger: TAGTGATGACATGCCTGTAACTTGGAGATTTGGGGAGAGAAACCATGAGTTTGAGGCCAGCCTGTGCTGTATAGGGGCCCTATATCCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
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| 3UTR CCA 90 bp | GCTGTTTCCTTTCTTGTGGATATAGGGCCCCTATACAGCACAGGCTaGCCTCAAACTCATGGTTTCTCTCCCCAAATCTCCAAGTTACAG | + |
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Preference number: 1 (lower is better) Translates to: AVSFLVDIGPLYSTG*PQTHGFSPQISKLQ Trigger: CTGTAACTTGGAGATTTGGGGAGAGAAACCATGAGTTTGAGGCCAGCCTGTGCTGTATAGGGGCCCTATATCCACAAGAAAGGAAACAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
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| 3UTR CCA 90 bp | GTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTaGTGTAGTGTATGTATACAAGTTCATGCCCTATGCAGTACAGGA | + |
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Preference number: 1 (lower is better) Translates to: VSVCVCVCVCVCVCV*CSVCIQVHALCSTG Trigger: TCCTGTACTGCATAGGGCATGAACTTGTATACATACACTACACCACACACACACACACACACACACACACACACACACACACACAGACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
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| 3UTR TCA 90 bp | AGTGTATGTATACAAGTTCATGCCCTATGCAGTACAGGAAAGCAGTaGCTCTACTATAAAGCTAACCCGTCCTTCTCAAATAGTTTATCT | + |
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Preference number: 1 (lower is better) Translates to: SVCIQVHALCSTGKQ*LYYKANPSFSNSLS Trigger: AGATAAACTATTTGAGAAGGACGGGTTAGCTTTATAGTAGAGTCACTGCTTTCCTGTACTGCATAGGGCATGAACTTGTATACATACACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
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| 3UTR-3UTR TCA 90 bp | CAAAGGAACGCTGTTTCCTTTCTTGTGGATATAGGGCCCCTATACAGCACAGGCATGTGCTCCTGGGGCTaGGATCGCCTGTCAGGTTGT | + |
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Preference number: 2 (lower is better) Translates to: QRNAVSFLVDIGPLYSTGMCSWG*DRLSGC Trigger: ACAACCTGACAGGCGATCTCAGCCCCAGGAGCACAT...GCCTGTGCTGTATAGGGGCCCTATATCCACAAGAAAGGAAACAGCGTTCCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
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| 3UTR-3UTR CCA 90 bp | CCCCTATACAGCACAGGCTGGCCTCAAACTCATGGTTTCTCTCCCCAAATCTCCAGACAAACCTCCCTTTaGGAATGCAGGAGATCATTT | + |
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Preference number: 2 (lower is better) Translates to: PLYSTGWPQTHGFSPQISRQTSL*ECRRSF Trigger: AAATGATCTCCTGCATTCCCAAAGGGAGGTTTGTCT...GGAGATTTGGGGAGAGAAACCATGAGTTTGAGGCCAGCCTGTGCTGTATAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
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| 3UTR-3UTR GCA 90 bp | CCCCTATACAGCACAGGCTGGCCTCAAACTCATGGTTTCTCTCCCCAAATCTCCATGTATACAAGTTCATaGCCTATGCAGTACAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: PLYSTGWPQTHGFSPQISMYTSS*PMQYRK Trigger: TTTCCTGTACTGCATAGGGCATGAACTTGTATACAT...GGAGATTTGGGGAGAGAAACCATGAGTTTGAGGCCAGCCTGTGCTGTATAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
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| 3UTR CAA 90 bp | GCACTTGGGAGGCAGAGGCAGGGAAACCGGAAGTTTAAGACAATTTaGCTATATCACAAGGTTAAGTCCAGCCTGGGATATATAAGTTCC | + |
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Preference number: 2 (lower is better) Translates to: ALGRQRQGNRKFKTI*LYHKVKSSLGYISS Trigger: GGAACTTATATATCCCAGGCTGGACTTAACCTTGTGATATAGCAAAATTGTCTTAAACTTCCGGTTTCCCTGCCTCTGCCTCCCAAGTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
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| 3UTR-3UTR CCA 90 bp | CAAAGGAACGCTGTTTCCTTTCTTGTGGATATAGGGCCCCTATACAGCACAGGCGCTCAACATCCATTGTaGAATGATCTTCAATATGGT | + |
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Preference number: 2 (lower is better) Translates to: QRNAVSFLVDIGPLYSTGAQHPL*NDLQYG Trigger: ACCATATTGAAGATCATTCCACAATGGATGTTGAGC...GCCTGTGCTGTATAGGGGCCCTATATCCACAAGAAAGGAAACAGCGTTCCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
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| 3UTR-3UTR CCA 90 bp | TGGACTAAAAATACCCACCGCCACCAAAGGAACGCTGTTTCCTTTCTTGTGGATATTTTTATGTTCACTTaGTCTGTAGCCATACCGCCC | + |
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Preference number: 2 (lower is better) Translates to: WTKNTHRHQRNAVSFLVDIFMFT*SVAIPP Trigger: GGGCGGTATGGCTACAGACCAAGTGAACATAAAAAT...ATCCACAAGAAAGGAAACAGCGTTCCTTTGGTGGCGGTGGGTATTTTTAGTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
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| 3UTR-3UTR CCA 90 bp | CACAGGCTGGCCTCAAACTCATGGTTTCTCTCCCCAAATCTCCAAGTTACAGGCAGTGTAACCTTGTGCTaGCATTCTATTATTTTCTAC | + |
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Preference number: 2 (lower is better) Translates to: HRLASNSWFLSPNLQVTGSVTLC*HSIIFY Trigger: GTAGAAAATAATAGAATGCCAGCACAAGGTTACACT...GCCTGTAACTTGGAGATTTGGGGAGAGAAACCATGAGTTTGAGGCCAGCCTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
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| 3UTR-3UTR TCA 90 bp | GTGTGTGTGTGTGGTGTAGTGTATGTATACAAGTTCATGCCCTATGCAGTACAGAGTCAGTTAAGTTCATaGATCATTAGGAACACTGGG | + |
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Preference number: 2 (lower is better) Translates to: VCVCGVVYVYKFMPYAVQSQLSS*IIRNTG Trigger: CCCAGTGTTCCTAATGATTCATGAACTTAACTGACT...CTGTACTGCATAGGGCATGAACTTGTATACATACACTACACCACACACACACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
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| 3UTR-3UTR TCA 90 bp | TATGGCTGGTGTTTACATATTCCACATGTGCTGCGGTGTCTAGGCACAAATAAGAGTACAGGAAAGCAGTaGCTCTACTATAAAGCTAAC | + |
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Preference number: 2 (lower is better) Translates to: YGWCLHIPHVLRCLGTNKSTGKQ*LYYKAN Trigger: GTTAGCTTTATAGTAGAGTCACTGCTTTCCTGTACT...CTTATTTGTGCCTAGACACCGCAGCACATGTGGAATATGTAAACACCAGCCATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
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| 3UTR-3UTR CCA 90 bp | TGGACTAAAAATACCCACCGCCACCAAAGGAACGCTGTTTCCTTTCTTGTGGATGTGATGCTAAATAAATaGCTCAACATCCATTGTGGA | + |
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Preference number: 2 (lower is better) Translates to: WTKNTHRHQRNAVSFLVDVMLNK*LNIHCG Trigger: TCCACAATGGATGTTGAGCCATTTATTTAGCATCAC...ATCCACAAGAAAGGAAACAGCGTTCCTTTGGTGGCGGTGGGTATTTTTAGTCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
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| 3UTR-3UTR GCA 90 bp | TATGGCTGGTGTTTACATATTCCACATGTGCTGCGGTGTCTAGGCACAAATAAGATGTATACAAGTTCATaGCCTATGCAGTACAGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: YGWCLHIPHVLRCLGTNKMYTSS*PMQYRK Trigger: TTTCCTGTACTGCATAGGGCATGAACTTGTATACAT...CTTATTTGTGCCTAGACACCGCAGCACATGTGGAATATGTAAACACCAGCCATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
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| 3UTR-3UTR CCA 90 bp | TGTGTATGTTACTTTTTACTGTTATTAGACCTTTCCCTCCCAGCAGTGTGGGTGAGCTCAGAGTTGAAATaGTTAAAAAGGCTAGGCACA | + |
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Preference number: 2 (lower is better) Translates to: CVCYFLLLLDLSLPAVWVSSELK*LKRLGT Trigger: TGTGCCTAGCCTTTTTAACCATTTCAACTCTGAGCT...CACCCACACTGCTGGGAGGGAAAGGTCTAATAACAGTAAAAAGTAACATACACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
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| 3UTR-3UTR TCA 90 bp | AAATCTACAGAGCACTTCGGAAGGTATTTCTTGTCTGTGATCACAGTTAGGAGTATGACTTCTCTATTCTaGCTGAGATGGCAAAAGTGT | + |
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Preference number: 2 (lower is better) Translates to: KSTEHFGRYFLSVITVRSMTSLF*LRWQKC Trigger: ACACTTTTGCCATCTCAGTCAGAATAGAGAAGTCAT...ACTCCTAACTGTGATCACAGACAAGAAATACCTTCCGAAGTGCTCTGTAGATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
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| 3UTR-3UTR GCA 90 bp | GTGTGTGTGTGTGGTGTAGTGTATGTATACAAGTTCATGCCCTATGCAGTACAGAACAATAGAAATGTTTaGAATCCCAGCACAGTAAGA | + |
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Preference number: 2 (lower is better) Translates to: VCVCGVVYVYKFMPYAVQNNRNV*NPSTVR Trigger: TCTTACTGTGCTGGGATTGCAAACATTTCTATTGTT...CTGTACTGCATAGGGCATGAACTTGTATACATACACTACACCACACACACACAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
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| 3UTR-3UTR TCA 90 bp | CATAAGAATATAACAATATGGCTGGTGTTTACATATTCCACATGTGCTGCGGTGAGTCAGTTAAGTTCATaGATCATTAGGAACACTGGG | + |
|
Preference number: 2 (lower is better) Translates to: HKNITIWLVFTYSTCAAVSQLSS*IIRNTG Trigger: CCCAGTGTTCCTAATGATTCATGAACTTAACTGACT...CACCGCAGCACATGTGGAATATGTAAACACCAGCCATATTGTTATATTCTTATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
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| 3UTR-3UTR TCA 90 bp | CATAAGAATATAACAATATGGCTGGTGTTTACATATTCCACATGTGCTGCGGTGAGTACAGGAAAGCAGTaGCTCTACTATAAAGCTAAC | + |
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Preference number: 2 (lower is better) Translates to: HKNITIWLVFTYSTCAAVSTGKQ*LYYKAN Trigger: GTTAGCTTTATAGTAGAGTCACTGCTTTCCTGTACT...CACCGCAGCACATGTGGAATATGTAAACACCAGCCATATTGTTATATTCTTATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
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| 3UTR-3UTR GCA 90 bp | CATAAGAATATAACAATATGGCTGGTGTTTACATATTCCACATGTGCTGCGGTGAACAATAGAAATGTTTaGAATCCCAGCACAGTAAGA | + |
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Preference number: 2 (lower is better) Translates to: HKNITIWLVFTYSTCAAVNNRNV*NPSTVR Trigger: TCTTACTGTGCTGGGATTGCAAACATTTCTATTGTT...CACCGCAGCACATGTGGAATATGTAAACACCAGCCATATTGTTATATTCTTATG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
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| 3UTR TCA 72 bp | CATGTGCTCCTGGGGCTGAGATCGCCTGTCAGGTTGTaGCACAGTGGGTCAGGAAGGAGCCAAACTGCAAAG | + |
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Preference number: 3 (lower is better) Translates to: HVLLGLRSPVRL*HSGSGRSQTAK Trigger: CTTTGCAGTTTGGCTCCTTCCTGACCCACTGTGTCACAACCTGACAGGCGATCTCAGCCCCAGGAGCACATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
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| 3UTR CCA 72 bp | CCTGGGGCTGAGATCGCCTGTCAGGTTGTGACACAGTaGGTCAGGAAGGAGCCAAACTGCAAAGGAAAACTT | + |
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Preference number: 3 (lower is better) Translates to: PGAEIACQVVTQ*VRKEPNCKGKL Trigger: AAGTTTTCCTTTGCAGTTTGGCTCCTTCCTGACCCACTGTGTCACAACCTGACAGGCGATCTCAGCCCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
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| 3UTR CCA 72 bp | CCCTCCCAGCAGTGTGGGTGGAGACAAACCTCCCTTTaGGAATGCAGGAGATCATTTCTAAAATGTGGGGGA | + |
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Preference number: 3 (lower is better) Translates to: PSQQCGWRQTSL*ECRRSFLKCGG Trigger: TCCCCCACATTTTAGAAATGATCTCCTGCATTCCCAAAGGGAGGTTTGTCTCCACCCACACTGCTGGGAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
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| 3UTR CCA 72 bp | AGGGCCCCTATACAGCACAGGCTGGCCTCAAACTCATaGTTTCTCTCCCCAAATCTCCAAGTTACAGGCATG | + |
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Preference number: 3 (lower is better) Translates to: RAPIQHRLASNS*FLSPNLQVTGM Trigger: CATGCCTGTAACTTGGAGATTTGGGGAGAGAAACCATGAGTTTGAGGCCAGCCTGTGCTGTATAGGGGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
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| 3UTR CCA 72 bp | TTTCTTGTGGATATAGGGCCCCTATACAGCACAGGCTaGCCTCAAACTCATGGTTTCTCTCCCCAAATCTCC | + |
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Preference number: 3 (lower is better) Translates to: FLVDIGPLYSTG*PQTHGFSPQIS Trigger: GGAGATTTGGGGAGAGAAACCATGAGTTTGAGGCCAGCCTGTGCTGTATAGGGGCCCTATATCCACAAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
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| 3UTR CCA 72 bp | TTTTTACTGTTATTAGACCTTTCCCTCCCAGCAGTGTaGGTGGAGACAAACCTCCCTTTGGGAATGCAGGAG | + |
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Preference number: 3 (lower is better) Translates to: FLLLLDLSLPAV*VETNLPLGMQE Trigger: CTCCTGCATTCCCAAAGGGAGGTTTGTCTCCACCCACACTGCTGGGAGGGAAAGGTCTAATAACAGTAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
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| 3UTR TCA 72 bp | ATGGCAAAAGTGTGTAGGGATGACTCATGGCTACTCTaGTTGTGTGGACTAAAAATACCCACCGCCACCAAA | + |
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Preference number: 3 (lower is better) Translates to: MAKVCRDDSWLL*LCGLKIPTATK Trigger: TTTGGTGGCGGTGGGTATTTTTAGTCCACACAATCAGAGTAGCCATGAGTCATCCCTACACACTTTTGCCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
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| 3UTR CCA 72 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTaGTGTAGTGTATGTATACAAGTTCATGCCCTATGC | + |
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Preference number: 3 (lower is better) Translates to: CVCVCVCVCVCV*CSVCIQVHALC Trigger: GCATAGGGCATGAACTTGTATACATACACTACACCACACACACACACACACACACACACACACACACACACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
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| 3UTR TCA 72 bp | ACCGGGCCCACTCTCTCTGCATCTTCTGATTTTCTGTaGAGTCCTGTACAGTTGTATAGAGGTAATACCTTT | + |
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Preference number: 3 (lower is better) Translates to: TGPTLSASSDFL*SPVQLYRGNTF Trigger: AAAGGTATTACCTCTATACAACTGTACAGGACTTCACAGAAAATCAGAAGATGCAGAGAGAGTGGGCCCGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
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| 3UTR GCA 72 bp | GGCAGAGGCAGGGAAACCGGAAGTTTAAGACAATTTTaGTATATCACAAGGTTAAGTCCAGCCTGGGATATA | + |
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Preference number: 3 (lower is better) Translates to: GRGRETGSLRQF*YITRLSPAWDI Trigger: TATATCCCAGGCTGGACTTAACCTTGTGATATAGCAAAATTGTCTTAAACTTCCGGTTTCCCTGCCTCTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
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| 3UTR-3UTR CAA 90 bp | AGAGGCAGGGAAACCGGAAGTTTAAGACAATTTTGCTATATCACAAGGTTAAGTCATTTTTATGTTCACTaGGTCTGTAGCCATACCGCC | + |
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Preference number: 3 (lower is better) Translates to: RGRETGSLRQFCYITRLSHFYVH*VCSHTA Trigger: GGCGGTATGGCTACAGACCAAGTGAACATAAAAATG...ACTTAACCTTGTGATATAGCAAAATTGTCTTAAACTTCCGGTTTCCCTGCCTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
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| 3UTR-3UTR CAA 90 bp | TGTGTATGTTACTTTTTACTGTTATTAGACCTTTCCCTCCCAGCAGTGTGGGTGATGGCTCAACATCCATaGTGGAATGATCTTCAATAT | + |
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Preference number: 3 (lower is better) Translates to: CVCYFLLLLDLSLPAVWVMAQHP*WNDLQY Trigger: ATATTGAAGATCATTCCACAATGGATGTTGAGCCAT...CACCCACACTGCTGGGAGGGAAAGGTCTAATAACAGTAAAAAGTAACATACACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
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| CDS-3UTR CCA 90 bp | CACAGGCTGGCCTCAAACTCATGGTTTCTCTCCCCAAATCTCCAAGTTACAGGCAGTTACTGGCTTTGGTaGGTGCAGTGGGCTTTTTGG | + |
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Preference number: 4 (lower is better) Translates to: HRLASNSWFLSPNLQVTGSYWLW*VQWAFW Trigger: CCAAAAAGCCCACTGCACCCACCAAAGCCAGTAACT...GCCTGTAACTTGGAGATTTGGGGAGAGAAACCATGAGTTTGAGGCCAGCCTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
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| CDS-3UTR TCA 90 bp | CTGTTAAGACCGGGCCCACTCTCTCTGCATCTTCTGATTTTCTGTGAAGTCCTGGTTTGTGGATGTGGCTaGATTCCTCCAGCTGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: LLRPGPLSLHLLIFCEVLVCGCG*IPPAGS Trigger: ACTTCCAGCTGGAGGAATTCAGCCACATCCACAAAC...CAGGACTTCACAGAAAATCAGAAGATGCAGAGAGAGTGGGCCCGGTCTTAACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
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| CDS-3UTR GCA 90 bp | CTGTTAAGACCGGGCCCACTCTCTCTGCATCTTCTGATTTTCTGTGAAGTCCTGTGGAGCTGGACCTTTTaGAGGAGGAGGTGGTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: LLRPGPLSLHLLIFCEVLWSWTF*RRRWFL Trigger: AAGAAACCACCTCCTCCTGCAAAAGGTCCAGCTCCA...CAGGACTTCACAGAAAATCAGAAGATGCAGAGAGAGTGGGCCCGGTCTTAACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
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| CDS-3UTR GCA 90 bp | GTGTGTGTGTGTGGTGTAGTGTATGTATACAAGTTCATGCCCTATGCAGTACAGACTGGCTTTGGTGGGTaGAGTGGGCTTTTTGGGCGG | + |
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Preference number: 4 (lower is better) Translates to: VCVCGVVYVYKFMPYAVQTGFGG*SGLFGR Trigger: CCGCCCAAAAAGCCCACTGCACCCACCAAAGCCAGT...CTGTACTGCATAGGGCATGAACTTGTATACATACACTACACCACACACACACAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGGTGTAGTGTATGTATACAAGTTCATGCCCTATGCAGTACAGTTTGGCTGCTGGAGGTaGCGGAGGGACTGGCTTTTC | + |
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Preference number: 4 (lower is better) Translates to: VCVCGVVYVYKFMPYAVQFGCWR*RRDWLF Trigger: GAAAAGCCAGTCCCTCCGCCACCTCCAGCAGCCAAA...CTGTACTGCATAGGGCATGAACTTGTATACATACACTACACCACACACACACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
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| CDS-3UTR CCA 90 bp | CACAGGCTGGCCTCAAACTCATGGTTTCTCTCCCCAAATCTCCAAGTTACAGGCGACTTGAGGAGCAGCTaGTTTAGAAGGTTTCTGTTC | + |
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Preference number: 4 (lower is better) Translates to: HRLASNSWFLSPNLQVTGDLRSS*FRRFLF Trigger: GAACAGAAACCTTCTAAACCAGCTGCTCCTCAAGTC...GCCTGTAACTTGGAGATTTGGGGAGAGAAACCATGAGTTTGAGGCCAGCCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
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| CDS-3UTR CCA 90 bp | TATGGCTGGTGTTTACATATTCCACATGTGCTGCGGTGTCTAGGCACAAATAAGAGGGACTGGCTTTTCTaGCCGCTTTGGGTACACTGC | + |
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Preference number: 4 (lower is better) Translates to: YGWCLHIPHVLRCLGTNKRDWLF*PLWVHC Trigger: GCAGTGTACCCAAAGCGGCCAGAAAAGCCAGTCCCT...CTTATTTGTGCCTAGACACCGCAGCACATGTGGAATATGTAAACACCAGCCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGGTGTAGTGTATGTATACAAGTTCATGCCCTATGCAGTACAGAGGGACTGGCTTTTCTaGCCGCTTTGGGTACACTGC | + |
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Preference number: 4 (lower is better) Translates to: VCVCGVVYVYKFMPYAVQRDWLF*PLWVHC Trigger: GCAGTGTACCCAAAGCGGCCAGAAAAGCCAGTCCCT...CTGTACTGCATAGGGCATGAACTTGTATACATACACTACACCACACACACACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
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| CDS-3UTR TCA 90 bp | CAAAGGAACGCTGTTTCCTTTCTTGTGGATATAGGGCCCCTATACAGCACAGGCGAAGTCCATAAGTGCTaGTTCGCTGTACAAGACTTG | + |
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Preference number: 4 (lower is better) Translates to: QRNAVSFLVDIGPLYSTGEVHKC*FAVQDL Trigger: CAAGTCTTGTACAGCGAATCAGCACTTATGGACTTC...GCCTGTGCTGTATAGGGGCCCTATATCCACAAGAAAGGAAACAGCGTTCCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
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| CDS-3UTR TCA 90 bp | TGGACTAAAAATACCCACCGCCACCAAAGGAACGCTGTTTCCTTTCTTGTGGATTTTTTGGGCGGGACTTaGGGAGCAGCTGGTTTAGAA | + |
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Preference number: 4 (lower is better) Translates to: WTKNTHRHQRNAVSFLVDFLGGT*GAAGLE Trigger: TTCTAAACCAGCTGCTCCTCAAGTCCCGCCCAAAAA...ATCCACAAGAAAGGAAACAGCGTTCCTTTGGTGGCGGTGGGTATTTTTAGTCCA 48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
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| CDS-3UTR TCA 90 bp | CAAAGGAACGCTGTTTCCTTTCTTGTGGATATAGGGCCCCTATACAGCACAGGCGGCATCAAGGTCTACTaGTTTTGGTCTAACTGGCAA | + |
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Preference number: 4 (lower is better) Translates to: QRNAVSFLVDIGPLYSTGGIKVY*FWSNWQ Trigger: TTGCCAGTTAGACCAAAATCAGTAGACCTTGATGCC...GCCTGTGCTGTATAGGGGCCCTATATCCACAAGAAAGGAAACAGCGTTCCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
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| CDS-3UTR GCA 90 bp | TATGGCTGGTGTTTACATATTCCACATGTGCTGCGGTGTCTAGGCACAAATAAGTCCATTAATTTTGGCTaGTGGAGGTGGCGGAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: YGWCLHIPHVLRCLGTNKSINFG*WRWRRD Trigger: GTCCCTCCGCCACCTCCAGCAGCCAAAATTAATGGA...CTTATTTGTGCCTAGACACCGCAGCACATGTGGAATATGTAAACACCAGCCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
||
| CDS-3UTR CCA 90 bp | CCCCTATACAGCACAGGCTGGCCTCAAACTCATGGTTTCTCTCCCCAAATCTCCAACAATTCAATAATCTaGGCTCTAAGTTCGTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: PLYSTGWPQTHGFSPQISNNSII*ALSSST Trigger: CGTGGACGAACTTAGAGCCCAGATTATTGAATTGTT...GGAGATTTGGGGAGAGAAACCATGAGTTTGAGGCCAGCCTGTGCTGTATAGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
||
| CDS-3UTR TCA 90 bp | TATGGCTGGTGTTTACATATTCCACATGTGCTGCGGTGTCTAGGCACAAATAAGGTTACCTCCACATTCTaGGTTCTAGATCCCAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: YGWCLHIPHVLRCLGTNKVTSTF*VLDPRG Trigger: GCCTCTGGGATCTAGAACTCAGAATGTGGAGGTAAC...CTTATTTGTGCCTAGACACCGCAGCACATGTGGAATATGTAAACACCAGCCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
||
| CDS-3UTR TCA 90 bp | TATGGCTGGTGTTTACATATTCCACATGTGCTGCGGTGTCTAGGCACAAATAAGTTTTTGGGCGGGACTTaGGGAGCAGCTGGTTTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: YGWCLHIPHVLRCLGTNKFLGGT*GAAGLE Trigger: TTCTAAACCAGCTGCTCCTCAAGTCCCGCCCAAAAA...CTTATTTGTGCCTAGACACCGCAGCACATGTGGAATATGTAAACACCAGCCATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
||
| CDS-3UTR GCA 90 bp | AGAGGCAGGGAAACCGGAAGTTTAAGACAATTTTGCTATATCACAAGGTTAAGTACTGGCTTTGGTGGGTaGAGTGGGCTTTTTGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RGRETGSLRQFCYITRLSTGFGG*SGLFGR Trigger: CCGCCCAAAAAGCCCACTGCACCCACCAAAGCCAGT...ACTTAACCTTGTGATATAGCAAAATTGTCTTAAACTTCCGGTTTCCCTGCCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
||
| CDS-3UTR CCA 90 bp | TATGGCTGGTGTTTACATATTCCACATGTGCTGCGGTGTCTAGGCACAAATAAGAGTTACTGGCTTTGGTaGGTGCAGTGGGCTTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: YGWCLHIPHVLRCLGTNKSYWLW*VQWAFW Trigger: CCAAAAAGCCCACTGCACCCACCAAAGCCAGTAACT...CTTATTTGTGCCTAGACACCGCAGCACATGTGGAATATGTAAACACCAGCCATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
||
| CDS-3UTR CCA 90 bp | CATAAGAATATAACAATATGGCTGGTGTTTACATATTCCACATGTGCTGCGGTGTTTGGCTGCTGGAGGTaGCGGAGGGACTGGCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HKNITIWLVFTYSTCAAVFGCWR*RRDWLF Trigger: GAAAAGCCAGTCCCTCCGCCACCTCCAGCAGCCAAA...CACCGCAGCACATGTGGAATATGTAAACACCAGCCATATTGTTATATTCTTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
||
| 3UTR CAA 72 bp | CATGTCGCCCTACAGATACAACATTTTTATGTTCACTaGGTCTGTAGCCATACCGCCCTGATAGTGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: HVALQIQHFYVH*VCSHTALIVAE Trigger: CTCAGCCACTATCAGGGCGGTATGGCTACAGACCAAGTGAACATAAAAATGTTGTATCTGTAGGGCGACATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
||
| CDS-3UTR GCA 90 bp | TATGGCTGGTGTTTACATATTCCACATGTGCTGCGGTGTCTAGGCACAAATAAGCTTGCTACATTTCCTTaGCTTTCCCGTTTGATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: YGWCLHIPHVLRCLGTNKLATFP*LSRLMG Trigger: GCCCATCAAACGGGAAAGGCAAGGAAATGTAGCAAG...CTTATTTGTGCCTAGACACCGCAGCACATGTGGAATATGTAAACACCAGCCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
||
| CDS-3UTR CCA 90 bp | TATGGCTGGTGTTTACATATTCCACATGTGCTGCGGTGTCTAGGCACAAATAAGGTAAGTTACTGGCTTTaGTGGGTGCAGTGGGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: YGWCLHIPHVLRCLGTNKVSYWL*WVQWAF Trigger: AAAAGCCCACTGCACCCACCAAAGCCAGTAACTTAC...CTTATTTGTGCCTAGACACCGCAGCACATGTGGAATATGTAAACACCAGCCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
||
| CDS-3UTR CCA 90 bp | TATGGCTGGTGTTTACATATTCCACATGTGCTGCGGTGTCTAGGCACAAATAAGTTCTGGGCTTTGGGTTaGAGAATGTCCACCGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: YGWCLHIPHVLRCLGTNKFWALG*RMSTVE Trigger: TTCAACGGTGGACATTCTCCAACCCAAAGCCCAGAA...CTTATTTGTGCCTAGACACCGCAGCACATGTGGAATATGTAAACACCAGCCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
||
| CDS-3UTR TCA 90 bp | TATGGCTGGTGTTTACATATTCCACATGTGCTGCGGTGTCTAGGCACAAATAAGGGCATCAAGGTCTACTaGTTTTGGTCTAACTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: YGWCLHIPHVLRCLGTNKGIKVY*FWSNWQ Trigger: TTGCCAGTTAGACCAAAATCAGTAGACCTTGATGCC...CTTATTTGTGCCTAGACACCGCAGCACATGTGGAATATGTAAACACCAGCCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
||
| CDS-3UTR GCA 90 bp | AGAGGCAGGGAAACCGGAAGTTTAAGACAATTTTGCTATATCACAAGGTTAAGTACCCTTCCACCAGCCTaGTTCTCCAGTCTCCTTACT | + |
|
Preference number: 4 (lower is better) Translates to: RGRETGSLRQFCYITRLSTLPPA*FSSLLT Trigger: AGTAAGGAGACTGGAGAAGCAGGCTGGTGGAAGGGT...ACTTAACCTTGTGATATAGCAAAATTGTCTTAAACTTCCGGTTTCCCTGCCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
||
| CDS-3UTR GCA 90 bp | CATAAGAATATAACAATATGGCTGGTGTTTACATATTCCACATGTGCTGCGGTGACCCTTCCACCAGCCTaGTTCTCCAGTCTCCTTACT | + |
|
Preference number: 4 (lower is better) Translates to: HKNITIWLVFTYSTCAAVTLPPA*FSSLLT Trigger: AGTAAGGAGACTGGAGAAGCAGGCTGGTGGAAGGGT...CACCGCAGCACATGTGGAATATGTAAACACCAGCCATATTGTTATATTCTTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
||
| CDS-3UTR CCA 90 bp | TATGGCTGGTGTTTACATATTCCACATGTGCTGCGGTGTCTAGGCACAAATAAGGACTTGAGGAGCAGCTaGTTTAGAAGGTTTCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: YGWCLHIPHVLRCLGTNKDLRSS*FRRFLF Trigger: GAACAGAAACCTTCTAAACCAGCTGCTCCTCAAGTC...CTTATTTGTGCCTAGACACCGCAGCACATGTGGAATATGTAAACACCAGCCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
||
| 3UTR CAA 72 bp | AGGCAGAGGCAGGGAAACCGGAAGTTTAAGACAATTTaGCTATATCACAAGGTTAAGTCCAGCCTGGGATAT | + |
|
Preference number: 4 (lower is better) Translates to: RQRQGNRKFKTI*LYHKVKSSLGY Trigger: ATATCCCAGGCTGGACTTAACCTTGTGATATAGCAAAATTGTCTTAAACTTCCGGTTTCCCTGCCTCTGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
||
| CDS-3UTR TCA 90 bp | CATAAGAATATAACAATATGGCTGGTGTTTACATATTCCACATGTGCTGCGGTGGTTACCTCCACATTCTaGGTTCTAGATCCCAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: HKNITIWLVFTYSTCAAVVTSTF*VLDPRG Trigger: GCCTCTGGGATCTAGAACTCAGAATGTGGAGGTAAC...CACCGCAGCACATGTGGAATATGTAAACACCAGCCATATTGTTATATTCTTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGGTGTAGTGTATGTATACAAGTTCATGCCCTATGCAGTACAGCCTCTGTTTCACTACTaGAAGTTCTTGTCCGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: VCVCGVVYVYKFMPYAVQPLFHY*KFLSEV Trigger: AACTTCGGACAAGAACTTCCAGTAGTGAAACAGAGG...CTGTACTGCATAGGGCATGAACTTGTATACATACACTACACCACACACACACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
||
| CDS-3UTR CCA 90 bp | TATGGCTGGTGTTTACATATTCCACATGTGCTGCGGTGTCTAGGCACAAATAAGCTTGCCATCAACGTCTaGTTTTGTTACCTCCACATT | + |
|
Preference number: 4 (lower is better) Translates to: YGWCLHIPHVLRCLGTNKLAINV*FCYLHI Trigger: AATGTGGAGGTAACAAAACCAGACGTTGATGGCAAG...CTTATTTGTGCCTAGACACCGCAGCACATGTGGAATATGTAAACACCAGCCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
||
| CDS-3UTR CCA 90 bp | AGGGAAACCGGAAGTTTAAGACAATTTTGCTATATCACAAGGTTAAGTCCAGCCGTAAGTTACTGGCTTTaGTGGGTGCAGTGGGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RETGSLRQFCYITRLSPAVSYWL*WVQWAF Trigger: AAAAGCCCACTGCACCCACCAAAGCCAGTAACTTAC...GGCTGGACTTAACCTTGTGATATAGCAAAATTGTCTTAAACTTCCGGTTTCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
||
| CDS-3UTR TCA 90 bp | AGAGGCAGGGAAACCGGAAGTTTAAGACAATTTTGCTATATCACAAGGTTAAGTCTTGCCTTTCCCGTTTaGTGGGCAAATTGTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: RGRETGSLRQFCYITRLSLAFPV*WANCHP Trigger: AGGATGACAATTTGCCCATCAAACGGGAAAGGCAAG...ACTTAACCTTGTGATATAGCAAAATTGTCTTAAACTTCCGGTTTCCCTGCCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
||
| CDS-3UTR TCA 90 bp | TGTGTATGTTACTTTTTACTGTTATTAGACCTTTCCCTCCCAGCAGTGTGGGTGATCATCTGTTTCTTTTaGGTTCCTGGCTACAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: CVCYFLLLLDLSLPAVWVIICFF*VPGYKG Trigger: GCCTTTGTAGCCAGGAACTCAAAAGAAACAGATGAT...CACCCACACTGCTGGGAGGGAAAGGTCTAATAACAGTAAAAAGTAACATACACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
||
| CDS-3UTR TCA 90 bp | TGTACAATTAGCTCTCCCCAGAATCTAATCAAGTGTAACCTTGTGCTGGCATTCTCCAGTTCTTTCCCATaGTCCTTTTTCAGTGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: CTISSPQNLIKCNLVLAFSSSFP*SFFSAS Trigger: AGATGCACTGAAAAAGGATCATGGGAAAGAACTGGA...GAATGCCAGCACAAGGTTACACTTGATTAGATTCTGGGGAGAGCTAATTGTACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
||
| CDS-3UTR CCA 90 bp | AAATCTACAGAGCACTTCGGAAGGTATTTCTTGTCTGTGATCACAGTTAGGAGTCTGAATTCCTCCAGCTaGAAGTCCATAAGTGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: KSTEHFGRYFLSVITVRSLNSSS*KSISAD Trigger: ATCAGCACTTATGGACTTCCAGCTGGAGGAATTCAG...ACTCCTAACTGTGATCACAGACAAGAAATACCTTCCGAAGTGCTCTGTAGATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
||
| CDS-3UTR CCA 90 bp | TGTGTATGTTACTTTTTACTGTTATTAGACCTTTCCCTCCCAGCAGTGTGGGTGAATAGCTTTGGTTTGTaGATGTGGCTGAATTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CVCYFLLLLDLSLPAVWVNSFGL*MWLNSS Trigger: GGAGGAATTCAGCCACATCCACAAACCAAAGCTATT...CACCCACACTGCTGGGAGGGAAAGGTCTAATAACAGTAAAAAGTAACATACACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
||
| CDS-3UTR CCA 90 bp | TGTACAATTAGCTCTCCCCAGAATCTAATCAAGTGTAACCTTGTGCTGGCATTCCTTGCCATCAACGTCTaGTTTTGTTACCTCCACATT | + |
|
Preference number: 4 (lower is better) Translates to: CTISSPQNLIKCNLVLAFLAINV*FCYLHI Trigger: AATGTGGAGGTAACAAAACCAGACGTTGATGGCAAG...GAATGCCAGCACAAGGTTACACTTGATTAGATTCTGGGGAGAGCTAATTGTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
||
| CDS-3UTR CCA 90 bp | TATGGCTGGTGTTTACATATTCCACATGTGCTGCGGTGTCTAGGCACAAATAAGAACAATTCAATAATCTaGGCTCTAAGTTCGTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: YGWCLHIPHVLRCLGTNKNNSII*ALSSST Trigger: CGTGGACGAACTTAGAGCCCAGATTATTGAATTGTT...CTTATTTGTGCCTAGACACCGCAGCACATGTGGAATATGTAAACACCAGCCATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGGTGTAGTGTATGTATACAAGTTCATGCCCTATGCAGTACAGTTCGTCCTCATTTTGTaGAGAGTAGTCAAAAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: VCVCGVVYVYKFMPYAVQFVLIL*RVVKKN Trigger: GTTCTTTTTGACTACTCTCCACAAAATGAGGACGAA...CTGTACTGCATAGGGCATGAACTTGTATACATACACTACACCACACACACACAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
||
| CDS-3UTR CCA 90 bp | AAATCTACAGAGCACTTCGGAAGGTATTTCTTGTCTGTGATCACAGTTAGGAGTCCTCTGTTTCACTACTaGAAGTTCTTGTCCGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: KSTEHFGRYFLSVITVRSPLFHY*KFLSEV Trigger: AACTTCGGACAAGAACTTCCAGTAGTGAAACAGAGG...ACTCCTAACTGTGATCACAGACAAGAAATACCTTCCGAAGTGCTCTGTAGATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGGTGTAGTGTATGTATACAAGTTCATGCCCTATGCAGTACAGCTAGATTACTTCGCATaGCCTTCTCTTCTTCTAATT | + |
|
Preference number: 4 (lower is better) Translates to: VCVCGVVYVYKFMPYAVQLDYFA*PSLLLI Trigger: AATTAGAAGAAGAGAAGGCCATGCGAAGTAATCTAG...CTGTACTGCATAGGGCATGAACTTGTATACATACACTACACCACACACACACAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
||
| CDS-3UTR TCA 90 bp | CATAAGAATATAACAATATGGCTGGTGTTTACATATTCCACATGTGCTGCGGTGATCATCTGTTTCTTTTaGGTTCCTGGCTACAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: HKNITIWLVFTYSTCAAVIICFF*VPGYKG Trigger: GCCTTTGTAGCCAGGAACTCAAAAGAAACAGATGAT...CACCGCAGCACATGTGGAATATGTAAACACCAGCCATATTGTTATATTCTTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
||
| CDS-3UTR TCA 90 bp | CATAAGAATATAACAATATGGCTGGTGTTTACATATTCCACATGTGCTGCGGTGTCCAGTTCTTTCCCATaGTCCTTTTTCAGTGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: HKNITIWLVFTYSTCAAVSSSFP*SFFSAS Trigger: AGATGCACTGAAAAAGGATCATGGGAAAGAACTGGA...CACCGCAGCACATGTGGAATATGTAAACACCAGCCATATTGTTATATTCTTATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
||
| CDS-3UTR GCA 90 bp | CATAAGAATATAACAATATGGCTGGTGTTTACATATTCCACATGTGCTGCGGTGTCGCTGTACAAGACTTaGTACATTTCCTTGCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HKNITIWLVFTYSTCAAVSLYKT*YISLPF Trigger: GAAAGGCAAGGAAATGTAGCAAGTCTTGTACAGCGA...CACCGCAGCACATGTGGAATATGTAAACACCAGCCATATTGTTATATTCTTATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
||
| CDS-3UTR GCA 90 bp | TATGGCTGGTGTTTACATATTCCACATGTGCTGCGGTGTCTAGGCACAAATAAGCTTCTTCTAATTCTTTaGGTAGCTTTTCCAGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: YGWCLHIPHVLRCLGTNKLLLIL*VAFPVL Trigger: AAGAACTGGAAAAGCTACGCAAAGAATTAGAAGAAG...CTTATTTGTGCCTAGACACCGCAGCACATGTGGAATATGTAAACACCAGCCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
||
| CDS-3UTR CCA 90 bp | TATGGCTGGTGTTTACATATTCCACATGTGCTGCGGTGTCTAGGCACAAATAAGTCCTTACTTATCAAATaGATAATCTCCCCTTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: YGWCLHIPHVLRCLGTNKSLLIK*IISPSL Trigger: TAGAGAAGGGGAGATTATCCATTTGATAAGTAAGGA...CTTATTTGTGCCTAGACACCGCAGCACATGTGGAATATGTAAACACCAGCCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
||
| CDS-3UTR GCA 90 bp | CATAAGAATATAACAATATGGCTGGTGTTTACATATTCCACATGTGCTGCGGTGTCTTTTCCCATCATCTaGTTCTGCTTTAGCTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: HKNITIWLVFTYSTCAAVSFPII*FCFSFE Trigger: CTCAAAGCTAAAGCAGAAGCAGATGATGGGAAAAGA...CACCGCAGCACATGTGGAATATGTAAACACCAGCCATATTGTTATATTCTTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
||
| CDS-3UTR CCA 90 bp | AAATCTACAGAGCACTTCGGAAGGTATTTCTTGTCTGTGATCACAGTTAGGAGTTTCGTCCTCATTTTGTaGAGAGTAGTCAAAAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: KSTEHFGRYFLSVITVRSFVLIL*RVVKKN Trigger: GTTCTTTTTGACTACTCTCCACAAAATGAGGACGAA...ACTCCTAACTGTGATCACAGACAAGAAATACCTTCCGAAGTGCTCTGTAGATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
||
| CDS-3UTR CCA 90 bp | AAATCTACAGAGCACTTCGGAAGGTATTTCTTGTCTGTGATCACAGTTAGGAGTTTTCACCATCCTCTGTaGACTCTAATTCTTTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: KSTEHFGRYFLSVITVRSFHHPL*TLILSQ Trigger: TTGTGAAAGAATTAGAGTCCACAGAGGATGGTGAAA...ACTCCTAACTGTGATCACAGACAAGAAATACCTTCCGAAGTGCTCTGTAGATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
||
| CDS-3UTR GCA 90 bp | AGGGAAACCGGAAGTTTAAGACAATTTTGCTATATCACAAGGTTAAGTCCAGCCCTTCTTCTAATTCTTTaGGTAGCTTTTCCAGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RETGSLRQFCYITRLSPALLLIL*VAFPVL Trigger: AAGAACTGGAAAAGCTACGCAAAGAATTAGAAGAAG...GGCTGGACTTAACCTTGTGATATAGCAAAATTGTCTTAAACTTCCGGTTTCCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
||
| CDS-3UTR CCA 90 bp | CATAAGAATATAACAATATGGCTGGTGTTTACATATTCCACATGTGCTGCGGTGAGGAGGTGGTTTCTTTaGTTTTGGAAAGTCTTTATC | + |
|
Preference number: 4 (lower is better) Translates to: HKNITIWLVFTYSTCAAVRRWFL*FWKVFI Trigger: GATAAAGACTTTCCAAAACCAAAGAAACCACCTCCT...CACCGCAGCACATGTGGAATATGTAAACACCAGCCATATTGTTATATTCTTATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
||
| CDS-3UTR CCA 90 bp | CATAAGAATATAACAATATGGCTGGTGTTTACATATTCCACATGTGCTGCGGTGTCCTTACTTATCAAATaGATAATCTCCCCTTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: HKNITIWLVFTYSTCAAVSLLIK*IISPSL Trigger: TAGAGAAGGGGAGATTATCCATTTGATAAGTAAGGA...CACCGCAGCACATGTGGAATATGTAAACACCAGCCATATTGTTATATTCTTATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
||
| CDS CCA 90 bp | CTGGCCGCTTTGGGTACACTGCTCCAGGCGACCTCAGTAAGTTACTaGCTTTGGTGGGTGCAGTGGGCTTTTTGGGCGGGACTTGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LAALGTLLQATSVSY*LWWVQWAFWAGLEE Trigger: CTCCTCAAGTCCCGCCCAAAAAGCCCACTGCACCCACCAAAGCCAGTAACTTACTGAGGTCGCCTGGAGCAGTGTACCCAAAGCGGCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
||
| CDS CCA 90 bp | GCTTTGGGTACACTGCTCCAGGCGACCTCAGTAAGTTACTGGCTTTaGTGGGTGCAGTGGGCTTTTTGGGCGGGACTTGAGGAGCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ALGTLLQATSVSYWL*WVQWAFWAGLEEQL Trigger: CAGCTGCTCCTCAAGTCCCGCCCAAAAAGCCCACTGCACCCACCAAAGCCAGTAACTTACTGAGGTCGCCTGGAGCAGTGTACCCAAAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
||
| CDS TCA 90 bp | GATGTCTCCAAATCCAATTCCTCGGATTTTCTTTGGCTGTGCAACTaGTCCGGGAGCAGGTTCACTCCCATTCCCCGGAGATGGCAACGG | + |
|
Preference number: 5 (lower is better) Translates to: DVSKSNSSDFLWLCN*SGSRFTPIPRRWQR Trigger: CCGTTGCCATCTCCGGGGAATGGGAGTGAACCTGCTCCCGGATCAGTTGCACAGCCAAAGAAAATCCGAGGAATTGGATTTGGAGACATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
||
| CDS-3UTR CAA 90 bp | CAAAGGAACGCTGTTTCCTTTCTTGTGGATATAGGGCCCCTATACAGCACAGGCGGAGAATGTCCACCGTaGAAGCGGCCAGGCAATCGT | + |
|
Preference number: 5 (lower is better) Translates to: QRNAVSFLVDIGPLYSTGGECPP*KRPGNR Trigger: ACGATTGCCTGGCCGCTTCAACGGTGGACATTCTCC...GCCTGTGCTGTATAGGGGCCCTATATCCACAAGAAAGGAAACAGCGTTCCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
||
| CDS-3UTR CAA 90 bp | CACAGGCTGGCCTCAAACTCATGGTTTCTCTCCCCAAATCTCCAAGTTACAGGCTTGGAGCTGGACCTTTaGCAGGAGGAGGTGGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: HRLASNSWFLSPNLQVTGLELDL*QEEVVS Trigger: AGAAACCACCTCCTCCTGCAAAAGGTCCAGCTCCAA...GCCTGTAACTTGGAGATTTGGGGAGAGAAACCATGAGTTTGAGGCCAGCCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
||
| CDS-3UTR CAA 90 bp | CCCCTATACAGCACAGGCTGGCCTCAAACTCATGGTTTCTCTCCCCAAATCTCCCGTTTGATGGGCAAATaGTCATCCTTGGGTTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: PLYSTGWPQTHGFSPQISRLMGK*SSLGSV Trigger: GACAGAACCCAAGGATGACAATTTGCCCATCAAACG...GGAGATTTGGGGAGAGAAACCATGAGTTTGAGGCCAGCCTGTGCTGTATAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
||
| CDS-3UTR CAA 90 bp | CTGTTAAGACCGGGCCCACTCTCTCTGCATCTTCTGATTTTCTGTGAAGTCCTGCTTTTTGGGCGGGACTaGAGGAGCAGCTGGTTTAGA | + |
|
Preference number: 5 (lower is better) Translates to: LLRPGPLSLHLLIFCEVLLFGRD*RSSWFR Trigger: TCTAAACCAGCTGCTCCTCAAGTCCCGCCCAAAAAG...CAGGACTTCACAGAAAATCAGAAGATGCAGAGAGAGTGGGCCCGGTCTTAACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
||
| CDS-3UTR CAA 90 bp | TATGGCTGGTGTTTACATATTCCACATGTGCTGCGGTGTCTAGGCACAAATAAGGGAGAATGTCCACCGTaGAAGCGGCCAGGCAATCGT | + |
|
Preference number: 5 (lower is better) Translates to: YGWCLHIPHVLRCLGTNKGECPP*KRPGNR Trigger: ACGATTGCCTGGCCGCTTCAACGGTGGACATTCTCC...CTTATTTGTGCCTAGACACCGCAGCACATGTGGAATATGTAAACACCAGCCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
||
| CDS TCA 90 bp | AAGTTACTGGCTTTGGTGGGTGCAGTGGGCTTTTTGGGCGGGACTTaGGGAGCAGCTGGTTTAGAAGGTTTCTGTTCTAACAGTGATTTT | + |
|
Preference number: 5 (lower is better) Translates to: KLLALVGAVGFLGGT*GAAGLEGFCSNSDF Trigger: AAAATCACTGTTAGAACAGAAACCTTCTAAACCAGCTGCTCCTCAAGTCCCGCCCAAAAAGCCCACTGCACCCACCAAAGCCAGTAACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
||
| CDS-3UTR CAA 90 bp | CTGTTAAGACCGGGCCCACTCTCTCTGCATCTTCTGATTTTCTGTGAAGTCCTGGTTCAGGATCTAGCTTaGGTTTTGATACTGGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LLRPGPLSLHLLIFCEVLVQDLA*VLILAQ Trigger: CTGAGCCAGTATCAAAACCAAAGCTAGATCCTGAAC...CAGGACTTCACAGAAAATCAGAAGATGCAGAGAGAGTGGGCCCGGTCTTAACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
||
| CDS TCA 90 bp | TTTGTGGATGTGGCTGAATTCCTCCAGCTGGAAGTCCATAAGTGCTaGTTCGCTGTACAAGACTTGCTACATTTCCTTGCCTTTCCCGTT | + |
|
Preference number: 5 (lower is better) Translates to: FVDVAEFLQLEVHKC*FAVQDLLHFLAFPV Trigger: AACGGGAAAGGCAAGGAAATGTAGCAAGTCTTGTACAGCGAATCAGCACTTATGGACTTCCAGCTGGAGGAATTCAGCCACATCCACAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGGTGTAGTGTATGTATACAAGTTCATGCCCTATGCAGTACAGCGTCTTCCAGGCATCTaGGGTCTATTAGCAGTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: VCVCGVVYVYKFMPYAVQRLPGI*GLLAVR Trigger: TCTCACTGCTAATAGACCCAAGATGCCTGGAAGACG...CTGTACTGCATAGGGCATGAACTTGTATACATACACTACACCACACACACACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGGTGTAGTGTATGTATACAAGTTCATGCCCTATGCAGTACAGGGCAAATTGTCATCCTaGGGTTCTGTCTCTCGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: VCVCGVVYVYKFMPYAVQGKLSS*GSVSRL Trigger: TAAGCGAGAGACAGAACCCAAGGATGACAATTTGCC...CTGTACTGCATAGGGCATGAACTTGTATACATACACTACACCACACACACACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
||
| CDS-3UTR CAA 90 bp | TATGGCTGGTGTTTACATATTCCACATGTGCTGCGGTGTCTAGGCACAAATAAGACTTGCTACATTTCCTaGCCTTTCCCGTTTGATGGG | + |
|
Preference number: 5 (lower is better) Translates to: YGWCLHIPHVLRCLGTNKTCYIS*PFPFDG Trigger: CCCATCAAACGGGAAAGGCAAGGAAATGTAGCAAGT...CTTATTTGTGCCTAGACACCGCAGCACATGTGGAATATGTAAACACCAGCCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGGTGTAGTGTATGTATACAAGTTCATGCCCTATGCAGTACAGAACAGTCCCAACTTATaGTTCAGGGTTCCACTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: VCVCGVVYVYKFMPYAVQNSPNL*FRVPLH Trigger: GTGGAGTGGAACCCTGAACAATAAGTTGGGACTGTT...CTGTACTGCATAGGGCATGAACTTGTATACATACACTACACCACACACACACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGGTGTAGTGTATGTATACAAGTTCATGCCCTATGCAGTACAGCACTACTGGAAGTTCTaGTCCGAAGTTTCACAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VCVCGVVYVYKFMPYAVQHYWKF*SEVSQS Trigger: GCTCTGTGAAACTTCGGACAAGAACTTCCAGTAGTG...CTGTACTGCATAGGGCATGAACTTGTATACATACACTACACCACACACACACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
||
| CDS-3UTR CAA 90 bp | CAAAGGAACGCTGTTTCCTTTCTTGTGGATATAGGGCCCCTATACAGCACAGGCGATCTAGCTTTGGTTTaGATACTGGCTCAGTATCAA | + |
|
Preference number: 5 (lower is better) Translates to: QRNAVSFLVDIGPLYSTGDLALV*ILAQYQ Trigger: TTGATACTGAGCCAGTATCAAAACCAAAGCTAGATC...GCCTGTGCTGTATAGGGGCCCTATATCCACAAGAAAGGAAACAGCGTTCCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
||
| CDS-3UTR CAA 90 bp | TGGACTAAAAATACCCACCGCCACCAAAGGAACGCTGTTTCCTTTCTTGTGGATGCTTCTGCTTTAGCTTaGAGTTCTAACGGAGTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: WTKNTHRHQRNAVSFLVDASALA*SSNGVR Trigger: CCTAACTCCGTTAGAACTCAAAGCTAAAGCAGAAGC...ATCCACAAGAAAGGAAACAGCGTTCCTTTGGTGGCGGTGGGTATTTTTAGTCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
||
| CDS-3UTR CAA 90 bp | TGTACAATTAGCTCTCCCCAGAATCTAATCAAGTGTAACCTTGTGCTGGCATTCCACTACTGGAAGTTCTaGTCCGAAGTTTCACAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: CTISSPQNLIKCNLVLAFHYWKF*SEVSQS Trigger: GCTCTGTGAAACTTCGGACAAGAACTTCCAGTAGTG...GAATGCCAGCACAAGGTTACACTTGATTAGATTCTGGGGAGAGCTAATTGTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
||
| CDS-3UTR CAA 90 bp | CATAAGAATATAACAATATGGCTGGTGTTTACATATTCCACATGTGCTGCGGTGTTGGAGCTGGACCTTTaGCAGGAGGAGGTGGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: HKNITIWLVFTYSTCAAVLELDL*QEEVVS Trigger: AGAAACCACCTCCTCCTGCAAAAGGTCCAGCTCCAA...CACCGCAGCACATGTGGAATATGTAAACACCAGCCATATTGTTATATTCTTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
||
| CDS-3UTR CAA 90 bp | CATAAGAATATAACAATATGGCTGGTGTTTACATATTCCACATGTGCTGCGGTGCTTTTTGGGCGGGACTaGAGGAGCAGCTGGTTTAGA | + |
|
Preference number: 5 (lower is better) Translates to: HKNITIWLVFTYSTCAAVLFGRD*RSSWFR Trigger: TCTAAACCAGCTGCTCCTCAAGTCCCGCCCAAAAAG...CACCGCAGCACATGTGGAATATGTAAACACCAGCCATATTGTTATATTCTTATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
||
| CDS-3UTR CAA 90 bp | TATGGCTGGTGTTTACATATTCCACATGTGCTGCGGTGTCTAGGCACAAATAAGGTTCAGGATCTAGCTTaGGTTTTGATACTGGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: YGWCLHIPHVLRCLGTNKVQDLA*VLILAQ Trigger: CTGAGCCAGTATCAAAACCAAAGCTAGATCCTGAAC...CTTATTTGTGCCTAGACACCGCAGCACATGTGGAATATGTAAACACCAGCCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
||
| CDS-3UTR CAA 90 bp | TATGGCTGGTGTTTACATATTCCACATGTGCTGCGGTGTCTAGGCACAAATAAGGCTTCTGCTTTAGCTTaGAGTTCTAACGGAGTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: YGWCLHIPHVLRCLGTNKASALA*SSNGVR Trigger: CCTAACTCCGTTAGAACTCAAAGCTAAAGCAGAAGC...CTTATTTGTGCCTAGACACCGCAGCACATGTGGAATATGTAAACACCAGCCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
||
| CDS-3UTR CAA 90 bp | TATGGCTGGTGTTTACATATTCCACATGTGCTGCGGTGTCTAGGCACAAATAAGTTCGCTGTACAAGACTaGCTACATTTCCTTGCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: YGWCLHIPHVLRCLGTNKFAVQD*LHFLAF Trigger: AAAGGCAAGGAAATGTAGCAAGTCTTGTACAGCGAA...CTTATTTGTGCCTAGACACCGCAGCACATGTGGAATATGTAAACACCAGCCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
||
| CDS-3UTR CAA 90 bp | TGGACTAAAAATACCCACCGCCACCAAAGGAACGCTGTTTCCTTTCTTGTGGATTTGAAAGAGATGACTTaGAAGAGTAGCTTGCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: WTKNTHRHQRNAVSFLVDLKEMT*KSSLHP Trigger: AGGATGCAAGCTACTCTTCAAAGTCATCTCTTTCAA...ATCCACAAGAAAGGAAACAGCGTTCCTTTGGTGGCGGTGGGTATTTTTAGTCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
||
| CDS TCA 90 bp | GCTTTAATCTTGCCATCAACGTCTGGTTTTGTTACCTCCACATTCTaGGTTCTAGATCCCAGAGGCTGTAGGATTAAAGGCTTTTCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: ALILPSTSGFVTSTF*VLDPRGCRIKGFSV Trigger: AACAGAAAAGCCTTTAATCCTACAGCCTCTGGGATCTAGAACTCAGAATGTGGAGGTAACAAAACCAGACGTTGATGGCAAGATTAAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
||
| CDS GCA 90 bp | CCACCTCTAGATTACTTCGCATGGCCTTCTCTTCTTCTAATTCTTTaGGTAGCTTTTCCAGTTCTTTCCCATGATCCTTTTTCAGTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: PPLDYFAWPSLLLIL*VAFPVLSHDPFSVH Trigger: ATGCACTGAAAAAGGATCATGGGAAAGAACTGGAAAAGCTACGCAAAGAATTAGAAGAAGAGAAGGCCATGCGAAGTAATCTAGAGGTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
||
| CDS-3UTR CAA 90 bp | TATGGCTGGTGTTTACATATTCCACATGTGCTGCGGTGTCTAGGCACAAATAAGATTTCCTTAACAAAATaGTCAGGGAACATCCCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: YGWCLHIPHVLRCLGTNKISLTK*SGNIPR Trigger: ACGAGGGATGTTCCCTGACAATTTTGTTAAGGAAAT...CTTATTTGTGCCTAGACACCGCAGCACATGTGGAATATGTAAACACCAGCCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
||
| CDS-3UTR CAA 90 bp | AGAGGCAGGGAAACCGGAAGTTTAAGACAATTTTGCTATATCACAAGGTTAAGTAACAGTCCCAACTTATaGTTCAGGGTTCCACTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: RGRETGSLRQFCYITRLSNSPNL*FRVPLH Trigger: GTGGAGTGGAACCCTGAACAATAAGTTGGGACTGTT...ACTTAACCTTGTGATATAGCAAAATTGTCTTAAACTTCCGGTTTCCCTGCCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGGTGTAGTGTATGTATACAAGTTCATGCCCTATGCAGTACAGGAGGAGGTGGTTTCTTaGGTTTTGGAAAGTCTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: VCVCGVVYVYKFMPYAVQEEVVS*VLESLY Trigger: ATAAAGACTTTCCAAAACCAAAGAAACCACCTCCTC...CTGTACTGCATAGGGCATGAACTTGTATACATACACTACACCACACACACACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGGTGTAGTGTATGTATACAAGTTCATGCCCTATGCAGTACAGTCCAAAGGCTTTAGGTaGCCACTATCATCTTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: VCVCGVVYVYKFMPYAVQSKGFR*PLSSSF Trigger: AAAAGAAGATGATAGTGGCAACCTAAAGCCTTTGGA...CTGTACTGCATAGGGCATGAACTTGTATACATACACTACACCACACACACACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGGTGTAGTGTATGTATACAAGTTCATGCCCTATGCAGTACAGTTGAAAGAGATGACTTaGAAGAGTAGCTTGCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: VCVCGVVYVYKFMPYAVQLKEMT*KSSLHP Trigger: AGGATGCAAGCTACTCTTCAAAGTCATCTCTTTCAA...CTGTACTGCATAGGGCATGAACTTGTATACATACACTACACCACACACACACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGGTGTAGTGTATGTATACAAGTTCATGCCCTATGCAGTACAGAAGCACTTGAAGGTGTaGAAAGAGATGACTTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VCVCGVVYVYKFMPYAVQKHLKV*KEMTLK Trigger: CTTCAAAGTCATCTCTTTCAACACCTTCAAGTGCTT...CTGTACTGCATAGGGCATGAACTTGTATACATACACTACACCACACACACACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
||
| CDS CCA 90 bp | CAGCTTTCTTCAGCTTTGCTATTTCCACCTCTAGATTACTTCGCATaGCCTTCTCTTCTTCTAATTCTTTGCGTAGCTTTTCCAGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: QLSSALLFPPLDYFA*PSLLLILCVAFPVL Trigger: AAGAACTGGAAAAGCTACGCAAAGAATTAGAAGAAGAGAAGGCCATGCGAAGTAATCTAGAGGTGGAAATAGCAAAGCTGAAGAAAGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
||
| CDS-3UTR CAA 90 bp | TGTGTATGTTACTTTTTACTGTTATTAGACCTTTCCCTCCCAGCAGTGTGGGTGGAGGAGGTGGTTTCTTaGGTTTTGGAAAGTCTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: CVCYFLLLLDLSLPAVWVEEVVS*VLESLY Trigger: ATAAAGACTTTCCAAAACCAAAGAAACCACCTCCTC...CACCCACACTGCTGGGAGGGAAAGGTCTAATAACAGTAAAAAGTAACATACACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
||
| CDS-3UTR CAA 90 bp | AAATCTACAGAGCACTTCGGAAGGTATTTCTTGTCTGTGATCACAGTTAGGAGTCAGCTTTCTTCAGCTTaGCTATTTCCACCTCTAGAT | + |
|
Preference number: 5 (lower is better) Translates to: KSTEHFGRYFLSVITVRSQLSSA*LFPPLD Trigger: ATCTAGAGGTGGAAATAGCAAAGCTGAAGAAAGCTG...ACTCCTAACTGTGATCACAGACAAGAAATACCTTCCGAAGTGCTCTGTAGATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
||
| CDS-3UTR CAA 90 bp | AGAGGCAGGGAAACCGGAAGTTTAAGACAATTTTGCTATATCACAAGGTTAAGTCATCATCTGTTTCTTTaGAGTTCCTGGCTACAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RGRETGSLRQFCYITRLSHHLFL*SSWLQR Trigger: CCTTTGTAGCCAGGAACTCAAAAGAAACAGATGATG...ACTTAACCTTGTGATATAGCAAAATTGTCTTAAACTTCCGGTTTCCCTGCCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
||
| CDS-3UTR CAA 90 bp | CATAAGAATATAACAATATGGCTGGTGTTTACATATTCCACATGTGCTGCGGTGCATCATCTGTTTCTTTaGAGTTCCTGGCTACAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: HKNITIWLVFTYSTCAAVHHLFL*SSWLQR Trigger: CCTTTGTAGCCAGGAACTCAAAAGAAACAGATGATG...CACCGCAGCACATGTGGAATATGTAAACACCAGCCATATTGTTATATTCTTATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
||
| CDS-3UTR CAA 90 bp | AGGGAAACCGGAAGTTTAAGACAATTTTGCTATATCACAAGGTTAAGTCCAGCCTCCAAAGGCTTTAGGTaGCCACTATCATCTTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: RETGSLRQFCYITRLSPASKGFR*PLSSSF Trigger: AAAAGAAGATGATAGTGGCAACCTAAAGCCTTTGGA...GGCTGGACTTAACCTTGTGATATAGCAAAATTGTCTTAAACTTCCGGTTTCCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
||
| CDS-3UTR CAA 90 bp | CATAAGAATATAACAATATGGCTGGTGTTTACATATTCCACATGTGCTGCGGTGCAGCTTTCTTCAGCTTaGCTATTTCCACCTCTAGAT | + |
|
Preference number: 5 (lower is better) Translates to: HKNITIWLVFTYSTCAAVQLSSA*LFPPLD Trigger: ATCTAGAGGTGGAAATAGCAAAGCTGAAGAAAGCTG...CACCGCAGCACATGTGGAATATGTAAACACCAGCCATATTGTTATATTCTTATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
||
| CDS-3UTR CAA 90 bp | CATAAGAATATAACAATATGGCTGGTGTTTACATATTCCACATGTGCTGCGGTGGATCTAGCTTTGGTTTaGATACTGGCTCAGTATCAA | + |
|
Preference number: 5 (lower is better) Translates to: HKNITIWLVFTYSTCAAVDLALV*ILAQYQ Trigger: TTGATACTGAGCCAGTATCAAAACCAAAGCTAGATC...CACCGCAGCACATGTGGAATATGTAAACACCAGCCATATTGTTATATTCTTATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
||
| CDS-3UTR CAA 90 bp | AGAGGCAGGGAAACCGGAAGTTTAAGACAATTTTGCTATATCACAAGGTTAAGTAAGCACTTGAAGGTGTaGAAAGAGATGACTTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RGRETGSLRQFCYITRLSKHLKV*KEMTLK Trigger: CTTCAAAGTCATCTCTTTCAACACCTTCAAGTGCTT...ACTTAACCTTGTGATATAGCAAAATTGTCTTAAACTTCCGGTTTCCCTGCCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
||
| CDS TCA 90 bp | GGTGGTTTCTTTGGTTTTGGAAAGTCTTTATCTAGTTCACTTATCTaGACAGCAAAGTTATCTGGAAACACTCCTTCTTTACCGTTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: GGFFGFGKSLSSSLI*TAKLSGNTPSLPFS Trigger: ACTGAACGGTAAAGAAGGAGTGTTTCCAGATAACTTTGCTGTTCAGATAAGTGAACTAGATAAAGACTTTCCAAAACCAAAGAAACCACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
||
| CDS CCA 72 bp | TTTGGCTGCTGGAGGTGGCGGAGGGACTGGCTTTTCTaGCCGCTTTGGGTACACTGCTCCAGGCGACCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: FGCWRWRRDWLF*PLWVHCSRRPQ Trigger: CTGAGGTCGCCTGGAGCAGTGTACCCAAAGCGGCCAGAAAAGCCAGTCCCTCCGCCACCTCCAGCAGCCAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
||
| CDS CAA 90 bp | TTTTGGCTGCTGGAGGTGGCGGAGGGACTGGCTTTTCTGGCCGCTTaGGGTACACTGCTCCAGGCGACCTCAGTAAGTTACTGGCTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: FWLLEVAEGLAFLAA*GTLLQATSVSYWLW Trigger: CCAAAGCCAGTAACTTACTGAGGTCGCCTGGAGCAGTGTACCCAAAGCGGCCAGAAAAGCCAGTCCCTCCGCCACCTCCAGCAGCCAAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
||
| CDS CCA 72 bp | CTGCTCCAGGCGACCTCAGTAAGTTACTGGCTTTGGTaGGTGCAGTGGGCTTTTTGGGCGGGACTTGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LLQATSVSYWLW*VQWAFWAGLEE Trigger: CTCCTCAAGTCCCGCCCAAAAAGCCCACTGCACCCACCAAAGCCAGTAACTTACTGAGGTCGCCTGGAGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
||
| CDS CCA 72 bp | ACACTGCTCCAGGCGACCTCAGTAAGTTACTGGCTTTaGTGGGTGCAGTGGGCTTTTTGGGCGGGACTTGAG | + |
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Preference number: 6 (lower is better) Translates to: TLLQATSVSYWL*WVQWAFWAGLE Trigger: CTCAAGTCCCGCCCAAAAAGCCCACTGCACCCACCAAAGCCAGTAACTTACTGAGGTCGCCTGGAGCAGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
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| CDS CCA 72 bp | TTGGGTACACTGCTCCAGGCGACCTCAGTAAGTTACTaGCTTTGGTGGGTGCAGTGGGCTTTTTGGGCGGGA | + |
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Preference number: 6 (lower is better) Translates to: LGTLLQATSVSY*LWWVQWAFWAG Trigger: TCCCGCCCAAAAAGCCCACTGCACCCACCAAAGCCAGTAACTTACTGAGGTCGCCTGGAGCAGTGTACCCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
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| CDS TCA 72 bp | GCTTTGGTGGGTGCAGTGGGCTTTTTGGGCGGGACTTaGGGAGCAGCTGGTTTAGAAGGTTTCTGTTCTAAC | + |
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Preference number: 6 (lower is better) Translates to: ALVGAVGFLGGT*GAAGLEGFCSN Trigger: GTTAGAACAGAAACCTTCTAAACCAGCTGCTCCTCAAGTCCCGCCCAAAAAGCCCACTGCACCCACCAAAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
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| CDS TCA 72 bp | GTGGCTGAATTCCTCCAGCTGGAAGTCCATAAGTGCTaGTTCGCTGTACAAGACTTGCTACATTTCCTTGCC | + |
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Preference number: 6 (lower is better) Translates to: VAEFLQLEVHKC*FAVQDLLHFLA Trigger: GGCAAGGAAATGTAGCAAGTCTTGTACAGCGAATCAGCACTTATGGACTTCCAGCTGGAGGAATTCAGCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
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| CDS CCA 72 bp | AGCTTTGGTTTGTGGATGTGGCTGAATTCCTCCAGCTaGAAGTCCATAAGTGCTGATTCGCTGTACAAGACT | + |
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Preference number: 6 (lower is better) Translates to: SFGLWMWLNSSS*KSISADSLYKT Trigger: AGTCTTGTACAGCGAATCAGCACTTATGGACTTCCAGCTGGAGGAATTCAGCCACATCCACAAACCAAAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
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| CDS TCA 72 bp | GTACAAGACTTGCTACATTTCCTTGCCTTTCCCGTTTaGTGGGCAAATTGTCATCCTTGGGTTCTGTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: VQDLLHFLAFPV*WANCHPWVLSL Trigger: GAGAGACAGAACCCAAGGATGACAATTTGCCCATCAAACGGGAAAGGCAAGGAAATGTAGCAAGTCTTGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
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| CDS GCA 72 bp | TGGAAGTCCATAAGTGCTGATTCGCTGTACAAGACTTaGTACATTTCCTTGCCTTTCCCGTTTGATGGGCAA | + |
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Preference number: 6 (lower is better) Translates to: WKSISADSLYKT*YISLPFPFDGQ Trigger: TTGCCCATCAAACGGGAAAGGCAAGGAAATGTAGCAAGTCTTGTACAGCGAATCAGCACTTATGGACTTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
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| CDS CAA 72 bp | GACATCCCCCACGATCAATTCCAGTTCGTCCTCATTTaGTGGAGAGTAGTCAAAAAGAACTTTACACTGACG | + |
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Preference number: 6 (lower is better) Translates to: DIPHDQFQFVLI*WRVVKKNFTLT Trigger: CGTCAGTGTAAAGTTCTTTTTGACTACTCTCCACAAAATGAGGACGAACTGGAATTGATCGTGGGGGATGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
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| CDS CAA 72 bp | CCTTGCCTTTCCCGTTTGATGGGCAAATTGTCATCCTaGGGTTCTGTCTCTCGCTTAATTTCCTTAACAAAA | + |
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Preference number: 6 (lower is better) Translates to: PCLSRLMGKLSS*GSVSRLISLTK Trigger: TTTTGTTAAGGAAATTAAGCGAGAGACAGAACCCAAGGATGACAATTTGCCCATCAAACGGGAAAGGCAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024709.9 |
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| CDS CCA 72 bp | ACAATATTCCTTAGCTTTAATCTTGCCATCAACGTCTaGTTTTGTTACCTCCACATTCTGAGTTCTAGATCC | + |
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Preference number: 6 (lower is better) Translates to: TIFLSFNLAINV*FCYLHILSSRS Trigger: GGATCTAGAACTCAGAATGTGGAGGTAACAAAACCAGACGTTGATGGCAAGATTAAAGCTAAGGAATATTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
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| CDS CAA 72 bp | GAATTTCTTTTCCCATCATCTGCTTCTGCTTTAGCTTaGAGTTCTAACGGAGTTAGGAAAGCAGCTGTATTT | + |
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Preference number: 6 (lower is better) Translates to: EFLFPSSASALA*SSNGVRKAAVF Trigger: AAATACAGCTGCTTTCCTAACTCCGTTAGAACTCAAAGCTAAAGCAGAAGCAGATGATGGGAAAAGAAATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
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| CDS CAA 72 bp | GGAAATAATGTTCTACAATATTCCTTAGCTTTAATCTaGCCATCAACGTCTGGTTTTGTTACCTCCACATTC | + |
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Preference number: 6 (lower is better) Translates to: GNNVLQYSLALI*PSTSGFVTSTF Trigger: GAATGTGGAGGTAACAAAACCAGACGTTGATGGCAAGATTAAAGCTAAGGAATATTGTAGAACATTATTTCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024709.9 ENSMUST00000233476.2 |
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