Pregenerated sensors for CD276 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035914Ensembl transcript IDs: ENSMUST00000039788.11, ENSMUST00000165365.3, ENSMUST00000213722.2, ENSMUST00000216629.2
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGTACTGGGGTGGGAGAGAGGCCTTCAGGAGGACATCAGAAGTTCTaGCAGAAGCCAGGGCAGTCAGAGACAAGCCAGGTATATATCCCA | + |
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Preference number: 1 (lower is better) Translates to: GTGVGERPSGGHQKF*QKPGQSETSQVYIP Trigger: TGGGATATATACCTGGCTTGTCTCTGACTGCCCTGGCTTCTGGCAGAACTTCTGATGTCCTCCTGAAGGCCTCTCTCCCACCCCAGTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| 3UTR CCA 90 bp | GCACAGGATGCCCCTTGGAGAATAATAGCAGTTACACAGTCTGCATaGCTTTGGAGGAGCAAGGGTGTGGGGGTGGTGCGTGTGTGTCCA | + |
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Preference number: 1 (lower is better) Translates to: AQDAPWRIIAVTQSA*LWRSKGVGVVRVCP Trigger: TGGACACACACGCACCACCCCCACACCCTTGCTCCTCCAAAGCCATGCAGACTGTGTAACTGCTATTATTCTCCAAGGGGCATCCTGTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| 3UTR GCA 90 bp | ATCTGCACAGGATGCCCCTTGGAGAATAATAGCAGTTACACAGTCTaGATGGCTTTGGAGGAGCAAGGGTGTGGGGGTGGTGCGTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: ICTGCPLENNSSYTV*MALEEQGCGGGACV Trigger: CACACACGCACCACCCCCACACCCTTGCTCCTCCAAAGCCATGCAGACTGTGTAACTGCTATTATTCTCCAAGGGGCATCCTGTGCAGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| 3UTR CCA 90 bp | GATGCCCCTTGGAGAATAATAGCAGTTACACAGTCTGCATGGCTTTaGAGGAGCAAGGGTGTGGGGGTGGTGCGTGTGTGTCCATTAGAC | + |
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Preference number: 1 (lower is better) Translates to: DAPWRIIAVTQSAWL*RSKGVGVVRVCPLD Trigger: GTCTAATGGACACACACGCACCACCCCCACACCCTTGCTCCTCCAAAGCCATGCAGACTGTGTAACTGCTATTATTCTCCAAGGGGCATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| 3UTR CCA 90 bp | GAGCTGACGGCCAATAGTTGGGCAGGAAGTCGAAGATGGTACTTCTaGGCAGAGATAGGGACTCTGGGAGAAGAACTGAATCACGGGAGA | + |
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Preference number: 1 (lower is better) Translates to: ELTANSWAGSRRWYF*AEIGTLGEELNHGR Trigger: TCTCCCGTGATTCAGTTCTTCTCCCAGAGTCCCTATCTCTGCCCAGAAGTACCATCTTCGACTTCCTGCCCAACTATTGGCCGTCAGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| 3UTR CCA 90 bp | GAGGGACATCTTTGTGTCGTGTCCGTGGGAAATAAGGCCGCAGGATaGTTCGTGTATCGTGTCACTGGAGAAATGAGGCTGCAGGATGAT | + |
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Preference number: 1 (lower is better) Translates to: EGHLCVVSVGNKAAG*FVYRVTGEMRLQDD Trigger: ATCATCCTGCAGCCTCATTTCTCCAGTGACACGATACACGAACCATCCTGCGGCCTTATTTCCCACGGACACGACACAAAGATGTCCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| 3UTR CCA 90 bp | GAATTACATCTGATCGGCTTTAATGAAGAGCTGACGGCCAATAGTTaGGCAGGAAGTCGAAGATGGTACTTCTGGGCAGAGATAGGGACT | + |
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Preference number: 1 (lower is better) Translates to: ELHLIGFNEELTANS*AGSRRWYFWAEIGT Trigger: AGTCCCTATCTCTGCCCAGAAGTACCATCTTCGACTTCCTGCCCAACTATTGGCCGTCAGCTCTTCATTAAAGCCGATCAGATGTAATTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| 3UTR TCA 90 bp | GAAATAAGGCCGCAGGATGGTTCGTGTATCGTGTCACTGGAGAAATaGGGCTGCAGGATGATGGGAATTAAGTCCATTGGAAAAGTAAGG | + |
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Preference number: 1 (lower is better) Translates to: EIRPQDGSCIVSLEK*GCRMMGIKSIGKVR Trigger: CCTTACTTTTCCAATGGACTTAATTCCCATCATCCTGCAGCCTCATTTCTCCAGTGACACGATACACGAACCATCCTGCGGCCTTATTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| 3UTR CCA 90 bp | CAACAGAGGGCTAAATGCTGGCAGGATCTGGTGCTGTTATTTCTATaGCCCATTGCTGGTCTCATATTTTACAAATACTTGTTTCTTCCT | + |
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Preference number: 1 (lower is better) Translates to: QQRAKCWQDLVLLFL*PIAGLIFYKYLFLP Trigger: AGGAAGAAACAAGTATTTGTAAAATATGAGACCAGCAATGGGCCATAGAAATAACAGCACCAGATCCTGCCAGCATTTAGCCCTCTGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| 3UTR-3UTR TCA 90 bp | AGACATGGAGGTGGATGGAGAGTGGAGCAGAGAGGTAGACCTGGCCATGTGGTGGCCCCTGAGGGGCCCTaGGAACCAGGGAGACAAGAA | + |
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Preference number: 2 (lower is better) Translates to: RHGGGWRVEQRGRPGHVVAPEGP*EPGRQE Trigger: TTCTTGTCTCCCTGGTTCTCAGGGCCCCTCAGGGGC...CACCACATGGCCAGGTCTACCTCTCTGCTCCACTCTCCATCCACCTCCATGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| 3UTR-3UTR CCA 90 bp | AGACATGGAGGTGGATGGAGAGTGGAGCAGAGAGGTAGACCTGGCCATGTGGTGGGAGGAGCAAGGGTGTaGGGGTGGTGCGTGTGTGTC | + |
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Preference number: 2 (lower is better) Translates to: RHGGGWRVEQRGRPGHVVGGARV*GWCVCV Trigger: GACACACACGCACCACCCCCACACCCTTGCTCCTCC...CACCACATGGCCAGGTCTACCTCTCTGCTCCACTCTCCATCCACCTCCATGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| 3UTR-3UTR CCA 90 bp | GACCTGACCCAGGTCTGCACGGCTGTGGCCACCTGCCTTCCAGTCCACATCTATCAGTCTGCATGGCTTTaGAGGAGCAAGGGTGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: DLTQVCTAVATCLPVHIYQSAWL*RSKGVG Trigger: CCCCACACCCTTGCTCCTCCAAAGCCATGCAGACTG...ATAGATGTGGACTGGAAGGCAGGTGGCCACAGCCGTGCAGACCTGGGTCAGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| 3UTR-3UTR CCA 90 bp | GACCTGACCCAGGTCTGCACGGCTGTGGCCACCTGCCTTCCAGTCCACATCTATGAGGTGGATGGAGAGTaGAGCAGAGAGGTAGACCTG | + |
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Preference number: 2 (lower is better) Translates to: DLTQVCTAVATCLPVHIYEVDGE*SREVDL Trigger: CAGGTCTACCTCTCTGCTCCACTCTCCATCCACCTC...ATAGATGTGGACTGGAAGGCAGGTGGCCACAGCCGTGCAGACCTGGGTCAGGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| 3UTR-3UTR TCA 90 bp | GACCTGACCCAGGTCTGCACGGCTGTGGCCACCTGCCTTCCAGTCCACATCTATGTGTCACTGGAGAAATaGGGCTGCAGGATGATGGGA | + |
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Preference number: 2 (lower is better) Translates to: DLTQVCTAVATCLPVHIYVSLEK*GCRMMG Trigger: TCCCATCATCCTGCAGCCTCATTTCTCCAGTGACAC...ATAGATGTGGACTGGAAGGCAGGTGGCCACAGCCGTGCAGACCTGGGTCAGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| 3UTR-3UTR TCA 90 bp | ATGGAGGTGGATGGAGAGTGGAGCAGAGAGGTAGACCTGGCCATGTGGTGGGACGTGTCACTGGAGAAATaGGGCTGCAGGATGATGGGA | + |
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Preference number: 2 (lower is better) Translates to: MEVDGEWSREVDLAMWWDVSLEK*GCRMMG Trigger: TCCCATCATCCTGCAGCCTCATTTCTCCAGTGACAC...GTCCCACCACATGGCCAGGTCTACCTCTCTGCTCCACTCTCCATCCACCTCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| 3UTR-3UTR CCA 90 bp | GACCTGACCCAGGTCTGCACGGCTGTGGCCACCTGCCTTCCAGTCCACATCTATGTTACACAGTCTGCATaGCTTTGGAGGAGCAAGGGT | + |
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Preference number: 2 (lower is better) Translates to: DLTQVCTAVATCLPVHIYVTQSA*LWRSKG Trigger: ACCCTTGCTCCTCCAAAGCCATGCAGACTGTGTAAC...ATAGATGTGGACTGGAAGGCAGGTGGCCACAGCCGTGCAGACCTGGGTCAGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| 3UTR-3UTR CCA 90 bp | ACCCAGGTCTGCACGGCTGTGGCCACCTGCCTTCCAGTCCACATCTATAAAGACTGGCAGACATGGAGGTaGATGGAGAGTGGAGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: TQVCTAVATCLPVHIYKDWQTWR*MESGAE Trigger: CTCTGCTCCACTCTCCATCCACCTCCATGTCTGCCA...GTCTTTATAGATGTGGACTGGAAGGCAGGTGGCCACAGCCGTGCAGACCTGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| 3UTR-3UTR GCA 90 bp | TCTAGCTGGCAGGTCTGTGAAAGTCCCATTGGACCCTGTGGTTGTTATCAGATGGCGGGGGCGGGAGAGTaGCCCATCTCACTTAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: SSWQVCESPIGPCGCYQMAGAGE*PISLSQ Trigger: CTGACTAAGTGAGATGGGGCACTCTCCCGCCCCCGC...CATCTGATAACAACCACAGGGTCCAATGGGACTTTCACAGACCTGCCAGCTAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| 3UTR-3UTR CCA 90 bp | ATGGAGGTGGATGGAGAGTGGAGCAGAGAGGTAGACCTGGCCATGTGGTGGGACGGAAAAGTAAGGCTGTaGGTGGTCTATGGACCACGT | + |
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Preference number: 2 (lower is better) Translates to: MEVDGEWSREVDLAMWWDGKVRL*VVYGPR Trigger: ACGTGGTCCATAGACCACCCACAGCCTTACTTTTCC...GTCCCACCACATGGCCAGGTCTACCTCTCTGCTCCACTCTCCATCCACCTCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| 3UTR-3UTR CCA 90 bp | ACCCAGGTCTGCACGGCTGTGGCCACCTGCCTTCCAGTCCACATCTATAAAGACGACCTGGCCATGTGGTaGGACATAGTGCCAGGATTA | + |
|
Preference number: 2 (lower is better) Translates to: TQVCTAVATCLPVHIYKDDLAMW*DIVPGL Trigger: TAATCCTGGCACTATGTCCCACCACATGGCCAGGTC...GTCTTTATAGATGTGGACTGGAAGGCAGGTGGCCACAGCCGTGCAGACCTGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| 3UTR-3UTR GCA 90 bp | TCGAAGATGGTACTTCTGGGCAGAGATAGGGACTCTGGGAGAAGAACTGAATCAGCGGGGGCGGGAGAGTaGCCCATCTCACTTAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: SKMVLLGRDRDSGRRTESAGAGE*PISLSQ Trigger: CTGACTAAGTGAGATGGGGCACTCTCCCGCCCCCGC...TGATTCAGTTCTTCTCCCAGAGTCCCTATCTCTGCCCAGAAGTACCATCTTCGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| 3UTR-3UTR CCA 90 bp | ACCCAGGTCTGCACGGCTGTGGCCACCTGCCTTCCAGTCCACATCTATAAAGACGTTACACAGTCTGCATaGCTTTGGAGGAGCAAGGGT | + |
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Preference number: 2 (lower is better) Translates to: TQVCTAVATCLPVHIYKDVTQSA*LWRSKG Trigger: ACCCTTGCTCCTCCAAAGCCATGCAGACTGTGTAAC...GTCTTTATAGATGTGGACTGGAAGGCAGGTGGCCACAGCCGTGCAGACCTGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| 3UTR CAA 90 bp | GGATGCCCCTTGGAGAATAATAGCAGTTACACAGTCTGCATGGCTTaGGAGGAGCAAGGGTGTGGGGGTGGTGCGTGTGTGTCCATTAGA | + |
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Preference number: 2 (lower is better) Translates to: GCPLENNSSYTVCMA*EEQGCGGGACVSIR Trigger: TCTAATGGACACACACGCACCACCCCCACACCCTTGCTCCTCCAAAGCCATGCAGACTGTGTAACTGCTATTATTCTCCAAGGGGCATCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| 3UTR-3UTR CCA 90 bp | AATGAAGAGCTGACGGCCAATAGTTGGGCAGGAAGTCGAAGATGGTACTTCTGGCAGTCTGCATGGCTTTaGAGGAGCAAGGGTGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: NEELTANSWAGSRRWYFWQSAWL*RSKGVG Trigger: CCCCACACCCTTGCTCCTCCAAAGCCATGCAGACTG...CCAGAAGTACCATCTTCGACTTCCTGCCCAACTATTGGCCGTCAGCTCTTCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| 3UTR-3UTR GCA 90 bp | TCGAAGATGGTACTTCTGGGCAGAGATAGGGACTCTGGGAGAAGAACTGAATCAGCAGCCAGGAGACCATaGAAGGCAAGTATGTGCGTG | + |
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Preference number: 2 (lower is better) Translates to: SKMVLLGRDRDSGRRTESAARRP*KASMCV Trigger: CACGCACATACTTGCCTTGCATGGTCTCCTGGCTGC...TGATTCAGTTCTTCTCCCAGAGTCCCTATCTCTGCCCAGAAGTACCATCTTCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| 3UTR-3UTR CCA 90 bp | AATTATCCTCAGGTTCTCAGGTACTGGGGTGGGAGAGAGGCCTTCAGGAGGACAGATACATCAGGGCCATaGGAGCAAGAACTAAGAGGT | + |
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Preference number: 2 (lower is better) Translates to: NYPQVLRYWGGREAFRRTDTSGP*EQELRG Trigger: ACCTCTTAGTTCTTGCTCCCATGGCCCTGATGTATC...TGTCCTCCTGAAGGCCTCTCTCCCACCCCAGTACCTGAGAACCTGAGGATAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| 3UTR-3UTR CCA 90 bp | TCGAAGATGGTACTTCTGGGCAGAGATAGGGACTCTGGGAGAAGAACTGAATCAGACCTGGCCATGTGGTaGGACATAGTGCCAGGATTA | + |
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Preference number: 2 (lower is better) Translates to: SKMVLLGRDRDSGRRTESDLAMW*DIVPGL Trigger: TAATCCTGGCACTATGTCCCACCACATGGCCAGGTC...TGATTCAGTTCTTCTCCCAGAGTCCCTATCTCTGCCCAGAAGTACCATCTTCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| 3UTR-3UTR CCA 90 bp | TTCTGGGCAGAGATAGGGACTCTGGGAGAAGAACTGAATCACGGGAGATTTGCTGATACATCAGGGCCATaGGAGCAAGAACTAAGAGGT | + |
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Preference number: 2 (lower is better) Translates to: FWAEIGTLGEELNHGRFADTSGP*EQELRG Trigger: ACCTCTTAGTTCTTGCTCCCATGGCCCTGATGTATC...AGCAAATCTCCCGTGATTCAGTTCTTCTCCCAGAGTCCCTATCTCTGCCCAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| 3UTR-3UTR CCA 90 bp | CTCCAGAATAGCACCATGGTAAGAAGGCCTTTCTTGTCCTCAGGCCCTCTTCATGCAGGAAGTCGAAGATaGTACTTCTGGGCAGAGATA | + |
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Preference number: 2 (lower is better) Translates to: LQNSTMVRRPFLSSGPLHAGSRR*YFWAEI Trigger: TATCTCTGCCCAGAAGTACCATCTTCGACTTCCTGC...ATGAAGAGGGCCTGAGGACAAGAAAGGCCTTCTTACCATGGTGCTATTCTGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| 3UTR CAA 90 bp | GTCTTCAGGGAAATAAAGCAGGGTTTCATCTGCACAGGATGCCCCTaGGAGAATAATAGCAGTTACACAGTCTGCATGGCTTTGGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: VFREIKQGFICTGCP*ENNSSYTVCMALEE Trigger: CTCCTCCAAAGCCATGCAGACTGTGTAACTGCTATTATTCTCCAAGGGGCATCCTGTGCAGATGAAACCCTGCTTTATTTCCCTGAAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| 3UTR-3UTR CCA 90 bp | AAGCAGGGTTTCATCTGCACAGGATGCCCCTTGGAGAATAATAGCAGTTACACAGGAAAAGTAAGGCTGTaGGTGGTCTATGGACCACGT | + |
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Preference number: 2 (lower is better) Translates to: KQGFICTGCPLENNSSYTGKVRL*VVYGPR Trigger: ACGTGGTCCATAGACCACCCACAGCCTTACTTTTCC...TGTGTAACTGCTATTATTCTCCAAGGGGCATCCTGTGCAGATGAAACCCTGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| 3UTR-3UTR CCA 90 bp | AGTAGGTCTCTGTATATTCAATTGTTAATTTTGTACCAACAGAGGGCTAAATGCGGAGGAGCAAGGGTGTaGGGGTGGTGCGTGTGTGTC | + |
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Preference number: 2 (lower is better) Translates to: SRSLYIQLLILYQQRAKCGGARV*GWCVCV Trigger: GACACACACGCACCACCCCCACACCCTTGCTCCTCC...GCATTTAGCCCTCTGTTGGTACAAAATTAACAATTGAATATACAGAGACCTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| 3UTR CAA 90 bp | GGGCTAAATGCTGGCAGGATCTGGTGCTGTTATTTCTATGGCCCATaGCTGGTCTCATATTTTACAAATACTTGTTTCTTCCTCACCTGC | + |
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Preference number: 2 (lower is better) Translates to: GLNAGRIWCCYFYGP*LVSYFTNTCFFLTC Trigger: GCAGGTGAGGAAGAAACAAGTATTTGTAAAATATGAGACCAGCAATGGGCCATAGAAATAACAGCACCAGATCCTGCCAGCATTTAGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| 3UTR-3UTR CCA 90 bp | GGCCCATTGCTGGTCTCATATTTTACAAATACTTGTTTCTTCCTCACCTGCCTAGCAGGAAGTCGAAGATaGTACTTCTGGGCAGAGATA | + |
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Preference number: 2 (lower is better) Translates to: GPLLVSYFTNTCFFLTCLAGSRR*YFWAEI Trigger: TATCTCTGCCCAGAAGTACCATCTTCGACTTCCTGC...TAGGCAGGTGAGGAAGAAACAAGTATTTGTAAAATATGAGACCAGCAATGGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| 3UTR-3UTR GCA 90 bp | AGTAGGTCTCTGTATATTCAATTGTTAATTTTGTACCAACAGAGGGCTAAATGCGCAGCCAGGAGACCATaGAAGGCAAGTATGTGCGTG | + |
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Preference number: 2 (lower is better) Translates to: SRSLYIQLLILYQQRAKCAARRP*KASMCV Trigger: CACGCACATACTTGCCTTGCATGGTCTCCTGGCTGC...GCATTTAGCCCTCTGTTGGTACAAAATTAACAATTGAATATACAGAGACCTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| 3UTR-3UTR CCA 90 bp | AGGTCTCTGTATATTCAATTGTTAATTTTGTACCAACAGAGGGCTAAATGCTGGGAACGGGTAGATCTGTaGGACAAACCCATTCGTTGG | + |
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Preference number: 2 (lower is better) Translates to: RSLYIQLLILYQQRAKCWERVDL*DKPIRW Trigger: CCAACGAATGGGTTTGTCCCACAGATCTACCCGTTC...CCAGCATTTAGCCCTCTGTTGGTACAAAATTAACAATTGAATATACAGAGACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| 3UTR-3UTR CCA 90 bp | AGTAGGTCTCTGTATATTCAATTGTTAATTTTGTACCAACAGAGGGCTAAATGCCGAAGATGGTACTTCTaGGCAGAGATAGGGACTCTG | + |
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Preference number: 2 (lower is better) Translates to: SRSLYIQLLILYQQRAKCRRWYF*AEIGTL Trigger: CAGAGTCCCTATCTCTGCCCAGAAGTACCATCTTCG...GCATTTAGCCCTCTGTTGGTACAAAATTAACAATTGAATATACAGAGACCTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| 3UTR TCA 72 bp | CCAGGGCCAGATCAGATCAGGGCAGGGAGGTCAGGATaGAGCCTTGCTGAGCGATGGGATCCCACCCTCAGA | + |
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Preference number: 3 (lower is better) Translates to: PGPDQIRAGRSG*SLAERWDPTLR Trigger: TCTGAGGGTGGGATCCCATCGCTCAGCAAGGCTTCATCCTGACCTCCCTGCCCTGATCTGATCTGGCCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| 3UTR GCA 72 bp | CCCAGGGCAGCCAGGAGACCATGCAAGGCAAGTATGTaGGTGATCCAGCACGCACAGCTGCAGGTAGGTATC | + |
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Preference number: 3 (lower is better) Translates to: PRAARRPCKASM*VIQHAQLQVGI Trigger: GATACCTACCTGCAGCTGTGCGTGCTGGATCACGCACATACTTGCCTTGCATGGTCTCCTGGCTGCCCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| 3UTR GCA 72 bp | GTGGGAGAGAGGCCTTCAGGAGGACATCAGAAGTTCTaGCAGAAGCCAGGGCAGTCAGAGACAAGCCAGGTA | + |
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Preference number: 3 (lower is better) Translates to: VGERPSGGHQKF*QKPGQSETSQV Trigger: TACCTGGCTTGTCTCTGACTGCCCTGGCTTCTGGCAGAACTTCTGATGTCCTCCTGAAGGCCTCTCTCCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| 3UTR GCA 72 bp | GAAAATACCCAGTTCTCCAGGTACGGCAAGGGGCCATaGTTTCTCCATGTTTCTGGCTCTACCCTGGGCCCT | + |
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Preference number: 3 (lower is better) Translates to: ENTQFSRYGKGP*FLHVSGSTLGP Trigger: AGGGCCCAGGGTAGAGCCAGAAACATGGAGAAAGCATGGCCCCTTGCCGTACCTGGAGAACTGGGTATTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| 3UTR-3UTR CAA 90 bp | ATGGAGGTGGATGGAGAGTGGAGCAGAGAGGTAGACCTGGCCATGTGGTGGGACTCTGTGAAAGTCCCATaGGACCCTGTGGTTGTTATC | + |
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Preference number: 3 (lower is better) Translates to: MEVDGEWSREVDLAMWWDSVKVP*DPVVVI Trigger: GATAACAACCACAGGGTCCAATGGGACTTTCACAGA...GTCCCACCACATGGCCAGGTCTACCTCTCTGCTCCACTCTCCATCCACCTCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| 3UTR CCA 72 bp | CTTTGTGTCGTGTCCGTGGGAAATAAGGCCGCAGGATaGTTCGTGTATCGTGTCACTGGAGAAATGAGGCTG | + |
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Preference number: 3 (lower is better) Translates to: LCVVSVGNKAAG*FVYRVTGEMRL Trigger: CAGCCTCATTTCTCCAGTGACACGATACACGAACCATCCTGCGGCCTTATTTCCCACGGACACGACACAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| 3UTR CCA 72 bp | TGGAGAATAATAGCAGTTACACAGTCTGCATGGCTTTaGAGGAGCAAGGGTGTGGGGGTGGTGCGTGTGTGT | + |
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Preference number: 3 (lower is better) Translates to: WRIIAVTQSAWL*RSKGVGVVRVC Trigger: ACACACACGCACCACCCCCACACCCTTGCTCCTCCAAAGCCATGCAGACTGTGTAACTGCTATTATTCTCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| 3UTR CCA 72 bp | GATGGAGAGTGGAGCAGAGAGGTAGACCTGGCCATGTaGTGGGACATAGTGCCAGGATTAGTCAGGATAGAA | + |
|
Preference number: 3 (lower is better) Translates to: DGEWSREVDLAM*WDIVPGLVRIE Trigger: TTCTATCCTGACTAATCCTGGCACTATGTCCCACCACATGGCCAGGTCTACCTCTCTGCTCCACTCTCCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
||
| 3UTR-3UTR CAA 90 bp | AGCCAGGGCAGTCAGAGACAAGCCAGGTATATATCCCAGCTCCAGAATAGCACCCAGGGAGACAAGAACTaGCTTCCTATGGAAGAACAG | + |
|
Preference number: 3 (lower is better) Translates to: SQGSQRQARYISQLQNSTQGDKN*LPMEEQ Trigger: CTGTTCTTCCATAGGAAGCAAGTTCTTGTCTCCCTG...GGTGCTATTCTGGAGCTGGGATATATACCTGGCTTGTCTCTGACTGCCCTGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
||
| 3UTR-3UTR CAA 90 bp | GACCTGACCCAGGTCTGCACGGCTGTGGCCACCTGCCTTCCAGTCCACATCTATTATTTCTATGGCCCATaGCTGGTCTCATATTTTACA | + |
|
Preference number: 3 (lower is better) Translates to: DLTQVCTAVATCLPVHIYYFYGP*LVSYFT Trigger: TGTAAAATATGAGACCAGCAATGGGCCATAGAAATA...ATAGATGTGGACTGGAAGGCAGGTGGCCACAGCCGTGCAGACCTGGGTCAGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
||
| 3UTR-3UTR CAA 90 bp | CTGTGTAGCCCCAGATGTCCTGGAACTCACTCGATAGACCAGGCTGAGTCAAAAGTAAGAAGGCCTTTCTaGTCCTCAGGCCCTCTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: LCSPRCPGTHSIDQAESKVRRPF*SSGPLH Trigger: ATGAAGAGGGCCTGAGGACAAGAAAGGCCTTCTTAC...TTTTGACTCAGCCTGGTCTATCGAGTGAGTTCCAGGACATCTGGGGCTACACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
||
| 3UTR CCA 72 bp | CTGATCGGCTTTAATGAAGAGCTGACGGCCAATAGTTaGGCAGGAAGTCGAAGATGGTACTTCTGGGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LIGFNEELTANS*AGSRRWYFWAE Trigger: CTCTGCCCAGAAGTACCATCTTCGACTTCCTGCCCAACTATTGGCCGTCAGCTCTTCATTAAAGCCGATCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
||
| 3UTR TCA 72 bp | CCGCAGGATGGTTCGTGTATCGTGTCACTGGAGAAATaGGGCTGCAGGATGATGGGAATTAAGTCCATTGGA | + |
|
Preference number: 3 (lower is better) Translates to: PQDGSCIVSLEK*GCRMMGIKSIG Trigger: TCCAATGGACTTAATTCCCATCATCCTGCAGCCTCATTTCTCCAGTGACACGATACACGAACCATCCTGCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
||
| 3UTR CCA 72 bp | GCCAATAGTTGGGCAGGAAGTCGAAGATGGTACTTCTaGGCAGAGATAGGGACTCTGGGAGAAGAACTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: ANSWAGSRRWYF*AEIGTLGEELN Trigger: ATTCAGTTCTTCTCCCAGAGTCCCTATCTCTGCCCAGAAGTACCATCTTCGACTTCCTGCCCAACTATTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
||
| 3UTR CCA 72 bp | GTCCCATGTTTAAATTATCCTCAGGTTCTCAGGTACTaGGGTGGGAGAGAGGCCTTCAGGAGGACATCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: VPCLNYPQVLRY*GGREAFRRTSE Trigger: TTCTGATGTCCTCCTGAAGGCCTCTCTCCCACCCCAGTACCTGAGAACCTGAGGATAATTTAAACATGGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
||
| 3UTR-3UTR CAA 90 bp | ACCCAGGTCTGCACGGCTGTGGCCACCTGCCTTCCAGTCCACATCTATAAAGACCATTGGACCCTGTGGTaGTTATCAGATGTTAATTTA | + |
|
Preference number: 3 (lower is better) Translates to: TQVCTAVATCLPVHIYKDHWTLW*LSDVNL Trigger: TAAATTAACATCTGATAACAACCACAGGGTCCAATG...GTCTTTATAGATGTGGACTGGAAGGCAGGTGGCCACAGCCGTGCAGACCTGGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
||
| 3UTR GCA 72 bp | TGTACCAACAGAGGGCTAAATGCTGGCAGGATCTGGTaGTGTTATTTCTATGGCCCATTGCTGGTCTCATAT | + |
|
Preference number: 3 (lower is better) Translates to: CTNRGLNAGRIW*CYFYGPLLVSY Trigger: ATATGAGACCAGCAATGGGCCATAGAAATAACAGCACCAGATCCTGCCAGCATTTAGCCCTCTGTTGGTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
||
| 3UTR CCA 72 bp | TTTTGTACCAACAGAGGGCTAAATGCTGGCAGGATCTaGTGCTGTTATTTCTATGGCCCATTGCTGGTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: FCTNRGLNAGRI*CCYFYGPLLVS Trigger: TGAGACCAGCAATGGGCCATAGAAATAACAGCACCAGATCCTGCCAGCATTTAGCCCTCTGTTGGTACAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
||
| 3UTR GCA 72 bp | TTCAGGGAAATAAAGCAGGGTTTCATCTGCACAGGATaGCCCTTGGAGAATAATAGCAGTTACACAGTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: FREIKQGFICTG*PLENNSSYTVC Trigger: GCAGACTGTGTAACTGCTATTATTCTCCAAGGGGCATCCTGTGCAGATGAAACCCTGCTTTATTTCCCTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
||
| 3UTR CCA 72 bp | GCTAAATGCTGGCAGGATCTGGTGCTGTTATTTCTATaGCCCATTGCTGGTCTCATATTTTACAAATACTTG | + |
|
Preference number: 3 (lower is better) Translates to: AKCWQDLVLLFL*PIAGLIFYKYL Trigger: CAAGTATTTGTAAAATATGAGACCAGCAATGGGCCATAGAAATAACAGCACCAGATCCTGCCAGCATTTAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
||
| 3UTR-3UTR CAA 90 bp | AGTAGGTCTCTGTATATTCAATTGTTAATTTTGTACCAACAGAGGGCTAAATGCCAGGGAGACAAGAACTaGCTTCCTATGGAAGAACAG | + |
|
Preference number: 3 (lower is better) Translates to: SRSLYIQLLILYQQRAKCQGDKN*LPMEEQ Trigger: CTGTTCTTCCATAGGAAGCAAGTTCTTGTCTCCCTG...GCATTTAGCCCTCTGTTGGTACAAAATTAACAATTGAATATACAGAGACCTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
||
| 3UTR CCA 72 bp | ATATTAATAAACTTCTGTTGTCATTATTTATCTAGCTaGCAGGTCTGTGAAAGTCCCATTGGACCCTGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: ILINFCCHYLSS*QVCESPIGPCG Trigger: ACCACAGGGTCCAATGGGACTTTCACAGACCTGCCAGCTAGATAAATAATGACAACAGAAGTTTATTAATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
||
| 3UTR-3UTR CAA 90 bp | AGTAGGTCTCTGTATATTCAATTGTTAATTTTGTACCAACAGAGGGCTAAATGCCATTGGACCCTGTGGTaGTTATCAGATGTTAATTTA | + |
|
Preference number: 3 (lower is better) Translates to: SRSLYIQLLILYQQRAKCHWTLW*LSDVNL Trigger: TAAATTAACATCTGATAACAACCACAGGGTCCAATG...GCATTTAGCCCTCTGTTGGTACAAAATTAACAATTGAATATACAGAGACCTACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
||
| CDS-3UTR TCA 90 bp | AGACATGGAGGTGGATGGAGAGTGGAGCAGAGAGGTAGACCTGGCCATGTGGTGCTTCCACAGCTCCTGTaGGGCAGAGGCACAGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: RHGGGWRVEQRGRPGHVVLPQLL*GRGTAP Trigger: GGGTGCTGTGCCTCTGCCTCACAGGAGCTGTGGAAG...CACCACATGGCCAGGTCTACCTCTCTGCTCCACTCTCCATCCACCTCCATGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
||
| CDS-3UTR TCA 90 bp | CCCAGGGCAGCCAGGAGACCATGCAAGGCAAGTATGTGCGTGATCCAGCACGCACCCTGTGATGGTGACTaGGCCGTGAGCATCTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PRAARRPCKASMCVIQHAPCDGD*AVSILL Trigger: CAGCAAGATGCTCACGGCTCAGTCACCATCACAGGG...TGCGTGCTGGATCACGCACATACTTGCCTTGCATGGTCTCCTGGCTGCCCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
||
| CDS-3UTR GCA 90 bp | ATGGAGGTGGATGGAGAGTGGAGCAGAGAGGTAGACCTGGCCATGTGGTGGGACCAGGGAAGAGCGCTGTaGGGTTGGAGTAGGCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: MEVDGEWSREVDLAMWWDQGRAL*GWSRHC Trigger: GCAGTGCCTACTCCAACCGCACAGCGCTCTTCCCTG...GTCCCACCACATGGCCAGGTCTACCTCTCTGCTCCACTCTCCATCCACCTCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
||
| CDS-3UTR CCA 90 bp | ATGGAGGTGGATGGAGAGTGGAGCAGAGAGGTAGACCTGGCCATGTGGTGGGACCACACACACCCACACTaGGGCCACCCCATCCTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: MEVDGEWSREVDLAMWWDHTHPH*GHPILE Trigger: TTCGAGGATGGGGTGGCCCCAGTGTGGGTGTGTGTG...GTCCCACCACATGGCCAGGTCTACCTCTCTGCTCCACTCTCCATCCACCTCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
||
| 3UTR CAA 72 bp | CCCCTGAGGGGCCCTGAGAACCAGGGAGACAAGAACTaGCTTCCTATGGAAGAACAGGCACAGCCCAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PLRGPENQGDKN*LPMEEQAQPRA Trigger: TGCCCTGGGCTGTGCCTGTTCTTCCATAGGAAGCAAGTTCTTGTCTCCCTGGTTCTCAGGGCCCCTCAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
||
| CDS-3UTR CCA 90 bp | CCCAGGGCAGCCAGGAGACCATGCAAGGCAAGTATGTGCGTGATCCAGCACGCATCTCCATCTCCATCCTaGTCCTCGGCACCTGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: PRAARRPCKASMCVIQHASPSPS*SSAPAF Trigger: GAATGCAGGTGCCGAGGACCAGGATGGAGATGGAGA...TGCGTGCTGGATCACGCACATACTTGCCTTGCATGGTCTCCTGGCTGCCCTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
||
| CDS-3UTR CCA 90 bp | ATGGAGGTGGATGGAGAGTGGAGCAGAGAGGTAGACCTGGCCATGTGGTGGGACTCTCCATCTCCATCCTaGTCCTCGGCACCTGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: MEVDGEWSREVDLAMWWDSPSPS*SSAPAF Trigger: GAATGCAGGTGCCGAGGACCAGGATGGAGATGGAGA...GTCCCACCACATGGCCAGGTCTACCTCTCTGCTCCACTCTCCATCCACCTCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
||
| 3UTR CAA 72 bp | CAGATCAGATCAGGGCAGGGAGGTCAGGATGAAGCCTaGCTGAGCGATGGGATCCCACCCTCAGAACTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QIRSGQGGQDEA*LSDGIPPSELR Trigger: CCTCAGTTCTGAGGGTGGGATCCCATCGCTCAGCAAGGCTTCATCCTGACCTCCCTGCCCTGATCTGATCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
||
| CDS-3UTR GCA 90 bp | AGCCAGGGCAGTCAGAGACAAGCCAGGTATATATCCCAGCTCCAGAATAGCACCCTGGTCCTCGGCACCTaGATTCTCCTCCTCGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SQGSQRQARYISQLQNSTLVLGT*ILLLAA Trigger: AGCTGCGAGGAGGAGAATGCAGGTGCCGAGGACCAG...GGTGCTATTCTGGAGCTGGGATATATACCTGGCTTGTCTCTGACTGCCCTGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
||
| CDS-3UTR CCA 90 bp | GACCTGACCCAGGTCTGCACGGCTGTGGCCACCTGCCTTCCAGTCCACATCTATGCCGTAGAGCTGTCTTaGATCCTTCTCCATCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: DLTQVCTAVATCLPVHIYAVELS*ILLHLH Trigger: ATGGAGATGGAGAAGGATCCAAGACAGCTCTACGGC...ATAGATGTGGACTGGAAGGCAGGTGGCCACAGCCGTGCAGACCTGGGTCAGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
||
| CDS-3UTR GCA 90 bp | ACCCAGGTCTGCACGGCTGTGGCCACCTGCCTTCCAGTCCACATCTATAAAGACTCCTCCTCGCAGCTCTaGTTGATCTTTCTCCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: TQVCTAVATCLPVHIYKDSSSQL*LIFLQH Trigger: GTGCTGGAGAAAGATCAAGCAGAGCTGCGAGGAGGA...GTCTTTATAGATGTGGACTGGAAGGCAGGTGGCCACAGCCGTGCAGACCTGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
||
| CDS-3UTR CCA 90 bp | AATTATCCTCAGGTTCTCAGGTACTGGGGTGGGAGAGAGGCCTTCAGGAGGACAACAAGCCCCGCTCGTTaGCCATCTGGGATGTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: NYPQVLRYWGGREAFRRTTSPAR*PSGMWS Trigger: TGACCACATCCCAGATGGCCAACGAGCGGGGCTTGT...TGTCCTCCTGAAGGCCTCTCTCCCACCCCAGTACCTGAGAACCTGAGGATAATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
||
| CDS-3UTR GCA 90 bp | ATGGAGGTGGATGGAGAGTGGAGCAGAGAGGTAGACCTGGCCATGTGGTGGGACTGTCAAAGTCCTGGATaGTCACAAAGCAGGTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: MEVDGEWSREVDLAMWWDCQSPG*SQSRCS Trigger: GCTACACCTGCTTTGTGAGCATCCAGGACTTTGACA...GTCCCACCACATGGCCAGGTCTACCTCTCTGCTCCACTCTCCATCCACCTCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
||
| CDS-3UTR GCA 90 bp | GCAGGATGGTTCGTGTATCGTGTCACTGGAGAAATGAGGCTGCAGGATGATGGGTCCTCCTCGCAGCTCTaGTTGATCTTTCTCCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: AGWFVYRVTGEMRLQDDGSSSQL*LIFLQH Trigger: GTGCTGGAGAAAGATCAAGCAGAGCTGCGAGGAGGA...CCCATCATCCTGCAGCCTCATTTCTCCAGTGACACGATACACGAACCATCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
||
| CDS-3UTR CCA 90 bp | CTGTGTAGCCCCAGATGTCCTGGAACTCACTCGATAGACCAGGCTGAGTCAAAAGGGTCTTCAGAGACCTaGACTTCCACAGCTCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LCSPRCPGTHSIDQAESKGSSET*TSTAPV Trigger: CACAGGAGCTGTGGAAGTCCAGGTCTCTGAAGACCC...TTTTGACTCAGCCTGGTCTATCGAGTGAGTTCCAGGACATCTGGGGCTACACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
||
| 3UTR CAA 72 bp | TTGGAGAATAATAGCAGTTACACAGTCTGCATGGCTTaGGAGGAGCAAGGGTGTGGGGGTGGTGCGTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LENNSSYTVCMA*EEQGCGGGACV Trigger: CACACACGCACCACCCCCACACCCTTGCTCCTCCAAAGCCATGCAGACTGTGTAACTGCTATTATTCTCCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
||
| CDS-3UTR TCA 90 bp | TCGAAGATGGTACTTCTGGGCAGAGATAGGGACTCTGGGAGAAGAACTGAATCACCCTGTGATGGTGACTaGGCCGTGAGCATCTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SKMVLLGRDRDSGRRTESPCDGD*AVSILL Trigger: CAGCAAGATGCTCACGGCTCAGTCACCATCACAGGG...TGATTCAGTTCTTCTCCCAGAGTCCCTATCTCTGCCCAGAAGTACCATCTTCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
||
| CDS-3UTR TCA 90 bp | TTCTGGGCAGAGATAGGGACTCTGGGAGAAGAACTGAATCACGGGAGATTTGCTCCTCGCAGCTCTGCTTaGTCTTTCTCCAGCACACGA | + |
|
Preference number: 4 (lower is better) Translates to: FWAEIGTLGEELNHGRFAPRSSA*SFSSTR Trigger: TCGTGTGCTGGAGAAAGATCAAGCAGAGCTGCGAGG...AGCAAATCTCCCGTGATTCAGTTCTTCTCCCAGAGTCCCTATCTCTGCCCAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
||
| CDS-3UTR TCA 90 bp | CTCCAGAATAGCACCATGGTAAGAAGGCCTTTCTTGTCCTCAGGCCCTCTTCATCCTCGCAGCTCTGCTTaGTCTTTCTCCAGCACACGA | + |
|
Preference number: 4 (lower is better) Translates to: LQNSTMVRRPFLSSGPLHPRSSA*SFSSTR Trigger: TCGTGTGCTGGAGAAAGATCAAGCAGAGCTGCGAGG...ATGAAGAGGGCCTGAGGACAAGAAAGGCCTTCTTACCATGGTGCTATTCTGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
||
| CDS-3UTR GCA 90 bp | AATGAAGAGCTGACGGCCAATAGTTGGGCAGGAAGTCGAAGATGGTACTTCTGGGGGATGTGGTCACATTaGCAGTCAAGGGCACTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: NEELTANSWAGSRRWYFWGMWSH*QSRALP Trigger: AGGGAGTGCCCTTGACTGGCAATGTGACCACATCCC...CCAGAAGTACCATCTTCGACTTCCTGCCCAACTATTGGCCGTCAGCTCTTCATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
||
| 3UTR CAA 72 bp | CAGCTCCAGAATAGCACCATGGTAAGAAGGCCTTTCTaGTCCTCAGGCCCTCTTCATGCTTCTGCTGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QLQNSTMVRRPF*SSGPLHASAVE Trigger: CTCAACAGCAGAAGCATGAAGAGGGCCTGAGGACAAGAAAGGCCTTCTTACCATGGTGCTATTCTGGAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
||
| CDS-3UTR GCA 90 bp | GGATCTGGTGCTGTTATTTCTATGGCCCATTGCTGGTCTCATATTTTACAAATAGCACAGCACCCCCAGTaGTGTGCGCACACACACACC | + |
|
Preference number: 4 (lower is better) Translates to: GSGAVISMAHCWSHILQIAQHPQ*CAHTHT Trigger: GGTGTGTGTGTGCGCACAGCACTGGGGGTGCTGTGC...TATTTGTAAAATATGAGACCAGCAATGGGCCATAGAAATAACAGCACCAGATCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
||
| CDS-3UTR GCA 90 bp | TTCTGGGCAGAGATAGGGACTCTGGGAGAAGAACTGAATCACGGGAGATTTGCTTGTCAAAGTCCTGGATaGTCACAAAGCAGGTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: FWAEIGTLGEELNHGRFACQSPG*SQSRCS Trigger: GCTACACCTGCTTTGTGAGCATCCAGGACTTTGACA...AGCAAATCTCCCGTGATTCAGTTCTTCTCCCAGAGTCCCTATCTCTGCCCAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
||
| CDS-3UTR GCA 90 bp | GGCCCATTGCTGGTCTCATATTTTACAAATACTTGTTTCTTCCTCACCTGCCTAGGGAATGTCAGGGGCTaGCCTGTGATGGTGACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GPLLVSYFTNTCFFLTCLGNVRG*PVMVTE Trigger: CTCAGTCACCATCACAGGGCAGCCCCTGACATTCCC...TAGGCAGGTGAGGAAGAAACAAGTATTTGTAAAATATGAGACCAGCAATGGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
||
| CDS-3UTR GCA 90 bp | GGATCTGGTGCTGTTATTTCTATGGCCCATTGCTGGTCTCATATTTTACAAATACTGGTCCTCGGCACCTaGATTCTCCTCCTCGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GSGAVISMAHCWSHILQILVLGT*ILLLAA Trigger: AGCTGCGAGGAGGAGAATGCAGGTGCCGAGGACCAG...TATTTGTAAAATATGAGACCAGCAATGGGCCATAGAAATAACAGCACCAGATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
||
| CDS-3UTR GCA 90 bp | AGTAGGTCTCTGTATATTCAATTGTTAATTTTGTACCAACAGAGGGCTAAATGCGCACAGCACCCCCAGTaGTGTGCGCACACACACACC | + |
|
Preference number: 4 (lower is better) Translates to: SRSLYIQLLILYQQRAKCAQHPQ*CAHTHT Trigger: GGTGTGTGTGTGCGCACAGCACTGGGGGTGCTGTGC...GCATTTAGCCCTCTGTTGGTACAAAATTAACAATTGAATATACAGAGACCTACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
||
| CDS-3UTR CCA 90 bp | AGGTCTCTGTATATTCAATTGTTAATTTTGTACCAACAGAGGGCTAAATGCTGGCACACACACCCACACTaGGGCCACCCCATCCTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: RSLYIQLLILYQQRAKCWHTHPH*GHPILE Trigger: TTCGAGGATGGGGTGGCCCCAGTGTGGGTGTGTGTG...CCAGCATTTAGCCCTCTGTTGGTACAAAATTAACAATTGAATATACAGAGACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
||
| CDS-3UTR CCA 90 bp | GGATCTGGTGCTGTTATTTCTATGGCCCATTGCTGGTCTCATATTTTACAAATAGGGTCTTCAGAGACCTaGACTTCCACAGCTCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GSGAVISMAHCWSHILQIGSSET*TSTAPV Trigger: CACAGGAGCTGTGGAAGTCCAGGTCTCTGAAGACCC...TATTTGTAAAATATGAGACCAGCAATGGGCCATAGAAATAACAGCACCAGATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
||
| 3UTR CAA 72 bp | GAAATAAAGCAGGGTTTCATCTGCACAGGATGCCCCTaGGAGAATAATAGCAGTTACACAGTCTGCATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: EIKQGFICTGCP*ENNSSYTVCMA Trigger: AGCCATGCAGACTGTGTAACTGCTATTATTCTCCAAGGGGCATCCTGTGCAGATGAAACCCTGCTTTATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| CDS-3UTR GCA 90 bp | AGTAGGTCTCTGTATATTCAATTGTTAATTTTGTACCAACAGAGGGCTAAATGCGGGAATGTCAGGGGCTaGCCTGTGATGGTGACTGAG | + |
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Preference number: 4 (lower is better) Translates to: SRSLYIQLLILYQQRAKCGNVRG*PVMVTE Trigger: CTCAGTCACCATCACAGGGCAGCCCCTGACATTCCC...GCATTTAGCCCTCTGTTGGTACAAAATTAACAATTGAATATACAGAGACCTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| CDS-3UTR GCA 90 bp | AGTAGGTCTCTGTATATTCAATTGTTAATTTTGTACCAACAGAGGGCTAAATGCGGGATGTGGTCACATTaGCAGTCAAGGGCACTCCCT | + |
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Preference number: 4 (lower is better) Translates to: SRSLYIQLLILYQQRAKCGMWSH*QSRALP Trigger: AGGGAGTGCCCTTGACTGGCAATGTGACCACATCCC...GCATTTAGCCCTCTGTTGGTACAAAATTAACAATTGAATATACAGAGACCTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| CDS-3UTR CCA 90 bp | GGATCTGGTGCTGTTATTTCTATGGCCCATTGCTGGTCTCATATTTTACAAATAGCCGTAGAGCTGTCTTaGATCCTTCTCCATCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: GSGAVISMAHCWSHILQIAVELS*ILLHLH Trigger: ATGGAGATGGAGAAGGATCCAAGACAGCTCTACGGC...TATTTGTAAAATATGAGACCAGCAATGGGCCATAGAAATAACAGCACCAGATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| 3UTR CAA 72 bp | GCTGGCAGGATCTGGTGCTGTTATTTCTATGGCCCATaGCTGGTCTCATATTTTACAAATACTTGTTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: AGRIWCCYFYGP*LVSYFTNTCFF Trigger: GAAGAAACAAGTATTTGTAAAATATGAGACCAGCAATGGGCCATAGAAATAACAGCACCAGATCCTGCCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| 3UTR CAA 72 bp | TCTGGAAGTAGGTCTCTGTATATTCAATTGTTAATTTaGTACCAACAGAGGGCTAAATGCTGGCAGGATCTG | + |
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Preference number: 4 (lower is better) Translates to: SGSRSLYIQLLI*YQQRAKCWQDL Trigger: CAGATCCTGCCAGCATTTAGCCCTCTGTTGGTACAAAATTAACAATTGAATATACAGAGACCTACTTCCAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| CDS-3UTR CAA 90 bp | GACCTGACCCAGGTCTGCACGGCTGTGGCCACCTGCCTTCCAGTCCACATCTATTCCTCGCAGCTCTGCTaGATCTTTCTCCAGCACACG | + |
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Preference number: 5 (lower is better) Translates to: DLTQVCTAVATCLPVHIYSSQLC*IFLQHT Trigger: CGTGTGCTGGAGAAAGATCAAGCAGAGCTGCGAGGA...ATAGATGTGGACTGGAAGGCAGGTGGCCACAGCCGTGCAGACCTGGGTCAGGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| CDS TCA 90 bp | CATCCTGGTCCTCGGCACCTGCATTCTCCTCCTCGCAGCTCTGCTTaGTCTTTCTCCAGCACACGAAAGCCAGGGCCACCAGTAGTACCA | + |
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Preference number: 5 (lower is better) Translates to: HPGPRHLHSPPRSSA*SFSSTRKPGPPVVP Trigger: TGGTACTACTGGTGGCCCTGGCTTTCGTGTGCTGGAGAAAGATCAAGCAGAGCTGCGAGGAGGAGAATGCAGGTGCCGAGGACCAGGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 ENSMUST00000216629.2 |
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| CDS GCA 90 bp | TCTCCATCCTGGTCCTCGGCACCTGCATTCTCCTCCTCGCAGCTCTaGTTGATCTTTCTCCAGCACACGAAAGCCAGGGCCACCAGTAGT | + |
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Preference number: 5 (lower is better) Translates to: SPSWSSAPAFSSSQL*LIFLQHTKARATSS Trigger: ACTACTGGTGGCCCTGGCTTTCGTGTGCTGGAGAAAGATCAAGCAGAGCTGCGAGGAGGAGAATGCAGGTGCCGAGGACCAGGATGGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 ENSMUST00000216629.2 |
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| CDS CCA 90 bp | TTCAGAGGCCGTAGAGCTGTCTTGGATCCTTCTCCATCTCCATCCTaGTCCTCGGCACCTGCATTCTCCTCCTCGCAGCTCTGCTTGATC | + |
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Preference number: 5 (lower is better) Translates to: FRGRRAVLDPSPSPS*SSAPAFSSSQLCLI Trigger: GATCAAGCAGAGCTGCGAGGAGGAGAATGCAGGTGCCGAGGACCAGGATGGAGATGGAGAAGGATCCAAGACAGCTCTACGGCCTCTGAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 ENSMUST00000216629.2 |
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| CDS-3UTR CAA 90 bp | AATGAAGAGCTGACGGCCAATAGTTGGGCAGGAAGTCGAAGATGGTACTTCTGGAACAAGCCCCGCTCGTaGGCCATCTGGGATGTGGTC | + |
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Preference number: 5 (lower is better) Translates to: NEELTANSWAGSRRWYFWNKPRS*AIWDVV Trigger: GACCACATCCCAGATGGCCAACGAGCGGGGCTTGTT...CCAGAAGTACCATCTTCGACTTCCTGCCCAACTATTGGCCGTCAGCTCTTCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| CDS-3UTR CAA 90 bp | AGCCAGGGCAGTCAGAGACAAGCCAGGTATATATCCCAGCTCCAGAATAGCACCTCCTCGCAGCTCTGCTaGATCTTTCTCCAGCACACG | + |
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Preference number: 5 (lower is better) Translates to: SQGSQRQARYISQLQNSTSSQLC*IFLQHT Trigger: CGTGTGCTGGAGAAAGATCAAGCAGAGCTGCGAGGA...GGTGCTATTCTGGAGCTGGGATATATACCTGGCTTGTCTCTGACTGCCCTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| CDS-3UTR CAA 90 bp | AGGTCTCTGTATATTCAATTGTTAATTTTGTACCAACAGAGGGCTAAATGCTGGAACAAGCCCCGCTCGTaGGCCATCTGGGATGTGGTC | + |
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Preference number: 5 (lower is better) Translates to: RSLYIQLLILYQQRAKCWNKPRS*AIWDVV Trigger: GACCACATCCCAGATGGCCAACGAGCGGGGCTTGTT...CCAGCATTTAGCCCTCTGTTGGTACAAAATTAACAATTGAATATACAGAGACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| CDS-3UTR CAA 90 bp | AGGTCTCTGTATATTCAATTGTTAATTTTGTACCAACAGAGGGCTAAATGCTGGTGTCCGTCATCTTCTTaGTTTTCAGAGGGTTTCAGA | + |
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Preference number: 5 (lower is better) Translates to: RSLYIQLLILYQQRAKCWCPSSS*FSEGFR Trigger: TCTGAAACCCTCTGAAAACAAAGAAGATGACGGACA...CCAGCATTTAGCCCTCTGTTGGTACAAAATTAACAATTGAATATACAGAGACCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| CDS GCA 72 bp | CACAGCTCCTGTGAGGCAGAGGCACAGCACCCCCAGTaGTGTGCGCACACACACACCCACACTGGGGCCACC | + |
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Preference number: 6 (lower is better) Translates to: HSSCEAEAQHPQ*CAHTHTHTGAT Trigger: GGTGGCCCCAGTGTGGGTGTGTGTGTGCGCACAGCACTGGGGGTGCTGTGCCTCTGCCTCACAGGAGCTGTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| CDS TCA 72 bp | CGGGGTCTTCAGAGACCTGGACTTCCACAGCTCCTGTaGGGCAGAGGCACAGCACCCCCAGTGCTGTGCGCA | + |
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Preference number: 6 (lower is better) Translates to: RGLQRPGLPQLL*GRGTAPPVLCA Trigger: TGCGCACAGCACTGGGGGTGCTGTGCCTCTGCCTCACAGGAGCTGTGGAAGTCCAGGTCTCTGAAGACCCCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 |
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| CDS TCA 72 bp | CCTCGGCACCTGCATTCTCCTCCTCGCAGCTCTGCTTaGTCTTTCTCCAGCACACGAAAGCCAGGGCCACCA | + |
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Preference number: 6 (lower is better) Translates to: PRHLHSPPRSSA*SFSSTRKPGPP Trigger: TGGTGGCCCTGGCTTTCGTGTGCTGGAGAAAGATCAAGCAGAGCTGCGAGGAGGAGAATGCAGGTGCCGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 ENSMUST00000216629.2 |
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| CDS GCA 72 bp | TTCCAGGAGGTCTCTACGGCCTTGGAGTCGGCCACCTaGAGGCTAACAGCAGCGCTGTCAAAGTCCTGGATG | + |
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Preference number: 6 (lower is better) Translates to: FQEVSTALESAT*RLTAALSKSWM Trigger: CATCCAGGACTTTGACAGCGCTGCTGTTAGCCTGCAGGTGGCCGACTCCAAGGCCGTAGAGACCTCCTGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213722.2 |
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| CDS CAA 90 bp | CCATCCTGGTCCTCGGCACCTGCATTCTCCTCCTCGCAGCTCTGCTaGATCTTTCTCCAGCACACGAAAGCCAGGGCCACCAGTAGTACC | + |
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Preference number: 6 (lower is better) Translates to: PSWSSAPAFSSSQLC*IFLQHTKARATSST Trigger: GGTACTACTGGTGGCCCTGGCTTTCGTGTGCTGGAGAAAGATCAAGCAGAGCTGCGAGGAGGAGAATGCAGGTGCCGAGGACCAGGATGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 ENSMUST00000216629.2 |
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| CDS CCA 72 bp | CGTAGAGCTGTCTTGGATCCTTCTCCATCTCCATCCTaGTCCTCGGCACCTGCATTCTCCTCCTCGCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: RRAVLDPSPSPS*SSAPAFSSSQL Trigger: GAGCTGCGAGGAGGAGAATGCAGGTGCCGAGGACCAGGATGGAGATGGAGAAGGATCCAAGACAGCTCTACG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039788.11 ENSMUST00000165365.3 ENSMUST00000216629.2 |
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