Pregenerated sensors for CD248 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056481Ensembl transcript IDs: ENSMUST00000070630.8
Found 150 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGTTGGCACCCCATTTATTGGAGAAGATCCCAGCACCCACCCCTTaGGGTCCTGGAGTCCTGGTGTGTCCTTTGCCATGGATGCTGGGC | + |
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Preference number: 1 (lower is better) Translates to: RLAPHLLEKIPAPTP*GPGVLVCPLPWMLG Trigger: GCCCAGCATCCATGGCAAAGGACACACCAGGACTCCAGGACCTCAAGGGGTGGGTGCTGGGATCTTCTCCAATAAATGGGGTGCCAACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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| 3UTR GCA 90 bp | TCCCAGCACCCACCCCTTGAGGTCCTGGAGTCCTGGTGTGTCCTTTaGCATGGATGCTGGGCTCAAAGAACAGAACCTCCTCTGTCAGCT | + |
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Preference number: 1 (lower is better) Translates to: SQHPPLEVLESWCVL*HGCWAQRTEPPLSA Trigger: AGCTGACAGAGGAGGTTCTGTTCTTTGAGCCCAGCATCCATGGCAAAGGACACACCAGGACTCCAGGACCTCAAGGGGTGGGTGCTGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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| 3UTR TCA 90 bp | CCCAGACCCTTCCCTCAGGCATCAGTGGGGATGATGAACTTTGGGTaGGGTTGGCACCCCATTTATTGGAGAAGATCCCAGCACCCACCC | + |
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Preference number: 1 (lower is better) Translates to: PRPFPQASVGMMNFG*GWHPIYWRRSQHPP Trigger: GGGTGGGTGCTGGGATCTTCTCCAATAAATGGGGTGCCAACCTCACCCAAAGTTCATCATCCCCACTGATGCCTGAGGGAAGGGTCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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| 3UTR CCA 90 bp | TTGCCATGGATGCTGGGCTCAAAGAACAGAACCTCCTCTGTCAGCTaGGCAGCCCCCATAAGTCCTTGGTGTGGTCTCAGCCATGTGTCC | + |
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Preference number: 1 (lower is better) Translates to: LPWMLGSKNRTSSVS*AAPISPWCGLSHVS Trigger: GGACACATGGCTGAGACCACACCAAGGACTTATGGGGGCTGCCCAGCTGACAGAGGAGGTTCTGTTCTTTGAGCCCAGCATCCATGGCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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| 3UTR CCA 90 bp | CAGAACCTCCTCTGTCAGCTGGGCAGCCCCCATAAGTCCTTGGTGTaGTCTCAGCCATGTGTCCAAAGCAAGTCCTTTTCTTCTATCCCA | + |
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Preference number: 1 (lower is better) Translates to: QNLLCQLGSPHKSLV*SQPCVQSKSFSSIP Trigger: TGGGATAGAAGAAAAGGACTTGCTTTGGACACATGGCTGAGACCACACCAAGGACTTATGGGGGCTGCCCAGCTGACAGAGGAGGTTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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| 3UTR CCA 90 bp | AAGAACAGAACCTCCTCTGTCAGCTGGGCAGCCCCCATAAGTCCTTaGTGTGGTCTCAGCCATGTGTCCAAAGCAAGTCCTTTTCTTCTA | + |
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Preference number: 1 (lower is better) Translates to: KNRTSSVSWAAPISP*CGLSHVSKASPFLL Trigger: TAGAAGAAAAGGACTTGCTTTGGACACATGGCTGAGACCACACCAAGGACTTATGGGGGCTGCCCAGCTGACAGAGGAGGTTCTGTTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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| 3UTR-3UTR CCA 90 bp | GTCCTGGTGTGTCCTTTGCCATGGATGCTGGGCTCAAAGAACAGAACCTCCTCTGCCCCCATAAGTCCTTaGTGTGGTCTCAGCCATGTG | + |
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Preference number: 2 (lower is better) Translates to: VLVCPLPWMLGSKNRTSSAPISP*CGLSHV Trigger: CACATGGCTGAGACCACACCAAGGACTTATGGGGGC...AGAGGAGGTTCTGTTCTTTGAGCCCAGCATCCATGGCAAAGGACACACCAGGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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| 3UTR CCA 72 bp | AGATCCCAGCACCCACCCCTTGAGGTCCTGGAGTCCTaGTGTGTCCTTTGCCATGGATGCTGGGCTCAAAGA | + |
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Preference number: 3 (lower is better) Translates to: RSQHPPLEVLES*CVLCHGCWAQR Trigger: TCTTTGAGCCCAGCATCCATGGCAAAGGACACACCAGGACTCCAGGACCTCAAGGGGTGGGTGCTGGGATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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| 3UTR CCA 72 bp | ATGCTGGGCTCAAAGAACAGAACCTCCTCTGTCAGCTaGGCAGCCCCCATAAGTCCTTGGTGTGGTCTCAGC | + |
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Preference number: 3 (lower is better) Translates to: MLGSKNRTSSVS*AAPISPWCGLS Trigger: GCTGAGACCACACCAAGGACTTATGGGGGCTGCCCAGCTGACAGAGGAGGTTCTGTTCTTTGAGCCCAGCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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| 3UTR GCA 72 bp | GAGGTCCTGGAGTCCTGGTGTGTCCTTTGCCATGGATaGTGGGCTCAAAGAACAGAACCTCCTCTGTCAGCT | + |
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Preference number: 3 (lower is better) Translates to: EVLESWCVLCHG*WAQRTEPPLSA Trigger: AGCTGACAGAGGAGGTTCTGTTCTTTGAGCCCAGCATCCATGGCAAAGGACACACCAGGACTCCAGGACCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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| 3UTR-3UTR CAA 90 bp | TCCTGGAGTCCTGGTGTGTCCTTTGCCATGGATGCTGGGCTCAAAGAACAGAACAGCCCCCATAAGTCCTaGGTGTGGTCTCAGCCATGT | + |
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Preference number: 3 (lower is better) Translates to: SWSPGVSFAMDAGLKEQNSPHKS*VWSQPC Trigger: ACATGGCTGAGACCACACCAAGGACTTATGGGGGCT...GTTCTGTTCTTTGAGCCCAGCATCCATGGCAAAGGACACACCAGGACTCCAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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| 3UTR CCA 72 bp | CTCTGTCAGCTGGGCAGCCCCCATAAGTCCTTGGTGTaGTCTCAGCCATGTGTCCAAAGCAAGTCCTTTTCT | + |
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Preference number: 3 (lower is better) Translates to: LCQLGSPHKSLV*SQPCVQSKSFS Trigger: AGAAAAGGACTTGCTTTGGACACATGGCTGAGACCACACCAAGGACTTATGGGGGCTGCCCAGCTGACAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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| CDS-3UTR GCA 90 bp | AGATCCCAGCACCCACCCCTTGAGGTCCTGGAGTCCTGGTGTGTCCTTTGCCATCCCCGCAGTGGGCGCTaGGGCTGGCATTGCCTAGCC | + |
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Preference number: 4 (lower is better) Translates to: RSQHPPLEVLESWCVLCHPRSGR*GWHCLA Trigger: GGCTAGGCAATGCCAGCCGCAGCGCCCACTGCGGGG...ATGGCAAAGGACACACCAGGACTCCAGGACCTCAAGGGGTGGGTGCTGGGATCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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| CDS-3UTR CCA 90 bp | TTGGGTGAGGTTGGCACCCCATTTATTGGAGAAGATCCCAGCACCCACCCCTTGGCGCGTAGCAGCTGCTaGGGCCGCACGCGGCTCGAG | + |
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Preference number: 4 (lower is better) Translates to: LGEVGTPFIGEDPSTHPLARSSC*GRTRLE Trigger: CTCGAGCCGCGTGCGGCCCCAGCAGCTGCTACGCGC...CAAGGGGTGGGTGCTGGGATCTTCTCCAATAAATGGGGTGCCAACCTCACCCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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| CDS-3UTR CCA 90 bp | TCCTCTGTCAGCTGGGCAGCCCCCATAAGTCCTTGGTGTGGTCTCAGCCATGTGAGTGGGCGCTGCGGCTaGCATTGCCTAGCCTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: SSVSWAAPISPWCGLSHVSGRCG*HCLACR Trigger: GCGGCAGGCTAGGCAATGCCAGCCGCAGCGCCCACT...CACATGGCTGAGACCACACCAAGGACTTATGGGGGCTGCCCAGCTGACAGAGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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| CDS-3UTR CCA 90 bp | TCCTCTGTCAGCTGGGCAGCCCCCATAAGTCCTTGGTGTGGTCTCAGCCATGTGAGGGCTGCACAGCGCTaGGCTGGGCAGGGTCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: SSVSWAAPISPWCGLSHVRAAQR*AGQGPS Trigger: GGAAGGACCCTGCCCAGCCCAGCGCTGTGCAGCCCT...CACATGGCTGAGACCACACCAAGGACTTATGGGGGCTGCCCAGCTGACAGAGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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| CDS-3UTR GCA 90 bp | AACCTCCTCTGTCAGCTGGGCAGCCCCCATAAGTCCTTGGTGTGGTCTCAGCCACGCTGCGGCTGGCATTaGCTAGCCTGCCGCTGCAAC | + |
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Preference number: 4 (lower is better) Translates to: NLLCQLGSPHKSLVWSQPRCGWH*LACRCN Trigger: GTTGCAGCGGCAGGCTAGGCAATGCCAGCCGCAGCG...TGGCTGAGACCACACCAAGGACTTATGGGGGCTGCCCAGCTGACAGAGGAGGTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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| CDS-3UTR CCA 90 bp | CTCCTCTGTCAGCTGGGCAGCCCCCATAAGTCCTTGGTGTGGTCTCAGCCATGTACCACAGCCAGTCCCTaGGCACAGCGGGCCAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLCQLGSPHKSLVWSQPCTTASP*AQRASL Trigger: CAGACTGGCCCGCTGTGCCCAGGGACTGGCTGTGGT...ACATGGCTGAGACCACACCAAGGACTTATGGGGGCTGCCCAGCTGACAGAGGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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| CDS-3UTR TCA 90 bp | GAGGTTGGCACCCCATTTATTGGAGAAGATCCCAGCACCCACCCCTTGAGGTCCGCTGGGCCCAGTTGGTaGAGGCGGTGTCCTGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: EVGTPFIGEDPSTHPLRSAGPSW*RRCPGL Trigger: GAGACCAGGACACCGCCTTCACCAACTGGGCCCAGC...GGACCTCAAGGGGTGGGTGCTGGGATCTTCTCCAATAAATGGGGTGCCAACCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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| CDS-3UTR CCA 90 bp | CCCTCAGGCATCAGTGGGGATGATGAACTTTGGGTGAGGTTGGCACCCCATTTAACGCTGGGCCTCCTCTaGGGTCCGCGGTGTGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: PSGISGDDELWVRLAPHLTLGLL*GPRCGQ Trigger: CTGGCCACACCGCGGACCCCAGAGGAGGCCCAGCGT...TAAATGGGGTGCCAACCTCACCCAAAGTTCATCATCCCCACTGATGCCTGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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| CDS-3UTR CCA 90 bp | TCTGTCAGCTGGGCAGCCCCCATAAGTCCTTGGTGTGGTCTCAGCCATGTGTCCGGCACTAAGTGGGGGTaGCCAGGTAGGCTCCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: SVSWAAPISPWCGLSHVSGTKWG*PGRLQV Trigger: CACCTGGAGCCTACCTGGCCACCCCCACTTAGTGCC...GGACACATGGCTGAGACCACACCAAGGACTTATGGGGGCTGCCCAGCTGACAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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| CDS-3UTR CCA 90 bp | GAGGTTGGCACCCCATTTATTGGAGAAGATCCCAGCACCCACCCCTTGAGGTCCCCTGGGGGCACTAAGTaGGGGTGGCCAGGTAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: EVGTPFIGEDPSTHPLRSPGGTK*GWPGRL Trigger: GAGCCTACCTGGCCACCCCCACTTAGTGCCCCCAGG...GGACCTCAAGGGGTGGGTGCTGGGATCTTCTCCAATAAATGGGGTGCCAACCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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| CDS-3UTR CCA 90 bp | AAGAACAGAACCTCCTCTGTCAGCTGGGCAGCCCCCATAAGTCCTTGGTGTGGTGTGTGGCAGGGGCCATaGCAGGTGGGTGGACAGGGC | + |
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Preference number: 4 (lower is better) Translates to: KNRTSSVSWAAPISPWCGVWQGP*QVGGQG Trigger: GCCCTGTCCACCCACCTGCCATGGCCCCTGCCACAC...ACCACACCAAGGACTTATGGGGGCTGCCCAGCTGACAGAGGAGGTTCTGTTCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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| CDS-3UTR TCA 90 bp | CTCCTCTGTCAGCTGGGCAGCCCCCATAAGTCCTTGGTGTGGTCTCAGCCATGTTTGGCCTGCAAGACCTaGCTCTGCCAGGGCTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: LLCQLGSPHKSLVWSQPCLACKT*LCQGCW Trigger: CCAACAGCCCTGGCAGAGTCAGGTCTTGCAGGCCAA...ACATGGCTGAGACCACACCAAGGACTTATGGGGGCTGCCCAGCTGACAGAGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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| CDS-3UTR GCA 90 bp | CTCCTCTGTCAGCTGGGCAGCCCCCATAAGTCCTTGGTGTGGTCTCAGCCATGTAAGCTTCCAGGAATGTaGGGCGCCGGGGAAAGAGCG | + |
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Preference number: 4 (lower is better) Translates to: LLCQLGSPHKSLVWSQPCKLPGM*GAGERA Trigger: CGCTCTTTCCCCGGCGCCGCACATTCCTGGAAGCTT...ACATGGCTGAGACCACACCAAGGACTTATGGGGGCTGCCCAGCTGACAGAGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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| CDS-3UTR TCA 90 bp | GTCCTGGAGTCCTGGTGTGTCCTTTGCCATGGATGCTGGGCTCAAAGAACAGAACTCCCGTGGTCCATATaGAGCCCCGCAGTGGGCGCT | + |
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Preference number: 4 (lower is better) Translates to: VLESWCVLCHGCWAQRTELPWSI*SPAVGA Trigger: AGCGCCCACTGCGGGGCTTCATATGGACCACGGGAG...TTCTGTTCTTTGAGCCCAGCATCCATGGCAAAGGACACACCAGGACTCCAGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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| CDS-3UTR GCA 90 bp | ATGTGTCCAAAGCAAGTCCTTTTCTTCTATCCCACAAAGGGGCATCTGCACCCCAGAGCGCGTAGCAGCTaGTGGGGCCGCACGCGGCTC | + |
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Preference number: 4 (lower is better) Translates to: MCPKQVLFFYPTKGHLHPRARSS*WGRTRL Trigger: GAGCCGCGTGCGGCCCCAGCAGCTGCTACGCGCTCT...GGGGTGCAGATGCCCCTTTGTGGGATAGAAGAAAAGGACTTGCTTTGGACACAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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| CDS-3UTR GCA 90 bp | TGGCACCCCATTTATTGGAGAAGATCCCAGCACCCACCCCTTGAGGTCCTGGAGGACGGAAGCCTTCACTaGAGCGGCAGGACACAGCAC | + |
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Preference number: 4 (lower is better) Translates to: WHPIYWRRSQHPPLEVLEDGSLH*SGRTQH Trigger: GTGCTGTGTCCTGCCGCTGCAGTGAAGGCTTCCGTC...CTCCAGGACCTCAAGGGGTGGGTGCTGGGATCTTCTCCAATAAATGGGGTGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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| CDS-3UTR GCA 90 bp | CAGACCCTTCCCTCAGGCATCAGTGGGGATGATGAACTTTGGGTGAGGTTGGCATGTTGGCACCAGGAGTaGCACCAGCAGCCAGCGGTC | + |
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Preference number: 4 (lower is better) Translates to: QTLPSGISGDDELWVRLACWHQE*HQQPAV Trigger: GACCGCTGGCTGCTGGTGGCACTCCTGGTGCCAACA...TGCCAACCTCACCCAAAGTTCATCATCCCCACTGATGCCTGAGGGAAGGGTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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| CDS-3UTR CCA 90 bp | GAGTCCTGGTGTGTCCTTTGCCATGGATGCTGGGCTCAAAGAACAGAACCTCCTTGCACAGCGCTGGGCTaGGCAGGGTCCTTCCGTAGC | + |
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Preference number: 4 (lower is better) Translates to: ESWCVLCHGCWAQRTEPPCTALG*AGSFRS Trigger: GCTACGGAAGGACCCTGCCCAGCCCAGCGCTGTGCA...AGGAGGTTCTGTTCTTTGAGCCCAGCATCCATGGCAAAGGACACACCAGGACTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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| CDS-3UTR CCA 90 bp | AGCTGGGCAGCCCCCATAAGTCCTTGGTGTGGTCTCAGCCATGTGTCCAAAGCAAGATCCTGGGAAGCCTaGGCACCCATGGCTCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: SWAAPISPWCGLSHVSKARSWEA*APMAPA Trigger: TGCAGGAGCCATGGGTGCCCAGGCTTCCCAGGATCT...TGCTTTGGACACATGGCTGAGACCACACCAAGGACTTATGGGGGCTGCCCAGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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| CDS-3UTR CCA 90 bp | AGATCCCAGCACCCACCCCTTGAGGTCCTGGAGTCCTGGTGTGTCCTTTGCCATGTAGTGTGGGTCGAGTaGCAGAGATCACCATGGGCC | + |
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Preference number: 4 (lower is better) Translates to: RSQHPPLEVLESWCVLCHVVWVE*QRSPWA Trigger: GGCCCATGGTGATCTCTGCCACTCGACCCACACTAC...ATGGCAAAGGACACACCAGGACTCCAGGACCTCAAGGGGTGGGTGCTGGGATCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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| CDS-3UTR TCA 90 bp | GAGGTTGGCACCCCATTTATTGGAGAAGATCCCAGCACCCACCCCTTGAGGTCCCCAGCAACTCATCTCTaGGATCCTGGGAAGCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: EVGTPFIGEDPSTHPLRSPATHL*DPGKPG Trigger: CCCAGGCTTCCCAGGATCTCAGAGATGAGTTGCTGG...GGACCTCAAGGGGTGGGTGCTGGGATCTTCTCCAATAAATGGGGTGCCAACCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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| CDS-3UTR TCA 90 bp | CTGGTGTGTCCTTTGCCATGGATGCTGGGCTCAAAGAACAGAACCTCCTCTGTCGGAGACCGTGCTGGGTaGGTGGCCGAGGTTATCCCA | + |
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Preference number: 4 (lower is better) Translates to: LVCPLPWMLGSKNRTSSVGDRAG*VAEVIP Trigger: TGGGATAACCTCGGCCACTCACCCAGCACGGTCTCC...GACAGAGGAGGTTCTGTTCTTTGAGCCCAGCATCCATGGCAAAGGACACACCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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| CDS-3UTR TCA 90 bp | GAGGTTGGCACCCCATTTATTGGAGAAGATCCCAGCACCCACCCCTTGAGGTCCTGTTCCCAGCATGTGTaGCCCAGCGATAGCAGTCCG | + |
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Preference number: 4 (lower is better) Translates to: EVGTPFIGEDPSTHPLRSCSQHV*PSDSSP Trigger: CGGACTGCTATCGCTGGGTCACACATGCTGGGAACA...GGACCTCAAGGGGTGGGTGCTGGGATCTTCTCCAATAAATGGGGTGCCAACCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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| CDS-3UTR GCA 90 bp | AGATCCCAGCACCCACCCCTTGAGGTCCTGGAGTCCTGGTGTGTCCTTTGCCATGTTCCTCTGTCCAGGTaGCATCAAAGTCCTCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: RSQHPPLEVLESWCVLCHVPLSR*HQSPPR Trigger: CCTGGGAGGACTTTGATGGCACCTGGACAGAGGAAC...ATGGCAAAGGACACACCAGGACTCCAGGACCTCAAGGGGTGGGTGCTGGGATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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| CDS-3UTR GCA 90 bp | ATTGGAGAAGATCCCAGCACCCACCCCTTGAGGTCCTGGAGTCCTGGTGTGTCCGAGTGCAGTACACAATaGCCAGGGCAAGCAGCACCA | + |
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Preference number: 4 (lower is better) Translates to: IGEDPSTHPLRSWSPGVSECSTQ*PGQAAP Trigger: TGGTGCTGCTTGCCCTGGGCATTGTGTACTGCACTC...GGACACACCAGGACTCCAGGACCTCAAGGGGTGGGTGCTGGGATCTTCTCCAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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| CDS-3UTR CCA 90 bp | ATGTGTCCAAAGCAAGTCCTTTTCTTCTATCCCACAAAGGGGCATCTGCACCCCAGGCTGTCCACACGCTaGGCCTCCTCTGGGGTCCGC | + |
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Preference number: 4 (lower is better) Translates to: MCPKQVLFFYPTKGHLHPRLSTR*ASSGVR Trigger: GCGGACCCCAGAGGAGGCCCAGCGTGTGGACAGCCT...GGGGTGCAGATGCCCCTTTGTGGGATAGAAGAAAAGGACTTGCTTTGGACACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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| CDS-3UTR CCA 90 bp | CTGGTGTGTCCTTTGCCATGGATGCTGGGCTCAAAGAACAGAACCTCCTCTGTCAGCGATGCTCTCCGCTaGCCTCAAGGGCTGCACAGC | + |
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Preference number: 4 (lower is better) Translates to: LVCPLPWMLGSKNRTSSVSDALR*PQGLHS Trigger: GCTGTGCAGCCCTTGAGGCCAGCGGAGAGCATCGCT...GACAGAGGAGGTTCTGTTCTTTGAGCCCAGCATCCATGGCAAAGGACACACCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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| CDS-3UTR CCA 90 bp | TGGAGTCCTGGTGTGTCCTTTGCCATGGATGCTGGGCTCAAAGAACAGAACCTCCGCTTGTTGGGTGCGTaGGAGCCACAGCGAGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: WSPGVSFAMDAGLKEQNLRLLGA*EPQRVQ Trigger: CTGCACTCGCTGTGGCTCCCACGCACCCAACAAGCG...GAGGTTCTGTTCTTTGAGCCCAGCATCCATGGCAAAGGACACACCAGGACTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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| CDS-3UTR TCA 90 bp | AGATCCCAGCACCCACCCCTTGAGGTCCTGGAGTCCTGGTGTGTCCTTTGCCATTGTAGGGCTGATAGATaGGGTCTGGTTAGTGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: RSQHPPLEVLESWCVLCHCRADR*GLVSGP Trigger: AGGCCCACTAACCAGACCTCATCTATCAGCCCTACA...ATGGCAAAGGACACACCAGGACTCCAGGACCTCAAGGGGTGGGTGCTGGGATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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| CDS-3UTR GCA 90 bp | AGTCCTGGTGTGTCCTTTGCCATGGATGCTGGGCTCAAAGAACAGAACCTCCTCCATCGACAGCCAGTGTaGACGAGCCTTCGAGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: SPGVSFAMDAGLKEQNLLHRQPV*TSLRAS Trigger: GCTGGCTCGAAGGCTCGTGCACACTGGCTGTCGATG...GAGGAGGTTCTGTTCTTTGAGCCCAGCATCCATGGCAAAGGACACACCAGGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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| CDS-3UTR GCA 90 bp | GAGTCCTGGTGTGTCCTTTGCCATGGATGCTGGGCTCAAAGAACAGAACCTCCTGCAGAGAAGCTCCCCTaGCAGCTTGGCACTGCACAG | + |
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Preference number: 4 (lower is better) Translates to: ESWCVLCHGCWAQRTEPPAEKLP*QLGTAQ Trigger: CTGTGCAGTGCCAAGCTGGCAGGGGAGCTTCTCTGC...AGGAGGTTCTGTTCTTTGAGCCCAGCATCCATGGCAAAGGACACACCAGGACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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| CDS-3UTR GCA 90 bp | CCCTCAGGCATCAGTGGGGATGATGAACTTTGGGTGAGGTTGGCACCCCATTTAGGCACCCATGGCTCCTaGAGGGCTACAGCTGATACC | + |
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Preference number: 4 (lower is better) Translates to: PSGISGDDELWVRLAPHLGTHGS*RATADT Trigger: GGTATCAGCTGTAGCCCTGCAGGAGCCATGGGTGCC...TAAATGGGGTGCCAACCTCACCCAAAGTTCATCATCCCCACTGATGCCTGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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| CDS-3UTR CCA 90 bp | GAGGTTGGCACCCCATTTATTGGAGAAGATCCCAGCACCCACCCCTTGAGGTCCCACACACCAGCAATCTaGCACTCATCCGTGTCCACG | + |
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Preference number: 4 (lower is better) Translates to: EVGTPFIGEDPSTHPLRSHTPAI*HSSVST Trigger: CGTGGACACGGATGAGTGCCAGATTGCTGGTGTGTG...GGACCTCAAGGGGTGGGTGCTGGGATCTTCTCCAATAAATGGGGTGCCAACCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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| CDS-3UTR CCA 90 bp | AGATCCCAGCACCCACCCCTTGAGGTCCTGGAGTCCTGGTGTGTCCTTTGCCATGTTATCCCAGGCTTGTaGCCAAAAGGCAGGTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: RSQHPPLEVLESWCVLCHVIPGL*PKGRSG Trigger: TCCAGACCTGCCTTTTGGCCACAAGCCTGGGATAAC...ATGGCAAAGGACACACCAGGACTCCAGGACCTCAAGGGGTGGGTGCTGGGATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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| CDS-3UTR CCA 90 bp | CTCTGTCAGCTGGGCAGCCCCCATAAGTCCTTGGTGTGGTCTCAGCCATGTGTCGATAGTGTGGGTATCTaGAGACATAGGGGCCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: LCQLGSPHKSLVWSQPCVDSVGI*RHRGLV Trigger: CACCAGGCCCCTATGTCTCCAGATACCCACACTATC...GACACATGGCTGAGACCACACCAAGGACTTATGGGGGCTGCCCAGCTGACAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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| CDS-3UTR CCA 90 bp | TCTGTCAGCTGGGCAGCCCCCATAAGTCCTTGGTGTGGTCTCAGCCATGTGTCCCTGGGTTCTGATACCTaGAGCATCTGGGAGCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SVSWAAPISPWCGLSHVSLGSDT*SIWEQR Trigger: CCTTTGCTCCCAGATGCTCCAGGTATCAGAACCCAG...GGACACATGGCTGAGACCACACCAAGGACTTATGGGGGCTGCCCAGCTGACAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS-3UTR TCA 90 bp | GCCATGTGTCCAAAGCAAGTCCTTTTCTTCTATCCCACAAAGGGGCATCTGCACCCAGCCCACGCCACCTaGAGGCTGTTTCACGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: AMCPKQVLFFYPTKGHLHPAHAT*RLFHAQ Trigger: CTGTGCGTGAAACAGCCTTCAGGTGGCGTGGGCTGG...GTGCAGATGCCCCTTTGTGGGATAGAAGAAAAGGACTTGCTTTGGACACATGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS-3UTR TCA 90 bp | AAGAACAGAACCTCCTCTGTCAGCTGGGCAGCCCCCATAAGTCCTTGGTGTGGTGGGCATGGGTTCTGTTaGGCTCTTGTTCCCAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: KNRTSSVSWAAPISPWCGGHGFC*ALVPSM Trigger: CATGCTGGGAACAAGAGCTCAACAGAACCCATGCCC...ACCACACCAAGGACTTATGGGGGCTGCCCAGCTGACAGAGGAGGTTCTGTTCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS-3UTR CCA 90 bp | TGGAGTCCTGGTGTGTCCTTTGCCATGGATGCTGGGCTCAAAGAACAGAACCTCTGGATCATCCTCAGCTaGCCGGAAGCCAAGGCGACA | + |
|
Preference number: 4 (lower is better) Translates to: WSPGVSFAMDAGLKEQNLWIILS*PEAKAT Trigger: TGTCGCCTTGGCTTCCGGCCAGCTGAGGATGATCCA...GAGGTTCTGTTCTTTGAGCCCAGCATCCATGGCAAAGGACACACCAGGACTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS-3UTR CCA 90 bp | TCAGGCATCAGTGGGGATGATGAACTTTGGGTGAGGTTGGCACCCCATTTATTGAAGCCTGGGCACCCATaGCTCCTGCAGGGCTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: SGISGDDELWVRLAPHLLKPGHP*LLQGYS Trigger: GCTGTAGCCCTGCAGGAGCCATGGGTGCCCAGGCTT...CAATAAATGGGGTGCCAACCTCACCCAAAGTTCATCATCCCCACTGATGCCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS-3UTR CCA 90 bp | ATGTGTCCAAAGCAAGTCCTTTTCTTCTATCCCACAAAGGGGCATCTGCACCCCACACAGCTGGAGGTGTaGCAGGGGCCATGGCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: MCPKQVLFFYPTKGHLHPTQLEV*QGPWQV Trigger: CACCTGCCATGGCCCCTGCCACACCTCCAGCTGTGT...GGGGTGCAGATGCCCCTTTGTGGGATAGAAGAAAAGGACTTGCTTTGGACACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS-3UTR CCA 90 bp | TCTGTCAGCTGGGCAGCCCCCATAAGTCCTTGGTGTGGTCTCAGCCATGTGTCCGATACCTGGAGCATCTaGGAGCAAAGGGTGTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: SVSWAAPISPWCGLSHVSDTWSI*EQRVLM Trigger: CATCAACACCCTTTGCTCCCAGATGCTCCAGGTATC...GGACACATGGCTGAGACCACACCAAGGACTTATGGGGGCTGCCCAGCTGACAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS-3UTR CCA 90 bp | GCCCCCATAAGTCCTTGGTGTGGTCTCAGCCATGTGTCCAAAGCAAGTCCTTTTAGAAGAAGGGAAGGCTaGGGGCTGGTTGGCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: APISPWCGLSHVSKASPFRRREG*GLVGSR Trigger: CCTGCTGCCAACCAGCCCCCAGCCTTCCCTTCTTCT...AAAAGGACTTGCTTTGGACACATGGCTGAGACCACACCAAGGACTTATGGGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS-3UTR TCA 90 bp | GTCCTGGTGTGTCCTTTGCCATGGATGCTGGGCTCAAAGAACAGAACCTCCTCTCGCTGGAAACCAGGTTaGAGGGTGTGGTGTAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: VLVCPLPWMLGSKNRTSSRWKPG*RVWCRQ Trigger: CTGTCTACACCACACCCTTCAACCTGGTTTCCAGCG...AGAGGAGGTTCTGTTCTTTGAGCCCAGCATCCATGGCAAAGGACACACCAGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS-3UTR TCA 90 bp | TGGCACCCCATTTATTGGAGAAGATCCCAGCACCCACCCCTTGAGGTCCTGGAGGGGAGCAAAGGGTGTTaGTGGGCTTTAGAAGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: WHPIYWRRSQHPPLEVLEGSKGC*WALEVV Trigger: TACCACTTCTAAAGCCCATCAACACCCTTTGCTCCC...CTCCAGGACCTCAAGGGGTGGGTGCTGGGATCTTCTCCAATAAATGGGGTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS-3UTR GCA 90 bp | GCCATGTGTCCAAAGCAAGTCCTTTTCTTCTATCCCACAAAGGGGCATCTGCACTTGGCACTGCACAGCTaGCACGGAGCCAAAGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AMCPKQVLFFYPTKGHLHLALHS*HGAKGQ Trigger: CTGCCCTTTGGCTCCGTGGCAGCTGTGCAGTGCCAA...GTGCAGATGCCCCTTTGTGGGATAGAAGAAAAGGACTTGCTTTGGACACATGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS-3UTR GCA 90 bp | TGGAGTCCTGGTGTGTCCTTTGCCATGGATGCTGGGCTCAAAGAACAGAACCTCGGGTCTTCACAACTGTaGCCATCTGCTGCTAGACGG | + |
|
Preference number: 4 (lower is better) Translates to: WSPGVSFAMDAGLKEQNLGSSQL*PSAARR Trigger: CCGTCTAGCAGCAGATGGGCACAGTTGTGAAGACCC...GAGGTTCTGTTCTTTGAGCCCAGCATCCATGGCAAAGGACACACCAGGACTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS-3UTR CCA 90 bp | TGGAGTCCTGGTGTGTCCTTTGCCATGGATGCTGGGCTCAAAGAACAGAACCTCAGGCTCTCCATCCTGTaGGAAGTTGGGCCTATAGGG | + |
|
Preference number: 4 (lower is better) Translates to: WSPGVSFAMDAGLKEQNLRLSIL*EVGPIG Trigger: CCCTATAGGCCCAACTTCCCACAGGATGGAGAGCCT...GAGGTTCTGTTCTTTGAGCCCAGCATCCATGGCAAAGGACACACCAGGACTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS-3UTR CCA 90 bp | TGGAGTCCTGGTGTGTCCTTTGCCATGGATGCTGGGCTCAAAGAACAGAACCTCGCTGAGACAGAAAGCTaGGGGGCCTGGGTTCTGATA | + |
|
Preference number: 4 (lower is better) Translates to: WSPGVSFAMDAGLKEQNLAETES*GAWVLI Trigger: TATCAGAACCCAGGCCCCCCAGCTTTCTGTCTCAGC...GAGGTTCTGTTCTTTGAGCCCAGCATCCATGGCAAAGGACACACCAGGACTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS-3UTR TCA 90 bp | TTGGGTGAGGTTGGCACCCCATTTATTGGAGAAGATCCCAGCACCCACCCCTTGAGCCACCAACATAGTTaGCACACATCTGCTGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: LGEVGTPFIGEDPSTHPLSHQHS*HTSAGT Trigger: TGTGCCAGCAGATGTGTGTCAACTATGTTGGTGGCT...CAAGGGGTGGGTGCTGGGATCTTCTCCAATAAATGGGGTGCCAACCTCACCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS-3UTR TCA 90 bp | TCAGGCATCAGTGGGGATGATGAACTTTGGGTGAGGTTGGCACCCCATTTATTGAGCGATAGCAGTCCGTaGTCCGCTTGTTGGGTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: SGISGDDELWVRLAPHLLSDSSP*SACWVR Trigger: ACGCACCCAACAAGCGGATCACGGACTGCTATCGCT...CAATAAATGGGGTGCCAACCTCACCCAAAGTTCATCATCCCCACTGATGCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS-3UTR GCA 90 bp | GAGGTTGGCACCCCATTTATTGGAGAAGATCCCAGCACCCACCCCTTGAGGTCCATTTTGGGGATCTGGTaGTCAGAGAACACAGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: EVGTPFIGEDPSTHPLRSILGIW*SENTAG Trigger: TCCAGCTGTGTTCTCTGAGCACCAGATCCCCAAAAT...GGACCTCAAGGGGTGGGTGCTGGGATCTTCTCCAATAAATGGGGTGCCAACCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS-3UTR CCA 90 bp | GCCCCCATAAGTCCTTGGTGTGGTCTCAGCCATGTGTCCAAAGCAAGTCCTTTTCAGGCCAAAGTCAGGTaGATGTGTAGGTGCCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: APISPWCGLSHVSKASPFQAKVR*MCRCQP Trigger: TGGCTGGCACCTACACATCCACCTGACTTTGGCCTG...AAAAGGACTTGCTTTGGACACATGGCTGAGACCACACCAAGGACTTATGGGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS-3UTR CCA 90 bp | GCCATGTGTCCAAAGCAAGTCCTTTTCTTCTATCCCACAAAGGGGCATCTGCACTCACCATGGGCCGTGTaGCAGACACCACTGAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: AMCPKQVLFFYPTKGHLHSPWAV*QTPLRS Trigger: ACTCCTCAGTGGTGTCTGCCACACGGCCCATGGTGA...GTGCAGATGCCCCTTTGTGGGATAGAAGAAAAGGACTTGCTTTGGACACATGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| 3UTR CAA 72 bp | TCAGGCATCAGTGGGGATGATGAACTTTGGGTGAGGTaGGCACCCCATTTATTGGAGAAGATCCCAGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: SGISGDDELWVR*APHLLEKIPAP Trigger: GGGTGCTGGGATCTTCTCCAATAAATGGGGTGCCAACCTCACCCAAAGTTCATCATCCCCACTGATGCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS-3UTR TCA 90 bp | TGTGTCCTTTGCCATGGATGCTGGGCTCAAAGAACAGAACCTCCTCTGTCAGCTGGGTGGGCGTGTAGCTaGAATAACAGAGGTCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: CVLCHGCWAQRTEPPLSAGWACS*NNRGLV Trigger: CACAAGACCTCTGTTATTTCAGCTACACGCCCACCC...AGCTGACAGAGGAGGTTCTGTTCTTTGAGCCCAGCATCCATGGCAAAGGACACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS-3UTR CCA 90 bp | TCAGGCATCAGTGGGGATGATGAACTTTGGGTGAGGTTGGCACCCCATTTATTGTCATCTCTGAGATCCTaGGAAGCCTGGGCACCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SGISGDDELWVRLAPHLLSSLRS*EAWAPM Trigger: CATGGGTGCCCAGGCTTCCCAGGATCTCAGAGATGA...CAATAAATGGGGTGCCAACCTCACCCAAAGTTCATCATCCCCACTGATGCCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS-3UTR CCA 90 bp | CAGACCCTTCCCTCAGGCATCAGTGGGGATGATGAACTTTGGGTGAGGTTGGCAATAACAGAGGTCTTGTaGGCAGAAGGTAGTGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QTLPSGISGDDELWVRLAITEVL*AEGSVG Trigger: ACCCACACTACCTTCTGCCCACAAGACCTCTGTTAT...TGCCAACCTCACCCAAAGTTCATCATCCCCACTGATGCCTGAGGGAAGGGTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS-3UTR CCA 90 bp | ATGTGTCCAAAGCAAGTCCTTTTCTTCTATCCCACAAAGGGGCATCTGCACCCCGTAGGAAGAGGGGGCTaGAGAGCTGAGACAGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: MCPKQVLFFYPTKGHLHPVGRGG*RAETES Trigger: GCTTTCTGTCTCAGCTCTCCAGCCCCCTCTTCCTAC...GGGGTGCAGATGCCCCTTTGTGGGATAGAAGAAAAGGACTTGCTTTGGACACAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS-3UTR CCA 90 bp | GAGTCCTGGTGTGTCCTTTGCCATGGATGCTGGGCTCAAAGAACAGAACCTCCTTCATCCCTTTGGCTTTaGCCTGCAAGACCTGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: ESWCVLCHGCWAQRTEPPSSLWL*PARPDS Trigger: AGAGTCAGGTCTTGCAGGCCAAAGCCAAAGGGATGA...AGGAGGTTCTGTTCTTTGAGCCCAGCATCCATGGCAAAGGACACACCAGGACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS-3UTR CCA 90 bp | TGGAGTCCTGGTGTGTCCTTTGCCATGGATGCTGGGCTCAAAGAACAGAACCTCTTGATTTTGGGGATCTaGTGCTCAGAGAACACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: WSPGVSFAMDAGLKEQNLLILGI*CSENTA Trigger: AGCTGTGTTCTCTGAGCACCAGATCCCCAAAATCAA...GAGGTTCTGTTCTTTGAGCCCAGCATCCATGGCAAAGGACACACCAGGACTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS-3UTR TCA 90 bp | GCCATGTGTCCAAAGCAAGTCCTTTTCTTCTATCCCACAAAGGGGCATCTGCACCTGGATAATTGGCCTTaGTTTTGGGGATCTGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AMCPKQVLFFYPTKGHLHLDNWP*FWGSGA Trigger: AGCACCAGATCCCCAAAATCAAGGCCAATTATCCAG...GTGCAGATGCCCCTTTGTGGGATAGAAGAAAAGGACTTGCTTTGGACACATGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS CCA 90 bp | CTTCCAGGAATGTGCGGCGCCGGGGAAAGAGCGCGTAGCAGCTGCTaGGGCCGCACGCGGCTCGAGGCTCCGGCGTCCAGGGGACCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LPGMCGAGERARSSC*GRTRLEAPASRGPG Trigger: GCCAGGTCCCCTGGACGCCGGAGCCTCGAGCCGCGTGCGGCCCCAGCAGCTGCTACGCGCTCTTTCCCCGGCGCCGCACATTCCTGGAAG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS GCA 90 bp | AAGCCCCGCAGTGGGCGCTGCGGCTGGCATTGCCTAGCCTGCCGCTaGAACCCAATCCATAGCAGCCCGTTGGCCGGCCCGACCCCCACC | + |
|
Preference number: 5 (lower is better) Translates to: KPRSGRCGWHCLACR*NPIHSSPLAGPTPT Trigger: GGTGGGGGTCGGGCCGGCCAACGGGCTGCTATGGATTGGGTTGCAGCGGCAGGCTAGGCAATGCCAGCCGCAGCGCCCACTGCGGGGCTT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS CCA 90 bp | CCAGCGATGCTCTCCGCTGGCCTCAAGGGCTGCACAGCGCTGGGCTaGGCAGGGTCCTTCCGTAGCCGGCTGGGCCCAGTTGGTGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: PAMLSAGLKGCTALG*AGSFRSRLGPVGEG Trigger: GCCTTCACCAACTGGGCCCAGCCGGCTACGGAAGGACCCTGCCCAGCCCAGCGCTGTGCAGCCCTTGAGGCCAGCGGAGAGCATCGCTGG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS CCA 90 bp | TCGAGCCAGCGATGCTCTCCGCTGGCCTCAAGGGCTGCACAGCGCTaGGCTGGGCAGGGTCCTTCCGTAGCCGGCTGGGCCCAGTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SSQRCSPLASRAAQR*AGQGPSVAGWAQLV Trigger: CACCAACTGGGCCCAGCCGGCTACGGAAGGACCCTGCCCAGCCCAGCGCTGTGCAGCCCTTGAGGCCAGCGGAGAGCATCGCTGGCTCGA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS GCA 90 bp | TGTCCACACGCTGGGCCTCCTCTGGGGTCCGCGGTGTGGCCAGGTTaGCCCCCAATTCGCGGCACGCCCGCCAAGCTTCCAGGAATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: CPHAGPPLGSAVWPG*PPIRGTPAKLPGMC Trigger: GCACATTCCTGGAAGCTTGGCGGGCGTGCCGCGAATTGGGGGGCAACCTGGCCACACCGCGGACCCCAGAGGAGGCCCAGCGTGTGGACA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS CCA 90 bp | GGTCCTTCCGTAGCCGGCTGGGCCCAGTTGGTGAAGGCGGTGTCCTaGTCTCCCGTGGTCCATATGAAGCCCCGCAGTGGGCGCTGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: GPSVAGWAQLVKAVS*SPVVHMKPRSGRCG Trigger: GCCGCAGCGCCCACTGCGGGGCTTCATATGGACCACGGGAGACCAGGACACCGCCTTCACCAACTGGGCCCAGCCGGCTACGGAAGGACC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS GCA 90 bp | CATATGAAGCCCCGCAGTGGGCGCTGCGGCTGGCATTGCCTAGCCTaGCGCTGCAACCCAATCCATAGCAGCCCGTTGGCCGGCCCGACC | + |
|
Preference number: 5 (lower is better) Translates to: HMKPRSGRCGWHCLA*RCNPIHSSPLAGPT Trigger: GGTCGGGCCGGCCAACGGGCTGCTATGGATTGGGTTGCAGCGGCAGGCTAGGCAATGCCAGCCGCAGCGCCCACTGCGGGGCTTCATATG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS GCA 90 bp | CCCGTGGTCCATATGAAGCCCCGCAGTGGGCGCTGCGGCTGGCATTaGCTAGCCTGCCGCTGCAACCCAATCCATAGCAGCCCGTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PVVHMKPRSGRCGWH*LACRCNPIHSSPLA Trigger: GGCCAACGGGCTGCTATGGATTGGGTTGCAGCGGCAGGCTAGGCAATGCCAGCCGCAGCGCCCACTGCGGGGCTTCATATGGACCACGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS CCA 90 bp | TGGTCTCCCGTGGTCCATATGAAGCCCCGCAGTGGGCGCTGCGGCTaGCATTGCCTAGCCTGCCGCTGCAACCCAATCCATAGCAGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: WSPVVHMKPRSGRCG*HCLACRCNPIHSSP Trigger: CGGGCTGCTATGGATTGGGTTGCAGCGGCAGGCTAGGCAATGCCAGCCGCAGCGCCCACTGCGGGGCTTCATATGGACCACGGGAGACCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS CCA 90 bp | GAAGGCGGTGTCCTGGTCTCCCGTGGTCCATATGAAGCCCCGCAGTaGGCGCTGCGGCTGGCATTGCCTAGCCTGCCGCTGCAACCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: EGGVLVSRGPYEAPQ*ALRLALPSLPLQPN Trigger: ATTGGGTTGCAGCGGCAGGCTAGGCAATGCCAGCCGCAGCGCCCACTGCGGGGCTTCATATGGACCACGGGAGACCAGGACACCGCCTTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS TCA 90 bp | CACCAGCAGCCAGCGGTCATCCCTTTGGCTTTGGCCTGCAAGACCTaGCTCTGCCAGGGCTGTTGGAGCTGCTGTGGAGGGCACCGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: HQQPAVIPLALACKT*LCQGCWSCCGGHRG Trigger: CCCTCGGTGCCCTCCACAGCAGCTCCAACAGCCCTGGCAGAGTCAGGTCTTGCAGGCCAAAGCCAAAGGGATGACCGCTGGCTGCTGGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS CCA 90 bp | CCATTGTCAGGACCACAGCCAGTCCCTGGGCACAGCGGGCCAGTCTaGGACCAGCCCACGCCACCTGAAGGCTGTTTCACGCACAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: PLSGPQPVPGHSGPV*DQPTPPEGCFTHSR Trigger: TCTGCTGTGCGTGAAACAGCCTTCAGGTGGCGTGGGCTGGTCCCAGACTGGCCCGCTGTGCCCAGGGACTGGCTGTGGTCCTGACAATGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS GCA 90 bp | CACTGCTGCTCACAGGGGGCCTGGGCACAGGGGTCTTCACAACTGTaGCCATCTGCTGCTAGACGGAAGCCTTCACTGCAGCGGCAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: HCCSQGAWAQGSSQL*PSAARRKPSLQRQD Trigger: GTCCTGCCGCTGCAGTGAAGGCTTCCGTCTAGCAGCAGATGGGCACAGTTGTGAAGACCCCTGTGCCCAGGCCCCCTGTGAGCAGCAGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS CCA 90 bp | GGCACCAGGAGTGCCACCAGCAGCCAGCGGTCATCCCTTTGGCTTTaGCCTGCAAGACCTGACTCTGCCAGGGCTGTTGGAGCTGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: GTRSATSSQRSSLWL*PARPDSARAVGAAV Trigger: CACAGCAGCTCCAACAGCCCTGGCAGAGTCAGGTCTTGCAGGCCAAAGCCAAAGGGATGACCGCTGGCTGCTGGTGGCACTCCTGGTGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS GCA 90 bp | CACGCACAGCAGAGAAGCTCCCCTGCCAGCTTGGCACTGCACAGCTaGCACGGAGCCAAAGGGCAGCCATTCGAACTCGCTGGAAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: HAQQRSSPASLALHS*HGAKGQPFELAGNQ Trigger: CTGGTTTCCAGCGAGTTCGAATGGCTGCCCTTTGGCTCCGTGGCAGCTGTGCAGTGCCAAGCTGGCAGGGGAGCTTCTCTGCTGTGCGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS GCA 90 bp | GGCTGTTTCACGCACAGCAGAGAAGCTCCCCTGCCAGCTTGGCACTaGACAGCTGCCACGGAGCCAAAGGGCAGCCATTCGAACTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GCFTHSREAPLPAWH*TAATEPKGSHSNSL Trigger: CAGCGAGTTCGAATGGCTGCCCTTTGGCTCCGTGGCAGCTGTGCAGTGCCAAGCTGGCAGGGGAGCTTCTCTGCTGTGCGTGAAACAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS CCA 90 bp | GCACACACCAGCAATCTGGCACTCATCCGTGTCCACGCAGCGGTGTaGATCATCCTCAGCTGGCCGGAAGCCAAGGCGACAGTGGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: AHTSNLALIRVHAAV*IILSWPEAKATVAA Trigger: AGCTGCCACTGTCGCCTTGGCTTCCGGCCAGCTGAGGATGATCCACACCGCTGCGTGGACACGGATGAGTGCCAGATTGCTGGTGTGTGC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS GCA 90 bp | CACCCTCAAAACCAAACTGGCAGAGGTAGCCATCGACAGCCAGTGTaGACGAGCCTTCGAGCCAGCGATGCTCTCCGCTGGCCTCAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: HPQNQTGRGSHRQPV*TSLRASDALRWPQG Trigger: CCCTTGAGGCCAGCGGAGAGCATCGCTGGCTCGAAGGCTCGTGCACACTGGCTGTCGATGGCTACCTCTGCCAGTTTGGTTTTGAGGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS CCA 90 bp | TTTGGCCTGCAAGACCTGACTCTGCCAGGGCTGTTGGAGCTGCTGTaGAGGGCACCGAGGGCAGCTGTGGCACTGATTTGGGACTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: FGLQDLTLPGLLELL*RAPRAAVALIWDWE Trigger: TTCCCAGTCCCAAATCAGTGCCACAGCTGCCCTCGGTGCCCTCCACAGCAGCTCCAACAGCCCTGGCAGAGTCAGGTCTTGCAGGCCAAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS CCA 90 bp | CATGTTGGCACCAGGAGTGCCACCAGCAGCCAGCGGTCATCCCTTTaGCTTTGGCCTGCAAGACCTGACTCTGCCAGGGCTGTTGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: HVGTRSATSSQRSSL*LWPARPDSARAVGA Trigger: AGCTCCAACAGCCCTGGCAGAGTCAGGTCTTGCAGGCCAAAGCCAAAGGGATGACCGCTGGCTGCTGGTGGCACTCCTGGTGCCAACATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS TCA 90 bp | GATCCTGGGAAGCCTGGGCACCCATGGCTCCTGCAGGGCTACAGCTaGTACCATCTGCCTCAAGCTCGTGACCCTCGCTGCAGTAACACT | + |
|
Preference number: 5 (lower is better) Translates to: DPGKPGHPWLLQGYS*YHLPQARDPRCSNT Trigger: AGTGTTACTGCAGCGAGGGTCACGAGCTTGAGGCAGATGGTATCAGCTGTAGCCCTGCAGGAGCCATGGGTGCCCAGGCTTCCCAGGATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS GCA 90 bp | AGCCTGGGCACCCATGGCTCCTGCAGGGCTACAGCTGATACCATCTaGCTCAAGCTCGTGACCCTCGCTGCAGTAACACTCAAAGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: SLGTHGSCRATADTI*LKLVTLAAVTLKAT Trigger: GGTGGCTTTGAGTGTTACTGCAGCGAGGGTCACGAGCTTGAGGCAGATGGTATCAGCTGTAGCCCTGCAGGAGCCATGGGTGCCCAGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS GCA 90 bp | AGCATGTGTGACCCAGCGATAGCAGTCCGTGATCCGCTTGTTGGGTaGGTGGGAGCCACAGCGAGTGCAGTACACAATGCCCAGGGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SMCDPAIAVRDPLVG*VGATASAVHNAQGK Trigger: CTTGCCCTGGGCATTGTGTACTGCACTCGCTGTGGCTCCCACGCACCCAACAAGCGGATCACGGACTGCTATCGCTGGGTCACACATGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS CCA 90 bp | CTGGAGTTGGTAGGAAGAGGGGGCTGGAGAGCTGAGACAGAAAGCTaGGGGGCCTGGGTTCTGATACCTGGAGCATCTGGGAGCAAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LELVGRGGWRAETES*GAWVLIPGASGSKG Trigger: CCCTTTGCTCCCAGATGCTCCAGGTATCAGAACCCAGGCCCCCCAGCTTTCTGTCTCAGCTCTCCAGCCCCCTCTTCCTACCAACTCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS CCA 90 bp | TTGGAGCTGCTGTGGAGGGCACCGAGGGCAGCTGTGGCACTGATTTaGGACTGGGAACTCCTTCCCTTGGGACTAGAGGGGCTCTGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LELLWRAPRAAVALI*DWELLPLGLEGLWN Trigger: ATTCCAGAGCCCCTCTAGTCCCAAGGGAAGGAGTTCCCAGTCCCAAATCAGTGCCACAGCTGCCCTCGGTGCCCTCCACAGCAGCTCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS-3UTR CAA 90 bp | TGGAGTCCTGGTGTGTCCTTTGCCATGGATGCTGGGCTCAAAGAACAGAACCTCGCGCTGCGGCTGGCATaGCCTAGCCTGCCGCTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: WSPGVSFAMDAGLKEQNLALRLA*PSLPLQ Trigger: TTGCAGCGGCAGGCTAGGCAATGCCAGCCGCAGCGC...GAGGTTCTGTTCTTTGAGCCCAGCATCCATGGCAAAGGACACACCAGGACTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS GCA 90 bp | TCCGCTTGTTGGGTGCGTGGGAGCCACAGCGAGTGCAGTACACAATaGCCAGGGCAAGCAGCACCACCAAGAAGACACATGTTGGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: SACWVRGSHSECSTQ*PGQAAPPRRHMLAP Trigger: TGGTGCCAACATGTGTCTTCTTGGTGGTGCTGCTTGCCCTGGGCATTGTGTACTGCACTCGCTGTGGCTCCCACGCACCCAACAAGCGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS CCA 90 bp | CTGCTGTGGAGGGCACCGAGGGCAGCTGTGGCACTGATTTGGGACTaGGAACTCCTTCCCTTGGGACTAGAGGGGCTCTGGAATAGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LLWRAPRAAVALIWD*ELLPLGLEGLWNRN Trigger: ATTCCTATTCCAGAGCCCCTCTAGTCCCAAGGGAAGGAGTTCCCAGTCCCAAATCAGTGCCACAGCTGCCCTCGGTGCCCTCCACAGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS CCA 90 bp | ACAGGGCTCAGGGGTGGGCGTGTAGCTGAAATAACAGAGGTCTTGTaGGCAGAAGGTAGTGTGGGTCGAGTGGCAGAGATCACCATGGGC | + |
|
Preference number: 5 (lower is better) Translates to: TGLRGGRVAEITEVL*AEGSVGRVAEITMG Trigger: GCCCATGGTGATCTCTGCCACTCGACCCACACTACCTTCTGCCCACAAGACCTCTGTTATTTCAGCTACACGCCCACCCCTGAGCCCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS-3UTR CAA 90 bp | ATTGGAGAAGATCCCAGCACCCACCCCTTGAGGTCCTGGAGTCCTGGTGTGTCCGAGGTTATCCCAGGCTaGTGGCCAAAAGGCAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: IGEDPSTHPLRSWSPGVSEVIPG*WPKGRS Trigger: AGACCTGCCTTTTGGCCACAAGCCTGGGATAACCTC...GGACACACCAGGACTCCAGGACCTCAAGGGGTGGGTGCTGGGATCTTCTCCAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS-3UTR CAA 90 bp | ACCTCCTCTGTCAGCTGGGCAGCCCCCATAAGTCCTTGGTGTGGTCTCAGCCATGGGGCATGGGTTCTGTaGAGCTCTTGTTCCCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: TSSVSWAAPISPWCGLSHGAWVL*SSCSQH Trigger: ATGCTGGGAACAAGAGCTCAACAGAACCCATGCCCC...ATGGCTGAGACCACACCAAGGACTTATGGGGGCTGCCCAGCTGACAGAGGAGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS-3UTR CAA 90 bp | TGGCACCCCATTTATTGGAGAAGATCCCAGCACCCACCCCTTGAGGTCCTGGAGCCAAGAAGACACATGTaGGCACCAGGAGTGCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: WHPIYWRRSQHPPLEVLEPRRHM*APGVPP Trigger: TGGTGGCACTCCTGGTGCCAACATGTGTCTTCTTGG...CTCCAGGACCTCAAGGGGTGGGTGCTGGGATCTTCTCCAATAAATGGGGTGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS TCA 90 bp | GCTCGTGACCCTCGCTGCAGTAACACTCAAAGCCACCAACATAGTTaGCACACATCTGCTGGCACACACCAGCAATCTGGCACTCATCCG | + |
|
Preference number: 5 (lower is better) Translates to: ARDPRCSNTQSHQHS*HTSAGTHQQSGTHP Trigger: CGGATGAGTGCCAGATTGCTGGTGTGTGCCAGCAGATGTGTGTCAACTATGTTGGTGGCTTTGAGTGTTACTGCAGCGAGGGTCACGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS GCA 72 bp | GGAATGTGCGGCGCCGGGGAAAGAGCGCGTAGCAGCTaGTGGGGCCGCACGCGGCTCGAGGCTCCGGCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: GMCGAGERARSS*WGRTRLEAPAS Trigger: GGACGCCGGAGCCTCGAGCCGCGTGCGGCCCCAGCAGCTGCTACGCGCTCTTTCCCCGGCGCCGCACATTCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS CCA 72 bp | ATGTGCGGCGCCGGGGAAAGAGCGCGTAGCAGCTGCTaGGGCCGCACGCGGCTCGAGGCTCCGGCGTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: MCGAGERARSSC*GRTRLEAPASR Trigger: CCTGGACGCCGGAGCCTCGAGCCGCGTGCGGCCCCAGCAGCTGCTACGCGCTCTTTCCCCGGCGCCGCACAT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS GCA 72 bp | GCTGGGCCTCCTCTGGGGTCCGCGGTGTGGCCAGGTTaGCCCCCAATTCGCGGCACGCCCGCCAAGCTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: AGPPLGSAVWPG*PPIRGTPAKLP Trigger: TGGAAGCTTGGCGGGCGTGCCGCGAATTGGGGGGCAACCTGGCCACACCGCGGACCCCAGAGGAGGCCCAGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS CCA 72 bp | CAGCGCTGGGCTGGGCAGGGTCCTTCCGTAGCCGGCTaGGCCCAGTTGGTGAAGGCGGTGTCCTGGTCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: QRWAGQGPSVAG*AQLVKAVSWSP Trigger: GGGAGACCAGGACACCGCCTTCACCAACTGGGCCCAGCCGGCTACGGAAGGACCCTGCCCAGCCCAGCGCTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS CCA 72 bp | CTCTCCGCTGGCCTCAAGGGCTGCACAGCGCTGGGCTaGGCAGGGTCCTTCCGTAGCCGGCTGGGCCCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: LSAGLKGCTALG*AGSFRSRLGPV Trigger: AACTGGGCCCAGCCGGCTACGGAAGGACCCTGCCCAGCCCAGCGCTGTGCAGCCCTTGAGGCCAGCGGAGAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS CAA 90 bp | TGGCATTGCCTAGCCTGCCGCTGCAACCCAATCCATAGCAGCCCGTaGGCCGGCCCGACCCCCACCAGGCTGTCCACACGCTGGGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: WHCLACRCNPIHSSP*AGPTPTRLSTRWAS Trigger: GGAGGCCCAGCGTGTGGACAGCCTGGTGGGGGTCGGGCCGGCCAACGGGCTGCTATGGATTGGGTTGCAGCGGCAGGCTAGGCAATGCCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS GCA 72 bp | AGTGGGCGCTGCGGCTGGCATTGCCTAGCCTGCCGCTaGAACCCAATCCATAGCAGCCCGTTGGCCGGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: SGRCGWHCLACR*NPIHSSPLAGP Trigger: CGGGCCGGCCAACGGGCTGCTATGGATTGGGTTGCAGCGGCAGGCTAGGCAATGCCAGCCGCAGCGCCCACT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS GCA 72 bp | CCCCGCAGTGGGCGCTGCGGCTGGCATTGCCTAGCCTaGCGCTGCAACCCAATCCATAGCAGCCCGTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PRSGRCGWHCLA*RCNPIHSSPLA Trigger: GGCCAACGGGCTGCTATGGATTGGGTTGCAGCGGCAGGCTAGGCAATGCCAGCCGCAGCGCCCACTGCGGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS CAA 72 bp | CTAGCCTGCCGCTGCAACCCAATCCATAGCAGCCCGTaGGCCGGCCCGACCCCCACCAGGCTGTCCACACGC | + |
|
Preference number: 6 (lower is better) Translates to: LACRCNPIHSSP*AGPTPTRLSTR Trigger: GCGTGTGGACAGCCTGGTGGGGGTCGGGCCGGCCAACGGGCTGCTATGGATTGGGTTGCAGCGGCAGGCTAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS CAA 90 bp | CAGCGCTGGGCTGGGCAGGGTCCTTCCGTAGCCGGCTGGGCCCAGTaGGTGAAGGCGGTGTCCTGGTCTCCCGTGGTCCATATGAAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: QRWAGQGPSVAGWAQ*VKAVSWSPVVHMKP Trigger: GGGCTTCATATGGACCACGGGAGACCAGGACACCGCCTTCACCAACTGGGCCCAGCCGGCTACGGAAGGACCCTGCCCAGCCCAGCGCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS CCA 72 bp | GTCCTGGTCTCCCGTGGTCCATATGAAGCCCCGCAGTaGGCGCTGCGGCTGGCATTGCCTAGCCTGCCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: VLVSRGPYEAPQ*ALRLALPSLPL Trigger: CAGCGGCAGGCTAGGCAATGCCAGCCGCAGCGCCCACTGCGGGGCTTCATATGGACCACGGGAGACCAGGAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS CCA 72 bp | TTCGCAACCCCCATTGTCAGGACCACAGCCAGTCCCTaGGCACAGCGGGCCAGTCTGGGACCAGCCCACGCC | + |
|
Preference number: 6 (lower is better) Translates to: FATPIVRTTASP*AQRASLGPAHA Trigger: GGCGTGGGCTGGTCCCAGACTGGCCCGCTGTGCCCAGGGACTGGCTGTGGTCCTGACAATGGGGGTTGCGAA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS GCA 72 bp | TCTCCCGTGGTCCATATGAAGCCCCGCAGTGGGCGCTaGGGCTGGCATTGCCTAGCCTGCCGCTGCAACCCA | + |
|
Preference number: 6 (lower is better) Translates to: SPVVHMKPRSGR*GWHCLACRCNP Trigger: TGGGTTGCAGCGGCAGGCTAGGCAATGCCAGCCGCAGCGCCCACTGCGGGGCTTCATATGGACCACGGGAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS GCA 72 bp | TCGACAGCCAGTGTGCACGAGCCTTCGAGCCAGCGATaGTCTCCGCTGGCCTCAAGGGCTGCACAGCGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: STASVHEPSSQR*SPLASRAAQRW Trigger: CCAGCGCTGTGCAGCCCTTGAGGCCAGCGGAGAGCATCGCTGGCTCGAAGGCTCGTGCACACTGGCTGTCGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS CCA 72 bp | GTAGCCGGCTGGGCCCAGTTGGTGAAGGCGGTGTCCTaGTCTCCCGTGGTCCATATGAAGCCCCGCAGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: VAGWAQLVKAVS*SPVVHMKPRSG Trigger: CCCACTGCGGGGCTTCATATGGACCACGGGAGACCAGGACACCGCCTTCACCAACTGGGCCCAGCCGGCTAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS GCA 72 bp | CATATGAAGCCCCGCAGTGGGCGCTGCGGCTGGCATTaGCTAGCCTGCCGCTGCAACCCAATCCATAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: HMKPRSGRCGWH*LACRCNPIHSS Trigger: GCTGCTATGGATTGGGTTGCAGCGGCAGGCTAGGCAATGCCAGCCGCAGCGCCCACTGCGGGGCTTCATATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS GCA 72 bp | ACGCACAGCAGAGAAGCTCCCCTGCCAGCTTGGCACTaGACAGCTGCCACGGAGCCAAAGGGCAGCCATTCG | + |
|
Preference number: 6 (lower is better) Translates to: THSREAPLPAWH*TAATEPKGSHS Trigger: CGAATGGCTGCCCTTTGGCTCCGTGGCAGCTGTGCAGTGCCAAGCTGGCAGGGGAGCTTCTCTGCTGTGCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS CCA 72 bp | GTGGTCCATATGAAGCCCCGCAGTGGGCGCTGCGGCTaGCATTGCCTAGCCTGCCGCTGCAACCCAATCCAT | + |
|
Preference number: 6 (lower is better) Translates to: VVHMKPRSGRCG*HCLACRCNPIH Trigger: ATGGATTGGGTTGCAGCGGCAGGCTAGGCAATGCCAGCCGCAGCGCCCACTGCGGGGCTTCATATGGACCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS CAA 90 bp | ACAGCACCGTCCACCTCTTCCACACACTCATGTTCGCAACCCCCATaGTCAGGACCACAGCCAGTCCCTGGGCACAGCGGGCCAGTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: TAPSTSSTHSCSQPP*SGPQPVPGHSGPVW Trigger: CCAGACTGGCCCGCTGTGCCCAGGGACTGGCTGTGGTCCTGACAATGGGGGTTGCGAACATGAGTGTGTGGAAGAGGTGGACGGTGCTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS TCA 72 bp | AAGCCTGGGCACCCATGGCTCCTGCAGGGCTACAGCTaGTACCATCTGCCTCAAGCTCGTGACCCTCGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: KPGHPWLLQGYS*YHLPQARDPRC Trigger: GCAGCGAGGGTCACGAGCTTGAGGCAGATGGTATCAGCTGTAGCCCTGCAGGAGCCATGGGTGCCCAGGCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS TCA 72 bp | CCAGCGGTCATCCCTTTGGCTTTGGCCTGCAAGACCTaGCTCTGCCAGGGCTGTTGGAGCTGCTGTGGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: PAVIPLALACKT*LCQGCWSCCGG Trigger: CCCTCCACAGCAGCTCCAACAGCCCTGGCAGAGTCAGGTCTTGCAGGCCAAAGCCAAAGGGATGACCGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS GCA 72 bp | CAGAGAAGCTCCCCTGCCAGCTTGGCACTGCACAGCTaGCACGGAGCCAAAGGGCAGCCATTCGAACTCGCT | + |
|
Preference number: 6 (lower is better) Translates to: QRSSPASLALHS*HGAKGQPFELA Trigger: AGCGAGTTCGAATGGCTGCCCTTTGGCTCCGTGGCAGCTGTGCAGTGCCAAGCTGGCAGGGGAGCTTCTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS CCA 72 bp | AGGGCACCGAGGGCAGCTGTGGCACTGATTTGGGACTaGGAACTCCTTCCCTTGGGACTAGAGGGGCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RAPRAAVALIWD*ELLPLGLEGLW Trigger: CCAGAGCCCCTCTAGTCCCAAGGGAAGGAGTTCCCAGTCCCAAATCAGTGCCACAGCTGCCCTCGGTGCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS CCA 72 bp | CTGTGGAGGGCACCGAGGGCAGCTGTGGCACTGATTTaGGACTGGGAACTCCTTCCCTTGGGACTAGAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LWRAPRAAVALI*DWELLPLGLEG Trigger: CCCCTCTAGTCCCAAGGGAAGGAGTTCCCAGTCCCAAATCAGTGCCACAGCTGCCCTCGGTGCCCTCCACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS CCA 72 bp | CAAGACCTGACTCTGCCAGGGCTGTTGGAGCTGCTGTaGAGGGCACCGAGGGCAGCTGTGGCACTGATTTGG | + |
|
Preference number: 6 (lower is better) Translates to: QDLTLPGLLELL*RAPRAAVALIW Trigger: CCAAATCAGTGCCACAGCTGCCCTCGGTGCCCTCCACAGCAGCTCCAACAGCCCTGGCAGAGTCAGGTCTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS CCA 72 bp | ACCAGGAGTGCCACCAGCAGCCAGCGGTCATCCCTTTaGCTTTGGCCTGCAAGACCTGACTCTGCCAGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: TRSATSSQRSSL*LWPARPDSARA Trigger: AGCCCTGGCAGAGTCAGGTCTTGCAGGCCAAAGCCAAAGGGATGACCGCTGGCTGCTGGTGGCACTCCTGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS CAA 72 bp | GCTGTGGAGGGCACCGAGGGCAGCTGTGGCACTGATTaGGGACTGGGAACTCCTTCCCTTGGGACTAGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: AVEGTEGSCGTD*GLGTPSLGTRG Trigger: CCCTCTAGTCCCAAGGGAAGGAGTTCCCAGTCCCAAATCAGTGCCACAGCTGCCCTCGGTGCCCTCCACAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS CAA 90 bp | GTTGGAGCTGCTGTGGAGGGCACCGAGGGCAGCTGTGGCACTGATTaGGGACTGGGAACTCCTTCCCTTGGGACTAGAGGGGCTCTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: VGAAVEGTEGSCGTD*GLGTPSLGTRGALE Trigger: TTCCAGAGCCCCTCTAGTCCCAAGGGAAGGAGTTCCCAGTCCCAAATCAGTGCCACAGCTGCCCTCGGTGCCCTCCACAGCAGCTCCAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS GCA 72 bp | AACCAAACTGGCAGAGGTAGCCATCGACAGCCAGTGTaGACGAGCCTTCGAGCCAGCGATGCTCTCCGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: NQTGRGSHRQPV*TSLRASDALRW Trigger: CCAGCGGAGAGCATCGCTGGCTCGAAGGCTCGTGCACACTGGCTGTCGATGGCTACCTCTGCCAGTTTGGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS GCA 72 bp | TCACAGGGGGCCTGGGCACAGGGGTCTTCACAACTGTaGCCATCTGCTGCTAGACGGAAGCCTTCACTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SQGAWAQGSSQL*PSAARRKPSLQ Trigger: CTGCAGTGAAGGCTTCCGTCTAGCAGCAGATGGGCACAGTTGTGAAGACCCCTGTGCCCAGGCCCCCTGTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS CCA 72 bp | AGCAATCTGGCACTCATCCGTGTCCACGCAGCGGTGTaGATCATCCTCAGCTGGCCGGAAGCCAAGGCGACA | + |
|
Preference number: 6 (lower is better) Translates to: SNLALIRVHAAV*IILSWPEAKAT Trigger: TGTCGCCTTGGCTTCCGGCCAGCTGAGGATGATCCACACCGCTGCGTGGACACGGATGAGTGCCAGATTGCT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS CCA 72 bp | AGTGCCACCAGCAGCCAGCGGTCATCCCTTTGGCTTTaGCCTGCAAGACCTGACTCTGCCAGGGCTGTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: SATSSQRSSLWL*PARPDSARAVG Trigger: TCCAACAGCCCTGGCAGAGTCAGGTCTTGCAGGCCAAAGCCAAAGGGATGACCGCTGGCTGCTGGTGGCACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS CAA 72 bp | TCCACCTCTTCCACACACTCATGTTCGCAACCCCCATaGTCAGGACCACAGCCAGTCCCTGGGCACAGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: STSSTHSCSQPP*SGPQPVPGHSG Trigger: CCCGCTGTGCCCAGGGACTGGCTGTGGTCCTGACAATGGGGGTTGCGAACATGAGTGTGTGGAAGAGGTGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS GCA 72 bp | AACTGTGCCCATCTGCTGCTAGACGGAAGCCTTCACTaGAGCGGCAGGACACAGCACCGTCCACCTCTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: NCAHLLLDGSLH*SGRTQHRPPLP Trigger: TGGAAGAGGTGGACGGTGCTGTGTCCTGCCGCTGCAGTGAAGGCTTCCGTCTAGCAGCAGATGGGCACAGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS GCA 72 bp | TGGGTGCGTGGGAGCCACAGCGAGTGCAGTACACAATaGCCAGGGCAAGCAGCACCACCAAGAAGACACATG | + |
|
Preference number: 6 (lower is better) Translates to: WVRGSHSECSTQ*PGQAAPPRRHM Trigger: CATGTGTCTTCTTGGTGGTGCTGCTTGCCCTGGGCATTGTGTACTGCACTCGCTGTGGCTCCCACGCACCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS CAA 90 bp | AGTACACAATGCCCAGGGCAAGCAGCACCACCAAGAAGACACATGTaGGCACCAGGAGTGCCACCAGCAGCCAGCGGTCATCCCTTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: STQCPGQAAPPRRHM*APGVPPAASGHPFG Trigger: GCCAAAGGGATGACCGCTGGCTGCTGGTGGCACTCCTGGTGCCAACATGTGTCTTCTTGGTGGTGCTGCTTGCCCTGGGCATTGTGTACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
||
| CDS CAA 90 bp | GGGGGCCTGGGTTCTGATACCTGGAGCATCTGGGAGCAAAGGGTGTaGATGGGCTTTAGAAGTGGTATCCCCAGGATCAAGGTGAGGGGG | + |
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Preference number: 6 (lower is better) Translates to: GGLGSDTWSIWEQRV*MGFRSGIPRIKVRG Trigger: CCCCCTCACCTTGATCCTGGGGATACCACTTCTAAAGCCCATCAACACCCTTTGCTCCCAGATGCTCCAGGTATCAGAACCCAGGCCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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| CDS TCA 72 bp | CCTCCCCTTCTTCTCCATCATCCAGCAACTCATCTCTaGGATCCTGGGAAGCCTGGGCACCCATGGCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: PPLLLHHPATHL*DPGKPGHPWLL Trigger: CAGGAGCCATGGGTGCCCAGGCTTCCCAGGATCTCAGAGATGAGTTGCTGGATGATGGAGAAGAAGGGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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| CDS GCA 72 bp | GTGCCAGCCATAGGATCCCCTGTTCCTCTGTCCAGGTaGCATCAAAGTCCTCCCAGGGCTCCTCTTCATCCT | + |
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Preference number: 6 (lower is better) Translates to: VPAIGSPVPLSR*HQSPPRAPLHP Trigger: AGGATGAAGAGGAGCCCTGGGAGGACTTTGATGGCACCTGGACAGAGGAACAGGGGATCCTATGGCTGGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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| CDS CAA 90 bp | TGGACAGGGCTCAGGGGTGGGCGTGTAGCTGAAATAACAGAGGTCTaGTGGGCAGAAGGTAGTGTGGGTCGAGTGGCAGAGATCACCATG | + |
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Preference number: 6 (lower is better) Translates to: WTGLRGGRVAEITEV*WAEGSVGRVAEITM Trigger: CATGGTGATCTCTGCCACTCGACCCACACTACCTTCTGCCCACAAGACCTCTGTTATTTCAGCTACACGCCCACCCCTGAGCCCTGTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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| CDS CAA 72 bp | CTCAGGGGTGGGCGTGTAGCTGAAATAACAGAGGTCTaGTGGGCAGAAGGTAGTGTGGGTCGAGTGGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: LRGGRVAEITEV*WAEGSVGRVAE Trigger: CTCTGCCACTCGACCCACACTACCTTCTGCCCACAAGACCTCTGTTATTTCAGCTACACGCCCACCCCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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| CDS TCA 72 bp | CCTCGCTGCAGTAACACTCAAAGCCACCAACATAGTTaGCACACATCTGCTGGCACACACCAGCAATCTGGC | + |
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Preference number: 6 (lower is better) Translates to: PRCSNTQSHQHS*HTSAGTHQQSG Trigger: GCCAGATTGCTGGTGTGTGCCAGCAGATGTGTGTCAACTATGTTGGTGGCTTTGAGTGTTACTGCAGCGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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| CDS CAA 72 bp | GGTTCTGATACCTGGAGCATCTGGGAGCAAAGGGTGTaGATGGGCTTTAGAAGTGGTATCCCCAGGATCAAG | + |
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Preference number: 6 (lower is better) Translates to: GSDTWSIWEQRV*MGFRSGIPRIK Trigger: CTTGATCCTGGGGATACCACTTCTAAAGCCCATCAACACCCTTTGCTCCCAGATGCTCCAGGTATCAGAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070630.8 |
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