Pregenerated sensors for CD247 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005763Ensembl transcript IDs: ENSMUST00000005907.12, ENSMUST00000027849.11, ENSMUST00000086002.11, ENSMUST00000161559.3, ENSMUST00000161971.8, ENSMUST00000178336.8, ENSMUST00000187313.7
Found 328 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCTCTGCAAGGAGAGGAGCCTGCCAGAAGACCCAAGAGCAGGGCTaGGGTGGAAGAGCAAGGGTGGCTCTCCCTTTAGAGAGTCCAGGG | + |
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Preference number: 1 (lower is better) Translates to: GSARRGACQKTQEQG*GGRARVALPLESPG Trigger: CCCTGGACTCTCTAAAGGGAGAGCCACCCTTGCTCTTCCACCCCAGCCCTGCTCTTGGGTCTTCTGGCAGGCTCCTCTCCTTGCAGAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
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| 3UTR GCA 90 bp | GGATGCCCAGGCACAGGTTACAACCCTCCCTGTCTGTGGCTGTCATaGCCTTGCCCCAAGACCTGCCAGGCTCTCCTGACGATCCATTAC | + |
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Preference number: 1 (lower is better) Translates to: GCPGTGYNPPCLWLS*PCPKTCQALLTIHY Trigger: GTAATGGATCGTCAGGAGAGCCTGGCAGGTCTTGGGGCAAGGGCATGACAGCCACAGACAGGGAGGGTTGTAACCTGTGCCTGGGCATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| 3UTR CCA 90 bp | GTGGTCTGGGTCTTCCTGCCACCTGACAGGGATGAACCGAGTTCCTaGAAGAAGGCAGGACTTGCTCCCTTTTCTCTTGCTCCCTTGTCG | + |
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Preference number: 1 (lower is better) Translates to: VVWVFLPPDRDEPSS*KKAGLAPFSLAPLS Trigger: CGACAAGGGAGCAAGAGAAAAGGGAGCAAGTCCTGCCTTCTTCCAGGAACTCGGTTCATCCCTGTCAGGTGGCAGGAAGACCCAGACCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
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| 3UTR GCA 90 bp | GTTGGGGGTTTGAGGCCTCTCTGTGATCTGATATGCAGCACAGTATaGAGAACCATGCAGGTGATGTGTGGGGTGTCCAGTGGGTTCAGG | + |
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Preference number: 1 (lower is better) Translates to: VGGLRPLCDLICSTV*RTMQVMCGVSSGFR Trigger: CCTGAACCCACTGGACACCCCACACATCACCTGCATGGTTCTGCATACTGTGCTGCATATCAGATCACAGAGAGGCCTCAAACCCCCAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| 3UTR CCA 90 bp | GTGTGTTGCTTCCCTTCTTTGAGCCACCTCTGGCTGGCATTTACCTaGACTCCCTTGTACCTGCCTCTCTGCCTTTCACAATGTGGCCTA | + |
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Preference number: 1 (lower is better) Translates to: VCCFPSLSHLWLAFT*TPLYLPLCLSQCGL Trigger: TAGGCCACATTGTGAAAGGCAGAGAGGCAGGTACAAGGGAGTCCAGGTAAATGCCAGCCAGAGGTGGCTCAAAGAAGGGAAGCAACACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
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| 3UTR CCA 90 bp | CTAGGAACCTTCCTTGTGTGTTGCTTCCCTTCTTTGAGCCACCTCTaGCTGGCATTTACCTGGACTCCCTTGTACCTGCCTCTCTGCCTT | + |
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Preference number: 1 (lower is better) Translates to: LGTFLVCCFPSLSHL*LAFTWTPLYLPLCL Trigger: AAGGCAGAGAGGCAGGTACAAGGGAGTCCAGGTAAATGCCAGCCAGAGGTGGCTCAAAGAAGGGAAGCAACACACAAGGAAGGTTCCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
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| 3UTR TCA 90 bp | TACACACAGTACCTAGGGCTTCTCTGGGGACTTTACAAAGCAAACTaGACTCAGCTAGCTGCAGGAGGGAGTGTGTTAGTGCCCCACCCT | + |
|
Preference number: 1 (lower is better) Translates to: YTQYLGLLWGLYKAN*TQLAAGGSVLVPHP Trigger: AGGGTGGGGCACTAACACACTCCCTCCTGCAGCTAGCTGAGTTCAGTTTGCTTTGTAAAGTCCCCAGAGAAGCCCTAGGTACTGTGTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
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| 3UTR CCA 90 bp | ACATCTTACCGTTCCTGGAGTGCCTGGCACAAAGGCTGGGAGATGTaGAAAGTACTCTTGATGGAAAGAGGCCCCTTGTTACTGTTCCCC | + |
|
Preference number: 1 (lower is better) Translates to: TSYRSWSAWHKGWEM*KVLLMERGPLLLFP Trigger: GGGGAACAGTAACAAGGGGCCTCTTTCCATCAAGAGTACTTTCCACATCTCCCAGCCTTTGTGCCAGGCACTCCAGGAACGGTAAGATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
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| 3UTR CCA 90 bp | CCTGTAGAGCTGTTTTTGCTGCACAGTGTGTTAGGATACGGCTGCTaGGAGGCTAAGAGGCTTCTTATGTCGGCAGGCACAACTCATGTG | + |
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Preference number: 1 (lower is better) Translates to: PVELFLLHSVLGYGC*EAKRLLMSAGTTHV Trigger: CACATGAGTTGTGCCTGCCGACATAAGAAGCCTCTTAGCCTCCCAGCAGCCGTATCCTAACACACTGTGCAGCAAAAACAGCTCTACAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086002.11 ENSMUST00000187313.7 |
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| 3UTR GCA 90 bp | TCTCCTGTAGAGCTGTTTTTGCTGCACAGTGTGTTAGGATACGGCTaGTGGGAGGCTAAGAGGCTTCTTATGTCGGCAGGCACAACTCAT | + |
|
Preference number: 1 (lower is better) Translates to: SPVELFLLHSVLGYG*WEAKRLLMSAGTTH Trigger: ATGAGTTGTGCCTGCCGACATAAGAAGCCTCTTAGCCTCCCAGCAGCCGTATCCTAACACACTGTGCAGCAAAAACAGCTCTACAGGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000187313.7 |
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| 3UTR GCA 90 bp | CACCTCTGGCTGGCATTTACCTGGACTCCCTTGTACCTGCCTCTCTaGCTTTCACAATGTGGCCTAATTACATGTTACCTCAACACTGCA | + |
|
Preference number: 1 (lower is better) Translates to: HLWLAFTWTPLYLPL*LSQCGLITCYLNTA Trigger: TGCAGTGTTGAGGTAACATGTAATTAGGCCACATTGTGAAAGGCAGAGAGGCAGGTACAAGGGAGTCCAGGTAAATGCCAGCCAGAGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
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| 3UTR CCA 90 bp | TCCTCTAATTCACCAATGGAAAGTAAGTGTAAGGTTCTAGCAGGGTaGTCAGGAAACCTCTTCCTCAGCATTCGTCCAGTTCATACCCGG | + |
|
Preference number: 1 (lower is better) Translates to: SSNSPMESKCKVLAG*SGNLFLSIRPVHTR Trigger: CCGGGTATGAACTGGACGAATGCTGAGGAAGAGGTTTCCTGACCACCCTGCTAGAACCTTACACTTACTTTCCATTGGTGAATTAGAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| 3UTR TCA 90 bp | TTCACAATGTGGCCTAATTACATGTTACCTCAACACTGCAAAGTGTaGCAACAGAAGCCAAATTTACAGCAGGAGCGGAGCGAGTCAATA | + |
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Preference number: 1 (lower is better) Translates to: FTMWPNYMLPQHCKV*QQKPNLQQERSESI Trigger: TATTGACTCGCTCCGCTCCTGCTGTAAATTTGGCTTCTGTTGTCACACTTTGCAGTGTTGAGGTAACATGTAATTAGGCCACATTGTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
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| 3UTR GCA 90 bp | AAGTTGAGAGATTCATTCAGATGCATGCCCAGGAGTTTTGGCCCTTaGTCACTTCTGAGTAGAGCATGCATGAAAGAAATTGGAACATCA | + |
|
Preference number: 1 (lower is better) Translates to: KLRDSFRCMPRSFGP*SLLSRACMKEIGTS Trigger: TGATGTTCCAATTTCTTTCATGCATGCTCTACTCAGAAGTGAGCAAGGGCCAAAACTCCTGGGCATGCATCTGAATGAATCTCTCAACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027849.11 |
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| 3UTR CCA 90 bp | TCTTTATATCTGTCTTGCCAAAGGAAACTTGATATTCCCTATGAATaGGTTGGGGGTTTGAGGCCTCTCTGTGATCTGATATGCAGCACA | + |
|
Preference number: 1 (lower is better) Translates to: SLYLSCQRKLDIPYE*VGGLRPLCDLICST Trigger: TGTGCTGCATATCAGATCACAGAGAGGCCTCAAACCCCCAACCCATTCATAGGGAATATCAAGTTTCCTTTGGCAAGACAGATATAAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| 3UTR CCA 90 bp | GTGGTACCTTATTCTGTGAGAATAATGCTCATGGGGAACAGCTTCTaGCACCTTCATAAAATACCTCAGCATAGCTTAGCATTGTTACAG | + |
|
Preference number: 1 (lower is better) Translates to: VVPYSVRIMLMGNSF*HLHKIPQHSLALLQ Trigger: CTGTAACAATGCTAAGCTATGCTGAGGTATTTTATGAAGGTGCCAGAAGCTGTTCCCCATGAGCATTATTCTCACAGAATAAGGTACCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| 3UTR CCA 90 bp | CTTTGCCATTCCTCTGAGAATAAAACACTGTTCCACAGGTTTGCATaGATTGCACACACAAGCATAAATAGAAAAGGCGGAAATAAGGTC | + |
|
Preference number: 1 (lower is better) Translates to: LCHSSENKTLFHRFA*IAHTSINRKGGNKV Trigger: GACCTTATTTCCGCCTTTTCTATTTATGCTTGTGTGTGCAATCCATGCAAACCTGTGGAACAGTGTTTTATTCTCAGAGGAATGGCAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| 3UTR CAA 90 bp | AAAGGGAAGTCTTCGGCCCCAATGCAGTCTGTGGCGTCCTGGCACTaGGAGGCATGCCAAAGGGTAGGTGGGGACACCTGGCCAGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: KGKSSAPMQSVASWH*EACQRVGGDTWPAQ Trigger: CTGAGCTGGCCAGGTGTCCCCACCTACCCTTTGGCATGCCTCCAAGTGCCAGGACGCCACAGACTGCATTGGGGCCGAAGACTTCCCTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027849.11 |
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| 3UTR-3UTR TCA 90 bp | GATGCCCAGGCACAGGTTACAACCCTCCCTGTCTGTGGCTGTCATGCCCTTGCCGCAGAACCATGCAGGTaGTGTGTGGGGTGTCCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: DAQAQVTTLPVCGCHALAAEPCR*CVGCPV Trigger: CACTGGACACCCCACACATCACCTGCATGGTTCTGC...GGCAAGGGCATGACAGCCACAGACAGGGAGGGTTGTAACCTGTGCCTGGGCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| 3UTR-3UTR GCA 90 bp | TGTGTGTTGCTTCCCTTCTTTGAGCCACCTCTGGCTGGCATTTACCTGGACTCCGCAAGGAGAGGAGCCTaGCAGAAGACCCAAGAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: CVLLPFFEPPLAGIYLDSARRGA*QKTQEQ Trigger: CTGCTCTTGGGTCTTCTGGCAGGCTCCTCTCCTTGC...GGAGTCCAGGTAAATGCCAGCCAGAGGTGGCTCAAAGAAGGGAAGCAACACACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
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| 3UTR-3UTR CCA 90 bp | TCTGGCTGGCATTTACCTGGACTCCCTTGTACCTGCCTCTCTGCCTTTCACAATACCCAAGAGCAGGGCTaGGGTGGAAGAGCAAGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: SGWHLPGLPCTCLSAFHNTQEQG*GGRARV Trigger: CACCCTTGCTCTTCCACCCCAGCCCTGCTCTTGGGT...ATTGTGAAAGGCAGAGAGGCAGGTACAAGGGAGTCCAGGTAAATGCCAGCCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
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| 3UTR-3UTR GCA 90 bp | GTCTTCGGCCCCAATGCAGTCTGTGGCGTCCTGGCACTTGGAGGCATGCCAAAGAGAGATTCATTCAGATaGATGCCCAGGAGTTTTGGC | + |
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Preference number: 2 (lower is better) Translates to: VFGPNAVCGVLALGGMPKRDSFR*MPRSFG Trigger: GCCAAAACTCCTGGGCATGCATCTGAATGAATCTCT...CTTTGGCATGCCTCCAAGTGCCAGGACGCCACAGACTGCATTGGGGCCGAAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027849.11 |
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| 3UTR-3UTR TCA 90 bp | ATGCAGCACAGTATGCAGAACCATGCAGGTGATGTGTGGGGTGTCCAGTGGGTTCAGACTACAGCCGAATaGCATCTCCTTCCTCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: MQHSMQNHAGDVWGVQWVQTTAE*HLLPLL Trigger: CAGGAGAGGAAGGAGATGTCATTCGGCTGTAGTCTG...AACCCACTGGACACCCCACACATCACCTGCATGGTTCTGCATACTGTGCTGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161559.3 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| 3UTR-3UTR TCA 90 bp | CTAGCAGGGTGGTCAGGAAACCTCTTCCTCAGCATTCGTCCAGTTCATACCCGGCACGTGTCGATTCAGTaGTCTGGATCTCTCTGTCTC | + |
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Preference number: 2 (lower is better) Translates to: LAGWSGNLFLSIRPVHTRHVSIQ*SGSLCL Trigger: GAGACAGAGAGATCCAGATCACTGAATCGACACGTG...CCGGGTATGAACTGGACGAATGCTGAGGAAGAGGTTTCCTGACCACCCTGCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| 3UTR-3UTR CCA 90 bp | ACGTTGCAGACCTGGGTGGTCTGGGTCTTCCTGCCACCTGACAGGGATGAACCGAAAGGCTGGGAGATGTaGAAAGTACTCTTGATGGAA | + |
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Preference number: 2 (lower is better) Translates to: TLQTWVVWVFLPPDRDEPKGWEM*KVLLME Trigger: TTCCATCAAGAGTACTTTCCACATCTCCCAGCCTTT...CGGTTCATCCCTGTCAGGTGGCAGGAAGACCCAGACCACCCAGGTCTGCAACGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
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| 3UTR CAA 90 bp | GACTACAGCCGAATGACATCTCCTTCCTCTCCTGTAGAGCTGTTTTaGCTGCACAGTGTGTTAGGATACGGCTGCTGGGAGGCTAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: DYSRMTSPSSPVELF*LHSVLGYGCWEAKR Trigger: CCTCTTAGCCTCCCAGCAGCCGTATCCTAACACACTGTGCAGCAAAAACAGCTCTACAGGAGAGGAAGGAGATGTCATTCGGCTGTAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187313.7 |
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| 3UTR-3UTR TCA 90 bp | CTGGCTGGCATTTACCTGGACTCCCTTGTACCTGCCTCTCTGCCTTTCACAATGGACAAATGTGGCAAGTaGGAGAACCATCCTCGTCAT | + |
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Preference number: 2 (lower is better) Translates to: LAGIYLDSLVPASLPFTMDKCGK*ENHPRH Trigger: ATGACGAGGATGGTTCTCTCACTTGCCACATTTGTC...CATTGTGAAAGGCAGAGAGGCAGGTACAAGGGAGTCCAGGTAAATGCCAGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
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| 3UTR-3UTR TCA 90 bp | CCTTCTTTGAGCCACCTCTGGCTGGCATTTACCTGGACTCCCTTGTACCTGCCTTCAGTGCTCTGGAACTaGAGAAGACAAATGTGGCAA | + |
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Preference number: 2 (lower is better) Translates to: PSLSHLWLAFTWTPLYLPSVLWN*RRQMWQ Trigger: TTGCCACATTTGTCTTCTTCAGTTCCAGAGCACTGA...AGGCAGGTACAAGGGAGTCCAGGTAAATGCCAGCCAGAGGTGGCTCAAAGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
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| 3UTR-3UTR TCA 90 bp | GATGCCCAGGCACAGGTTACAACCCTCCCTGTCTGTGGCTGTCATGCCCTTGCCATAACACTGATACTCTaGCTGAGAAAGAAACTTGGA | + |
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Preference number: 2 (lower is better) Translates to: DAQAQVTTLPVCGCHALAITLIL*LRKKLG Trigger: TCCAAGTTTCTTTCTCAGTCAGAGTATCAGTGTTAT...GGCAAGGGCATGACAGCCACAGACAGGGAGGGTTGTAACCTGTGCCTGGGCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| 3UTR-3UTR GCA 90 bp | AATACCCATAGAACAATACACACAGTACCTAGGGCTTCTCTGGGGACTTTACAAGCTAGGGCTGGGCTCTaGAAGGAGAGGAGCCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: NTHRTIHTVPRASLGTLQARAGL*KERSLP Trigger: TGGCAGGCTCCTCTCCTTGCAGAGCCCAGCCCTAGC...TTGTAAAGTCCCCAGAGAAGCCCTAGGTACTGTGTGTATTGTTCTATGGGTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
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| 3UTR CAA 90 bp | AGTTCCTGGAAGAAGGCAGGACTTGCTCCCTTTTCTCTTGCTCCCTaGTCGTTGGCGGTAATGGCCCATCCTATTTTCTGTGTCAGTTTG | + |
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Preference number: 2 (lower is better) Translates to: SSWKKAGLAPFSLAP*SLAVMAHPIFCVSL Trigger: CAAACTGACACAGAAAATAGGATGGGCCATTACCGCCAACGACAAGGGAGCAAGAGAAAAGGGAGCAAGTCCTGCCTTCTTCCAGGAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
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| 3UTR CAA 90 bp | TGGAAGAAGGCAGGACTTGCTCCCTTTTCTCTTGCTCCCTTGTCGTaGGCGGTAATGGCCCATCCTATTTTCTGTGTCAGTTTGTACACA | + |
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Preference number: 2 (lower is better) Translates to: WKKAGLAPFSLAPLS*AVMAHPIFCVSLYT Trigger: TGTGTACAAACTGACACAGAAAATAGGATGGGCCATTACCGCCAACGACAAGGGAGCAAGAGAAAAGGGAGCAAGTCCTGCCTTCTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
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| 3UTR-3UTR CCA 90 bp | TTATATCTGTCTTGCCAAAGGAAACTTGATATTCCCTATGAATGGGTTGGGGGTGTGTGGGGTGTCCAGTaGGTTCAGGATGCCCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: LYLSCQRKLDIPYEWVGGVWGVQ*VQDAQA Trigger: TGCCTGGGCATCCTGAACCCACTGGACACCCCACAC...ACCCCCAACCCATTCATAGGGAATATCAAGTTTCCTTTGGCAAGACAGATATAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| 3UTR-3UTR CCA 90 bp | GTTCATACCCGGTGTATGGTAGGATTTGTGAACTGGGTTTCTTCCAACCATCATCATGCAGGTGATGTGTaGGGTGTCCAGTGGGTTCAG | + |
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Preference number: 2 (lower is better) Translates to: VHTRCMVGFVNWVSSNHHHAGDV*GVQWVQ Trigger: CTGAACCCACTGGACACCCCACACATCACCTGCATG...ATGATGGTTGGAAGAAACCCAGTTCACAAATCCTACCATACACCGGGTATGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| 3UTR-3UTR CCA 90 bp | CTAGCAGGGTGGTCAGGAAACCTCTTCCTCAGCATTCGTCCAGTTCATACCCGGGTAGGATTTGTGAACTaGGTTTCTTCCAACCATCAT | + |
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Preference number: 2 (lower is better) Translates to: LAGWSGNLFLSIRPVHTRVGFVN*VSSNHH Trigger: ATGATGGTTGGAAGAAACCCAGTTCACAAATCCTAC...CCGGGTATGAACTGGACGAATGCTGAGGAAGAGGTTTCCTGACCACCCTGCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| 3UTR CAA 90 bp | TCTTGCCAAAGGAAACTTGATATTCCCTATGAATGGGTTGGGGGTTaGAGGCCTCTCTGTGATCTGATATGCAGCACAGTATGCAGAACC | + |
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Preference number: 2 (lower is better) Translates to: SCQRKLDIPYEWVGG*RPLCDLICSTVCRT Trigger: GGTTCTGCATACTGTGCTGCATATCAGATCACAGAGAGGCCTCAAACCCCCAACCCATTCATAGGGAATATCAAGTTTCCTTTGGCAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| 3UTR-3UTR TCA 90 bp | TTGGCGGTAATGGCCCATCCTATTTTCTGTGTCAGTTTGTACACAAGTTATTTGGTTGCTTCCCTTCTTTaGGCCACCTCTGGCTGGCAT | + |
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Preference number: 2 (lower is better) Translates to: LAVMAHPIFCVSLYTSYLVASLL*ATSGWH Trigger: ATGCCAGCCAGAGGTGGCTCAAAGAAGGGAAGCAAC...CAAATAACTTGTGTACAAACTGACACAGAAAATAGGATGGGCCATTACCGCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
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| 3UTR-3UTR CCA 90 bp | GTTGATGGAATAATCTTTGCCTCATCCTCTAATTCACCAATGGAAAGTAAGTGTAACCCTCCCTGTCTGTaGCTGTCATGCCCTTGCCCC | + |
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Preference number: 2 (lower is better) Translates to: VDGIIFASSSNSPMESKCNPPCL*LSCPCP Trigger: GGGGCAAGGGCATGACAGCCACAGACAGGGAGGGTT...ACACTTACTTTCCATTGGTGAATTAGAGGATGAGGCAAAGATTATTCCATCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| 3UTR CAA 90 bp | TCTAGCTTTGGGAAGAGATTGGTTTTGTTCCTCCCTGCTGCTCGGTaGAGATTGGTAGAGTTTGCTCAGCATAACACTGATACTCTGACT | + |
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Preference number: 2 (lower is better) Translates to: SSFGKRLVLFLPAAR*RLVEFAQHNTDTLT Trigger: AGTCAGAGTATCAGTGTTATGCTGAGCAAACTCTACCAATCTCAACCGAGCAGCAGGGAGGAACAAAACCAATCTCTTCCCAAAGCTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| 3UTR-3UTR TCA 90 bp | AGGCAAGTCTTTTCTAAGTTGAGAGATTCATTCAGATGCATGCCCAGGAGTTTTTCACCACAACTCATGTaGCAGCAGCCAGGGTCATCA | + |
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Preference number: 2 (lower is better) Translates to: RQVFSKLRDSFRCMPRSFSPQLM*QQPGSS Trigger: TGATGACCCTGGCTGCTGTCACATGAGTTGTGGTGA...AAAACTCCTGGGCATGCATCTGAATGAATCTCTCAACTTAGAAAAGACTTGCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027849.11 |
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| 3UTR-3UTR TCA 90 bp | TCTGTCTCTTTTCCTTCTCTTATTCATTTGAGTGGTGGTACCTTATTCTGTGAGCAGGCACAACTCATGTaGCAGCAGCCAGGGTCATCA | + |
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Preference number: 2 (lower is better) Translates to: SVSFPSLIHLSGGTLFCEQAQLM*QQPGSS Trigger: TGATGACCCTGGCTGCTGTCACATGAGTTGTGCCTG...CTCACAGAATAAGGTACCACCACTCAAATGAATAAGAGAAGGAAAAGAGACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187313.7 |
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| 3UTR-3UTR GCA 90 bp | CTTCTGCTCTTGGCCTTTGCTGGAAGCAGTAAACTTGAGTATATCACGTGTCGACTCTGTGATCTGATATaGAGCACAGTATGCAGAACC | + |
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Preference number: 2 (lower is better) Translates to: LLLLAFAGSSKLEYITCRLCDLI*STVCRT Trigger: GGTTCTGCATACTGTGCTGCATATCAGATCACAGAG...TCGACACGTGATATACTCAAGTTTACTGCTTCCAGCAAAGGCCAAGAGCAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| 3UTR-3UTR CCA 90 bp | CAAGTTTTCCAGACACTCAAAGGCCATAGAGCAAACACTGAGGTTGGAAAGCTTGCTTTGGGAAGAGATTaGTTTTGTTCCTCCCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: QVFQTLKGHRANTEVGKLALGRD*FCSSLL Trigger: CAGCAGGGAGGAACAAAACCAATCTCTTCCCAAAGC...AAGCTTTCCAACCTCAGTGTTTGCTCTATGGCCTTTGAGTGTCTGGAAAACTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| 3UTR-3UTR CCA 90 bp | TTAAAGGTTGATGGAATAATCTTTGCCTCATCCTCTAATTCACCAATGGAAAGTGTGTGGGGTGTCCAGTaGGTTCAGGATGCCCAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: LKVDGIIFASSSNSPMESVWGVQ*VQDAQA Trigger: TGCCTGGGCATCCTGAACCCACTGGACACCCCACAC...ACTTTCCATTGGTGAATTAGAGGATGAGGCAAAGATTATTCCATCAACCTTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR-3UTR CCA 90 bp | AAGTGTAAGGTTCTAGCAGGGTGGTCAGGAAACCTCTTCCTCAGCATTCGTCCAGTAGGATTTGTGAACTaGGTTTCTTCCAACCATCAT | + |
|
Preference number: 2 (lower is better) Translates to: KCKVLAGWSGNLFLSIRPVGFVN*VSSNHH Trigger: ATGATGGTTGGAAGAAACCCAGTTCACAAATCCTAC...TGGACGAATGCTGAGGAAGAGGTTTCCTGACCACCCTGCTAGAACCTTACACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR-3UTR GCA 90 bp | TTCTGCTCTTGGCCTTTGCTGGAAGCAGTAAACTTGAGTATATCACGTGTCGATCTCTGTGATCTGATATaGAGCACAGTATGCAGAACC | + |
|
Preference number: 2 (lower is better) Translates to: FCSWPLLEAVNLSISRVDLCDLI*STVCRT Trigger: GGTTCTGCATACTGTGCTGCATATCAGATCACAGAG...ATCGACACGTGATATACTCAAGTTTACTGCTTCCAGCAAAGGCCAAGAGCAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR-3UTR CCA 90 bp | GCCAAGAAGTTGAAAGCTAACACAAGTCAAAAGCTAACCCTACCCTGTACTAAGGCTTTGGGAAGAGATTaGTTTTGTTCCTCCCTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: AKKLKANTSQKLTLPCTKALGRD*FCSSLL Trigger: CAGCAGGGAGGAACAAAACCAATCTCTTCCCAAAGC...CTTAGTACAGGGTAGGGTTAGCTTTTGACTTGTGTTAGCTTTCAACTTCTTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR-3UTR CCA 90 bp | TTCTGCTCTTGGCCTTTGCTGGAAGCAGTAAACTTGAGTATATCACGTGTCGATGACTGGGTGATGAGATaGAAGAAGAGTTGTTCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: FCSWPLLEAVNLSISRVDDWVMR*KKSCSS Trigger: GGAAGAACAACTCTTCTTCCATCTCATCACCCAGTC...ATCGACACGTGATATACTCAAGTTTACTGCTTCCAGCAAAGGCCAAGAGCAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR-3UTR CCA 90 bp | TTCTGCTCTTGGCCTTTGCTGGAAGCAGTAAACTTGAGTATATCACGTGTCGATATGGGGAACAGCTTCTaGCACCTTCATAAAATACCT | + |
|
Preference number: 2 (lower is better) Translates to: FCSWPLLEAVNLSISRVDMGNSF*HLHKIP Trigger: AGGTATTTTATGAAGGTGCCAGAAGCTGTTCCCCAT...ATCGACACGTGATATACTCAAGTTTACTGCTTCCAGCAAAGGCCAAGAGCAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR CAA 90 bp | ATCATTCTCTTCATGAACCAATTCCTTAGTTTGACCCTTCTGCTCTaGGCCTTTGCTGGAAGCAGTAAACTTGAGTATATCACGTGTCGA | + |
|
Preference number: 2 (lower is better) Translates to: IILFMNQFLSLTLLL*AFAGSSKLEYITCR Trigger: TCGACACGTGATATACTCAAGTTTACTGCTTCCAGCAAAGGCCAAGAGCAGAAGGGTCAAACTAAGGAATTGGTTCATGAAGAGAATGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR-3UTR CCA 90 bp | AAACTTGAGTATATCACGTGTCGATTCAGTGATCTGGATCTCTCTGTCTCTTTTGCTTTGGGAAGAGATTaGTTTTGTTCCTCCCTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: KLEYITCRFSDLDLSVSFALGRD*FCSSLL Trigger: CAGCAGGGAGGAACAAAACCAATCTCTTCCCAAAGC...AAAAGAGACAGAGAGATCCAGATCACTGAATCGACACGTGATATACTCAAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR-3UTR CCA 90 bp | CTTCTGCTCTTGGCCTTTGCTGGAAGCAGTAAACTTGAGTATATCACGTGTCGACTCACAGAACTTGAGTaGGATTTGATTTTGATACCA | + |
|
Preference number: 2 (lower is better) Translates to: LLLLAFAGSSKLEYITCRLTELE*DLILIP Trigger: TGGTATCAAAATCAAATCCCACTCAAGTTCTGTGAG...TCGACACGTGATATACTCAAGTTTACTGCTTCCAGCAAAGGCCAAGAGCAGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR-3UTR CCA 90 bp | AACAGCTTCTGGCACCTTCATAAAATACCTCAGCATAGCTTAGCATTGTTACAGGACTGGGTGATGAGATaGAAGAAGAGTTGTTCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: NSFWHLHKIPQHSLALLQDWVMR*KKSCSS Trigger: GGAAGAACAACTCTTCTTCCATCTCATCACCCAGTC...CTGTAACAATGCTAAGCTATGCTGAGGTATTTTATGAAGGTGCCAGAAGCTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR-3UTR GCA 90 bp | TTATATCTGTCTTGCCAAAGGAAACTTGATATTCCCTATGAATGGGTTGGGGGTTGTCATGTTAGTGATTaGTGTGCTAGTAGTAGCCCA | + |
|
Preference number: 2 (lower is better) Translates to: LYLSCQRKLDIPYEWVGGCHVSD*CASSSP Trigger: TGGGCTACTACTAGCACAGCAATCACTAACATGACA...ACCCCCAACCCATTCATAGGGAATATCAAGTTTCCTTTGGCAAGACAGATATAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR-3UTR GCA 90 bp | TCTGTCTCTTTTCCTTCTCTTATTCATTTGAGTGGTGGTACCTTATTCTGTGAGCTCTGTGATCTGATATaGAGCACAGTATGCAGAACC | + |
|
Preference number: 2 (lower is better) Translates to: SVSFPSLIHLSGGTLFCELCDLI*STVCRT Trigger: GGTTCTGCATACTGTGCTGCATATCAGATCACAGAG...CTCACAGAATAAGGTACCACCACTCAAATGAATAAGAGAAGGAAAAGAGACAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR-3UTR CCA 90 bp | AACAGCTTCTGGCACCTTCATAAAATACCTCAGCATAGCTTAGCATTGTTACAGATGGGGAACAGCTTCTaGCACCTTCATAAAATACCT | + |
|
Preference number: 2 (lower is better) Translates to: NSFWHLHKIPQHSLALLQMGNSF*HLHKIP Trigger: AGGTATTTTATGAAGGTGCCAGAAGCTGTTCCCCAT...CTGTAACAATGCTAAGCTATGCTGAGGTATTTTATGAAGGTGCCAGAAGCTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR CAA 90 bp | CTTGAGTGGGATTTGATTTTGATACCAAAGACAACTGCTAAACCATaGCTTCTCAAGTTTTCCAGACACTCAAAGGCCATAGAGCAAACA | + |
|
Preference number: 2 (lower is better) Translates to: LEWDLILIPKTTAKP*LLKFSRHSKAIEQT Trigger: TGTTTGCTCTATGGCCTTTGAGTGTCTGGAAAACTTGAGAAGCAATGGTTTAGCAGTTGTCTTTGGTATCAAAATCAAATCCCACTCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR-3UTR TCA 90 bp | TTGGCGGTAATGGCCCATCCTATTTTCTGTGTCAGTTTGTACACAAGTTATTTGCAACACTGCAAAGTGTaGCAACAGAAGCCAAATTTA | + |
|
Preference number: 2 (lower is better) Translates to: LAVMAHPIFCVSLYTSYLQHCKV*QQKPNL Trigger: TAAATTTGGCTTCTGTTGTCACACTTTGCAGTGTTG...CAAATAACTTGTGTACAAACTGACACAGAAAATAGGATGGGCCATTACCGCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
||
| 3UTR-3UTR TCA 90 bp | TTATATCTGTCTTGCCAAAGGAAACTTGATATTCCCTATGAATGGGTTGGGGGTACCAAGCCAAGAAGTTaGAAGCTAACACAAGTCAAA | + |
|
Preference number: 2 (lower is better) Translates to: LYLSCQRKLDIPYEWVGGTKPRS*KLTQVK Trigger: TTTGACTTGTGTTAGCTTTCAACTTCTTGGCTTGGT...ACCCCCAACCCATTCATAGGGAATATCAAGTTTCCTTTGGCAAGACAGATATAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR-3UTR TCA 90 bp | TCTGTCTCTTTTCCTTCTCTTATTCATTTGAGTGGTGGTACCTTATTCTGTGAGACCAAGCCAAGAAGTTaGAAGCTAACACAAGTCAAA | + |
|
Preference number: 2 (lower is better) Translates to: SVSFPSLIHLSGGTLFCETKPRS*KLTQVK Trigger: TTTGACTTGTGTTAGCTTTCAACTTCTTGGCTTGGT...CTCACAGAATAAGGTACCACCACTCAAATGAATAAGAGAAGGAAAAGAGACAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR-3UTR GCA 90 bp | TCTGTCTCTTTTCCTTCTCTTATTCATTTGAGTGGTGGTACCTTATTCTGTGAGCAACTGCTAAACCATTaGTTCTCAAGTTTTCCAGAC | + |
|
Preference number: 2 (lower is better) Translates to: SVSFPSLIHLSGGTLFCEQLLNH*FSSFPD Trigger: GTCTGGAAAACTTGAGAAGCAATGGTTTAGCAGTTG...CTCACAGAATAAGGTACCACCACTCAAATGAATAAGAGAAGGAAAAGAGACAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR-3UTR GCA 90 bp | GTTGATGGAATAATCTTTGCCTCATCCTCTAATTCACCAATGGAAAGTAAGTGTTGTCATGTTAGTGATTaGTGTGCTAGTAGTAGCCCA | + |
|
Preference number: 2 (lower is better) Translates to: VDGIIFASSSNSPMESKCCHVSD*CASSSP Trigger: TGGGCTACTACTAGCACAGCAATCACTAACATGACA...ACACTTACTTTCCATTGGTGAATTAGAGGATGAGGCAAAGATTATTCCATCAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR-3UTR GCA 90 bp | GTTGATGGAATAATCTTTGCCTCATCCTCTAATTCACCAATGGAAAGTAAGTGTCAACTGCTAAACCATTaGTTCTCAAGTTTTCCAGAC | + |
|
Preference number: 2 (lower is better) Translates to: VDGIIFASSSNSPMESKCQLLNH*FSSFPD Trigger: GTCTGGAAAACTTGAGAAGCAATGGTTTAGCAGTTG...ACACTTACTTTCCATTGGTGAATTAGAGGATGAGGCAAAGATTATTCCATCAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR-3UTR CCA 90 bp | TTAAAGGTTGATGGAATAATCTTTGCCTCATCCTCTAATTCACCAATGGAAAGTGTAGGATTTGTGAACTaGGTTTCTTCCAACCATCAT | + |
|
Preference number: 2 (lower is better) Translates to: LKVDGIIFASSSNSPMESVGFVN*VSSNHH Trigger: ATGATGGTTGGAAGAAACCCAGTTCACAAATCCTAC...ACTTTCCATTGGTGAATTAGAGGATGAGGCAAAGATTATTCCATCAACCTTTAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR CCA 72 bp | GGCGTCCTGGCACTTGGAGGCATGCCAAAGGGTAGGTaGGGACACCTGGCCAGCTCAGAGGGGCAGGCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: GVLALGGMPKGR*GHLASSEGQAS Trigger: ACTTGCCTGCCCCTCTGAGCTGGCCAGGTGTCCCCACCTACCCTTTGGCATGCCTCCAAGTGCCAGGACGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027849.11 |
||
| 3UTR GCA 72 bp | GGCACAGGTTACAACCCTCCCTGTCTGTGGCTGTCATaGCCTTGCCCCAAGACCTGCCAGGCTCTCCTGACG | + |
|
Preference number: 3 (lower is better) Translates to: GTGYNPPCLWLS*PCPKTCQALLT Trigger: CGTCAGGAGAGCCTGGCAGGTCTTGGGGCAAGGGCATGACAGCCACAGACAGGGAGGGTTGTAACCTGTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR CCA 72 bp | GGGAAGTCTTCGGCCCCAATGCAGTCTGTGGCGTCCTaGCACTTGGAGGCATGCCAAAGGGTAGGTGGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: GKSSAPMQSVAS*HLEACQRVGGD Trigger: GTCCCCACCTACCCTTTGGCATGCCTCCAAGTGCCAGGACGCCACAGACTGCATTGGGGCCGAAGACTTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027849.11 |
||
| 3UTR CCA 72 bp | AGGAGCCTGCCAGAAGACCCAAGAGCAGGGCTGGGGTaGAAGAGCAAGGGTGGCTCTCCCTTTAGAGAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: RSLPEDPRAGLG*KSKGGSPFRES Trigger: GGACTCTCTAAAGGGAGAGCCACCCTTGCTCTTCCACCCCAGCCCTGCTCTTGGGTCTTCTGGCAGGCTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
||
| 3UTR GCA 72 bp | ATGACCTTGCCGGCCACTGATTGTCACTGGGAACGTTaGAGACCTGGGTGGTCTGGGTCTTCCTGCCACCTG | + |
|
Preference number: 3 (lower is better) Translates to: MTLPATDCHWER*RPGWSGSSCHL Trigger: CAGGTGGCAGGAAGACCCAGACCACCCAGGTCTGCAACGTTCCCAGTGACAATCAGTGGCCGGCAAGGTCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
||
| 3UTR-3UTR CAA 90 bp | GATGCCCAGGCACAGGTTACAACCCTCCCTGTCTGTGGCTGTCATGCCCTTGCCCTCCCTGCTGCTCGGTaGAGATTGGTAGAGTTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: DAQAQVTTLPVCGCHALALPAAR*RLVEFA Trigger: AGCAAACTCTACCAATCTCAACCGAGCAGCAGGGAG...GGCAAGGGCATGACAGCCACAGACAGGGAGGGTTGTAACCTGTGCCTGGGCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR CCA 72 bp | GCCACTGATTGTCACTGGGAACGTTGCAGACCTGGGTaGTCTGGGTCTTCCTGCCACCTGACAGGGATGAAC | + |
|
Preference number: 3 (lower is better) Translates to: ATDCHWERCRPG*SGSSCHLTGMN Trigger: GTTCATCCCTGTCAGGTGGCAGGAAGACCCAGACCACCCAGGTCTGCAACGTTCCCAGTGACAATCAGTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
||
| 3UTR-3UTR CAA 90 bp | ATGCCCAGGCACAGGTTACAACCCTCCCTGTCTGTGGCTGTCATGCCCTTGCCCAGGCCATCCAACCTGTaGGAGTACCAGTCAGGATTT | + |
|
Preference number: 3 (lower is better) Translates to: MPRHRLQPSLSVAVMPLPRPSNL*EYQSGF Trigger: AAATCCTGACTGGTACTCCAACAGGTTGGATGGCCT...GGGCAAGGGCATGACAGCCACAGACAGGGAGGGTTGTAACCTGTGCCTGGGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR-3UTR CAA 90 bp | AAGTGTAAGGTTCTAGCAGGGTGGTCAGGAAACCTCTTCCTCAGCATTCGTCCAGTGGCTGTCATGCCCTaGCCCCAAGACCTGCCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: KCKVLAGWSGNLFLSIRPVAVMP*PQDLPG Trigger: GCCTGGCAGGTCTTGGGGCAAGGGCATGACAGCCAC...TGGACGAATGCTGAGGAAGAGGTTTCCTGACCACCCTGCTAGAACCTTACACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR CCA 72 bp | ATGCAGAACCATGCAGGTGATGTGTGGGGTGTCCAGTaGGTTCAGGATGCCCAGGCACAGGTTACAACCCTC | + |
|
Preference number: 3 (lower is better) Translates to: MQNHAGDVWGVQ*VQDAQAQVTTL Trigger: GAGGGTTGTAACCTGTGCCTGGGCATCCTGAACCCACTGGACACCCCACACATCACCTGCATGGTTCTGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR-3UTR CAA 90 bp | AGTATGCAGAACCATGCAGGTGATGTGTGGGGTGTCCAGTGGGTTCAGGATGCCGGGAAGAGATTGGTTTaGTTCCTCCCTGCTGCTCGG | + |
|
Preference number: 3 (lower is better) Translates to: SMQNHAGDVWGVQWVQDAGKRLV*FLPAAR Trigger: CCGAGCAGCAGGGAGGAACAAAACCAATCTCTTCCC...GGCATCCTGAACCCACTGGACACCCCACACATCACCTGCATGGTTCTGCATACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR-3UTR CAA 90 bp | GATGCCCAGGCACAGGTTACAACCCTCCCTGTCTGTGGCTGTCATGCCCTTGCCAGCTTTGGGAAGAGATaGGTTTTGTTCCTCCCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: DAQAQVTTLPVCGCHALASFGKR*VLFLPA Trigger: AGCAGGGAGGAACAAAACCAATCTCTTCCCAAAGCT...GGCAAGGGCATGACAGCCACAGACAGGGAGGGTTGTAACCTGTGCCTGGGCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR-3UTR CAA 90 bp | ATGCCCAGGCACAGGTTACAACCCTCCCTGTCTGTGGCTGTCATGCCCTTGCCCAGCTTTGGGAAGAGATaGGTTTTGTTCCTCCCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: MPRHRLQPSLSVAVMPLPSFGKR*VLFLPA Trigger: AGCAGGGAGGAACAAAACCAATCTCTTCCCAAAGCT...GGGCAAGGGCATGACAGCCACAGACAGGGAGGGTTGTAACCTGTGCCTGGGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR-3UTR CAA 90 bp | CTGCCACCTGACAGGGATGAACCGAGTTCCTGGAAGAAGGCAGGACTTGCTCCCAACCTTCCTTGTGTGTaGCTTCCCTTCTTTGAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: LPPDRDEPSSWKKAGLAPNLPCV*LPFFEP Trigger: TGGCTCAAAGAAGGGAAGCAACACACAAGGAAGGTT...GGGAGCAAGTCCTGCCTTCTTCCAGGAACTCGGTTCATCCCTGTCAGGTGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
||
| 3UTR-3UTR CAA 90 bp | AGTATGCAGAACCATGCAGGTGATGTGTGGGGTGTCCAGTGGGTTCAGGATGCCAGGCCATCCAACCTGTaGGAGTACCAGTCAGGATTT | + |
|
Preference number: 3 (lower is better) Translates to: SMQNHAGDVWGVQWVQDARPSNL*EYQSGF Trigger: AAATCCTGACTGGTACTCCAACAGGTTGGATGGCCT...GGCATCCTGAACCCACTGGACACCCCACACATCACCTGCATGGTTCTGCATACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR-3UTR CAA 90 bp | ATGCAGCACAGTATGCAGAACCATGCAGGTGATGTGTGGGGTGTCCAGTGGGTTCTCCCTGCTGCTCGGTaGAGATTGGTAGAGTTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: MQHSMQNHAGDVWGVQWVLPAAR*RLVEFA Trigger: AGCAAACTCTACCAATCTCAACCGAGCAGCAGGGAG...AACCCACTGGACACCCCACACATCACCTGCATGGTTCTGCATACTGTGCTGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR-3UTR CAA 90 bp | ATGCCCAGGCACAGGTTACAACCCTCCCTGTCTGTGGCTGTCATGCCCTTGCCCACCCCTTCCTCACTTTaGGAAGATGTCTTTTTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: MPRHRLQPSLSVAVMPLPTPSSL*EDVFLV Trigger: AACCAAAAAGACATCTTCCAAAAGTGAGGAAGGGGT...GGGCAAGGGCATGACAGCCACAGACAGGGAGGGTTGTAACCTGTGCCTGGGCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR TCA 72 bp | CCTGGCACAAAGGCTGGGAGATGTGGAAAGTACTCTTaGTGGAAAGAGGCCCCTTGTTACTGTTCCCCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: PGTKAGRCGKYS*WKEAPCYCSPV Trigger: CACAGGGGAACAGTAACAAGGGGCCTCTTTCCATCAAGAGTACTTTCCACATCTCCCAGCCTTTGTGCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
||
| 3UTR GCA 72 bp | ACTGTTCCCCTGTGGCTAGGAACCTTCCTTGTGTGTTaGTTCCCTTCTTTGAGCCACCTCTGGCTGGCATTT | + |
|
Preference number: 3 (lower is better) Translates to: TVPLWLGTFLVC*FPSLSHLWLAF Trigger: AAATGCCAGCCAGAGGTGGCTCAAAGAAGGGAAGCAACACACAAGGAAGGTTCCTAGCCACAGGGGAACAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
||
| 3UTR GCA 72 bp | TTCCTGGAAGAAGGCAGGACTTGCTCCCTTTTCTCTTaGTCCCTTGTCGTTGGCGGTAATGGCCCATCCTAT | + |
|
Preference number: 3 (lower is better) Translates to: FLEEGRTCSLFS*SLVVGGNGPSY Trigger: ATAGGATGGGCCATTACCGCCAACGACAAGGGAGCAAGAGAAAAGGGAGCAAGTCCTGCCTTCTTCCAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
||
| 3UTR CCA 72 bp | TTCCCTTCTTTGAGCCACCTCTGGCTGGCATTTACCTaGACTCCCTTGTACCTGCCTCTCTGCCTTTCACAA | + |
|
Preference number: 3 (lower is better) Translates to: FPSLSHLWLAFT*TPLYLPLCLSQ Trigger: TTGTGAAAGGCAGAGAGGCAGGTACAAGGGAGTCCAGGTAAATGCCAGCCAGAGGTGGCTCAAAGAAGGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
||
| 3UTR CCA 72 bp | CTGTTTTTGCTGCACAGTGTGTTAGGATACGGCTGCTaGGAGGCTAAGAGGCTTCTTATGTCGGCAGGCACA | + |
|
Preference number: 3 (lower is better) Translates to: LFLLHSVLGYGC*EAKRLLMSAGT Trigger: TGTGCCTGCCGACATAAGAAGCCTCTTAGCCTCCCAGCAGCCGTATCCTAACACACTGTGCAGCAAAAACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086002.11 ENSMUST00000187313.7 |
||
| 3UTR-3UTR CAA 90 bp | GTCTTCGGCCCCAATGCAGTCTGTGGCGTCCTGGCACTTGGAGGCATGCCAAAGCAAGTCTTTTCTAAGTaGAGAGATTCATTCAGATGC | + |
|
Preference number: 3 (lower is better) Translates to: VFGPNAVCGVLALGGMPKQVFSK*RDSFRC Trigger: GCATCTGAATGAATCTCTCAACTTAGAAAAGACTTG...CTTTGGCATGCCTCCAAGTGCCAGGACGCCACAGACTGCATTGGGGCCGAAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027849.11 |
||
| 3UTR-3UTR CAA 90 bp | AACAGCTTCTGGCACCTTCATAAAATACCTCAGCATAGCTTAGCATTGTTACAGGTGGCTGTCATGCCCTaGCCCCAAGACCTGCCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: NSFWHLHKIPQHSLALLQVAVMP*PQDLPG Trigger: GCCTGGCAGGTCTTGGGGCAAGGGCATGACAGCCAC...CTGTAACAATGCTAAGCTATGCTGAGGTATTTTATGAAGGTGCCAGAAGCTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR TCA 72 bp | TCCCCATCCATGGGTACAGGCACTTTAATGACACAATaGCCTTGCCGGCCACTGATTGTCACTGGGAACGTT | + |
|
Preference number: 3 (lower is better) Translates to: SPSMGTGTLMTQ*PCRPLIVTGNV Trigger: AACGTTCCCAGTGACAATCAGTGGCCGGCAAGGTCATTGTGTCATTAAAGTGCCTGTACCCATGGATGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
||
| 3UTR GCA 72 bp | TTGAGGCCTCTCTGTGATCTGATATGCAGCACAGTATaGAGAACCATGCAGGTGATGTGTGGGGTGTCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: LRPLCDLICSTV*RTMQVMCGVSS Trigger: ACTGGACACCCCACACATCACCTGCATGGTTCTGCATACTGTGCTGCATATCAGATCACAGAGAGGCCTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR-3UTR CAA 90 bp | CATAGAGCAAACACTGAGGTTGGAAAGCTTCGTCTCGTCTCTGTTCTCCCCATCGAGCAAACACTGAGGTaGGAAAGCTTCGTCTCGTCT | + |
|
Preference number: 3 (lower is better) Translates to: HRANTEVGKLRLVSVLPIEQTLR*ESFVSS Trigger: AGACGAGACGAAGCTTTCCAACCTCAGTGTTTGCTC...GATGGGGAGAACAGAGACGAGACGAAGCTTTCCAACCTCAGTGTTTGCTCTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR TCA 72 bp | TACCTAGGGCTTCTCTGGGGACTTTACAAAGCAAACTaGACTCAGCTAGCTGCAGGAGGGAGTGTGTTAGTG | + |
|
Preference number: 3 (lower is better) Translates to: YLGLLWGLYKAN*TQLAAGGSVLV Trigger: CACTAACACACTCCCTCCTGCAGCTAGCTGAGTTCAGTTTGCTTTGTAAAGTCCCCAGAGAAGCCCTAGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
||
| 3UTR TCA 72 bp | GCAAAGGAAGAGTGTGCACGTGTCCAGGTGTGCAGATaGAAAGACAGATATGAACGTGAACCCGAGGAATGG | + |
|
Preference number: 3 (lower is better) Translates to: AKEECARVQVCR*KDRYEREPEEW Trigger: CCATTCCTCGGGTTCACGTTCATATCTGTCTTTTCATCTGCACACCTGGACACGTGCACACTCTTCCTTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR CCA 72 bp | CATGAAGGTAAGACATCTTACCGTTCCTGGAGTGCCTaGCACAAAGGCTGGGAGATGTGGAAAGTACTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: HEGKTSYRSWSA*HKGWEMWKVLL Trigger: CAAGAGTACTTTCCACATCTCCCAGCCTTTGTGCCAGGCACTCCAGGAACGGTAAGATGTCTTACCTTCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
||
| 3UTR-3UTR CAA 90 bp | AGTATGCAGAACCATGCAGGTGATGTGTGGGGTGTCCAGTGGGTTCAGGATGCCTTGGTTACTCTAGCTTaGGGAAGAGATTGGTTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: SMQNHAGDVWGVQWVQDALVTLA*GRDWFC Trigger: ACAAAACCAATCTCTTCCCAAAGCTAGAGTAACCAA...GGCATCCTGAACCCACTGGACACCCCACACATCACCTGCATGGTTCTGCATACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR-3UTR CAA 90 bp | CTAGCAGGGTGGTCAGGAAACCTCTTCCTCAGCATTCGTCCAGTTCATACCCGGCCTTCTCTTATTCATTaGAGTGGTGGTACCTTATTC | + |
|
Preference number: 3 (lower is better) Translates to: LAGWSGNLFLSIRPVHTRPSLIH*SGGTLF Trigger: GAATAAGGTACCACCACTCAAATGAATAAGAGAAGG...CCGGGTATGAACTGGACGAATGCTGAGGAAGAGGTTTCCTGACCACCCTGCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR-3UTR CAA 90 bp | AAGTGTAAGGTTCTAGCAGGGTGGTCAGGAAACCTCTTCCTCAGCATTCGTCCATTCTGCTCTTGGCCTTaGCTGGAAGCAGTAAACTTG | + |
|
Preference number: 3 (lower is better) Translates to: KCKVLAGWSGNLFLSIRPFCSWP*LEAVNL Trigger: CAAGTTTACTGCTTCCAGCAAAGGCCAAGAGCAGAA...TGGACGAATGCTGAGGAAGAGGTTTCCTGACCACCCTGCTAGAACCTTACACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR-3UTR CAA 90 bp | AAGTGTAAGGTTCTAGCAGGGTGGTCAGGAAACCTCTTCCTCAGCATTCGTCCAAACCAATTCCTTAGTTaGACCCTTCTGCTCTTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: KCKVLAGWSGNLFLSIRPNQFLS*TLLLLA Trigger: GGCCAAGAGCAGAAGGGTCAAACTAAGGAATTGGTT...TGGACGAATGCTGAGGAAGAGGTTTCCTGACCACCCTGCTAGAACCTTACACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR TCA 72 bp | TCCAGGGATGACGTTCTGTGTTCAGTGCTCTGGAACTaGAGAAGACAAATGTGGCAAGTGAGAGAACCATCC | + |
|
Preference number: 3 (lower is better) Translates to: SRDDVLCSVLWN*RRQMWQVREPS Trigger: GGATGGTTCTCTCACTTGCCACATTTGTCTTCTTCAGTTCCAGAGCACTGAACACAGAACGTCATCCCTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
||
| 3UTR-3UTR CAA 90 bp | ATGCTGTATGTATTTGGGGTCCTGTTTATAGAGTTAGGGAGGGTTGGGTTGGGAAGGCCATCCAACCTGTaGGAGTACCAGTCAGGATTT | + |
|
Preference number: 3 (lower is better) Translates to: MLYVFGVLFIELGRVGLGRPSNL*EYQSGF Trigger: AAATCCTGACTGGTACTCCAACAGGTTGGATGGCCT...TCCCAACCCAACCCTCCCTAACTCTATAAACAGGACCCCAAATACATACAGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR-3UTR CAA 90 bp | CTTCTGCTCTTGGCCTTTGCTGGAAGCAGTAAACTTGAGTATATCACGTGTCGAGAGCAAACACTGAGGTaGGAAAGCTTCGTCTCGTCT | + |
|
Preference number: 3 (lower is better) Translates to: LLLLAFAGSSKLEYITCREQTLR*ESFVSS Trigger: AGACGAGACGAAGCTTTCCAACCTCAGTGTTTGCTC...TCGACACGTGATATACTCAAGTTTACTGCTTCCAGCAAAGGCCAAGAGCAGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR TCA 72 bp | AGACAAATGTGGCAAGTGAGAGAACCATCCTCGTCATaGAATGGTGGCTGGGAAATGAATAAACTGAGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: RQMWQVREPSSS*NGGWEMNKLRG Trigger: CCCCCTCAGTTTATTCATTTCCCAGCCACCATTTCATGACGAGGATGGTTCTCTCACTTGCCACATTTGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
||
| 3UTR CCA 72 bp | GACTCCCTTGTACCTGCCTCTCTGCCTTTCACAATGTaGCCTAATTACATGTTACCTCAACACTGCAAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: DSLVPASLPFTM*PNYMLPQHCKV Trigger: CACTTTGCAGTGTTGAGGTAACATGTAATTAGGCCACATTGTGAAAGGCAGAGAGGCAGGTACAAGGGAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
||
| 3UTR CCA 72 bp | TCACCAATGGAAAGTAAGTGTAAGGTTCTAGCAGGGTaGTCAGGAAACCTCTTCCTCAGCATTCGTCCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: SPMESKCKVLAG*SGNLFLSIRPV Trigger: AACTGGACGAATGCTGAGGAAGAGGTTTCCTGACCACCCTGCTAGAACCTTACACTTACTTTCCATTGGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR-3UTR CAA 90 bp | TTATATCTGTCTTGCCAAAGGAAACTTGATATTCCCTATGAATGGGTTGGGGGTCTCCCTGCTGCTCGGTaGAGATTGGTAGAGTTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: LYLSCQRKLDIPYEWVGGLPAAR*RLVEFA Trigger: AGCAAACTCTACCAATCTCAACCGAGCAGCAGGGAG...ACCCCCAACCCATTCATAGGGAATATCAAGTTTCCTTTGGCAAGACAGATATAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR-3UTR CAA 90 bp | TCTGTCTCTTTTCCTTCTCTTATTCATTTGAGTGGTGGTACCTTATTCTGTGAGGGGAAGAGATTGGTTTaGTTCCTCCCTGCTGCTCGG | + |
|
Preference number: 3 (lower is better) Translates to: SVSFPSLIHLSGGTLFCEGKRLV*FLPAAR Trigger: CCGAGCAGCAGGGAGGAACAAAACCAATCTCTTCCC...CTCACAGAATAAGGTACCACCACTCAAATGAATAAGAGAAGGAAAAGAGACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR GCA 72 bp | AGGCAAGTCTTTTCTAAGTTGAGAGATTCATTCAGATaGATGCCCAGGAGTTTTGGCCCTTGCTCACTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: RQVFSKLRDSFR*MPRSFGPCSLL Trigger: CAGAAGTGAGCAAGGGCCAAAACTCCTGGGCATGCATCTGAATGAATCTCTCAACTTAGAAAAGACTTGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027849.11 |
||
| 3UTR CCA 72 bp | CTGTCTTGCCAAAGGAAACTTGATATTCCCTATGAATaGGTTGGGGGTTTGAGGCCTCTCTGTGATCTGATA | + |
|
Preference number: 3 (lower is better) Translates to: LSCQRKLDIPYE*VGGLRPLCDLI Trigger: TATCAGATCACAGAGAGGCCTCAAACCCCCAACCCATTCATAGGGAATATCAAGTTTCCTTTGGCAAGACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR-3UTR CAA 90 bp | AAGTGTAAGGTTCTAGCAGGGTGGTCAGGAAACCTCTTCCTCAGCATTCGTCCAGAACTTGAGTGGGATTaGATTTTGATACCAAAGACA | + |
|
Preference number: 3 (lower is better) Translates to: KCKVLAGWSGNLFLSIRPELEWD*ILIPKT Trigger: TGTCTTTGGTATCAAAATCAAATCCCACTCAAGTTC...TGGACGAATGCTGAGGAAGAGGTTTCCTGACCACCCTGCTAGAACCTTACACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR GCA 72 bp | GATTCATTCAGATGCATGCCCAGGAGTTTTGGCCCTTaGTCACTTCTGAGTAGAGCATGCATGAAAGAAATT | + |
|
Preference number: 3 (lower is better) Translates to: DSFRCMPRSFGP*SLLSRACMKEI Trigger: AATTTCTTTCATGCATGCTCTACTCAGAAGTGAGCAAGGGCCAAAACTCCTGGGCATGCATCTGAATGAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027849.11 |
||
| 3UTR-3UTR CAA 90 bp | TTATATCTGTCTTGCCAAAGGAAACTTGATATTCCCTATGAATGGGTTGGGGGTAGCTTTGGGAAGAGATaGGTTTTGTTCCTCCCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: LYLSCQRKLDIPYEWVGGSFGKR*VLFLPA Trigger: AGCAGGGAGGAACAAAACCAATCTCTTCCCAAAGCT...ACCCCCAACCCATTCATAGGGAATATCAAGTTTCCTTTGGCAAGACAGATATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR-3UTR CAA 90 bp | AACAGCTTCTGGCACCTTCATAAAATACCTCAGCATAGCTTAGCATTGTTACAGAGCTTTGGGAAGAGATaGGTTTTGTTCCTCCCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: NSFWHLHKIPQHSLALLQSFGKR*VLFLPA Trigger: AGCAGGGAGGAACAAAACCAATCTCTTCCCAAAGCT...CTGTAACAATGCTAAGCTATGCTGAGGTATTTTATGAAGGTGCCAGAAGCTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR-3UTR CAA 90 bp | CTTCTGCTCTTGGCCTTTGCTGGAAGCAGTAAACTTGAGTATATCACGTGTCGATTGGTTACTCTAGCTTaGGGAAGAGATTGGTTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: LLLLAFAGSSKLEYITCRLVTLA*GRDWFC Trigger: ACAAAACCAATCTCTTCCCAAAGCTAGAGTAACCAA...TCGACACGTGATATACTCAAGTTTACTGCTTCCAGCAAAGGCCAAGAGCAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR-3UTR CAA 90 bp | CAAGTTTTCCAGACACTCAAAGGCCATAGAGCAAACACTGAGGTTGGAAAGCTTACCCCTTCCTCACTTTaGGAAGATGTCTTTTTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: QVFQTLKGHRANTEVGKLTPSSL*EDVFLV Trigger: AACCAAAAAGACATCTTCCAAAAGTGAGGAAGGGGT...AAGCTTTCCAACCTCAGTGTTTGCTCTATGGCCTTTGAGTGTCTGGAAAACTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR-3UTR CAA 90 bp | GTTCATACCCGGTGTATGGTAGGATTTGTGAACTGGGTTTCTTCCAACCATCATACCCCTTCCTCACTTTaGGAAGATGTCTTTTTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: VHTRCMVGFVNWVSSNHHTPSSL*EDVFLV Trigger: AACCAAAAAGACATCTTCCAAAAGTGAGGAAGGGGT...ATGATGGTTGGAAGAAACCCAGTTCACAAATCCTACCATACACCGGGTATGAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR-3UTR CAA 90 bp | TCTCTTATTCATTTGAGTGGTGGTACCTTATTCTGTGAGAATAATGCTCATGGGGAGCAAACACTGAGGTaGGAAAGCTTCGTCTCGTCT | + |
|
Preference number: 3 (lower is better) Translates to: SLIHLSGGTLFCENNAHGEQTLR*ESFVSS Trigger: AGACGAGACGAAGCTTTCCAACCTCAGTGTTTGCTC...CCCATGAGCATTATTCTCACAGAATAAGGTACCACCACTCAAATGAATAAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR-3UTR CAA 90 bp | AACAGCTTCTGGCACCTTCATAAAATACCTCAGCATAGCTTAGCATTGTTACAGAAAACCTTTCTGCCCTaGTTCTGTCTGGGACAGACT | + |
|
Preference number: 3 (lower is better) Translates to: NSFWHLHKIPQHSLALLQKTFLP*FCLGQT Trigger: AGTCTGTCCCAGACAGAACAAGGGCAGAAAGGTTTT...CTGTAACAATGCTAAGCTATGCTGAGGTATTTTATGAAGGTGCCAGAAGCTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR-3UTR CAA 90 bp | TTCTGCTCTTGGCCTTTGCTGGAAGCAGTAAACTTGAGTATATCACGTGTCGATTTGGTTACTCTAGCTTaGGGAAGAGATTGGTTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: FCSWPLLEAVNLSISRVDLVTLA*GRDWFC Trigger: ACAAAACCAATCTCTTCCCAAAGCTAGAGTAACCAA...ATCGACACGTGATATACTCAAGTTTACTGCTTCCAGCAAAGGCCAAGAGCAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR-3UTR CAA 90 bp | TACCCGGTGTATGGTAGGATTTGTGAACTGGGTTTCTTCCAACCATCATTCTCTAACCAAGCCAAGAAGTaGAAAGCTAACACAAGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: YPVYGRICELGFFQPSFSNQAKK*KANTSQ Trigger: TTGACTTGTGTTAGCTTTCAACTTCTTGGCTTGGTT...AGAGAATGATGGTTGGAAGAAACCCAGTTCACAAATCCTACCATACACCGGGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR-3UTR CAA 90 bp | TACCCGGTGTATGGTAGGATTTGTGAACTGGGTTTCTTCCAACCATCATTCTCTCCTTCTCTTATTCATTaGAGTGGTGGTACCTTATTC | + |
|
Preference number: 3 (lower is better) Translates to: YPVYGRICELGFFQPSFSPSLIH*SGGTLF Trigger: GAATAAGGTACCACCACTCAAATGAATAAGAGAAGG...AGAGAATGATGGTTGGAAGAAACCCAGTTCACAAATCCTACCATACACCGGGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR CCA 72 bp | TATTCTGTGAGAATAATGCTCATGGGGAACAGCTTCTaGCACCTTCATAAAATACCTCAGCATAGCTTAGCA | + |
|
Preference number: 3 (lower is better) Translates to: YSVRIMLMGNSF*HLHKIPQHSLA Trigger: TGCTAAGCTATGCTGAGGTATTTTATGAAGGTGCCAGAAGCTGTTCCCCATGAGCATTATTCTCACAGAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR-3UTR CAA 90 bp | TTCTGCTCTTGGCCTTTGCTGGAAGCAGTAAACTTGAGTATATCACGTGTCGATGAACTTGAGTGGGATTaGATTTTGATACCAAAGACA | + |
|
Preference number: 3 (lower is better) Translates to: FCSWPLLEAVNLSISRVDELEWD*ILIPKT Trigger: TGTCTTTGGTATCAAAATCAAATCCCACTCAAGTTC...ATCGACACGTGATATACTCAAGTTTACTGCTTCCAGCAAAGGCCAAGAGCAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR-3UTR CAA 90 bp | TTAAAGGTTGATGGAATAATCTTTGCCTCATCCTCTAATTCACCAATGGAAAGTAAAACCTTTCTGCCCTaGTTCTGTCTGGGACAGACT | + |
|
Preference number: 3 (lower is better) Translates to: LKVDGIIFASSSNSPMESKTFLP*FCLGQT Trigger: AGTCTGTCCCAGACAGAACAAGGGCAGAAAGGTTTT...ACTTTCCATTGGTGAATTAGAGGATGAGGCAAAGATTATTCCATCAACCTTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR-3UTR CAA 90 bp | TATATCTGTCTTGCCAAAGGAAACTTGATATTCCCTATGAATGGGTTGGGGGTTAACCAAGCCAAGAAGTaGAAAGCTAACACAAGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: YICLAKGNLIFPMNGLGVNQAKK*KANTSQ Trigger: TTGACTTGTGTTAGCTTTCAACTTCTTGGCTTGGTT...AACCCCCAACCCATTCATAGGGAATATCAAGTTTCCTTTGGCAAGACAGATATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR-3UTR CAA 90 bp | TTAAAGGTTGATGGAATAATCTTTGCCTCATCCTCTAATTCACCAATGGAAAGTAACCAATTCCTTAGTTaGACCCTTCTGCTCTTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: LKVDGIIFASSSNSPMESNQFLS*TLLLLA Trigger: GGCCAAGAGCAGAAGGGTCAAACTAAGGAATTGGTT...ACTTTCCATTGGTGAATTAGAGGATGAGGCAAAGATTATTCCATCAACCTTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR-3UTR CAA 90 bp | TCTCTTATTCATTTGAGTGGTGGTACCTTATTCTGTGAGAATAATGCTCATGGGAACCAAGCCAAGAAGTaGAAAGCTAACACAAGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: SLIHLSGGTLFCENNAHGNQAKK*KANTSQ Trigger: TTGACTTGTGTTAGCTTTCAACTTCTTGGCTTGGTT...CCCATGAGCATTATTCTCACAGAATAAGGTACCACCACTCAAATGAATAAGAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR GCA 72 bp | AGGAGTTTTGGCCCTTGCTCACTTCTGAGTAGAGCATaGATGAAAGAAATTGGAACATCAGATTTTTCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: RSFGPCSLLSRA*MKEIGTSDFSK Trigger: TTTTGAAAAATCTGATGTTCCAATTTCTTTCATGCATGCTCTACTCAGAAGTGAGCAAGGGCCAAAACTCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027849.11 |
||
| 3UTR GCA 72 bp | ATCCTATTTTCTGTGTCAGTTTGTACACAAGTTATTTaGACTCTTAAAAGCATGGTCTTCATGAAGGTAAGA | + |
|
Preference number: 3 (lower is better) Translates to: ILFSVSVCTQVI*TLKSMVFMKVR Trigger: TCTTACCTTCATGAAGACCATGCTTTTAAGAGTGCAAATAACTTGTGTACAAACTGACACAGAAAATAGGAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
||
| CDS-3UTR CCA 90 bp | GCAGTCTGTGGCGTCCTGGCACTTGGAGGCATGCCAAAGGGTAGGTGGGGACACCTGTGCCTCTGCTCCTaGGAACCGCACGTGGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: AVCGVLALGGMPKGRWGHLCLCS*EPHVED Trigger: ATCCTCCACGTGCGGTTCCCAGGAGCAGAGGCACAG...GTGTCCCCACCTACCCTTTGGCATGCCTCCAAGTGCCAGGACGCCACAGACTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027849.11 |
||
| 3UTR CAA 72 bp | TCTTCGGCCCCAATGCAGTCTGTGGCGTCCTGGCACTaGGAGGCATGCCAAAGGGTAGGTGGGGACACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSAPMQSVASWH*EACQRVGGDTW Trigger: CCAGGTGTCCCCACCTACCCTTTGGCATGCCTCCAAGTGCCAGGACGCCACAGACTGCATTGGGGCCGAAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027849.11 |
||
| CDS-3UTR CCA 90 bp | GGCACAACTCATGTGACAGCAGCCAGGGTCATCACCAGAGCTGAGCACAGGGCCCCTGGGAACCGCACGTaGAGGATGCAGGCGAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: GTTHVTAARVITRAEHRAPGNRT*RMQART Trigger: TGTTCTCGCCTGCATCCTCCACGTGCGGTTCCCAGG...GGCCCTGTGCTCAGCTCTGGTGATGACCCTGGCTGCTGTCACATGAGTTGTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086002.11 ENSMUST00000187313.7 |
||
| CDS-3UTR GCA 90 bp | CTTCGGCCCCAATGCAGTCTGTGGCGTCCTGGCACTTGGAGGCATGCCAAAGGGACCGCACGTGGAGGATaGAGGCGAGAACAGACACTT | + |
|
Preference number: 4 (lower is better) Translates to: LRPQCSLWRPGTWRHAKGTARGG*RREQTL Trigger: AAGTGTCTGTTCTCGCCTGCATCCTCCACGTGCGGT...CCCTTTGGCATGCCTCCAAGTGCCAGGACGCCACAGACTGCATTGGGGCCGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027849.11 |
||
| CDS-3UTR GCA 90 bp | GGCACAACTCATGTGACAGCAGCCAGGGTCATCACCAGAGCTGAGCACAGGGCCAAAGCTCTGTGCCTCTaGTCCTGGGAACCGCACGTG | + |
|
Preference number: 4 (lower is better) Translates to: GTTHVTAARVITRAEHRAKALCL*SWEPHV Trigger: CACGTGCGGTTCCCAGGAGCAGAGGCACAGAGCTTT...GGCCCTGTGCTCAGCTCTGGTGATGACCCTGGCTGCTGTCACATGAGTTGTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086002.11 ENSMUST00000187313.7 |
||
| CDS-3UTR GCA 90 bp | ATGCCCAGGCACAGGTTACAACCCTCCCTGTCTGTGGCTGTCATGCCCTTGCCCCAGACCAAAGCTCTGTaGCTCTGCTCCTGGGAACCG | + |
|
Preference number: 4 (lower is better) Translates to: MPRHRLQPSLSVAVMPLPQTKAL*LCSWEP Trigger: CGGTTCCCAGGAGCAGAGGCACAGAGCTTTGGTCTG...GGGCAAGGGCATGACAGCCACAGACAGGGAGGGTTGTAACCTGTGCCTGGGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| CDS-3UTR GCA 90 bp | GATGCCCAGGCACAGGTTACAACCCTCCCTGTCTGTGGCTGTCATGCCCTTGCCAGCTGGTTGGGGTCCTaGAGGTTGGCAGCAGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: DAQAQVTTLPVCGCHALASWLGS*RLAAVS Trigger: AGAGACTGCTGCCAACCTGCAGGACCCCAACCAGCT...GGCAAGGGCATGACAGCCACAGACAGGGAGGGTTGTAACCTGTGCCTGGGCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| CDS-3UTR GCA 90 bp | GCAGTCTGTGGCGTCCTGGCACTTGGAGGCATGCCAAAGGGTAGGTGGGGACACTCCTCCTCTGCTGTTTaGCTCCCATCTCTGGATCCC | + |
|
Preference number: 4 (lower is better) Translates to: AVCGVLALGGMPKGRWGHSSSAV*LPSLDP Trigger: GGGATCCAGAGATGGGAGGCAAACAGCAGAGGAGGA...GTGTCCCCACCTACCCTTTGGCATGCCTCCAAGTGCCAGGACGCCACAGACTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027849.11 |
||
| CDS-3UTR CCA 90 bp | GCAAGGAGAGGAGCCTGCCAGAAGACCCAAGAGCAGGGCTGGGGTGGAAGAGCACATTGTAGAGCTGGTTaGGGTCCTGCAGGTTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ARRGACQKTQEQGWGGRAHCRAG*GPAGWQ Trigger: CTGCCAACCTGCAGGACCCCAACCAGCTCTACAATG...TGCTCTTCCACCCCAGCCCTGCTCTTGGGTCTTCTGGCAGGCTCCTCTCCTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
||
| CDS-3UTR GCA 90 bp | TCTTATGTCGGCAGGCACAACTCATGTGACAGCAGCCAGGGTCATCACCAGAGCGGCTACTCTGCTGGGTaGTTTCACCTTTGGGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SYVGRHNSCDSSQGHHQSGYSAG*FHLWGG Trigger: CCCGCCCCAAAGGTGAAAGCACCCAGCAGAGTAGCC...GCTCTGGTGATGACCCTGGCTGCTGTCACATGAGTTGTGCCTGCCGACATAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086002.11 ENSMUST00000187313.7 |
||
| CDS-3UTR CCA 90 bp | GATACGGCTGCTGGGAGGCTAAGAGGCTTCTTATGTCGGCAGGCACAACTCATGCTGTGCCTCTGCTCCTaGGAACCGCACGTGGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: DTAAGRLRGFLCRQAQLMLCLCS*EPHVED Trigger: ATCCTCCACGTGCGGTTCCCAGGAGCAGAGGCACAG...CATGAGTTGTGCCTGCCGACATAAGAAGCCTCTTAGCCTCCCAGCAGCCGTATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086002.11 ENSMUST00000187313.7 |
||
| CDS-3UTR CCA 90 bp | GGCACAACTCATGTGACAGCAGCCAGGGTCATCACCAGAGCTGAGCACAGGGCCGATTGGCTACTCTGCTaGGTGCTTTCACCTTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GTTHVTAARVITRAEHRADWLLC*VLSPLG Trigger: CCCCAAAGGTGAAAGCACCCAGCAGAGTAGCCAATC...GGCCCTGTGCTCAGCTCTGGTGATGACCCTGGCTGCTGTCACATGAGTTGTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086002.11 ENSMUST00000187313.7 |
||
| CDS-3UTR CCA 90 bp | GCAGGCACAACTCATGTGACAGCAGCCAGGGTCATCACCAGAGCTGAGCACAGGACGCTGGCACAGGATTaGCTACTCTGCTGGGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: AGTTHVTAARVITRAEHRTLAQD*LLCWVL Trigger: AAGCACCCAGCAGAGTAGCCAATCCTGTGCCAGCGT...CCTGTGCTCAGCTCTGGTGATGACCCTGGCTGCTGTCACATGAGTTGTGCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086002.11 ENSMUST00000187313.7 |
||
| CDS-3UTR TCA 90 bp | GCAGTCTGTGGCGTCCTGGCACTTGGAGGCATGCCAAAGGGTAGGTGGGGACACGGTCCTTGTGAGTTCTaGACCTTCTCTCTCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AVCGVLALGGMPKGRWGHGPCEF*TFSLSS Trigger: AGAAGAGAGAGAGAAGGTTCAGAACTCACAAGGACC...GTGTCCCCACCTACCCTTTGGCATGCCTCCAAGTGCCAGGACGCCACAGACTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027849.11 |
||
| CDS-3UTR GCA 90 bp | AACACTGAGGTTGGAAAGCTTCGTCTCGTCTCTGTTCTCCCCATCGGCCTCACCAAAGCTCTGTGCCTCTaGTCCTGGGAACCGCACGTG | + |
|
Preference number: 4 (lower is better) Translates to: NTEVGKLRLVSVLPIGLTKALCL*SWEPHV Trigger: CACGTGCGGTTCCCAGGAGCAGAGGCACAGAGCTTT...GGTGAGGCCGATGGGGAGAACAGAGACGAGACGAAGCTTTCCAACCTCAGTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| CDS-3UTR GCA 90 bp | CCTTCTTTGAGCCACCTCTGGCTGGCATTTACCTGGACTCCCTTGTACCTGCCTCAGACCAAAGCTCTGTaGCTCTGCTCCTGGGAACCG | + |
|
Preference number: 4 (lower is better) Translates to: PSLSHLWLAFTWTPLYLPQTKAL*LCSWEP Trigger: CGGTTCCCAGGAGCAGAGGCACAGAGCTTTGGTCTG...AGGCAGGTACAAGGGAGTCCAGGTAAATGCCAGCCAGAGGTGGCTCAAAGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
||
| CDS-3UTR GCA 90 bp | GAGGCTAAGAGGCTTCTTATGTCGGCAGGCACAACTCATGTGACAGCAGCCAGGCAGACCAAAGCTCTGTaGCTCTGCTCCTGGGAACCG | + |
|
Preference number: 4 (lower is better) Translates to: EAKRLLMSAGTTHVTAARQTKAL*LCSWEP Trigger: CGGTTCCCAGGAGCAGAGGCACAGAGCTTTGGTCTG...CCTGGCTGCTGTCACATGAGTTGTGCCTGCCGACATAAGAAGCCTCTTAGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086002.11 ENSMUST00000187313.7 |
||
| CDS-3UTR GCA 90 bp | GCAGTCTGTGGCGTCCTGGCACTTGGAGGCATGCCAAAGGGTAGGTGGGGACACACTCCTGCTGAATTTTaGTCTCAGGTACAGGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: AVCGVLALGGMPKGRWGHTPAEF*SQVQGC Trigger: ACAGCCCTGTACCTGAGAGCAAAATTCAGCAGGAGT...GTGTCCCCACCTACCCTTTGGCATGCCTCCAAGTGCCAGGACGCCACAGACTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027849.11 |
||
| CDS-3UTR TCA 90 bp | GATGCCCAGGCACAGGTTACAACCCTCCCTGTCTGTGGCTGTCATGCCCTTGCCTCTCTGCACTCCTGCTaGATTTTGCTCTCAGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: DAQAQVTTLPVCGCHALASLHSC*ILLSGT Trigger: TGTACCTGAGAGCAAAATTCAGCAGGAGTGCAGAGA...GGCAAGGGCATGACAGCCACAGACAGGGAGGGTTGTAACCTGTGCCTGGGCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| CDS-3UTR GCA 90 bp | TCTTATGTCGGCAGGCACAACTCATGTGACAGCAGCCAGGGTCATCACCAGAGCACCGCACGTGGAGGATaGAGGCGAGAACAGACACTT | + |
|
Preference number: 4 (lower is better) Translates to: SYVGRHNSCDSSQGHHQSTARGG*RREQTL Trigger: AAGTGTCTGTTCTCGCCTGCATCCTCCACGTGCGGT...GCTCTGGTGATGACCCTGGCTGCTGTCACATGAGTTGTGCCTGCCGACATAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086002.11 ENSMUST00000187313.7 |
||
| CDS-3UTR GCA 90 bp | ATGCAGCACAGTATGCAGAACCATGCAGGTGATGTGTGGGGTGTCCAGTGGGTTAAAGCTCTGTGCCTCTaGTCCTGGGAACCGCACGTG | + |
|
Preference number: 4 (lower is better) Translates to: MQHSMQNHAGDVWGVQWVKALCL*SWEPHV Trigger: CACGTGCGGTTCCCAGGAGCAGAGGCACAGAGCTTT...AACCCACTGGACACCCCACACATCACCTGCATGGTTCTGCATACTGTGCTGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| CDS-3UTR GCA 90 bp | AAGAGGCTTCTTATGTCGGCAGGCACAACTCATGTGACAGCAGCCAGGGTCATCAGCTGGTTGGGGTCCTaGAGGTTGGCAGCAGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KRLLMSAGTTHVTAARVISWLGS*RLAAVS Trigger: AGAGACTGCTGCCAACCTGCAGGACCCCAACCAGCT...GATGACCCTGGCTGCTGTCACATGAGTTGTGCCTGCCGACATAAGAAGCCTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086002.11 ENSMUST00000187313.7 |
||
| CDS-3UTR GCA 90 bp | TACGGCTGCTGGGAGGCTAAGAGGCTTCTTATGTCGGCAGGCACAACTCATGTGTCCTCCTCTGCTGTTTaGCTCCCATCTCTGGATCCC | + |
|
Preference number: 4 (lower is better) Translates to: YGCWEAKRLLMSAGTTHVSSSAV*LPSLDP Trigger: GGGATCCAGAGATGGGAGGCAAACAGCAGAGGAGGA...CACATGAGTTGTGCCTGCCGACATAAGAAGCCTCTTAGCCTCCCAGCAGCCGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086002.11 ENSMUST00000187313.7 |
||
| CDS-3UTR GCA 90 bp | CAAAGAAAAGGGAAGTCTTCGGCCCCAATGCAGTCTGTGGCGTCCTGGCACTTGGGGTTCCTCCTCCTCTaGTGTTTGCCTCCCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QRKGKSSAPMQSVASWHLGFLLL*CLPPIS Trigger: AGAGATGGGAGGCAAACAGCAGAGGAGGAGGAACCC...CAAGTGCCAGGACGCCACAGACTGCATTGGGGCCGAAGACTTCCCTTTTCTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027849.11 |
||
| CDS-3UTR GCA 90 bp | AGTATGCAGAACCATGCAGGTGATGTGTGGGGTGTCCAGTGGGTTCAGGATGCCGGGTTCCTCCTCCTCTaGTGTTTGCCTCCCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SMQNHAGDVWGVQWVQDAGFLLL*CLPPIS Trigger: AGAGATGGGAGGCAAACAGCAGAGGAGGAGGAACCC...GGCATCCTGAACCCACTGGACACCCCACACATCACCTGCATGGTTCTGCATACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| CDS-3UTR GCA 90 bp | GCAGTCTGTGGCGTCCTGGCACTTGGAGGCATGCCAAAGGGTAGGTGGGGACACCTTGTCTTTCTGCAGTaGATTGTATACGCCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: AVCGVLALGGMPKGRWGHLVFLQ*IVYAFL Trigger: CAGGAAGGCGTATACAATGCACTGCAGAAAGACAAG...GTGTCCCCACCTACCCTTTGGCATGCCTCCAAGTGCCAGGACGCCACAGACTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027849.11 |
||
| CDS-3UTR CCA 90 bp | GAGCAAACACTGAGGTTGGAAAGCTTCGTCTCGTCTCTGTTCTCCCCATCGGCCCATTGTAGAGCTGGTTaGGGTCCTGCAGGTTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: EQTLRLESFVSSLFSPSAHCRAG*GPAGWQ Trigger: CTGCCAACCTGCAGGACCCCAACCAGCTCTACAATG...GGCCGATGGGGAGAACAGAGACGAGACGAAGCTTTCCAACCTCAGTGTTTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| CDS-3UTR CCA 90 bp | TACGGCTGCTGGGAGGCTAAGAGGCTTCTTATGTCGGCAGGCACAACTCATGTGTTGTATACGCCTTCCTaGGGGTTCCTCCTCCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: YGCWEAKRLLMSAGTTHVLYTPS*GFLLLC Trigger: GCAGAGGAGGAGGAACCCCCAGGAAGGCGTATACAA...CACATGAGTTGTGCCTGCCGACATAAGAAGCCTCTTAGCCTCCCAGCAGCCGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086002.11 ENSMUST00000187313.7 |
||
| CDS-3UTR CCA 90 bp | AACACTGAGGTTGGAAAGCTTCGTCTCGTCTCTGTTCTCCCCATCGGCCTCACCTTGTATACGCCTTCCTaGGGGTTCCTCCTCCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NTEVGKLRLVSVLPIGLTLYTPS*GFLLLC Trigger: GCAGAGGAGGAGGAACCCCCAGGAAGGCGTATACAA...GGTGAGGCCGATGGGGAGAACAGAGACGAGACGAAGCTTTCCAACCTCAGTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR CAA 72 bp | ACAGGGATGAACCGAGTTCCTGGAAGAAGGCAGGACTaGCTCCCTTTTCTCTTGCTCCCTTGTCGTTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: TGMNRVPGRRQD*LPFLLLPCRWR Trigger: CCGCCAACGACAAGGGAGCAAGAGAAAAGGGAGCAAGTCCTGCCTTCTTCCAGGAACTCGGTTCATCCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
||
| CDS-3UTR GCA 90 bp | ACTCTTGATGGAAAGAGGCCCCTTGTTACTGTTCCCCTGTGGCTAGGAACCTTCAAAGCTCTGTGCCTCTaGTCCTGGGAACCGCACGTG | + |
|
Preference number: 4 (lower is better) Translates to: TLDGKRPLVTVPLWLGTFKALCL*SWEPHV Trigger: CACGTGCGGTTCCCAGGAGCAGAGGCACAGAGCTTT...GAAGGTTCCTAGCCACAGGGGAACAGTAACAAGGGGCCTCTTTCCATCAAGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
||
| CDS-3UTR GCA 90 bp | ACTCTTGATGGAAAGAGGCCCCTTGTTACTGTTCCCCTGTGGCTAGGAACCTTCAGCTGGTTGGGGTCCTaGAGGTTGGCAGCAGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TLDGKRPLVTVPLWLGTFSWLGS*RLAAVS Trigger: AGAGACTGCTGCCAACCTGCAGGACCCCAACCAGCT...GAAGGTTCCTAGCCACAGGGGAACAGTAACAAGGGGCCTCTTTCCATCAAGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
||
| CDS-3UTR GCA 90 bp | CTGGCTGGCATTTACCTGGACTCCCTTGTACCTGCCTCTCTGCCTTTCACAATGTCCTCCTCTGCTGTTTaGCTCCCATCTCTGGATCCC | + |
|
Preference number: 4 (lower is better) Translates to: LAGIYLDSLVPASLPFTMSSSAV*LPSLDP Trigger: GGGATCCAGAGATGGGAGGCAAACAGCAGAGGAGGA...CATTGTGAAAGGCAGAGAGGCAGGTACAAGGGAGTCCAGGTAAATGCCAGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
||
| CDS-3UTR GCA 90 bp | AAGAGGCTTCTTATGTCGGCAGGCACAACTCATGTGACAGCAGCCAGGGTCATCGGGTTCCTCCTCCTCTaGTGTTTGCCTCCCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KRLLMSAGTTHVTAARVIGFLLL*CLPPIS Trigger: AGAGATGGGAGGCAAACAGCAGAGGAGGAGGAACCC...GATGACCCTGGCTGCTGTCACATGAGTTGTGCCTGCCGACATAAGAAGCCTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086002.11 ENSMUST00000187313.7 |
||
| CDS-3UTR GCA 90 bp | GGCACAACTCATGTGACAGCAGCCAGGGTCATCACCAGAGCTGAGCACAGGGCCGCCATCTTGTCTTTCTaGAGTGCATTGTATACGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GTTHVTAARVITRAEHRAAILSF*SALYTP Trigger: AGGCGTATACAATGCACTGCAGAAAGACAAGATGGC...GGCCCTGTGCTCAGCTCTGGTGATGACCCTGGCTGCTGTCACATGAGTTGTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086002.11 ENSMUST00000187313.7 |
||
| CDS-3UTR GCA 90 bp | GAGGCTAAGAGGCTTCTTATGTCGGCAGGCACAACTCATGTGACAGCAGCCAGGCTTCTGTTCCCGAACTaGACTGCTTGGAAGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EAKRLLMSAGTTHVTAARLLFPN*TAWKWL Trigger: CAGCCACTTCCAAGCAGTGCAGTTCGGGAACAGAAG...CCTGGCTGCTGTCACATGAGTTGTGCCTGCCGACATAAGAAGCCTCTTAGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086002.11 ENSMUST00000187313.7 |
||
| CDS-3UTR CCA 90 bp | AAGAGGCTTCTTATGTCGGCAGGCACAACTCATGTGACAGCAGCCAGGGTCATCCATTGTAGAGCTGGTTaGGGTCCTGCAGGTTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KRLLMSAGTTHVTAARVIHCRAG*GPAGWQ Trigger: CTGCCAACCTGCAGGACCCCAACCAGCTCTACAATG...GATGACCCTGGCTGCTGTCACATGAGTTGTGCCTGCCGACATAAGAAGCCTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086002.11 ENSMUST00000187313.7 |
||
| CDS-3UTR CCA 90 bp | GAGGCTAAGAGGCTTCTTATGTCGGCAGGCACAACTCATGTGACAGCAGCCAGGGATTGGCTACTCTGCTaGGTGCTTTCACCTTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: EAKRLLMSAGTTHVTAARDWLLC*VLSPLG Trigger: CCCCAAAGGTGAAAGCACCCAGCAGAGTAGCCAATC...CCTGGCTGCTGTCACATGAGTTGTGCCTGCCGACATAAGAAGCCTCTTAGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086002.11 ENSMUST00000187313.7 |
||
| CDS-3UTR CCA 90 bp | AACACTGAGGTTGGAAAGCTTCGTCTCGTCTCTGTTCTCCCCATCGGCCTCACCTTGTATACGCCTTCCTaGGGGTTCCTCCTCCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NTEVGKLRLVSVLPIGLTLYTPS*GFLLLC Trigger: ACAGAGGAGGAGGAACCCCCAGGAAGGCGTATACAA...GGTGAGGCCGATGGGGAGAACAGAGACGAGACGAAGCTTTCCAACCTCAGTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161559.3 |
||
| 3UTR CAA 72 bp | TTGAGCCACCTCTGGCTGGCATTTACCTGGACTCCCTaGTACCTGCCTCTCTGCCTTTCACAATGTGGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: LSHLWLAFTWTP*YLPLCLSQCGL Trigger: TAGGCCACATTGTGAAAGGCAGAGAGGCAGGTACAAGGGAGTCCAGGTAAATGCCAGCCAGAGGTGGCTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
||
| CDS-3UTR GCA 90 bp | CAAAGAAAAGGGAAGTCTTCGGCCCCAATGCAGTCTGTGGCGTCCTGGCACTTGGTTGGCAGCAGTCTCTaGACTCCTGCTGAATTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QRKGKSSAPMQSVASWHLVGSSL*TPAEFC Trigger: GCAAAATTCAGCAGGAGTGCAGAGACTGCTGCCAAC...CAAGTGCCAGGACGCCACAGACTGCATTGGGGCCGAAGACTTCCCTTTTCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027849.11 |
||
| CDS-3UTR GCA 90 bp | GTGTTAGGATACGGCTGCTGGGAGGCTAAGAGGCTTCTTATGTCGGCAGGCACAGTTGGCAGCAGTCTCTaGACTCCTGCTGAATTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VLGYGCWEAKRLLMSAGTVGSSL*TPAEFC Trigger: GCAAAATTCAGCAGGAGTGCAGAGACTGCTGCCAAC...TGTGCCTGCCGACATAAGAAGCCTCTTAGCCTCCCAGCAGCCGTATCCTAACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086002.11 ENSMUST00000187313.7 |
||
| CDS-3UTR GCA 90 bp | AGTATGCAGAACCATGCAGGTGATGTGTGGGGTGTCCAGTGGGTTCAGGATGCCGTTGGCAGCAGTCTCTaGACTCCTGCTGAATTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SMQNHAGDVWGVQWVQDAVGSSL*TPAEFC Trigger: GCAAAATTCAGCAGGAGTGCAGAGACTGCTGCCAAC...GGCATCCTGAACCCACTGGACACCCCACACATCACCTGCATGGTTCTGCATACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| CDS-3UTR CCA 90 bp | GATACGGCTGCTGGGAGGCTAAGAGGCTTCTTATGTCGGCAGGCACAACTCATGGCAAGTAGCAGAGTTTaGGATCCAGCAGACCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: DTAAGRLRGFLCRQAQLMASSRV*DPADQS Trigger: GCTTTGGTCTGCTGGATCCCAAACTCTGCTACTTGC...CATGAGTTGTGCCTGCCGACATAAGAAGCCTCTTAGCCTCCCAGCAGCCGTATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086002.11 ENSMUST00000187313.7 |
||
| CDS-3UTR CCA 90 bp | AGTATGCAGAACCATGCAGGTGATGTGTGGGGTGTCCAGTGGGTTCAGGATGCCGCAAGTAGCAGAGTTTaGGATCCAGCAGACCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SMQNHAGDVWGVQWVQDAASSRV*DPADQS Trigger: GCTTTGGTCTGCTGGATCCCAAACTCTGCTACTTGC...GGCATCCTGAACCCACTGGACACCCCACACATCACCTGCATGGTTCTGCATACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR CAA 72 bp | TACTGTTCCCCTGTGGCTAGGAACCTTCCTTGTGTGTaGCTTCCCTTCTTTGAGCCACCTCTGGCTGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: YCSPVARNLPCV*LPFFEPPLAGI Trigger: AATGCCAGCCAGAGGTGGCTCAAAGAAGGGAAGCAACACACAAGGAAGGTTCCTAGCCACAGGGGAACAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
||
| CDS-3UTR TCA 90 bp | CCTTCTTTGAGCCACCTCTGGCTGGCATTTACCTGGACTCCCTTGTACCTGCCTTCTCTGCACTCCTGCTaGATTTTGCTCTCAGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: PSLSHLWLAFTWTPLYLPSLHSC*ILLSGT Trigger: TGTACCTGAGAGCAAAATTCAGCAGGAGTGCAGAGA...AGGCAGGTACAAGGGAGTCCAGGTAAATGCCAGCCAGAGGTGGCTCAAAGAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
||
| CDS-3UTR TCA 90 bp | TACGGCTGCTGGGAGGCTAAGAGGCTTCTTATGTCGGCAGGCACAACTCATGTGTCTCTGCACTCCTGCTaGATTTTGCTCTCAGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: YGCWEAKRLLMSAGTTHVSLHSC*ILLSGT Trigger: TGTACCTGAGAGCAAAATTCAGCAGGAGTGCAGAGA...CACATGAGTTGTGCCTGCCGACATAAGAAGCCTCTTAGCCTCCCAGCAGCCGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086002.11 ENSMUST00000187313.7 |
||
| CDS-3UTR TCA 90 bp | TACGGCTGCTGGGAGGCTAAGAGGCTTCTTATGTCGGCAGGCACAACTCATGTGGGTCCTTGTGAGTTCTaGACCTTCTCTCTCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YGCWEAKRLLMSAGTTHVGPCEF*TFSLSS Trigger: AGAAGAGAGAGAGAAGGTTCAGAACTCACAAGGACC...CACATGAGTTGTGCCTGCCGACATAAGAAGCCTCTTAGCCTCCCAGCAGCCGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086002.11 ENSMUST00000187313.7 |
||
| CDS-3UTR GCA 90 bp | ATGCAGCACAGTATGCAGAACCATGCAGGTGATGTGTGGGGTGTCCAGTGGGTTGTTGGCAGCAGTCTCTaGACTCCTGCTGAATTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: MQHSMQNHAGDVWGVQWVVGSSL*TPAEFC Trigger: GCAAAATTCAGCAGGAGTGCAGAGACTGCTGCCAAC...AACCCACTGGACACCCCACACATCACCTGCATGGTTCTGCATACTGTGCTGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| CDS-3UTR GCA 90 bp | TTTTTCAAAAGTCCCATCCTCACCACAACTCATGTGACAGCAGCCAGGGTCATCAGCTGGTTGGGGTCCTaGAGGTTGGCAGCAGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FFKSPILTTTHVTAARVISWLGS*RLAAVS Trigger: AGAGACTGCTGCCAACCTGCAGGACCCCAACCAGCT...GATGACCCTGGCTGCTGTCACATGAGTTGTGGTGAGGATGGGACTTTTGAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027849.11 |
||
| CDS-3UTR GCA 90 bp | CTTTGGGAAGAGATTGGTTTTGTTCCTCCCTGCTGCTCGGTTGAGATTGGTAGAAGCTGGTTGGGGTCCTaGAGGTTGGCAGCAGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LWEEIGFVPPCCSVEIGRSWLGS*RLAAVS Trigger: AGAGACTGCTGCCAACCTGCAGGACCCCAACCAGCT...TCTACCAATCTCAACCGAGCAGCAGGGAGGAACAAAACCAATCTCTTCCCAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| CDS-3UTR GCA 90 bp | AAGTGTAAGGTTCTAGCAGGGTGGTCAGGAAACCTCTTCCTCAGCATTCGTCCATCCTCCTCTGCTGTTTaGCTCCCATCTCTGGATCCC | + |
|
Preference number: 4 (lower is better) Translates to: KCKVLAGWSGNLFLSIRPSSSAV*LPSLDP Trigger: GGGATCCAGAGATGGGAGGCAAACAGCAGAGGAGGA...TGGACGAATGCTGAGGAAGAGGTTTCCTGACCACCCTGCTAGAACCTTACACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| CDS-3UTR CCA 90 bp | CCCATAGAACAATACACACAGTACCTAGGGCTTCTCTGGGGACTTTACAAAGCACCTGGGAACCGCACGTaGAGGATGCAGGCGAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: PIEQYTQYLGLLWGLYKAPGNRT*RMQART Trigger: TGTTCTCGCCTGCATCCTCCACGTGCGGTTCCCAGG...TGCTTTGTAAAGTCCCCAGAGAAGCCCTAGGTACTGTGTGTATTGTTCTATGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
||
| CDS-3UTR CCA 90 bp | AAGAGCAGACTACAGCCGAATGACATCTCCTTCCTCTCCTGTAGAGCTGTTTTTCTGTGCCTCTGCTCCTaGGAACCGCACGTGGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: KSRLQPNDISFLSCRAVFLCLCS*EPHVED Trigger: ATCCTCCACGTGCGGTTCCCAGGAGCAGAGGCACAG...AAAAACAGCTCTACAGGAGAGGAAGGAGATGTCATTCGGCTGTAGTCTGCTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000161559.3 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| CDS-3UTR CCA 90 bp | ATGCAGCACAGTATGCAGAACCATGCAGGTGATGTGTGGGGTGTCCAGTGGGTTGCAAGTAGCAGAGTTTaGGATCCAGCAGACCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: MQHSMQNHAGDVWGVQWVASSRV*DPADQS Trigger: GCTTTGGTCTGCTGGATCCCAAACTCTGCTACTTGC...AACCCACTGGACACCCCACACATCACCTGCATGGTTCTGCATACTGTGCTGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| CDS-3UTR CCA 90 bp | AAGTGTAAGGTTCTAGCAGGGTGGTCAGGAAACCTCTTCCTCAGCATTCGTCCACATTGTAGAGCTGGTTaGGGTCCTGCAGGTTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KCKVLAGWSGNLFLSIRPHCRAG*GPAGWQ Trigger: CTGCCAACCTGCAGGACCCCAACCAGCTCTACAATG...TGGACGAATGCTGAGGAAGAGGTTTCCTGACCACCCTGCTAGAACCTTACACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| CDS-3UTR GCA 90 bp | GTGACAACAGAAGCCAAATTTACAGCAGGAGCGGAGCGAGTCAATACCCATAGAACCGCACGTGGAGGATaGAGGCGAGAACAGACACTT | + |
|
Preference number: 4 (lower is better) Translates to: VTTEAKFTAGAERVNTHRTARGG*RREQTL Trigger: AAGTGTCTGTTCTCGCCTGCATCCTCCACGTGCGGT...TCTATGGGTATTGACTCGCTCCGCTCCTGCTGTAAATTTGGCTTCTGTTGTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
||
| CDS-3UTR GCA 90 bp | AGATTGGTTTTGTTCCTCCCTGCTGCTCGGTTGAGATTGGTAGAGTTTGCTCAGACCGCACGTGGAGGATaGAGGCGAGAACAGACACTT | + |
|
Preference number: 4 (lower is better) Translates to: RLVLFLPAARLRLVEFAQTARGG*RREQTL Trigger: AAGTGTCTGTTCTCGCCTGCATCCTCCACGTGCGGT...CTGAGCAAACTCTACCAATCTCAACCGAGCAGCAGGGAGGAACAAAACCAATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| CDS-3UTR GCA 90 bp | CTTCTGCTCTTGGCCTTTGCTGGAAGCAGTAAACTTGAGTATATCACGTGTCGAAAAGCTCTGTGCCTCTaGTCCTGGGAACCGCACGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLLLAFAGSSKLEYITCRKALCL*SWEPHV Trigger: CACGTGCGGTTCCCAGGAGCAGAGGCACAGAGCTTT...TCGACACGTGATATACTCAAGTTTACTGCTTCCAGCAAAGGCCAAGAGCAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| CDS-3UTR GCA 90 bp | ATCAGATTTTTCAAAAGTCCCATCCTCACCACAACTCATGTGACAGCAGCCAGGCAGACCAAAGCTCTGTaGCTCTGCTCCTGGGAACCG | + |
|
Preference number: 4 (lower is better) Translates to: IRFFKSPILTTTHVTAARQTKAL*LCSWEP Trigger: CGGTTCCCAGGAGCAGAGGCACAGAGCTTTGGTCTG...CCTGGCTGCTGTCACATGAGTTGTGGTGAGGATGGGACTTTTGAAAAATCTGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027849.11 |
||
| CDS-3UTR GCA 90 bp | AAGAGGCTTCTTATGTCGGCAGGCACAACTCATGTGACAGCAGCCAGGGTCATCACTCCTGCTGAATTTTaGTCTCAGGTACAGGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KRLLMSAGTTHVTAARVITPAEF*SQVQGC Trigger: ACAGCCCTGTACCTGAGAGCAAAATTCAGCAGGAGT...GATGACCCTGGCTGCTGTCACATGAGTTGTGCCTGCCGACATAAGAAGCCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086002.11 ENSMUST00000187313.7 |
||
| CDS-3UTR GCA 90 bp | ATGCTGTATGTATTTGGGGTCCTGTTTATAGAGTTAGGGAGGGTTGGGTTGGGAAGCTGGTTGGGGTCCTaGAGGTTGGCAGCAGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: MLYVFGVLFIELGRVGLGSWLGS*RLAAVS Trigger: AGAGACTGCTGCCAACCTGCAGGACCCCAACCAGCT...TCCCAACCCAACCCTCCCTAACTCTATAAACAGGACCCCAAATACATACAGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| CDS-3UTR GCA 90 bp | GGCTGCTGGGAGGCTAAGAGGCTTCTTATGTCGGCAGGCACAACTCATGTGACACTTGTCTTTCTGCAGTaGATTGTATACGCCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GCWEAKRLLMSAGTTHVTLVFLQ*IVYAFL Trigger: CAGGAAGGCGTATACAATGCACTGCAGAAAGACAAG...TGTCACATGAGTTGTGCCTGCCGACATAAGAAGCCTCTTAGCCTCCCAGCAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086002.11 ENSMUST00000187313.7 |
||
| CDS-3UTR GCA 90 bp | GAGCAAACACTGAGGTTGGAAAGCTTCGTCTCGTCTCTGTTCTCCCCATCGGCCCTTGTCTTTCTGCAGTaGATTGTATACGCCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: EQTLRLESFVSSLFSPSALVFLQ*IVYAFL Trigger: CAGGAAGGCGTATACAATGCACTGCAGAAAGACAAG...GGCCGATGGGGAGAACAGAGACGAGACGAAGCTTTCCAACCTCAGTGTTTGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| CDS-3UTR GCA 90 bp | GATACGGCTGCTGGGAGGCTAAGAGGCTTCTTATGTCGGCAGGCACAACTCATGCTTGTCTTTCTGCAGTaGATTGTATACGCCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: DTAAGRLRGFLCRQAQLMLVFLQ*IVYAFL Trigger: CAGGAAGGCGTATACAATGCACTGCAGAAAGACAAG...CATGAGTTGTGCCTGCCGACATAAGAAGCCTCTTAGCCTCCCAGCAGCCGTATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086002.11 ENSMUST00000187313.7 |
||
| CDS-3UTR GCA 90 bp | AGTATGCAGAACCATGCAGGTGATGTGTGGGGTGTCCAGTGGGTTCAGGATGCCGCCATCTTGTCTTTCTaGAGTGCATTGTATACGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SMQNHAGDVWGVQWVQDAAILSF*SALYTP Trigger: AGGCGTATACAATGCACTGCAGAAAGACAAGATGGC...GGCATCCTGAACCCACTGGACACCCCACACATCACCTGCATGGTTCTGCATACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| CDS-3UTR GCA 90 bp | GTTCATACCCGGTGTATGGTAGGATTTGTGAACTGGGTTTCTTCCAACCATCATGGCTACTCTGCTGGGTaGTTTCACCTTTGGGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: VHTRCMVGFVNWVSSNHHGYSAG*FHLWGG Trigger: CCCGCCCCAAAGGTGAAAGCACCCAGCAGAGTAGCC...ATGATGGTTGGAAGAAACCCAGTTCACAAATCCTACCATACACCGGGTATGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187313.7 |
||
| CDS-3UTR CCA 90 bp | CAAGTTTTCCAGACACTCAAAGGCCATAGAGCAAACACTGAGGTTGGAAAGCTTCCTGGGAACCGCACGTaGAGGATGCAGGCGAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: QVFQTLKGHRANTEVGKLPGNRT*RMQART Trigger: TGTTCTCGCCTGCATCCTCCACGTGCGGTTCCCAGG...AAGCTTTCCAACCTCAGTGTTTGCTCTATGGCCTTTGAGTGTCTGGAAAACTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| CDS-3UTR CCA 90 bp | CAAGTTTTCCAGACACTCAAAGGCCATAGAGCAAACACTGAGGTTGGAAAGCTTCTGTGCCTCTGCTCCTaGGAACCGCACGTGGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: QVFQTLKGHRANTEVGKLLCLCS*EPHVED Trigger: ATCCTCCACGTGCGGTTCCCAGGAGCAGAGGCACAG...AAGCTTTCCAACCTCAGTGTTTGCTCTATGGCCTTTGAGTGTCTGGAAAACTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| CDS-3UTR CCA 90 bp | CTTAGGCAAAGGAAGAGTGTGCACGTGTCCAGGTGTGCAGATGAAAAGACAGATCATTGTAGAGCTGGTTaGGGTCCTGCAGGTTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LRQRKSVHVSRCADEKTDHCRAG*GPAGWQ Trigger: CTGCCAACCTGCAGGACCCCAACCAGCTCTACAATG...ATCTGTCTTTTCATCTGCACACCTGGACACGTGCACACTCTTCCTTTGCCTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR CAA 72 bp | GCAGGACTTGCTCCCTTTTCTCTTGCTCCCTTGTCGTaGGCGGTAATGGCCCATCCTATTTTCTGTGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: AGLAPFSLAPLS*AVMAHPIFCVS Trigger: ACTGACACAGAAAATAGGATGGGCCATTACCGCCAACGACAAGGGAGCAAGAGAAAAGGGAGCAAGTCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
||
| 3UTR CAA 72 bp | CGAATGACATCTCCTTCCTCTCCTGTAGAGCTGTTTTaGCTGCACAGTGTGTTAGGATACGGCTGCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RMTSPSSPVELF*LHSVLGYGCWE Trigger: CTCCCAGCAGCCGTATCCTAACACACTGTGCAGCAAAAACAGCTCTACAGGAGAGGAAGGAGATGTCATTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187313.7 |
||
| CDS-3UTR GCA 90 bp | CAAGTTTTCCAGACACTCAAAGGCCATAGAGCAAACACTGAGGTTGGAAAGCTTCAGACCAAAGCTCTGTaGCTCTGCTCCTGGGAACCG | + |
|
Preference number: 4 (lower is better) Translates to: QVFQTLKGHRANTEVGKLQTKAL*LCSWEP Trigger: CGGTTCCCAGGAGCAGAGGCACAGAGCTTTGGTCTG...AAGCTTTCCAACCTCAGTGTTTGCTCTATGGCCTTTGAGTGTCTGGAAAACTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| CDS-3UTR GCA 90 bp | CTTCTGCTCTTGGCCTTTGCTGGAAGCAGTAAACTTGAGTATATCACGTGTCGAGGGTTCCTCCTCCTCTaGTGTTTGCCTCCCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLLLAFAGSSKLEYITCRGFLLL*CLPPIS Trigger: AGAGATGGGAGGCAAACAGCAGAGGAGGAGGAACCC...TCGACACGTGATATACTCAAGTTTACTGCTTCCAGCAAAGGCCAAGAGCAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| CDS-3UTR GCA 90 bp | AGATTGGTTTTGTTCCTCCCTGCTGCTCGGTTGAGATTGGTAGAGTTTGCTCAGCTTCTGTTCCCGAACTaGACTGCTTGGAAGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RLVLFLPAARLRLVEFAQLLFPN*TAWKWL Trigger: CAGCCACTTCCAAGCAGTGCAGTTCGGGAACAGAAG...CTGAGCAAACTCTACCAATCTCAACCGAGCAGCAGGGAGGAACAAAACCAATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161559.3 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| CDS-3UTR CCA 90 bp | AATACCCATAGAACAATACACACAGTACCTAGGGCTTCTCTGGGGACTTTACAACTGTGCCTCTGCTCCTaGGAACCGCACGTGGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: NTHRTIHTVPRASLGTLQLCLCS*EPHVED Trigger: ATCCTCCACGTGCGGTTCCCAGGAGCAGAGGCACAG...TTGTAAAGTCCCCAGAGAAGCCCTAGGTACTGTGTGTATTGTTCTATGGGTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
||
| CDS-3UTR CCA 90 bp | ATGCTGTATGTATTTGGGGTCCTGTTTATAGAGTTAGGGAGGGTTGGGTTGGGAACGCTGGCACAGGATTaGCTACTCTGCTGGGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: MLYVFGVLFIELGRVGLGTLAQD*LLCWVL Trigger: AAGCACCCAGCAGAGTAGCCAATCCTGTGCCAGCGT...TCCCAACCCAACCCTCCCTAACTCTATAAACAGGACCCCAAATACATACAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187313.7 |
||
| 3UTR CAA 72 bp | AAGAAGGCAGGACTTGCTCCCTTTTCTCTTGCTCCCTaGTCGTTGGCGGTAATGGCCCATCCTATTTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KKAGLAPFSLAP*SLAVMAHPIFC Trigger: ACAGAAAATAGGATGGGCCATTACCGCCAACGACAAGGGAGCAAGAGAAAAGGGAGCAAGTCCTGCCTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
||
| CDS-3UTR GCA 90 bp | GTTCATACCCGGTGTATGGTAGGATTTGTGAACTGGGTTTCTTCCAACCATCATACCGCACGTGGAGGATaGAGGCGAGAACAGACACTT | + |
|
Preference number: 4 (lower is better) Translates to: VHTRCMVGFVNWVSSNHHTARGG*RREQTL Trigger: AAGTGTCTGTTCTCGCCTGCATCCTCCACGTGCGGT...ATGATGGTTGGAAGAAACCCAGTTCACAAATCCTACCATACACCGGGTATGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| CDS-3UTR GCA 90 bp | GCCAAGAAGTTGAAAGCTAACACAAGTCAAAAGCTAACCCTACCCTGTACTAAGAAAGCTCTGTGCCTCTaGTCCTGGGAACCGCACGTG | + |
|
Preference number: 4 (lower is better) Translates to: AKKLKANTSQKLTLPCTKKALCL*SWEPHV Trigger: CACGTGCGGTTCCCAGGAGCAGAGGCACAGAGCTTT...CTTAGTACAGGGTAGGGTTAGCTTTTGACTTGTGTTAGCTTTCAACTTCTTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| CDS-3UTR GCA 90 bp | CATAGAGCAAACACTGAGGTTGGAAAGCTTCGTCTCGTCTCTGTTCTCCCCATCACTCCTGCTGAATTTTaGTCTCAGGTACAGGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HRANTEVGKLRLVSVLPITPAEF*SQVQGC Trigger: ACAGCCCTGTACCTGAGAGCAAAATTCAGCAGGAGT...GATGGGGAGAACAGAGACGAGACGAAGCTTTCCAACCTCAGTGTTTGCTCTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| CDS-3UTR GCA 90 bp | AGGGCTTCTCTGGGGACTTTACAAAGCAAACTGAACTCAGCTAGCTGCAGGAGGCTTGTCTTTCTGCAGTaGATTGTATACGCCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RASLGTLQSKLNSASCRRLVFLQ*IVYAFL Trigger: CAGGAAGGCGTATACAATGCACTGCAGAAAGACAAG...CCTCCTGCAGCTAGCTGAGTTCAGTTTGCTTTGTAAAGTCCCCAGAGAAGCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
||
| CDS-3UTR CCA 90 bp | AGGCAAGTCTTTTCTAAGTTGAGAGATTCATTCAGATGCATGCCCAGGAGTTTTCCTGGGAACCGCACGTaGAGGATGCAGGCGAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: RQVFSKLRDSFRCMPRSFPGNRT*RMQART Trigger: TGTTCTCGCCTGCATCCTCCACGTGCGGTTCCCAGG...AAAACTCCTGGGCATGCATCTGAATGAATCTCTCAACTTAGAAAAGACTTGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027849.11 |
||
| CDS-3UTR CCA 90 bp | TCAATACCCATAGAACAATACACACAGTACCTAGGGCTTCTCTGGGGACTTTACTTGTATACGCCTTCCTaGGGGTTCCTCCTCCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SIPIEQYTQYLGLLWGLYLYTPS*GFLLLC Trigger: GCAGAGGAGGAGGAACCCCCAGGAAGGCGTATACAA...GTAAAGTCCCCAGAGAAGCCCTAGGTACTGTGTGTATTGTTCTATGGGTATTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
||
| CDS-3UTR CCA 90 bp | TTATTATTTGACAATCTTATATCCGACGGGCTTTCTGGAAGCTGCTTCTCCGGCTTGTATACGCCTTCCTaGGGGTTCCTCCTCCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLFDNLISDGLSGSCFSGLYTPS*GFLLLC Trigger: GCAGAGGAGGAGGAACCCCCAGGAAGGCGTATACAA...GCCGGAGAAGCAGCTTCCAGAAAGCCCGTCGGATATAAGATTGTCAAATAATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027849.11 |
||
| CDS-3UTR CCA 90 bp | TTATTATTTGACAATCTTATATCCGACGGGCTTTCTGGAAGCTGCTTCTCCGGCACGCTGGCACAGGATTaGCTACTCTGCTGGGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLFDNLISDGLSGSCFSGTLAQD*LLCWVL Trigger: AAGCACCCAGCAGAGTAGCCAATCCTGTGCCAGCGT...GCCGGAGAAGCAGCTTCCAGAAAGCCCGTCGGATATAAGATTGTCAAATAATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027849.11 |
||
| 3UTR CAA 72 bp | TGGCCAGCTCAGAGGGGCAGGCAAGTCTTTTCTAAGTaGAGAGATTCATTCAGATGCATGCCCAGGAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: WPAQRGRQVFSK*RDSFRCMPRSF Trigger: AAAACTCCTGGGCATGCATCTGAATGAATCTCTCAACTTAGAAAAGACTTGCCTGCCCCTCTGAGCTGGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027849.11 |
||
| CDS-3UTR TCA 90 bp | AGATTGGTTTTGTTCCTCCCTGCTGCTCGGTTGAGATTGGTAGAGTTTGCTCAGTCTCTGCACTCCTGCTaGATTTTGCTCTCAGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: RLVLFLPAARLRLVEFAQSLHSC*ILLSGT Trigger: TGTACCTGAGAGCAAAATTCAGCAGGAGTGCAGAGA...CTGAGCAAACTCTACCAATCTCAACCGAGCAGCAGGGAGGAACAAAACCAATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| CDS-3UTR TCA 90 bp | CTTTGGGAAGAGATTGGTTTTGTTCCTCCCTGCTGCTCGGTTGAGATTGGTAGAGGTCCTTGTGAGTTCTaGACCTTCTCTCTCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LWEEIGFVPPCCSVEIGRGPCEF*TFSLSS Trigger: AGAAGAGAGAGAGAAGGTTCAGAACTCACAAGGACC...TCTACCAATCTCAACCGAGCAGCAGGGAGGAACAAAACCAATCTCTTCCCAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161559.3 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| CDS-3UTR GCA 90 bp | AGGCAAGTCTTTTCTAAGTTGAGAGATTCATTCAGATGCATGCCCAGGAGTTTTAAAGCTCTGTGCCTCTaGTCCTGGGAACCGCACGTG | + |
|
Preference number: 4 (lower is better) Translates to: RQVFSKLRDSFRCMPRSFKALCL*SWEPHV Trigger: CACGTGCGGTTCCCAGGAGCAGAGGCACAGAGCTTT...AAAACTCCTGGGCATGCATCTGAATGAATCTCTCAACTTAGAAAAGACTTGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027849.11 |
||
| CDS-3UTR GCA 90 bp | CATAGAGCAAACACTGAGGTTGGAAAGCTTCGTCTCGTCTCTGTTCTCCCCATCCTTGTCTTTCTGCAGTaGATTGTATACGCCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HRANTEVGKLRLVSVLPILVFLQ*IVYAFL Trigger: CAGGAAGGCGTATACAATGCACTGCAGAAAGACAAG...GATGGGGAGAACAGAGACGAGACGAAGCTTTCCAACCTCAGTGTTTGCTCTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| CDS-3UTR CCA 90 bp | AATGAGTCATCTTTTGTCATGTTAGTGATTGCTGTGCTAGTAGTAGCCCAACATCCTGGGAACCGCACGTaGAGGATGCAGGCGAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: NESSFVMLVIAVLVVAQHPGNRT*RMQART Trigger: TGTTCTCGCCTGCATCCTCCACGTGCGGTTCCCAGG...ATGTTGGGCTACTACTAGCACAGCAATCACTAACATGACAAAAGATGACTCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| CDS-3UTR CCA 90 bp | AAACTTGAGTATATCACGTGTCGATTCAGTGATCTGGATCTCTCTGTCTCTTTTCTGTGCCTCTGCTCCTaGGAACCGCACGTGGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: KLEYITCRFSDLDLSVSFLCLCS*EPHVED Trigger: ATCCTCCACGTGCGGTTCCCAGGAGCAGAGGCACAG...AAAAGAGACAGAGAGATCCAGATCACTGAATCGACACGTGATATACTCAAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| CDS-3UTR CCA 90 bp | TTACAGCAGGAGCGGAGCGAGTCAATACCCATAGAACAATACACACAGTACCTAGCAAGTAGCAGAGTTTaGGATCCAGCAGACCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LQQERSESIPIEQYTQYLASSRV*DPADQS Trigger: GCTTTGGTCTGCTGGATCCCAAACTCTGCTACTTGC...TAGGTACTGTGTGTATTGTTCTATGGGTATTGACTCGCTCCGCTCCTGCTGTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
||
| CDS-3UTR CCA 90 bp | ATGCTGTATGTATTTGGGGTCCTGTTTATAGAGTTAGGGAGGGTTGGGTTGGGAGCAAGTAGCAGAGTTTaGGATCCAGCAGACCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: MLYVFGVLFIELGRVGLGASSRV*DPADQS Trigger: GCTTTGGTCTGCTGGATCCCAAACTCTGCTACTTGC...TCCCAACCCAACCCTCCCTAACTCTATAAACAGGACCCCAAATACATACAGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| CDS-3UTR CCA 90 bp | TTGGAACATCAGATTTTTCAAAAGTCCCATCCTCACCACAACTCATGTGACAGCCATTGTAGAGCTGGTTaGGGTCCTGCAGGTTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LEHQIFQKSHPHHNSCDSHCRAG*GPAGWQ Trigger: CTGCCAACCTGCAGGACCCCAACCAGCTCTACAATG...GCTGTCACATGAGTTGTGGTGAGGATGGGACTTTTGAAAAATCTGATGTTCCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027849.11 |
||
| CDS-3UTR CCA 90 bp | GCCAAGAAGTTGAAAGCTAACACAAGTCAAAAGCTAACCCTACCCTGTACTAAGCATTGTAGAGCTGGTTaGGGTCCTGCAGGTTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AKKLKANTSQKLTLPCTKHCRAG*GPAGWQ Trigger: CTGCCAACCTGCAGGACCCCAACCAGCTCTACAATG...CTTAGTACAGGGTAGGGTTAGCTTTTGACTTGTGTTAGCTTTCAACTTCTTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| CDS-3UTR CCA 90 bp | GCCAAGAAGTTGAAAGCTAACACAAGTCAAAAGCTAACCCTACCCTGTACTAAGTTGTATACGCCTTCCTaGGGGTTCCTCCTCCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: AKKLKANTSQKLTLPCTKLYTPS*GFLLLC Trigger: GCAGAGGAGGAGGAACCCCCAGGAAGGCGTATACAA...CTTAGTACAGGGTAGGGTTAGCTTTTGACTTGTGTTAGCTTTCAACTTCTTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| CDS-3UTR GCA 90 bp | CCAAATTTACAGCAGGAGCGGAGCGAGTCAATACCCATAGAACAATACACACAGACTCCTGCTGAATTTTaGTCTCAGGTACAGGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PNLQQERSESIPIEQYTQTPAEF*SQVQGC Trigger: ACAGCCCTGTACCTGAGAGCAAAATTCAGCAGGAGT...CTGTGTGTATTGTTCTATGGGTATTGACTCGCTCCGCTCCTGCTGTAAATTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
||
| CDS-3UTR GCA 90 bp | AAGAGCAGACTACAGCCGAATGACATCTCCTTCCTCTCCTGTAGAGCTGTTTTTACTCCTGCTGAATTTTaGTCTCAGGTACAGGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KSRLQPNDISFLSCRAVFTPAEF*SQVQGC Trigger: ACAGCCCTGTACCTGAGAGCAAAATTCAGCAGGAGT...AAAAACAGCTCTACAGGAGAGGAAGGAGATGTCATTCGGCTGTAGTCTGCTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000161559.3 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| CDS-3UTR GCA 90 bp | TACCCGGTGTATGGTAGGATTTGTGAACTGGGTTTCTTCCAACCATCATTCTCTGTTGGCAGCAGTCTCTaGACTCCTGCTGAATTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: YPVYGRICELGFFQPSFSVGSSL*TPAEFC Trigger: GCAAAATTCAGCAGGAGTGCAGAGACTGCTGCCAAC...AGAGAATGATGGTTGGAAGAAACCCAGTTCACAAATCCTACCATACACCGGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| CDS-3UTR GCA 90 bp | TTTGCTCAGCATAACACTGATACTCTGACTGAGAAAGAAACTTGGAGTGCAAAAAGCTGGTTGGGGTCCTaGAGGTTGGCAGCAGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FAQHNTDTLTEKETWSAKSWLGS*RLAAVS Trigger: AGAGACTGCTGCCAACCTGCAGGACCCCAACCAGCT...TTTTGCACTCCAAGTTTCTTTCTCAGTCAGAGTATCAGTGTTATGCTGAGCAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| CDS-3UTR GCA 90 bp | AAGAAATTGGAACATCAGATTTTTCAAAAGTCCCATCCTCACCACAACTCATGTGGCTACTCTGCTGGGTaGTTTCACCTTTGGGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: KKLEHQIFQKSHPHHNSCGYSAG*FHLWGG Trigger: CCCGCCCCAAAGGTGAAAGCACCCAGCAGAGTAGCC...ACATGAGTTGTGGTGAGGATGGGACTTTTGAAAAATCTGATGTTCCAATTTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027849.11 |
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| CDS-3UTR GCA 90 bp | CATACAAATAAAACTAGGCCATCCAACCTGTTGGAGTACCAGTCAGGATTTAGTTCCTCCTCCTCTGTTTaGCTCCCATCTCTGGATCCC | + |
|
Preference number: 4 (lower is better) Translates to: HTNKTRPSNLLEYQSGFSSSSSV*LPSLDP Trigger: GGGATCCAGAGATGGGAGGCAAACAGAGGAGGAGGA...ACTAAATCCTGACTGGTACTCCAACAGGTTGGATGGCCTAGTTTTATTTGTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161559.3 |
||
| CDS-3UTR CCA 90 bp | TTCTGCTCTTGGCCTTTGCTGGAAGCAGTAAACTTGAGTATATCACGTGTCGATGCAAGTAGCAGAGTTTaGGATCCAGCAGACCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: FCSWPLLEAVNLSISRVDASSRV*DPADQS Trigger: GCTTTGGTCTGCTGGATCCCAAACTCTGCTACTTGC...ATCGACACGTGATATACTCAAGTTTACTGCTTCCAGCAAAGGCCAAGAGCAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| 3UTR CAA 72 bp | GGGAAGAGATTGGTTTTGTTCCTCCCTGCTGCTCGGTaGAGATTGGTAGAGTTTGCTCAGCATAACACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GKRLVLFLPAAR*RLVEFAQHNTD Trigger: ATCAGTGTTATGCTGAGCAAACTCTACCAATCTCAACCGAGCAGCAGGGAGGAACAAAACCAATCTCTTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| CDS-3UTR GCA 90 bp | TACCCGGTGTATGGTAGGATTTGTGAACTGGGTTTCTTCCAACCATCATTCTCTACTCCTGCTGAATTTTaGTCTCAGGTACAGGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: YPVYGRICELGFFQPSFSTPAEF*SQVQGC Trigger: ACAGCCCTGTACCTGAGAGCAAAATTCAGCAGGAGT...AGAGAATGATGGTTGGAAGAAACCCAGTTCACAAATCCTACCATACACCGGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| CDS-3UTR GCA 90 bp | TTTGCTCAGCATAACACTGATACTCTGACTGAGAAAGAAACTTGGAGTGCAAAATCCTCCTCTGCTGTTTaGCTCCCATCTCTGGATCCC | + |
|
Preference number: 4 (lower is better) Translates to: FAQHNTDTLTEKETWSAKSSSAV*LPSLDP Trigger: GGGATCCAGAGATGGGAGGCAAACAGCAGAGGAGGA...TTTTGCACTCCAAGTTTCTTTCTCAGTCAGAGTATCAGTGTTATGCTGAGCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| CDS-3UTR GCA 90 bp | GAGTGGGATTTGATTTTGATACCAAAGACAACTGCTAAACCATTGCTTCTCAAGTCCTCCTCTGCTGTTTaGCTCCCATCTCTGGATCCC | + |
|
Preference number: 4 (lower is better) Translates to: EWDLILIPKTTAKPLLLKSSSAV*LPSLDP Trigger: GGGATCCAGAGATGGGAGGCAAACAGCAGAGGAGGA...CTTGAGAAGCAATGGTTTAGCAGTTGTCTTTGGTATCAAAATCAAATCCCACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| CDS-3UTR GCA 90 bp | CCAAATTTACAGCAGGAGCGGAGCGAGTCAATACCCATAGAACAATACACACAGGCCATCTTGTCTTTCTaGAGTGCATTGTATACGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PNLQQERSESIPIEQYTQAILSF*SALYTP Trigger: AGGCGTATACAATGCACTGCAGAAAGACAAGATGGC...CTGTGTGTATTGTTCTATGGGTATTGACTCGCTCCGCTCCTGCTGTAAATTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
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| CDS-3UTR GCA 90 bp | ATGCTGTATGTATTTGGGGTCCTGTTTATAGAGTTAGGGAGGGTTGGGTTGGGAGCCATCTTGTCTTTCTaGAGTGCATTGTATACGCCT | + |
|
Preference number: 4 (lower is better) Translates to: MLYVFGVLFIELGRVGLGAILSF*SALYTP Trigger: AGGCGTATACAATGCACTGCAGAAAGACAAGATGGC...TCCCAACCCAACCCTCCCTAACTCTATAAACAGGACCCCAAATACATACAGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| CDS-3UTR GCA 90 bp | GAAGATGTCTTTTTGGTTACTCTAGCTTTGGGAAGAGATTGGTTTTGTTCCTCCCTTCTGTTCCCGAACTaGACTGCTTGGAAGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EDVFLVTLALGRDWFCSSLLFPN*TAWKWL Trigger: CAGCCACTTCCAAGCAGTGCAGTTCGGGAACAGAAG...GGAGGAACAAAACCAATCTCTTCCCAAAGCTAGAGTAACCAAAAAGACATCTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000161559.3 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| CDS-3UTR GCA 90 bp | CATACAAATAAAACTAGGCCATCCAACCTGTTGGAGTACCAGTCAGGATTTAGTCTTCTGTTCCCGAACTaGACTGCTTGGAAGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HTNKTRPSNLLEYQSGFSLLFPN*TAWKWL Trigger: CAGCCACTTCCAAGCAGTGCAGTTCGGGAACAGAAG...ACTAAATCCTGACTGGTACTCCAACAGGTTGGATGGCCTAGTTTTATTTGTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161559.3 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| CDS-3UTR CCA 90 bp | TTGGAACATCAGATTTTTCAAAAGTCCCATCCTCACCACAACTCATGTGACAGCGCAAGTAGCAGAGTTTaGGATCCAGCAGACCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LEHQIFQKSHPHHNSCDSASSRV*DPADQS Trigger: GCTTTGGTCTGCTGGATCCCAAACTCTGCTACTTGC...GCTGTCACATGAGTTGTGGTGAGGATGGGACTTTTGAAAAATCTGATGTTCCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027849.11 |
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| CDS-3UTR CCA 90 bp | AATGAGTCATCTTTTGTCATGTTAGTGATTGCTGTGCTAGTAGTAGCCCAACATTTGTATACGCCTTCCTaGGGGTTCCTCCTCCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NESSFVMLVIAVLVVAQHLYTPS*GFLLLC Trigger: GCAGAGGAGGAGGAACCCCCAGGAAGGCGTATACAA...ATGTTGGGCTACTACTAGCACAGCAATCACTAACATGACAAAAGATGACTCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| CDS-3UTR CCA 90 bp | AGGCAAGTCTTTTCTAAGTTGAGAGATTCATTCAGATGCATGCCCAGGAGTTTTGATTGGCTACTCTGCTaGGTGCTTTCACCTTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RQVFSKLRDSFRCMPRSFDWLLC*VLSPLG Trigger: CCCCAAAGGTGAAAGCACCCAGCAGAGTAGCCAATC...AAAACTCCTGGGCATGCATCTGAATGAATCTCTCAACTTAGAAAAGACTTGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027849.11 |
||
| 3UTR CAA 72 bp | AGATTGGTTTTGTTCCTCCCTGCTGCTCGGTTGAGATaGGTAGAGTTTGCTCAGCATAACACTGATACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RLVLFLPAARLR*VEFAQHNTDTL Trigger: CAGAGTATCAGTGTTATGCTGAGCAAACTCTACCAATCTCAACCGAGCAGCAGGGAGGAACAAAACCAATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| 3UTR CAA 72 bp | AGGAAACTTGATATTCCCTATGAATGGGTTGGGGGTTaGAGGCCTCTCTGTGATCTGATATGCAGCACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: RKLDIPYEWVGG*RPLCDLICSTV Trigger: TACTGTGCTGCATATCAGATCACAGAGAGGCCTCAAACCCCCAACCCATTCATAGGGAATATCAAGTTTCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| CDS-3UTR TCA 90 bp | GCCAAGAAGTTGAAAGCTAACACAAGTCAAAAGCTAACCCTACCCTGTACTAAGGGTCCTTGTGAGTTCTaGACCTTCTCTCTCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AKKLKANTSQKLTLPCTKGPCEF*TFSLSS Trigger: AGAAGAGAGAGAGAAGGTTCAGAACTCACAAGGACC...CTTAGTACAGGGTAGGGTTAGCTTTTGACTTGTGTTAGCTTTCAACTTCTTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161559.3 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| CDS-3UTR GCA 90 bp | TTAAAGGTTGATGGAATAATCTTTGCCTCATCCTCTAATTCACCAATGGAAAGTCAGACCAAAGCTCTGTaGCTCTGCTCCTGGGAACCG | + |
|
Preference number: 4 (lower is better) Translates to: LKVDGIIFASSSNSPMESQTKAL*LCSWEP Trigger: CGGTTCCCAGGAGCAGAGGCACAGAGCTTTGGTCTG...ACTTTCCATTGGTGAATTAGAGGATGAGGCAAAGATTATTCCATCAACCTTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| CDS-3UTR GCA 90 bp | CAAGTTTTCCAGACACTCAAAGGCCATAGAGCAAACACTGAGGTTGGAAAGCTTGCCATCTTGTCTTTCTaGAGTGCATTGTATACGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QVFQTLKGHRANTEVGKLAILSF*SALYTP Trigger: AGGCGTATACAATGCACTGCAGAAAGACAAGATGGC...AAGCTTTCCAACCTCAGTGTTTGCTCTATGGCCTTTGAGTGTCTGGAAAACTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| 3UTR CAA 72 bp | AGATGTCTTTTTGGTTACTCTAGCTTTGGGAAGAGATaGGTTTTGTTCCTCCCTGCTGCTCGGTTGAGATTG | + |
|
Preference number: 4 (lower is better) Translates to: RCLFGYSSFGKR*VLFLPAARLRL Trigger: CAATCTCAACCGAGCAGCAGGGAGGAACAAAACCAATCTCTTCCCAAAGCTAGAGTAACCAAAAAGACATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| CDS-3UTR TCA 90 bp | TTATATCTGTCTTGCCAAAGGAAACTTGATATTCCCTATGAATGGGTTGGGGGTGGTCCTTGTGAGTTCTaGACCTTCTCTCTCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LYLSCQRKLDIPYEWVGGGPCEF*TFSLSS Trigger: AGAAGAGAGAGAGAAGGTTCAGAACTCACAAGGACC...ACCCCCAACCCATTCATAGGGAATATCAAGTTTCCTTTGGCAAGACAGATATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000161559.3 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| CDS-3UTR GCA 90 bp | CTATTTTCTGTGTCAGTTTGTACACAAGTTATTTGCACTCTTAAAAGCATGGTCGGGTTCCTCCTCCTCTaGTGTTTGCCTCCCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LFSVSVCTQVICTLKSMVGFLLL*CLPPIS Trigger: AGAGATGGGAGGCAAACAGCAGAGGAGGAGGAACCC...GACCATGCTTTTAAGAGTGCAAATAACTTGTGTACAAACTGACACAGAAAATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
||
| CDS-3UTR GCA 90 bp | TTAAAGGTTGATGGAATAATCTTTGCCTCATCCTCTAATTCACCAATGGAAAGTGGGTTCCTCCTCCTCTaGTGTTTGCCTCCCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LKVDGIIFASSSNSPMESGFLLL*CLPPIS Trigger: AGAGATGGGAGGCAAACAGCAGAGGAGGAGGAACCC...ACTTTCCATTGGTGAATTAGAGGATGAGGCAAAGATTATTCCATCAACCTTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| CDS-3UTR GCA 90 bp | GCCAAGAAGTTGAAAGCTAACACAAGTCAAAAGCTAACCCTACCCTGTACTAAGGCCATCTTGTCTTTCTaGAGTGCATTGTATACGCCT | + |
|
Preference number: 4 (lower is better) Translates to: AKKLKANTSQKLTLPCTKAILSF*SALYTP Trigger: AGGCGTATACAATGCACTGCAGAAAGACAAGATGGC...CTTAGTACAGGGTAGGGTTAGCTTTTGACTTGTGTTAGCTTTCAACTTCTTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| CDS-3UTR GCA 90 bp | AAGAAATTGGAACATCAGATTTTTCAAAAGTCCCATCCTCACCACAACTCATGTCTTCTGTTCCCGAACTaGACTGCTTGGAAGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KKLEHQIFQKSHPHHNSCLLFPN*TAWKWL Trigger: CAGCCACTTCCAAGCAGTGCAGTTCGGGAACAGAAG...ACATGAGTTGTGGTGAGGATGGGACTTTTGAAAAATCTGATGTTCCAATTTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027849.11 |
||
| CDS-3UTR GCA 90 bp | GAGTGGGATTTGATTTTGATACCAAAGACAACTGCTAAACCATTGCTTCTCAAGACTCCTGCTGAATTTTaGTCTCAGGTACAGGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: EWDLILIPKTTAKPLLLKTPAEF*SQVQGC Trigger: ACAGCCCTGTACCTGAGAGCAAAATTCAGCAGGAGT...CTTGAGAAGCAATGGTTTAGCAGTTGTCTTTGGTATCAAAATCAAATCCCACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| CDS-3UTR TCA 90 bp | AAGAAATTGGAACATCAGATTTTTCAAAAGTCCCATCCTCACCACAACTCATGTTCTCTGCACTCCTGCTaGATTTTGCTCTCAGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: KKLEHQIFQKSHPHHNSCSLHSC*ILLSGT Trigger: TGTACCTGAGAGCAAAATTCAGCAGGAGTGCAGAGA...ACATGAGTTGTGGTGAGGATGGGACTTTTGAAAAATCTGATGTTCCAATTTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027849.11 |
||
| CDS-3UTR GCA 90 bp | CTATTTTCTGTGTCAGTTTGTACACAAGTTATTTGCACTCTTAAAAGCATGGTCGTTGGCAGCAGTCTCTaGACTCCTGCTGAATTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LFSVSVCTQVICTLKSMVVGSSL*TPAEFC Trigger: GCAAAATTCAGCAGGAGTGCAGAGACTGCTGCCAAC...GACCATGCTTTTAAGAGTGCAAATAACTTGTGTACAAACTGACACAGAAAATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
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| CDS-3UTR GCA 90 bp | AAGAAATTGGAACATCAGATTTTTCAAAAGTCCCATCCTCACCACAACTCATGTGCCATCTTGTCTTTCTaGAGTGCATTGTATACGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KKLEHQIFQKSHPHHNSCAILSF*SALYTP Trigger: AGGCGTATACAATGCACTGCAGAAAGACAAGATGGC...ACATGAGTTGTGGTGAGGATGGGACTTTTGAAAAATCTGATGTTCCAATTTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027849.11 |
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| CDS-3UTR CAA 90 bp | CTTCGGCCCCAATGCAGTCTGTGGCGTCCTGGCACTTGGAGGCATGCCAAAGGGAGGCCATCGTGCCCCTaGCCTCTCCGCCTCTCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LRPQCSLWRPGTWRHAKGRPSCP*PLRLSP Trigger: AGGCGAGAGGCGGAGAGGCAAGGGGCACGATGGCCT...CCCTTTGGCATGCCTCCAAGTGCCAGGACGCCACAGACTGCATTGGGGCCGAAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027849.11 |
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| CDS-3UTR CAA 90 bp | CTGGGCTCTGCAAGGAGAGGAGCCTGCCAGAAGACCCAAGAGCAGGGCTGGGGTTCCGCCTCTCGCCTTTaGTGCCGATCTCACTGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: LGSARRGACQKTQEQGWGSASRL*CRSHCR Trigger: CCTACAGTGAGATCGGCACAAAAGGCGAGAGGCGGA...ACCCCAGCCCTGCTCTTGGGTCTTCTGGCAGGCTCCTCTCCTTGCAGAGCCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
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| CDS-3UTR CAA 90 bp | GGCTGCTGGGAGGCTAAGAGGCTTCTTATGTCGGCAGGCACAACTCATGTGACAAGGCCATCGTGCCCCTaGCCTCTCCGCCTCTCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: GCWEAKRLLMSAGTTHVTRPSCP*PLRLSP Trigger: AGGCGAGAGGCGGAGAGGCAAGGGGCACGATGGCCT...TGTCACATGAGTTGTGCCTGCCGACATAAGAAGCCTCTTAGCCTCCCAGCAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086002.11 ENSMUST00000187313.7 |
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| CDS-3UTR CAA 90 bp | AACACTGAGGTTGGAAAGCTTCGTCTCGTCTCTGTTCTCCCCATCGGCCTCACCAGGCCATCGTGCCCCTaGCCTCTCCGCCTCTCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: NTEVGKLRLVSVLPIGLTRPSCP*PLRLSP Trigger: AGGCGAGAGGCGGAGAGGCAAGGGGCACGATGGCCT...GGTGAGGCCGATGGGGAGAACAGAGACGAGACGAAGCTTTCCAACCTCAGTGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| CDS-3UTR CAA 90 bp | CTTCGGCCCCAATGCAGTCTGTGGCGTCCTGGCACTTGGAGGCATGCCAAAGGGCCCGAACTGCACTGCTaGGAAGTGGCTGTCCTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LRPQCSLWRPGTWRHAKGPELHC*EVAVLV Trigger: TACCAGGACAGCCACTTCCAAGCAGTGCAGTTCGGG...CCCTTTGGCATGCCTCCAAGTGCCAGGACGCCACAGACTGCATTGGGGCCGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027849.11 |
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| CDS TCA 90 bp | GGGAGCTGCTACTGGGTGGCCATGGACTCCACAGAGTGGGGATGCTaGAGACGCTGGCACAGGATTGGCTACTCTGCTGGGTGCTTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: GSCYWVAMDSTEWGC*RRWHRIGYSAGCFH Trigger: GTGAAAGCACCCAGCAGAGTAGCCAATCCTGTGCCAGCGTCTTCAGCATCCCCACTCTGTGGAGTCCATGGCCACCCAGTAGCAGCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027849.11 ENSMUST00000086002.11 ENSMUST00000187313.7 |
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| CDS-3UTR CAA 90 bp | GTCTTCGGCCCCAATGCAGTCTGTGGCGTCCTGGCACTTGGAGGCATGCCAAAGCTCCTCCTCTGCTGTTaGCCTCCCATCTCTGGATCC | + |
|
Preference number: 5 (lower is better) Translates to: VFGPNAVCGVLALGGMPKLLLCC*PPISGS Trigger: GGATCCAGAGATGGGAGGCAAACAGCAGAGGAGGAG...CTTTGGCATGCCTCCAAGTGCCAGGACGCCACAGACTGCATTGGGGCCGAAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027849.11 |
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| CDS-3UTR CAA 90 bp | GATGCCCAGGCACAGGTTACAACCCTCCCTGTCTGTGGCTGTCATGCCCTTGCCCCCGAACTGCACTGCTaGGAAGTGGCTGTCCTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: DAQAQVTTLPVCGCHALAPELHC*EVAVLV Trigger: TACCAGGACAGCCACTTCCAAGCAGTGCAGTTCGGG...GGCAAGGGCATGACAGCCACAGACAGGGAGGGTTGTAACCTGTGCCTGGGCATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000161559.3 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| CDS GCA 90 bp | GCACTGCTTGGAAGTGGCTGTCCTGGTAAAGGCCATCGTGCCCCTTaGCTCTCCGCCTCTCGCCTTTTGTGCCGATCTCACTGTAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: ALLGSGCPGKGHRAP*LSASRLLCRSHCRL Trigger: AAGCCTACAGTGAGATCGGCACAAAAGGCGAGAGGCGGAGAGGCAAGGGGCACGATGGCCTTTACCAGGACAGCCACTTCCAAGCAGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000027849.11 ENSMUST00000086002.11 ENSMUST00000161559.3 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| CDS GCA 90 bp | CAAGTAGCAGAGTTTGGGATCCAGCAGACCAAAGCTCTGTGCCTCTaGTCCTGGGAACCGCACGTGGAGGATGCAGGCGAGAACAGACAC | + |
|
Preference number: 5 (lower is better) Translates to: QVAEFGIQQTKALCL*SWEPHVEDAGENRH Trigger: GTGTCTGTTCTCGCCTGCATCCTCCACGTGCGGTTCCCAGGAGCAGAGGCACAGAGCTTTGGTCTGCTGGATCCCAAACTCTGCTACTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000005907.12 ENSMUST00000027849.11 ENSMUST00000086002.11 ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| CDS GCA 90 bp | AGAGGCTTCTTATGTCGGCAGGCTGGTAAAGGCCATCGTGCCCCTTaGCTCTCCGCCTCTCGCCTTTTGTGCCGATCTCACTGTAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: RGFLCRQAGKGHRAP*LSASRLLCRSHCRL Trigger: AAGCCTACAGTGAGATCGGCACAAAAGGCGAGAGGCGGAGAGGCAAGGGGCACGATGGCCTTTACCAGCCTGCCGACATAAGAAGCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161971.8 |
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| CDS CCA 90 bp | GCAGAGTTTGGGATCCAGCAGACCAAAGCTCTGTGCCTCTGCTCCTaGGAACCGCACGTGGAGGATGCAGGCGAGAACAGACACTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: AEFGIQQTKALCLCS*EPHVEDAGENRHFP Trigger: TGGAAAGTGTCTGTTCTCGCCTGCATCCTCCACGTGCGGTTCCCAGGAGCAGAGGCACAGAGCTTTGGTCTGCTGGATCCCAAACTCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000005907.12 ENSMUST00000027849.11 ENSMUST00000086002.11 ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| CDS CCA 90 bp | GCCTTCCTGGGGGTTCCTCCTCCTCTGCTGTTTGCCTCCCATCTCTaGATCCCGAGCCCGCTTCTTCTCCAAGACGTCATATTCCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: AFLGVPPPLLFASHL*IPSPLLLQDVIFLS Trigger: AGAGAGGAATATGACGTCTTGGAGAAGAAGCGGGCTCGGGATCCAGAGATGGGAGGCAAACAGCAGAGGAGGAGGAACCCCCAGGAAGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000005907.12 ENSMUST00000027849.11 ENSMUST00000086002.11 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| CDS CCA 90 bp | CATGGACTCCACAGAGTGGGGATGCTGAAGACGCTGGCACAGGATTaGCTACTCTGCTGGGTGCTTTCACCTTTGGGGCGGGCTCTTAAC | + |
|
Preference number: 5 (lower is better) Translates to: HGLHRVGMLKTLAQD*LLCWVLSPLGRALN Trigger: GTTAAGAGCCCGCCCCAAAGGTGAAAGCACCCAGCAGAGTAGCCAATCCTGTGCCAGCGTCTTCAGCATCCCCACTCTGTGGAGTCCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027849.11 ENSMUST00000086002.11 ENSMUST00000187313.7 |
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| CDS CCA 90 bp | TACGCCTTCCTGGGGGTTCCTCCTCCTCTGTTTGCCTCCCATCTCTaGATCCCGAGCCCGCTTCTTCTCCAAGACGTCATATTCCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: YAFLGVPPPLFASHL*IPSPLLLQDVIFLS Trigger: AGAGAGGAATATGACGTCTTGGAGAAGAAGCGGGCTCGGGATCCAGAGATGGGAGGCAAACAGAGGAGGAGGAACCCCCAGGAAGGCGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161559.3 |
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| CDS-3UTR CAA 90 bp | AAGAGGCTTCTTATGTCGGCAGGCACAACTCATGTGACAGCAGCCAGGGTCATCTTGGGGTCCTGCAGGTaGGCAGCAGTCTCTGCACTC | + |
|
Preference number: 5 (lower is better) Translates to: KRLLMSAGTTHVTAARVILGSCR*AAVSAL Trigger: GAGTGCAGAGACTGCTGCCAACCTGCAGGACCCCAA...GATGACCCTGGCTGCTGTCACATGAGTTGTGCCTGCCGACATAAGAAGCCTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086002.11 ENSMUST00000187313.7 |
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| CDS-3UTR CAA 90 bp | ATGCAGCACAGTATGCAGAACCATGCAGGTGATGTGTGGGGTGTCCAGTGGGTTTTGGGGTCCTGCAGGTaGGCAGCAGTCTCTGCACTC | + |
|
Preference number: 5 (lower is better) Translates to: MQHSMQNHAGDVWGVQWVLGSCR*AAVSAL Trigger: GAGTGCAGAGACTGCTGCCAACCTGCAGGACCCCAA...AACCCACTGGACACCCCACACATCACCTGCATGGTTCTGCATACTGTGCTGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| CDS-3UTR CAA 90 bp | GATACGGCTGCTGGGAGGCTAAGAGGCTTCTTATGTCGGCAGGCACAACTCATGCTCCTCCTCTGCTGTTaGCCTCCCATCTCTGGATCC | + |
|
Preference number: 5 (lower is better) Translates to: DTAAGRLRGFLCRQAQLMLLLCC*PPISGS Trigger: GGATCCAGAGATGGGAGGCAAACAGCAGAGGAGGAG...CATGAGTTGTGCCTGCCGACATAAGAAGCCTCTTAGCCTCCCAGCAGCCGTATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086002.11 ENSMUST00000187313.7 |
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| CDS-3UTR CAA 90 bp | CTAGCAGGGTGGTCAGGAAACCTCTTCCTCAGCATTCGTCCAGTTCATACCCGGCTCCTCCTCTGCTGTTaGCCTCCCATCTCTGGATCC | + |
|
Preference number: 5 (lower is better) Translates to: LAGWSGNLFLSIRPVHTRLLLCC*PPISGS Trigger: GGATCCAGAGATGGGAGGCAAACAGCAGAGGAGGAG...CCGGGTATGAACTGGACGAATGCTGAGGAAGAGGTTTCCTGACCACCCTGCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| CDS-3UTR CAA 90 bp | TACGGCTGCTGGGAGGCTAAGAGGCTTCTTATGTCGGCAGGCACAACTCATGTGCTCCTCCTCTGCTGTTaGCCTCCCATCTCTGGATCC | + |
|
Preference number: 5 (lower is better) Translates to: YGCWEAKRLLMSAGTTHVLLLCC*PPISGS Trigger: GGATCCAGAGATGGGAGGCAAACAGCAGAGGAGGAG...CACATGAGTTGTGCCTGCCGACATAAGAAGCCTCTTAGCCTCCCAGCAGCCGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086002.11 ENSMUST00000187313.7 |
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| CDS-3UTR CAA 90 bp | GAGGCTAAGAGGCTTCTTATGTCGGCAGGCACAACTCATGTGACAGCAGCCAGGTCCGCCTCTCGCCTTTaGTGCCGATCTCACTGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: EAKRLLMSAGTTHVTAARSASRL*CRSHCR Trigger: CCTACAGTGAGATCGGCACAAAAGGCGAGAGGCGGA...CCTGGCTGCTGTCACATGAGTTGTGCCTGCCGACATAAGAAGCCTCTTAGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086002.11 ENSMUST00000187313.7 |
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| CDS-3UTR CAA 90 bp | GGCTGCTGGGAGGCTAAGAGGCTTCTTATGTCGGCAGGCACAACTCATGTGACATCCGCCTCTCGCCTTTaGTGCCGATCTCACTGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: GCWEAKRLLMSAGTTHVTSASRL*CRSHCR Trigger: CCTACAGTGAGATCGGCACAAAAGGCGAGAGGCGGA...TGTCACATGAGTTGTGCCTGCCGACATAAGAAGCCTCTTAGCCTCCCAGCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086002.11 ENSMUST00000187313.7 |
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| CDS-3UTR CAA 90 bp | GTGTTAGGATACGGCTGCTGGGAGGCTAAGAGGCTTCTTATGTCGGCAGGCACACCCGAACTGCACTGCTaGGAAGTGGCTGTCCTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: VLGYGCWEAKRLLMSAGTPELHC*EVAVLV Trigger: TACCAGGACAGCCACTTCCAAGCAGTGCAGTTCGGG...TGTGCCTGCCGACATAAGAAGCCTCTTAGCCTCCCAGCAGCCGTATCCTAACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086002.11 ENSMUST00000187313.7 |
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| CDS GCA 90 bp | GCCTCTCCGCCTCTCGCCTTTTGTGCCGATCTCACTGTAGGCTTCTaGCATCTTGTCTTTCTGCAGTGCATTGTATACGCCTTCCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: ASPPLAFCADLTVGF*HLVFLQCIVYAFLG Trigger: CCCCAGGAAGGCGTATACAATGCACTGCAGAAAGACAAGATGGCAGAAGCCTACAGTGAGATCGGCACAAAAGGCGAGAGGCGGAGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000005907.12 ENSMUST00000027849.11 ENSMUST00000086002.11 ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| CDS-3UTR CAA 90 bp | TTACAGCAGGAGCGGAGCGAGTCAATACCCATAGAACAATACACACAGTACCTAAGGCCATCGTGCCCCTaGCCTCTCCGCCTCTCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LQQERSESIPIEQYTQYLRPSCP*PLRLSP Trigger: AGGCGAGAGGCGGAGAGGCAAGGGGCACGATGGCCT...TAGGTACTGTGTGTATTGTTCTATGGGTATTGACTCGCTCCGCTCCTGCTGTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
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| CDS TCA 90 bp | CCCGCTTCTTCTCCAAGACGTCATATTCCTCTCTTCGCCCTAGATTaGGCTCATTGTAGAGCTGGTTGGGGTCCTGCAGGTTGGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PASSPRRHIPLFALD*AHCRAGWGPAGWQQ Trigger: CTGCTGCCAACCTGCAGGACCCCAACCAGCTCTACAATGAGCTCAATCTAGGGCGAAGAGAGGAATATGACGTCTTGGAGAAGAAGCGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000005907.12 ENSMUST00000027849.11 ENSMUST00000086002.11 ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| CDS TCA 90 bp | GGGTGCTTTCACCTTTGGGGCGGGCTCTTAACCCAAGGGTCCTTGTaGGTTCTGAACCTTCTCTCTCTCTTCTGTTCCCGAACTGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: GCFHLWGGLLTQGSL*VLNLLSLFCSRTAL Trigger: CAGTGCAGTTCGGGAACAGAAGAGAGAGAGAAGGTTCAGAACTCACAAGGACCCTTGGGTTAAGAGCCCGCCCCAAAGGTGAAAGCACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027849.11 ENSMUST00000086002.11 ENSMUST00000187313.7 |
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| CDS TCA 90 bp | TATGTCGGCAGGCTTTGGGGCGGGCTCTTAACCCAAGGGTCCTTGTaGGTTCTGAACCTTCTCTCTCTCTTCTGTTCCCGAACTGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: YVGRLWGGLLTQGSL*VLNLLSLFCSRTAL Trigger: CAGTGCAGTTCGGGAACAGAAGAGAGAGAGAAGGTTCAGAACTCACAAGGACCCTTGGGTTAAGAGCCCGCCCCAAAGCCTGCCGACATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161559.3 ENSMUST00000178336.8 |
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| CDS GCA 90 bp | GGGGTCCTGCAGGTTGGCAGCAGTCTCTGCACTCCTGCTGAATTTTaGTCTCAGGTACAGGGCTGTGATGATGACTCCGTAGATGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: GVLQVGSSLCTPAEF*SQVQGCDDDSVDEE Trigger: CTCTTCATCTACGGAGTCATCATCACAGCCCTGTACCTGAGAGCAAAATTCAGCAGGAGTGCAGAGACTGCTGCCAACCTGCAGGACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000005907.12 ENSMUST00000027849.11 ENSMUST00000086002.11 ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| CDS CCA 90 bp | GCTTCTGCCATCTTGTCTTTCTGCAGTGCATTGTATACGCCTTCCTaGGGGTTCCTCCTCCTCTGCTGTTTGCCTCCCATCTCTGGATCC | + |
|
Preference number: 5 (lower is better) Translates to: ASAILSFCSALYTPS*GFLLLCCLPPISGS Trigger: GGATCCAGAGATGGGAGGCAAACAGCAGAGGAGGAGGAACCCCCAGGAAGGCGTATACAATGCACTGCAGAAAGACAAGATGGCAGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000005907.12 ENSMUST00000027849.11 ENSMUST00000086002.11 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| CDS CCA 90 bp | GCTTCTGCCATCTTGTCTTTCTGCAGTGCATTGTATACGCCTTCCTaGGGGTTCCTCCTCCTCTGTTTGCCTCCCATCTCTGGATCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: ASAILSFCSALYTPS*GFLLLCLPPISGSR Trigger: TCGGGATCCAGAGATGGGAGGCAAACAGAGGAGGAGGAACCCCCAGGAAGGCGTATACAATGCACTGCAGAAAGACAAGATGGCAGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161559.3 |
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| CDS GCA 90 bp | TGTGCCGATCTCACTGTAGGCTTCTGCCATCTTGTCTTTCTGCAGTaGATTGTATACGCCTTCCTGGGGGTTCCTCCTCCTCTGTTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: CADLTVGFCHLVFLQ*IVYAFLGVPPPLFA Trigger: GGCAAACAGAGGAGGAGGAACCCCCAGGAAGGCGTATACAATGCACTGCAGAAAGACAAGATGGCAGAAGCCTACAGTGAGATCGGCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161559.3 |
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| CDS-3UTR CAA 90 bp | CTTTGGGAAGAGATTGGTTTTGTTCCTCCCTGCTGCTCGGTTGAGATTGGTAGATTGGGGTCCTGCAGGTaGGCAGCAGTCTCTGCACTC | + |
|
Preference number: 5 (lower is better) Translates to: LWEEIGFVPPCCSVEIGRLGSCR*AAVSAL Trigger: GAGTGCAGAGACTGCTGCCAACCTGCAGGACCCCAA...TCTACCAATCTCAACCGAGCAGCAGGGAGGAACAAAACCAATCTCTTCCCAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| CDS-3UTR CAA 90 bp | GATGTCTTTTTGGTTACTCTAGCTTTGGGAAGAGATTGGTTTTGTTCCTCCCTGAGGCCATCGTGCCCCTaGCCTCTCCGCCTCTCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: DVFLVTLALGRDWFCSSLRPSCP*PLRLSP Trigger: AGGCGAGAGGCGGAGAGGCAAGGGGCACGATGGCCT...CAGGGAGGAACAAAACCAATCTCTTCCCAAAGCTAGAGTAACCAAAAAGACATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| CDS GCA 90 bp | TGTGCCGATCTCACTGTAGGCTTCTGCCATCTTGTCTTTCTGCAGTaGATTGTATACGCCTTCCTGGGGGTTCCTCCTCCTCTGCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: CADLTVGFCHLVFLQ*IVYAFLGVPPPLLF Trigger: AAACAGCAGAGGAGGAGGAACCCCCAGGAAGGCGTATACAATGCACTGCAGAAAGACAAGATGGCAGAAGCCTACAGTGAGATCGGCACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000005907.12 ENSMUST00000027849.11 ENSMUST00000086002.11 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| CDS-3UTR CAA 90 bp | CCCATAGAACAATACACACAGTACCTAGGGCTTCTCTGGGGACTTTACAAAGCATTGGGGTCCTGCAGGTaGGCAGCAGTCTCTGCACTC | + |
|
Preference number: 5 (lower is better) Translates to: PIEQYTQYLGLLWGLYKALGSCR*AAVSAL Trigger: GAGTGCAGAGACTGCTGCCAACCTGCAGGACCCCAA...TGCTTTGTAAAGTCCCCAGAGAAGCCCTAGGTACTGTGTGTATTGTTCTATGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
||
| CDS-3UTR CAA 90 bp | CATACAAATAAAACTAGGCCATCCAACCTGTTGGAGTACCAGTCAGGATTTAGTAGGCCATCGTGCCCCTaGCCTCTCCGCCTCTCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: HTNKTRPSNLLEYQSGFSRPSCP*PLRLSP Trigger: AGGCGAGAGGCGGAGAGGCAAGGGGCACGATGGCCT...ACTAAATCCTGACTGGTACTCCAACAGGTTGGATGGCCTAGTTTTATTTGTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| CDS-3UTR CAA 90 bp | CTTTGGGAAGAGATTGGTTTTGTTCCTCCCTGCTGCTCGGTTGAGATTGGTAGACCCGAACTGCACTGCTaGGAAGTGGCTGTCCTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LWEEIGFVPPCCSVEIGRPELHC*EVAVLV Trigger: TACCAGGACAGCCACTTCCAAGCAGTGCAGTTCGGG...TCTACCAATCTCAACCGAGCAGCAGGGAGGAACAAAACCAATCTCTTCCCAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161559.3 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| CDS-3UTR CAA 90 bp | GAGTGGGATTTGATTTTGATACCAAAGACAACTGCTAAACCATTGCTTCTCAAGAGGCCATCGTGCCCCTaGCCTCTCCGCCTCTCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: EWDLILIPKTTAKPLLLKRPSCP*PLRLSP Trigger: AGGCGAGAGGCGGAGAGGCAAGGGGCACGATGGCCT...CTTGAGAAGCAATGGTTTAGCAGTTGTCTTTGGTATCAAAATCAAATCCCACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
||
| CDS-3UTR CAA 90 bp | GTTCATACCCGGTGTATGGTAGGATTTGTGAACTGGGTTTCTTCCAACCATCATTCCGCCTCTCGCCTTTaGTGCCGATCTCACTGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: VHTRCMVGFVNWVSSNHHSASRL*CRSHCR Trigger: CCTACAGTGAGATCGGCACAAAAGGCGAGAGGCGGA...ATGATGGTTGGAAGAAACCCAGTTCACAAATCCTACCATACACCGGGTATGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| CDS-3UTR CAA 90 bp | AGGCAAGTCTTTTCTAAGTTGAGAGATTCATTCAGATGCATGCCCAGGAGTTTTTTGGGGTCCTGCAGGTaGGCAGCAGTCTCTGCACTC | + |
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Preference number: 5 (lower is better) Translates to: RQVFSKLRDSFRCMPRSFLGSCR*AAVSAL Trigger: GAGTGCAGAGACTGCTGCCAACCTGCAGGACCCCAA...AAAACTCCTGGGCATGCATCTGAATGAATCTCTCAACTTAGAAAAGACTTGCCT 49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000027849.11 |
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| CDS-3UTR CAA 90 bp | TTATATCTGTCTTGCCAAAGGAAACTTGATATTCCCTATGAATGGGTTGGGGGTTCCGCCTCTCGCCTTTaGTGCCGATCTCACTGTAGG | + |
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Preference number: 5 (lower is better) Translates to: LYLSCQRKLDIPYEWVGGSASRL*CRSHCR Trigger: CCTACAGTGAGATCGGCACAAAAGGCGAGAGGCGGA...ACCCCCAACCCATTCATAGGGAATATCAAGTTTCCTTTGGCAAGACAGATATAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| CDS-3UTR CAA 90 bp | CATACAAATAAAACTAGGCCATCCAACCTGTTGGAGTACCAGTCAGGATTTAGTCCCGAACTGCACTGCTaGGAAGTGGCTGTCCTGGTA | + |
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Preference number: 5 (lower is better) Translates to: HTNKTRPSNLLEYQSGFSPELHC*EVAVLV Trigger: TACCAGGACAGCCACTTCCAAGCAGTGCAGTTCGGG...ACTAAATCCTGACTGGTACTCCAACAGGTTGGATGGCCTAGTTTTATTTGTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161559.3 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| CDS-3UTR CAA 90 bp | ATTACATGTTACCTCAACACTGCAAAGTGTGACAACAGAAGCCAAATTTACAGCCTCCTCCTCTGCTGTTaGCCTCCCATCTCTGGATCC | + |
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Preference number: 5 (lower is better) Translates to: ITCYLNTAKCDNRSQIYSLLLCC*PPISGS Trigger: GGATCCAGAGATGGGAGGCAAACAGCAGAGGAGGAG...GCTGTAAATTTGGCTTCTGTTGTCACACTTTGCAGTGTTGAGGTAACATGTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005907.12 |
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| CDS-3UTR CAA 90 bp | GTTGATGGAATAATCTTTGCCTCATCCTCTAATTCACCAATGGAAAGTAAGTGTCTCCTCCTCTGCTGTTaGCCTCCCATCTCTGGATCC | + |
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Preference number: 5 (lower is better) Translates to: VDGIIFASSSNSPMESKCLLLCC*PPISGS Trigger: GGATCCAGAGATGGGAGGCAAACAGCAGAGGAGGAG...ACACTTACTTTCCATTGGTGAATTAGAGGATGAGGCAAAGATTATTCCATCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| CDS-3UTR CAA 90 bp | AAGAAATTGGAACATCAGATTTTTCAAAAGTCCCATCCTCACCACAACTCATGTTCCGCCTCTCGCCTTTaGTGCCGATCTCACTGTAGG | + |
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Preference number: 5 (lower is better) Translates to: KKLEHQIFQKSHPHHNSCSASRL*CRSHCR Trigger: CCTACAGTGAGATCGGCACAAAAGGCGAGAGGCGGA...ACATGAGTTGTGGTGAGGATGGGACTTTTGAAAAATCTGATGTTCCAATTTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027849.11 |
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| CDS-3UTR CAA 90 bp | GTTGATGGAATAATCTTTGCCTCATCCTCTAATTCACCAATGGAAAGTAAGTGTTCCGCCTCTCGCCTTTaGTGCCGATCTCACTGTAGG | + |
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Preference number: 5 (lower is better) Translates to: VDGIIFASSSNSPMESKCSASRL*CRSHCR Trigger: CCTACAGTGAGATCGGCACAAAAGGCGAGAGGCGGA...ACACTTACTTTCCATTGGTGAATTAGAGGATGAGGCAAAGATTATTCCATCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| CDS-3UTR CAA 90 bp | GAAGATGTCTTTTTGGTTACTCTAGCTTTGGGAAGAGATTGGTTTTGTTCCTCCCCTGTAGAGCTGTTTTaGCTGCACAGTGTGTTAGGA | + |
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Preference number: 5 (lower is better) Translates to: EDVFLVTLALGRDWFCSSPVELF*LHSVLG Trigger: TCCTAACACACTGTGCAGCAAAAACAGCTCTACAGG...GGAGGAACAAAACCAATCTCTTCCCAAAGCTAGAGTAACCAAAAAGACATCTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000161971.8 |
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| CDS GCA 72 bp | GCATTGTATACGCCTTCCTGGGGGTTCCTCCTCCTCTaGTGTTTGCCTCCCATCTCTGGATCCCGAGCCCGC | + |
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Preference number: 6 (lower is better) Translates to: ALYTPSWGFLLL*CLPPISGSRAR Trigger: GCGGGCTCGGGATCCAGAGATGGGAGGCAAACAGCAGAGGAGGAGGAACCCCCAGGAAGGCGTATACAATGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000005907.12 ENSMUST00000027849.11 ENSMUST00000086002.11 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| CDS GCA 72 bp | GGAAGTGGCTGTCCTGGTAAAGGCCATCGTGCCCCTTaGCTCTCCGCCTCTCGCCTTTTGTGCCGATCTCAC | + |
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Preference number: 6 (lower is better) Translates to: GSGCPGKGHRAP*LSASRLLCRSH Trigger: GTGAGATCGGCACAAAAGGCGAGAGGCGGAGAGGCAAGGGGCACGATGGCCTTTACCAGGACAGCCACTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000027849.11 ENSMUST00000086002.11 ENSMUST00000161559.3 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| CDS GCA 72 bp | ATACGCCTTCCTGGGGGTTCCTCCTCCTCTGCTGTTTaGCTCCCATCTCTGGATCCCGAGCCCGCTTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: IRLPGGSSSSAV*LPSLDPEPASS Trigger: AGAAGAAGCGGGCTCGGGATCCAGAGATGGGAGGCAAACAGCAGAGGAGGAGGAACCCCCAGGAAGGCGTAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000005907.12 ENSMUST00000027849.11 ENSMUST00000086002.11 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| CDS GCA 72 bp | TTATGTCGGCAGGCTGGTAAAGGCCATCGTGCCCCTTaGCTCTCCGCCTCTCGCCTTTTGTGCCGATCTCAC | + |
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Preference number: 6 (lower is better) Translates to: LCRQAGKGHRAP*LSASRLLCRSH Trigger: GTGAGATCGGCACAAAAGGCGAGAGGCGGAGAGGCAAGGGGCACGATGGCCTTTACCAGCCTGCCGACATAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161971.8 |
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| CDS CCA 72 bp | CACAGAGTGGGGATGCTGAAGACGCTGGCACAGGATTaGCTACTCTGCTGGGTGCTTTCACCTTTGGGGCGG | + |
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Preference number: 6 (lower is better) Translates to: HRVGMLKTLAQD*LLCWVLSPLGR Trigger: CCGCCCCAAAGGTGAAAGCACCCAGCAGAGTAGCCAATCCTGTGCCAGCGTCTTCAGCATCCCCACTCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027849.11 ENSMUST00000086002.11 ENSMUST00000187313.7 |
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| CDS CAA 72 bp | TATACGCCTTCCTGGGGGTTCCTCCTCCTCTGCTGTTaGCCTCCCATCTCTGGATCCCGAGCCCGCTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: YTPSWGFLLLCC*PPISGSRARFF Trigger: GAAGAAGCGGGCTCGGGATCCAGAGATGGGAGGCAAACAGCAGAGGAGGAGGAACCCCCAGGAAGGCGTATA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000005907.12 ENSMUST00000027849.11 ENSMUST00000086002.11 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| CDS CAA 72 bp | GGCCATCGTGCCCCTTGCCTCTCCGCCTCTCGCCTTTaGTGCCGATCTCACTGTAGGCTTCTGCCATCTTGT | + |
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Preference number: 6 (lower is better) Translates to: GHRAPCLSASRL*CRSHCRLLPSC Trigger: ACAAGATGGCAGAAGCCTACAGTGAGATCGGCACAAAAGGCGAGAGGCGGAGAGGCAAGGGGCACGATGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000005907.12 ENSMUST00000027849.11 ENSMUST00000086002.11 ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| CDS CAA 72 bp | CCACAGAGTGGGGATGCTGAAGACGCTGGCACAGGATaGGCTACTCTGCTGGGTGCTTTCACCTTTGGGGCG | + |
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Preference number: 6 (lower is better) Translates to: PQSGDAEDAGTG*ATLLGAFTFGA Trigger: CGCCCCAAAGGTGAAAGCACCCAGCAGAGTAGCCAATCCTGTGCCAGCGTCTTCAGCATCCCCACTCTGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027849.11 ENSMUST00000086002.11 ENSMUST00000187313.7 |
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| CDS CAA 90 bp | AGTGCATTGTATACGCCTTCCTGGGGGTTCCTCCTCCTCTGCTGTTaGCCTCCCATCTCTGGATCCCGAGCCCGCTTCTTCTCCAAGACG | + |
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Preference number: 6 (lower is better) Translates to: SALYTPSWGFLLLCC*PPISGSRARFFSKT Trigger: CGTCTTGGAGAAGAAGCGGGCTCGGGATCCAGAGATGGGAGGCAAACAGCAGAGGAGGAGGAACCCCCAGGAAGGCGTATACAATGCACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000005907.12 ENSMUST00000027849.11 ENSMUST00000086002.11 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| CDS GCA 72 bp | GTAGCAGAGTTTGGGATCCAGCAGACCAAAGCTCTGTaGCTCTGCTCCTGGGAACCGCACGTGGAGGATGCA | + |
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Preference number: 6 (lower is better) Translates to: VAEFGIQQTKAL*LCSWEPHVEDA Trigger: TGCATCCTCCACGTGCGGTTCCCAGGAGCAGAGGCACAGAGCTTTGGTCTGCTGGATCCCAAACTCTGCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000005907.12 ENSMUST00000027849.11 ENSMUST00000086002.11 ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| CDS CCA 72 bp | GGGGTTCCTCCTCCTCTGCTGTTTGCCTCCCATCTCTaGATCCCGAGCCCGCTTCTTCTCCAAGACGTCATA | + |
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Preference number: 6 (lower is better) Translates to: GVPPPLLFASHL*IPSPLLLQDVI Trigger: TATGACGTCTTGGAGAAGAAGCGGGCTCGGGATCCAGAGATGGGAGGCAAACAGCAGAGGAGGAGGAACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000005907.12 ENSMUST00000027849.11 ENSMUST00000086002.11 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| CDS GCA 72 bp | CATCGTGCCCCTTGCCTCTCCGCCTCTCGCCTTTTGTaGCGATCTCACTGTAGGCTTCTGCCATCTTGTCTT | + |
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Preference number: 6 (lower is better) Translates to: HRAPCLSASRLL*RSHCRLLPSCL Trigger: AAGACAAGATGGCAGAAGCCTACAGTGAGATCGGCACAAAAGGCGAGAGGCGGAGAGGCAAGGGGCACGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000005907.12 ENSMUST00000027849.11 ENSMUST00000086002.11 ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| CDS CAA 72 bp | GCACAGGATTGGCTACTCTGCTGGGTGCTTTCACCTTaGGGGCGGGCTCTTAACCCAAGGGTCCTTGTGAGT | + |
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Preference number: 6 (lower is better) Translates to: AQDWLLCWVLSP*GRALNPRVLVS Trigger: ACTCACAAGGACCCTTGGGTTAAGAGCCCGCCCCAAAGGTGAAAGCACCCAGCAGAGTAGCCAATCCTGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027849.11 ENSMUST00000086002.11 ENSMUST00000187313.7 |
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| CDS CAA 90 bp | AAGACGCTGGCACAGGATTGGCTACTCTGCTGGGTGCTTTCACCTTaGGGGCGGGCTCTTAACCCAAGGGTCCTTGTGAGTTCTGAACCT | + |
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Preference number: 6 (lower is better) Translates to: KTLAQDWLLCWVLSP*GRALNPRVLVSSEP Trigger: AGGTTCAGAACTCACAAGGACCCTTGGGTTAAGAGCCCGCCCCAAAGGTGAAAGCACCCAGCAGAGTAGCCAATCCTGTGCCAGCGTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027849.11 ENSMUST00000086002.11 ENSMUST00000187313.7 |
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| CDS TCA 72 bp | CACCTTTGGGGCGGGCTCTTAACCCAAGGGTCCTTGTaGGTTCTGAACCTTCTCTCTCTCTTCTGTTCCCGA | + |
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Preference number: 6 (lower is better) Translates to: HLWGGLLTQGSL*VLNLLSLFCSR Trigger: TCGGGAACAGAAGAGAGAGAGAAGGTTCAGAACTCACAAGGACCCTTGGGTTAAGAGCCCGCCCCAAAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027849.11 ENSMUST00000086002.11 ENSMUST00000187313.7 |
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| CDS TCA 72 bp | AGGCTTTGGGGCGGGCTCTTAACCCAAGGGTCCTTGTaGGTTCTGAACCTTCTCTCTCTCTTCTGTTCCCGA | + |
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Preference number: 6 (lower is better) Translates to: RLWGGLLTQGSL*VLNLLSLFCSR Trigger: TCGGGAACAGAAGAGAGAGAGAAGGTTCAGAACTCACAAGGACCCTTGGGTTAAGAGCCCGCCCCAAAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161559.3 ENSMUST00000178336.8 |
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| CDS GCA 72 bp | CAGGTTGGCAGCAGTCTCTGCACTCCTGCTGAATTTTaGTCTCAGGTACAGGGCTGTGATGATGACTCCGTA | + |
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Preference number: 6 (lower is better) Translates to: QVGSSLCTPAEF*SQVQGCDDDSV Trigger: TACGGAGTCATCATCACAGCCCTGTACCTGAGAGCAAAATTCAGCAGGAGTGCAGAGACTGCTGCCAACCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000005907.12 ENSMUST00000027849.11 ENSMUST00000086002.11 ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| CDS GCA 72 bp | CTCACTGTAGGCTTCTGCCATCTTGTCTTTCTGCAGTaGATTGTATACGCCTTCCTGGGGGTTCCTCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: LTVGFCHLVFLQ*IVYAFLGVPPP Trigger: AGGAGGAGGAACCCCCAGGAAGGCGTATACAATGCACTGCAGAAAGACAAGATGGCAGAAGCCTACAGTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000005907.12 ENSMUST00000027849.11 ENSMUST00000086002.11 ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| CDS CCA 72 bp | ATCTTGTCTTTCTGCAGTGCATTGTATACGCCTTCCTaGGGGTTCCTCCTCCTCTGCTGTTTGCCTCCCATC | + |
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Preference number: 6 (lower is better) Translates to: ILSFCSALYTPS*GFLLLCCLPPI Trigger: GATGGGAGGCAAACAGCAGAGGAGGAGGAACCCCCAGGAAGGCGTATACAATGCACTGCAGAAAGACAAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000005907.12 ENSMUST00000027849.11 ENSMUST00000086002.11 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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| CDS GCA 72 bp | CCTCTCGCCTTTTGTGCCGATCTCACTGTAGGCTTCTaGCATCTTGTCTTTCTGCAGTGCATTGTATACGCC | + |
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Preference number: 6 (lower is better) Translates to: PLAFCADLTVGF*HLVFLQCIVYA Trigger: GGCGTATACAATGCACTGCAGAAAGACAAGATGGCAGAAGCCTACAGTGAGATCGGCACAAAAGGCGAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000005907.12 ENSMUST00000027849.11 ENSMUST00000086002.11 ENSMUST00000161559.3 ENSMUST00000161971.8 ENSMUST00000178336.8 ENSMUST00000187313.7 |
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