Pregenerated sensors for CD244A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004709Ensembl transcript IDs: ENSMUST00000004829.13, ENSMUST00000194797.2
Found 171 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACAACGATGTGGGGTGATCAGGGGTTCCTGCCTCTGTGGGAGAACTaGCAGCCAGCTCACAGCCAGACATCACAGCTTCAAAGAGGACCT | + |
|
Preference number: 1 (lower is better) Translates to: TTMWGDQGFLPLWEN*QPAHSQTSQLQRGP Trigger: AGGTCCTCTTTGAAGCTGTGATGTCTGGCTGTGAGCTGGCTGGCAGTTCTCCCACAGAGGCAGGAACCCCTGATCACCCCACATCGTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR CCA 90 bp | CGGTCAGAAACAACGATGTGGGGTGATCAGGGGTTCCTGCCTCTGTaGGAGAACTGCCAGCCAGCTCACAGCCAGACATCACAGCTTCAA | + |
|
Preference number: 1 (lower is better) Translates to: RSETTMWGDQGFLPL*ENCQPAHSQTSQLQ Trigger: TTGAAGCTGTGATGTCTGGCTGTGAGCTGGCTGGCAGTTCTCCCACAGAGGCAGGAACCCCTGATCACCCCACATCGTTGTTTCTGACCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR GCA 90 bp | AAGTCCACCTGCCTCTGCCTCCTGGATGCTGGAATTGAAGACATGTaGCAGCACCACCCAGCTTCTCCATCATCTCTTATTGTCTCTGCT | + |
|
Preference number: 1 (lower is better) Translates to: KSTCLCLLDAGIEDM*QHHPASPSSLIVSA Trigger: AGCAGAGACAATAAGAGATGATGGAGAAGCTGGGTGGTGCTGGCACATGTCTTCAATTCCAGCATCCAGGAGGCAGAGGCAGGTGGACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR CCA 90 bp | GGTGCCTACCTAGAGCTTTCGCCCCTATGGTACTGGAAGGGTCTCTaGGTGCTACCAAAGGAGAAAGGTAAACACAAACCCAGCTACAAA | + |
|
Preference number: 1 (lower is better) Translates to: GAYLELSPLWYWKGL*VLPKEKGKHKPSYK Trigger: TTTGTAGCTGGGTTTGTGTTTACCTTTCTCCTTTGGTAGCACCCAGAGACCCTTCCAGTACCATAGGGGCGAAAGCTCTAGGTAGGCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194797.2 |
||
| 3UTR CCA 90 bp | ACATGGAGAAGTGGATCTGGTGCCTACCTAGAGCTTTCGCCCCTATaGTACTGGAAGGGTCTCTGGGTGCTACCAAAGGAGAAAGGTAAA | + |
|
Preference number: 1 (lower is better) Translates to: TWRSGSGAYLELSPL*YWKGLWVLPKEKGK Trigger: TTTACCTTTCTCCTTTGGTAGCACCCAGAGACCCTTCCAGTACCATAGGGGCGAAAGCTCTAGGTAGGCACCAGATCCACTTCTCCATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194797.2 |
||
| 3UTR TCA 90 bp | GACAAGAGGATCTCTGTGAGTTTGAAGGCAGCGTGGTTTACACAGTaGGAATCAGGAAAGCCAGGGTGGGATAGTGAGACCCTCTCTTCA | + |
|
Preference number: 1 (lower is better) Translates to: DKRISVSLKAAWFTQ*ESGKPGWDSETLSS Trigger: TGAAGAGAGGGTCTCACTATCCCACCCTGGCTTTCCTGATTCTCACTGTGTAAACCACGCTGCCTTCAAACTCACAGAGATCCTCTTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR GCA 90 bp | CATGTGCCAGCACCACCCAGCTTCTCCATCATCTCTTATTGTCTCTaGTTACCAATCACCTTGACTCCACTCCCAGTAACTGCCTCAAGA | + |
|
Preference number: 1 (lower is better) Translates to: HVPAPPSFSIISYCL*LPITLTPLPVTASR Trigger: TCTTGAGGCAGTTACTGGGAGTGGAGTCAAGGTGATTGGTAAGCAGAGACAATAAGAGATGATGGAGAAGCTGGGTGGTGCTGGCACATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR GCA 90 bp | AGACAAAGCCTACACAGATCATTGAACATGGAGAAGTGGATCTGGTaGCTACCTAGAGCTTTCGCCCCTATGGTACTGGAAGGGTCTCTG | + |
|
Preference number: 1 (lower is better) Translates to: RQSLHRSLNMEKWIW*LPRAFAPMVLEGSL Trigger: CAGAGACCCTTCCAGTACCATAGGGGCGAAAGCTCTAGGTAGGCACCAGATCCACTTCTCCATGTTCAATGATCTGTGTAGGCTTTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194797.2 |
||
| 3UTR CCA 90 bp | GTGCCTTATTCAGTCATCTTCAGAGAAGCTTCCTCCTGCAGAAGATaGGAACAAACACAGAGACCCACAGCCAAGCAATGTGTCGAGAGC | + |
|
Preference number: 1 (lower is better) Translates to: VPYSVIFREASSCRR*EQTQRPTAKQCVES Trigger: GCTCTCGACACATTGCTTGGCTGTGGGTCTCTGTGTTTGTTCCCATCTTCTGCAGGAGGAAGCTTCTCTGAAGATGACTGAATAAGGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194797.2 |
||
| 3UTR CCA 90 bp | AGAAGTGGATCTGGTGCCTACCTAGAGCTTTCGCCCCTATGGTACTaGAAGGGTCTCTGGGTGCTACCAAAGGAGAAAGGTAAACACAAA | + |
|
Preference number: 1 (lower is better) Translates to: RSGSGAYLELSPLWY*KGLWVLPKEKGKHK Trigger: TTTGTGTTTACCTTTCTCCTTTGGTAGCACCCAGAGACCCTTCCAGTACCATAGGGGCGAAAGCTCTAGGTAGGCACCAGATCCACTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194797.2 |
||
| 3UTR TCA 90 bp | GCCAGACATCACAGCTTCAAAGAGGACCTGTGCTTCCTTTTCCTCTaGATCACCATCATCTCTCACTGTACTTGCTTTGGAAGGTGGGCA | + |
|
Preference number: 1 (lower is better) Translates to: ARHHSFKEDLCFLFL*ITIISHCTCFGRWA Trigger: TGCCCACCTTCCAAAGCAAGTACAGTGAGAGATGATGGTGATTCAGAGGAAAAGGAAGCACAGGTCCTCTTTGAAGCTGTGATGTCTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR GCA 90 bp | TTTATTTTATGGGTCATTGTAAAGGGAAGCCAGGGCAGGAACTCATaGAAGCTGGGAACCAGGAAGCAGGAACTGCATCAGGAATGCCTG | + |
|
Preference number: 1 (lower is better) Translates to: FILWVIVKGSQGRNS*KLGTRKQELHQECL Trigger: CAGGCATTCCTGATGCAGTTCCTGCTTCCTGGTTCCCAGCTTGCATGAGTTCCTGCCCTGGCTTCCCTTTACAATGACCCATAAAATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194797.2 |
||
| 3UTR CCA 90 bp | CGTCTTCTGGCTCTCTGCTATCTCTGTGTGAACAAGACTGACATCTaGCCAGAGAGTCTGCTCCACTTCCAGCAGAATTTAAACAGCCAT | + |
|
Preference number: 1 (lower is better) Translates to: RLLALCYLCVNKTDI*PESLLHFQQNLNSH Trigger: ATGGCTGTTTAAATTCTGCTGGAAGTGGAGCAGACTCTCTGGCCAGATGTCAGTCTTGTTCACACAGAGATAGCAGAGAGCCAGAAGACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR CCA 90 bp | AGGATGACACTCTTGAAGAACAAGACTGAGACTCTGAGCCAGGAATaGTGCTGTTTGCCTTTCATTCCAGCAGAGACAAGAGGATCTCTG | + |
|
Preference number: 1 (lower is better) Translates to: RMTLLKNKTETLSQE*CCLPFIPAETRGSL Trigger: CAGAGATCCTCTTGTCTCTGCTGGAATGAAAGGCAAACAGCACCATTCCTGGCTCAGAGTCTCAGTCTTGTTCTTCAAGAGTGTCATCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR GCA 90 bp | ACCAACCAAGGCCCACCCCATAAGATGGAAGCCATACCCAAACACTaGATAGATGGCCAAGAATTTGAGACCAAATATGTCAGACTCCTA | + |
|
Preference number: 1 (lower is better) Translates to: TNQGPPHKMEAIPKH*IDGQEFETKYVRLL Trigger: TAGGAGTCTGACATATTTGGTCTCAAATTCTTGGCCATCTATGCAGTGTTTGGGTATGGCTTCCATCTTATGGGGTGGGCCTTGGTTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194797.2 |
||
| 3UTR TCA 90 bp | AAAGGTAAACACAAACCCAGCTACAAACCCTTTGATCTACATTCCTaGCCTGCCTGCAAGATATGCAGGTGCCATAGTGGCACACAGATT | + |
|
Preference number: 1 (lower is better) Translates to: KGKHKPSYKPFDLHS*PACKICRCHSGTQI Trigger: AATCTGTGTGCCACTATGGCACCTGCATATCTTGCAGGCAGGTCAGGAATGTAGATCAAAGGGTTTGTAGCTGGGTTTGTGTTTACCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194797.2 |
||
| 3UTR GCA 90 bp | GGATCCAGAGATCTGTTTGAACTGCACCATCTAATTTCACTTCTTTaGACTTTCCCTTGTGAACAACCGGTCAGAAACAACGATGTGGGG | + |
|
Preference number: 1 (lower is better) Translates to: GSRDLFELHHLISLL*TFPCEQPVRNNDVG Trigger: CCCCACATCGTTGTTTCTGACCGGTTGTTCACAAGGGAAAGTGCAAAGAAGTGAAATTAGATGGTGCAGTTCAAACAGATCTCTGGATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR GCA 90 bp | TATAGATCAGTGCCTTATTCAGTCATCTTCAGAGAAGCTTCCTCCTaGAGAAGATGGGAACAAACACAGAGACCCACAGCCAAGCAATGT | + |
|
Preference number: 1 (lower is better) Translates to: YRSVPYSVIFREASS*RRWEQTQRPTAKQC Trigger: ACATTGCTTGGCTGTGGGTCTCTGTGTTTGTTCCCATCTTCTGCAGGAGGAAGCTTCTCTGAAGATGACTGAATAAGGCACTGATCTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194797.2 |
||
| 3UTR TCA 90 bp | CTTGACTCCACTCCCAGTAACTGCCTCAAGACCACAGACTCTTTTTaGATATACTCATTACTTGGCACGTGCTTTAAGATGTGCTCTGTC | + |
|
Preference number: 1 (lower is better) Translates to: LDSTPSNCLKTTDSF*IYSLLGTCFKMCSV Trigger: GACAGAGCACATCTTAAAGCACGTGCCAAGTAATGAGTATATTCAAAAAGAGTCTGTGGTCTTGAGGCAGTTACTGGGAGTGGAGTCAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR-3UTR GCA 90 bp | GGTGATCAGGGGTTCCTGCCTCTGTGGGAGAACTGCCAGCCAGCTCACAGCCAGATCTCTCACTGTACTTaGTTTGGAAGGTGGGCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: GDQGFLPLWENCQPAHSQISHCT*FGRWAG Trigger: CCCTGCCCACCTTCCAAAGCAAGTACAGTGAGAGAT...CTGGCTGTGAGCTGGCTGGCAGTTCTCCCACAGAGGCAGGAACCCCTGATCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR-3UTR TCA 90 bp | CTGGCTCTCTGCTATCTCTGTGTGAACAAGACTGACATCTGGCCAGAGAGTCTGAACAACGATGTGGGGTaGTCAGGGGTTCCTGCCTCT | + |
|
Preference number: 2 (lower is better) Translates to: LALCYLCVNKTDIWPESLNNDVG*SGVPAS Trigger: AGAGGCAGGAACCCCTGATCACCCCACATCGTTGTT...CAGACTCTCTGGCCAGATGTCAGTCTTGTTCACACAGAGATAGCAGAGAGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR-3UTR CCA 90 bp | GCAGGAACTGCATCAGGAATGCCTGCTGCTGAGGCTATAGGTTGCTCTCTACAATCGCCCCTATGGTACTaGAAGGGTCTCTGGGTGCTA | + |
|
Preference number: 2 (lower is better) Translates to: AGTASGMPAAEAIGCSLQSPLWY*KGLWVL Trigger: TAGCACCCAGAGACCCTTCCAGTACCATAGGGGCGA...TTGTAGAGAGCAACCTATAGCCTCAGCAGCAGGCATTCCTGATGCAGTTCCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194797.2 |
||
| 3UTR-3UTR GCA 90 bp | AAGTCCACCTGCCTCTGCCTCCTGGATGCTGGAATTGAAGACATGTGCCAGCACCTGAGCCAGGAATGGTaGTGTTTGCCTTTCATTCCA | + |
|
Preference number: 2 (lower is better) Translates to: KSTCLCLLDAGIEDMCQHLSQEW*CLPFIP Trigger: TGGAATGAAAGGCAAACAGCACCATTCCTGGCTCAG...GTGCTGGCACATGTCTTCAATTCCAGCATCCAGGAGGCAGAGGCAGGTGGACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR-3UTR GCA 90 bp | CCTCCAACTCACAGAAGTCCACCTGCCTCTGCCTCCTGGATGCTGGAATTGAAGAGAAGCTTATCAGTTTaGTCCAGGCAAAGGACTGGC | + |
|
Preference number: 2 (lower is better) Translates to: PPTHRSPPASASWMLELKRSLSV*SRQRTG Trigger: GCCAGTCCTTTGCCTGGAGCAAACTGATAAGCTTCT...CTTCAATTCCAGCATCCAGGAGGCAGAGGCAGGTGGACTTCTGTGAGTTGGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR-3UTR CCA 90 bp | CTGGCTCTCTGCTATCTCTGTGTGAACAAGACTGACATCTGGCCAGAGAGTCTGGAACTTGGATACCTATaGTGTGAGCCCTTTCTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: LALCYLCVNKTDIWPESLELGYL*CEPFLQ Trigger: CTGGAGAAAGGGCTCACACCATAGGTATCCAAGTTC...CAGACTCTCTGGCCAGATGTCAGTCTTGTTCACACAGAGATAGCAGAGAGCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR-3UTR TCA 90 bp | TCTCTTCAGCCTAAAAGCTGGTCCACAGACACATACAGACTCAGCATCCTTCAAGTCAATGATGCTGCATaGCACAGGATGAGGCCACTG | + |
|
Preference number: 2 (lower is better) Translates to: SLQPKSWSTDTYRLSILQVNDAA*HRMRPL Trigger: CAGTGGCCTCATCCTGTGTCATGCAGCATCATTGAC...TTGAAGGATGCTGAGTCTGTATGTGTCTGTGGACCAGCTTTTAGGCTGAAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR-3UTR TCA 90 bp | TCTCTGCTTACCAATCACCTTGACTCCACTCCCAGTAACTGCCTCAAGACCACAGATGTACACACTGGGTaGTTCTTGGATCCAGAGATC | + |
|
Preference number: 2 (lower is better) Translates to: SLLTNHLDSTPSNCLKTTDVHTG*FLDPEI Trigger: GATCTCTGGATCCAAGAATCACCCAGTGTGTACATC...TGTGGTCTTGAGGCAGTTACTGGGAGTGGAGTCAAGGTGATTGGTAAGCAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR CAA 90 bp | GCTTCCTTTTCCTCTGAATCACCATCATCTCTCACTGTACTTGCTTaGGAAGGTGGGCAGGGTCTAGAATACAGGCATCCCATAATGGTC | + |
|
Preference number: 2 (lower is better) Translates to: ASFSSESPSSLTVLA*EGGQGLEYRHPIMV Trigger: GACCATTATGGGATGCCTGTATTCTAGACCCTGCCCACCTTCCAAAGCAAGTACAGTGAGAGATGATGGTGATTCAGAGGAAAAGGAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR-3UTR TCA 90 bp | GCCAAGCAATGTGTCGAGAGCAAGACAGCAGAAAACACTCAGCTCAAATTCGGTCAGAGGGAATTCCCTTaGGTCTTGTGGTCTATGTTC | + |
|
Preference number: 2 (lower is better) Translates to: AKQCVESKTAENTQLKFGQREFP*VLWSMF Trigger: GAACATAGACCACAAGACTCAAGGGAATTCCCTCTG...ACCGAATTTGAGCTGAGTGTTTTCTGCTGTCTTGCTCTCGACACATTGCTTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194797.2 |
||
| 3UTR-3UTR CCA 90 bp | GCACCACCCAGCTTCTCCATCATCTCTTATTGTCTCTGCTTACCAATCACCTTGACTTGCTTTGGAAGGTaGGCAGGGTCTAGAATACAG | + |
|
Preference number: 2 (lower is better) Translates to: APPSFSIISYCLCLPITLTCFGR*AGSRIQ Trigger: CTGTATTCTAGACCCTGCCCACCTTCCAAAGCAAGT...CAAGGTGATTGGTAAGCAGAGACAATAAGAGATGATGGAGAAGCTGGGTGGTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR-3UTR CCA 90 bp | ATCACCTTGACTCCACTCCCAGTAACTGCCTCAAGACCACAGACTCTTTTTGAAACTGATGCTGGCATTTaGAAGGCACAAGCAGGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: ITLTPLPVTASRPQTLFETDAGI*KAQAGG Trigger: TCCACCTGCTTGTGCCTTCCAAATGCCAGCATCAGT...TTCAAAAAGAGTCTGTGGTCTTGAGGCAGTTACTGGGAGTGGAGTCAAGGTGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR CAA 90 bp | CCCAGCTTCTCCATCATCTCTTATTGTCTCTGCTTACCAATCACCTaGACTCCACTCCCAGTAACTGCCTCAAGACCACAGACTCTTTTT | + |
|
Preference number: 2 (lower is better) Translates to: PSFSIISYCLCLPIT*TPLPVTASRPQTLF Trigger: AAAAAGAGTCTGTGGTCTTGAGGCAGTTACTGGGAGTGGAGTCAAGGTGATTGGTAAGCAGAGACAATAAGAGATGATGGAGAAGCTGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR CAA 90 bp | TGCTACCAAAGGAGAAAGGTAAACACAAACCCAGCTACAAACCCTTaGATCTACATTCCTGACCTGCCTGCAAGATATGCAGGTGCCATA | + |
|
Preference number: 2 (lower is better) Translates to: CYQRRKVNTNPATNP*IYIPDLPARYAGAI Trigger: TATGGCACCTGCATATCTTGCAGGCAGGTCAGGAATGTAGATCAAAGGGTTTGTAGCTGGGTTTGTGTTTACCTTTCTCCTTTGGTAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194797.2 |
||
| 3UTR-3UTR TCA 90 bp | ATCACCTTGACTCCACTCCCAGTAACTGCCTCAAGACCACAGACTCTTTTTGAAATGGTATGCAGTAGTTaGCTGCCTCATCTTCAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: ITLTPLPVTASRPQTLFEMVCSS*LPHLQQ Trigger: TTGCTGAAGATGAGGCAGTCAACTACTGCATACCAT...TTCAAAAAGAGTCTGTGGTCTTGAGGCAGTTACTGGGAGTGGAGTCAAGGTGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR-3UTR TCA 90 bp | TCTCTGCTTACCAATCACCTTGACTCCACTCCCAGTAACTGCCTCAAGACCACAAAAACACTTTTGGAGTaGGTCCTCTCTCAGTTCATA | + |
|
Preference number: 2 (lower is better) Translates to: SLLTNHLDSTPSNCLKTTKTLLE*VLSQFI Trigger: TATGAACTGAGAGAGGACTCACTCCAAAAGTGTTTT...TGTGGTCTTGAGGCAGTTACTGGGAGTGGAGTCAAGGTGATTGGTAAGCAGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR-3UTR TCA 90 bp | CTGGCTCTCTGCTATCTCTGTGTGAACAAGACTGACATCTGGCCAGAGAGTCTGGTGAATATTAATCAGTaGCCCATACACACTGAGTAT | + |
|
Preference number: 2 (lower is better) Translates to: LALCYLCVNKTDIWPESLVNINQ*PIHTEY Trigger: ATACTCAGTGTGTATGGGTCACTGATTAATATTCAC...CAGACTCTCTGGCCAGATGTCAGTCTTGTTCACACAGAGATAGCAGAGAGCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR-3UTR GCA 90 bp | ATCACCTTGACTCCACTCCCAGTAACTGCCTCAAGACCACAGACTCTTTTTGAAAGGAATGGTGCTGTTTaGCTTTCATTCCAGCAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: ITLTPLPVTASRPQTLFERNGAV*LSFQQR Trigger: TCTCTGCTGGAATGAAAGGCAAACAGCACCATTCCT...TTCAAAAAGAGTCTGTGGTCTTGAGGCAGTTACTGGGAGTGGAGTCAAGGTGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR-3UTR GCA 90 bp | CCCTATGGTACTGGAAGGGTCTCTGGGTGCTACCAAAGGAGAAAGGTAAACACAATGGTTATAGATCAGTaGCTTATTCAGTCATCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: PYGTGRVSGCYQRRKVNTMVIDQ*LIQSSS Trigger: TGAAGATGACTGAATAAGGCACTGATCTATAACCAT...TGTGTTTACCTTTCTCCTTTGGTAGCACCCAGAGACCCTTCCAGTACCATAGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194797.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTATTTTTCTGGGGTTAGGGATTGAGACAGGGTTTCTCTGTGCAGCATTATCTCTTCAGCCTAGAAGCTaGTCCACAGACACATACAGA | + |
|
Preference number: 2 (lower is better) Translates to: FIFLGLGIETGFLCAALSLQPRS*STDTYR Trigger: TCTGTATGTGTCTGTGGACCAGCTTCTAGGCTGAAG...AGATAATGCTGCACAGAGAAACCCTGTCTCAATCCCTAACCCCAGAAAAATAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR-3UTR CCA 90 bp | TTTATTTTTCTGGGGTTAGGGATTGAGACAGGGTTTCTCTGTGCAGCATTATCTCTTCAGGGTATATCATaGGAAACACTTCTCAGAACT | + |
|
Preference number: 2 (lower is better) Translates to: FIFLGLGIETGFLCAALSLQGIS*ETLLRT Trigger: AGTTCTGAGAAGTGTTTCCCATGATATACCCTGAAG...AGATAATGCTGCACAGAGAAACCCTGTCTCAATCCCTAACCCCAGAAAAATAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR GCA 72 bp | GGTCAGAAACAACGATGTGGGGTGATCAGGGGTTCCTaGCTCTGTGGGAGAACTGCCAGCCAGCTCACAGCC | + |
|
Preference number: 3 (lower is better) Translates to: GQKQRCGVIRGS*LCGRTASQLTA Trigger: GGCTGTGAGCTGGCTGGCAGTTCTCCCACAGAGGCAGGAACCCCTGATCACCCCACATCGTTGTTTCTGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR GCA 72 bp | TGGGGTGATCAGGGGTTCCTGCCTCTGTGGGAGAACTaGCAGCCAGCTCACAGCCAGACATCACAGCTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: WGDQGFLPLWEN*QPAHSQTSQLQ Trigger: TTGAAGCTGTGATGTCTGGCTGTGAGCTGGCTGGCAGTTCTCCCACAGAGGCAGGAACCCCTGATCACCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR CCA 72 bp | ACAACGATGTGGGGTGATCAGGGGTTCCTGCCTCTGTaGGAGAACTGCCAGCCAGCTCACAGCCAGACATCA | + |
|
Preference number: 3 (lower is better) Translates to: TTMWGDQGFLPL*ENCQPAHSQTS Trigger: TGATGTCTGGCTGTGAGCTGGCTGGCAGTTCTCCCACAGAGGCAGGAACCCCTGATCACCCCACATCGTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR CCA 72 bp | CCTCCAACTCACAGAAGTCCACCTGCCTCTGCCTCCTaGATGCTGGAATTGAAGACATGTGCCAGCACCACC | + |
|
Preference number: 3 (lower is better) Translates to: PPTHRSPPASAS*MLELKTCASTT Trigger: GGTGGTGCTGGCACATGTCTTCAATTCCAGCATCCAGGAGGCAGAGGCAGGTGGACTTCTGTGAGTTGGAGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR CCA 72 bp | AGTGGATCTGGTGCCTACCTAGAGCTTTCGCCCCTATaGTACTGGAAGGGTCTCTGGGTGCTACCAAAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: SGSGAYLELSPL*YWKGLWVLPKE Trigger: CTCCTTTGGTAGCACCCAGAGACCCTTCCAGTACCATAGGGGCGAAAGCTCTAGGTAGGCACCAGATCCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194797.2 |
||
| 3UTR CCA 72 bp | TCTGGTGCCTACCTAGAGCTTTCGCCCCTATGGTACTaGAAGGGTCTCTGGGTGCTACCAAAGGAGAAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: SGAYLELSPLWY*KGLWVLPKEKG Trigger: ACCTTTCTCCTTTGGTAGCACCCAGAGACCCTTCCAGTACCATAGGGGCGAAAGCTCTAGGTAGGCACCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194797.2 |
||
| 3UTR-3UTR CAA 90 bp | GCACCACCCAGCTTCTCCATCATCTCTTATTGTCTCTGCTTACCAATCACCTTGCATCCCATAATGGTCTaGGAGGTGGTGGGGTGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: APPSFSIISYCLCLPITLHPIMV*EVVGWW Trigger: CCACCACCCCACCACCTCCAAGACCATTATGGGATG...CAAGGTGATTGGTAAGCAGAGACAATAAGAGATGATGGAGAAGCTGGGTGGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR TCA 72 bp | TCTTCTGGCTCTCTGCTATCTCTGTGTGAACAAGACTaGCATCTGGCCAGAGAGTCTGCTCCACTTCCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: SSGSLLSLCEQD*HLARESAPLPA Trigger: TGCTGGAAGTGGAGCAGACTCTCTGGCCAGATGTCAGTCTTGTTCACACAGAGATAGCAGAGAGCCAGAAGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR GCA 72 bp | CAGGTGGATCACTCTAGGCTTGAGGCCAGTCTGGTCTaGATAGTGAGTTTCAGACCATCCAGAGCTATACAG | + |
|
Preference number: 3 (lower is better) Translates to: QVDHSRLEASLV*IVSFRPSRAIQ Trigger: CTGTATAGCTCTGGATGGTCTGAAACTCACTATGCAGACCAGACTGGCCTCAAGCCTAGAGTGATCCACCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR GCA 72 bp | AGCTTTCGCCCCTATGGTACTGGAAGGGTCTCTGGGTaGTACCAAAGGAGAAAGGTAAACACAAACCCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: SFRPYGTGRVSG*YQRRKVNTNPA Trigger: AGCTGGGTTTGTGTTTACCTTTCTCCTTTGGTAGCACCCAGAGACCCTTCCAGTACCATAGGGGCGAAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194797.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTGGGCAGGGTCTAGAATACAGGCATCCCATAATGGTCTTGGAGGTGGTGGGGGGTTTAAAGTCATTCTaGGCTACTCAGCAAATTCAG | + |
|
Preference number: 3 (lower is better) Translates to: GGQGLEYRHPIMVLEVVGGLKSF*ATQQIQ Trigger: CTGAATTTGCTGAGTAGCCAAGAATGACTTTAAACC...CCCCACCACCTCCAAGACCATTATGGGATGCCTGTATTCTAGACCCTGCCCACC 50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR CCA 72 bp | AGCCTACACAGATCATTGAACATGGAGAAGTGGATCTaGTGCCTACCTAGAGCTTTCGCCCCTATGGTACTG | + |
|
Preference number: 3 (lower is better) Translates to: SLHRSLNMEKWI*CLPRAFAPMVL Trigger: CAGTACCATAGGGGCGAAAGCTCTAGGTAGGCACCAGATCCACTTCTCCATGTTCAATGATCTGTGTAGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194797.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGGTGCTGTTTGCCTTTCATTCCAGCAGAGACAAGAGGATCTCTGTGAGTTTGCATCTCTCACTGTACTaGCTTTGGAAGGTGGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: MVLFAFHSSRDKRISVSLHLSLY*LWKVGR Trigger: CCTGCCCACCTTCCAAAGCAAGTACAGTGAGAGATG...CAAACTCACAGAGATCCTCTTGTCTCTGCTGGAATGAAAGGCAAACAGCACCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR GCA 72 bp | GCACCACCCAGCTTCTCCATCATCTCTTATTGTCTCTaGTTACCAATCACCTTGACTCCACTCCCAGTAACT | + |
|
Preference number: 3 (lower is better) Translates to: APPSFSIISYCL*LPITLTPLPVT Trigger: AGTTACTGGGAGTGGAGTCAAGGTGATTGGTAAGCAGAGACAATAAGAGATGATGGAGAAGCTGGGTGGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR CCA 72 bp | GCTCTCTGCTATCTCTGTGTGAACAAGACTGACATCTaGCCAGAGAGTCTGCTCCACTTCCAGCAGAATTTA | + |
|
Preference number: 3 (lower is better) Translates to: ALCYLCVNKTDI*PESLLHFQQNL Trigger: TAAATTCTGCTGGAAGTGGAGCAGACTCTCTGGCCAGATGTCAGTCTTGTTCACACAGAGATAGCAGAGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR-3UTR CAA 90 bp | TTTATTTTTCTGGGGTTAGGGATTGAGACAGGGTTTCTCTGTGCAGCATTATCTTGGATCACTCTAGGCTaGAGGCCAGTCTGGTCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: FIFLGLGIETGFLCAALSWITLG*RPVWSA Trigger: TGCAGACCAGACTGGCCTCAAGCCTAGAGTGATCCA...AGATAATGCTGCACAGAGAAACCCTGTCTCAATCCCTAACCCCAGAAAAATAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR TCA 72 bp | TTAAGCATCCTTCAGTGTGCTTCCTTCCAAAGTCAATaGTGCTGCATGACACAGGATGAGGCCACTGCTAAC | + |
|
Preference number: 3 (lower is better) Translates to: LSILQCASFQSQ*CCMTQDEATAN Trigger: GTTAGCAGTGGCCTCATCCTGTGTCATGCAGCATCATTGACTTTGGAAGGAAGCACACTGAAGGATGCTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR GCA 72 bp | TTGAAGAACAAGACTGAGACTCTGAGCCAGGAATGGTaGTGTTTGCCTTTCATTCCAGCAGAGACAAGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LKNKTETLSQEW*CLPFIPAETRG Trigger: TCCTCTTGTCTCTGCTGGAATGAAAGGCAAACAGCACCATTCCTGGCTCAGAGTCTCAGTCTTGTTCTTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR GCA 72 bp | GGCCCACCCCATAAGATGGAAGCCATACCCAAACACTaGATAGATGGCCAAGAATTTGAGACCAAATATGTC | + |
|
Preference number: 3 (lower is better) Translates to: GPPHKMEAIPKH*IDGQEFETKYV Trigger: GACATATTTGGTCTCAAATTCTTGGCCATCTATGCAGTGTTTGGGTATGGCTTCCATCTTATGGGGTGGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194797.2 |
||
| 3UTR CCA 72 bp | ATCACCATCATCTCTCACTGTACTTGCTTTGGAAGGTaGGCAGGGTCTAGAATACAGGCATCCCATAATGGT | + |
|
Preference number: 3 (lower is better) Translates to: ITIISHCTCFGR*AGSRIQASHNG Trigger: ACCATTATGGGATGCCTGTATTCTAGACCCTGCCCACCTTCCAAAGCAAGTACAGTGAGAGATGATGGTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR CCA 72 bp | GGAAACACTTCTCAGAACTCTGAACTTGGATACCTATaGTGTGAGCCCTTTCTCCAGATGTATCACAGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: GNTSQNSELGYL*CEPFLQMYHRD Trigger: GTCCCTGTGATACATCTGGAGAAAGGGCTCACACCATAGGTATCCAAGTTCAGAGTTCTGAGAAGTGTTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR TCA 72 bp | CACAGCTTCAAAGAGGACCTGTGCTTCCTTTTCCTCTaGATCACCATCATCTCTCACTGTACTTGCTTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: HSFKEDLCFLFL*ITIISHCTCFG Trigger: TCCAAAGCAAGTACAGTGAGAGATGATGGTGATTCAGAGGAAAAGGAAGCACAGGTCCTCTTTGAAGCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR TCA 72 bp | GCACCATCTAATTTCACTTCTTTGCACTTTCCCTTGTaGACAACCGGTCAGAAACAACGATGTGGGGTGATC | + |
|
Preference number: 3 (lower is better) Translates to: APSNFTSLHFPL*TTGQKQRCGVI Trigger: GATCACCCCACATCGTTGTTTCTGACCGGTTGTTCACAAGGGAAAGTGCAAAGAAGTGAAATTAGATGGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR TCA 72 bp | AAGACCCTAGATGAAGACAAAGCCTACACAGATCATTaGACATGGAGAAGTGGATCTGGTGCCTACCTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: KTLDEDKAYTDH*TWRSGSGAYLE Trigger: CTCTAGGTAGGCACCAGATCCACTTCTCCATGTTCAATGATCTGTGTAGGCTTTGTCTTCATCTAGGGTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194797.2 |
||
| 3UTR GCA 72 bp | ACTGCATCAGGAATGCCTGCTGCTGAGGCTATAGGTTaGTCTCTACAAACTAACAGTAAGACCCTAGATGAA | + |
|
Preference number: 3 (lower is better) Translates to: TASGMPAAEAIG*SLQTNSKTLDE Trigger: TTCATCTAGGGTCTTACTGTTAGTTTGTAGAGAGCAACCTATAGCCTCAGCAGCAGGCATTCCTGATGCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194797.2 |
||
| 3UTR TCA 72 bp | TTAACCACCTCTTATCAGGATGATGTACACACTGGGTaGTTCTTGGATCCAGAGATCTGTTTGAACTGCACC | + |
|
Preference number: 3 (lower is better) Translates to: LTTSYQDDVHTG*FLDPEICLNCT Trigger: GGTGCAGTTCAAACAGATCTCTGGATCCAAGAATCACCCAGTGTGTACATCATCCTGATAAGAGGTGGTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR CCA 72 bp | TCTGTGATAGGACTTTGTAAGCCAACCATCATACTGTaGGCAACACTGGTGTTAACCACCTCTTATCAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: SVIGLCKPTIIL*ATLVLTTSYQD Trigger: ATCCTGATAAGAGGTGGTTAACACCAGTGTTGCCCACAGTATGATGGTTGGCTTACAAAGTCCTATCACAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR CCA 72 bp | GGGACCACTGCTCGGGATTCTAGATTTGGAAGGCTATaGTTTCTGAGAGATGTCTACAAAGAAGACAAAATC | + |
|
Preference number: 3 (lower is better) Translates to: GTTARDSRFGRL*FLRDVYKEDKI Trigger: GATTTTGTCTTCTTTGTAGACATCTCTCAGAAACCATAGCCTTCCAAATCTAGAATCCCGAGCAGTGGTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR CCA 72 bp | ACCACGAATAAACTACATCATCTCCAGCCTAGAAGCTaGTCCACAGACATATACAGACTCAGCATTCTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: TTNKLHHLQPRS*STDIYRLSILQ Trigger: TTGAAGAATGCTGAGTCTGTATATGTCTGTGGACCAGCTTCTAGGCTGGAGATGATGTAGTTTATTCGTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR CCA 72 bp | AATGTTAATAAACTACATTCTCTCCAGCCTAGAAGCTaGTCTACGGACACATACGGACTTAAGCATCCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: NVNKLHSLQPRS*STDTYGLKHPS Trigger: TGAAGGATGCTTAAGTCCGTATGTGTCCGTAGACCAGCTTCTAGGCTGGAGAGAATGTAGTTTATTAACATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR CCA 72 bp | AATCAACTATTTGAGCCCTTCCTTCAGGGTATATCATaGGAAACACTTCTCAGAACTCTGAACTTGGATACC | + |
|
Preference number: 3 (lower is better) Translates to: NQLFEPFLQGIS*ETLLRTLNLDT Trigger: GGTATCCAAGTTCAGAGTTCTGAGAAGTGTTTCCCATGATATACCCTGAAGGAAGGGCTCAAATAGTTGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR CCA 72 bp | AATGTTAATAAACTACATTCTCTTCAGCCTAGAAGCTaGTCCACAGACACATACAGACTCAGCATCCTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: NVNKLHSLQPRS*STDTYRLSILQ Trigger: TTGAAGGATGCTGAGTCTGTATGTGTCTGTGGACCAGCTTCTAGGCTGAAGAGAATGTAGTTTATTAACATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| CDS-3UTR TCA 90 bp | GGTGGGCAGGGTCTAGAATACAGGCATCCCATAATGGTCTTGGAGGTGGTGGGGAGCCTGGCAGGGTTGTaGGCTTTGAGCCATGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GGQGLEYRHPIMVLEVVGSLAGL*ALSHGF Trigger: AAACCCATGGCTCAAAGCTCACAACCCTGCCAGGCT...CCCCACCACCTCCAAGACCATTATGGGATGCCTGTATTCTAGACCCTGCCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| CDS-3UTR CCA 90 bp | GGTGATCAGGGGTTCCTGCCTCTGTGGGAGAACTGCCAGCCAGCTCACAGCCAGCTTTTGTCTGTATGTTaGAAGGCCTCAGCTGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: GDQGFLPLWENCQPAHSQLLSVC*KASAGQ Trigger: CTGTCCAGCTGAGGCCTTCCAACATACAGACAAAAG...CTGGCTGTGAGCTGGCTGGCAGTTCTCCCACAGAGGCAGGAACCCCTGATCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| CDS-3UTR CCA 90 bp | CTGGCTCTCTGCTATCTCTGTGTGAACAAGACTGACATCTGGCCAGAGAGTCTGGTCCAGGGCTTCCACTaGGCCTTCAGGTTAGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LALCYLCVNKTDIWPESLVQGFH*AFRLGV Trigger: GACCCCTAACCTGAAGGCCCAGTGGAAGCCCTGGAC...CAGACTCTCTGGCCAGATGTCAGTCTTGTTCACACAGAGATAGCAGAGAGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| CDS-3UTR CCA 90 bp | AAGTCCACCTGCCTCTGCCTCCTGGATGCTGGAATTGAAGACATGTGCCAGCACCTGCTGGCGTCAATCTaGTTCTCCCAGTGGGTACTA | + |
|
Preference number: 4 (lower is better) Translates to: KSTCLCLLDAGIEDMCQHLLASI*FSQWVL Trigger: TAGTACCCACTGGGAGAACCAGATTGACGCCAGCAG...GTGCTGGCACATGTCTTCAATTCCAGCATCCAGGAGGCAGAGGCAGGTGGACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| CDS-3UTR CCA 90 bp | GCAGGAACTGCATCAGGAATGCCTGCTGCTGAGGCTATAGGTTGCTCTCTACAAATGTGTGCAGGCTGCTaGCGTCAATCTGGTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: AGTASGMPAAEAIGCSLQMCAGC*RQSGSP Trigger: GGGAGAACCAGATTGACGCCAGCAGCCTGCACACAT...TTGTAGAGAGCAACCTATAGCCTCAGCAGCAGGCATTCCTGATGCAGTTCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194797.2 |
||
| CDS-3UTR TCA 90 bp | GGTGATCAGGGGTTCCTGCCTCTGTGGGAGAACTGCCAGCCAGCTCACAGCCAGACTAAAAGATACATTTaGCCAACTGGGACCATCATT | + |
|
Preference number: 4 (lower is better) Translates to: GDQGFLPLWENCQPAHSQTKRYI*PTGTII Trigger: AATGATGGTCCCAGTTGGTCAAATGTATCTTTTAGT...CTGGCTGTGAGCTGGCTGGCAGTTCTCCCACAGAGGCAGGAACCCCTGATCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| CDS-3UTR CCA 90 bp | TCTCACTGTACTTGCTTTGGAAGGTGGGCAGGGTCTAGAATACAGGCATCCCATATGTGTGCAGGCTGCTaGCGTCAATCTGGTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SHCTCFGRWAGSRIQASHMCAGC*RQSGSP Trigger: GGGAGAACCAGATTGACGCCAGCAGCCTGCACACAT...ATGGGATGCCTGTATTCTAGACCCTGCCCACCTTCCAAAGCAAGTACAGTGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| CDS-3UTR TCA 90 bp | GCAGGAACTGCATCAGGAATGCCTGCTGCTGAGGCTATAGGTTGCTCTCTACAATTCGAAGGGACACTTTaGCAGCCATGGGTGAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: AGTASGMPAAEAIGCSLQFEGTL*QPWVKF Trigger: GAACTTCACCCATGGCTGTCAAAGTGTCCCTTCGAA...TTGTAGAGAGCAACCTATAGCCTCAGCAGCAGGCATTCCTGATGCAGTTCCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194797.2 |
||
| CDS-3UTR GCA 90 bp | TCTCACTGTACTTGCTTTGGAAGGTGGGCAGGGTCTAGAATACAGGCATCCCATTTGCAGGTGTATGTGTaGAGGCTGCTGGCGTCAATC | + |
|
Preference number: 4 (lower is better) Translates to: SHCTCFGRWAGSRIQASHLQVYV*RLLASI Trigger: GATTGACGCCAGCAGCCTGCACACATACACCTGCAA...ATGGGATGCCTGTATTCTAGACCCTGCCCACCTTCCAAAGCAAGTACAGTGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| CDS-3UTR GCA 90 bp | GACCAAAGGTTTAAAGTCATTCTTGGCTACTCAGCAAATTCAGGCCATGCCAAGAGTTCTCCAGCTCTCTaGGGCTCAGCCTGGCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: DQRFKVILGYSANSGHAKSSPAL*GSAWQG Trigger: ACCCTGCCAGGCTGAGCCGCAGAGAGCTGGAGAACT...CTTGGCATGGCCTGAATTTGCTGAGTAGCCAAGAATGACTTTAAACCTTTGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| CDS-3UTR CCA 90 bp | TGCCTTATTCAGTCATCTTCAGAGAAGCTTCCTCCTGCAGAAGATGGGAACAAAGTCCAGGGCTTCCACTaGGCCTTCAGGTTAGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: CLIQSSSEKLPPAEDGNKVQGFH*AFRLGV Trigger: GACCCCTAACCTGAAGGCCCAGTGGAAGCCCTGGAC...TTTGTTCCCATCTTCTGCAGGAGGAAGCTTCTCTGAAGATGACTGAATAAGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194797.2 |
||
| CDS-3UTR CCA 90 bp | CCAATCCCTCTCCTCAGGACTCAGGCAACCAGTCAAAATACAATGTTGACCTCTGTGAAGTTCAGGGTGTaGTTTGCCCAGCTGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PIPLLRTQATSQNTMLTSVKFRV*FAQLAL Trigger: CAGAGCCAGCTGGGCAAACCACACCCTGAACTTCAC...AGAGGTCAACATTGTATTTTGACTGGTTGCCTGAGTCCTGAGGAGAGGGATTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194797.2 |
||
| CDS-3UTR CCA 90 bp | GGTGGGCAGGGTCTAGAATACAGGCATCCCATAATGGTCTTGGAGGTGGTGGGGGACTTCCTGGAAGGCTaGACTACTGAATATACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GGQGLEYRHPIMVLEVVGDFLEG*TTEYTV Trigger: TACAGTATATTCAGTAGTCCAGCCTTCCAGGAAGTC...CCCCACCACCTCCAAGACCATTATGGGATGCCTGTATTCTAGACCCTGCCCACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| CDS-3UTR TCA 90 bp | GCACCACCCAGCTTCTCCATCATCTCTTATTGTCTCTGCTTACCAATCACCTTGCAGGGTTGTGAGCTTTaGGCCATGGGTTTCCAACCT | + |
|
Preference number: 4 (lower is better) Translates to: APPSFSIISYCLCLPITLQGCEL*AMGFQP Trigger: AGGTTGGAAACCCATGGCTCAAAGCTCACAACCCTG...CAAGGTGATTGGTAAGCAGAGACAATAAGAGATGATGGAGAAGCTGGGTGGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| CDS-3UTR GCA 90 bp | AAGTCATTCTTGGCTACTCAGCAAATTCAGGCCATGCCAAGCTATGTCAGATCCTCTCCAGGGAAAGTCTaGTGTGGCAACTGCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KSFLATQQIQAMPSYVRSSPGKV*CGNCSS Trigger: GCTGGAGCAGTTGCCACAGCAGACTTTCCCTGGAGA...GGATCTGACATAGCTTGGCATGGCCTGAATTTGCTGAGTAGCCAAGAATGACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| CDS-3UTR CCA 90 bp | GCAACCAGTCAAAATACAATGTTGACCTCTGTGCCACCCACACACAGAGGGAATTTGGAAGGCCTCAGCTaGACAGGCTTTCCTGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: ATSQNTMLTSVPPTHRGNLEGLS*TGFPET Trigger: TGTCTCAGGAAAGCCTGTCCAGCTGAGGCCTTCCAA...ATTCCCTCTGTGTGTGGGTGGCACAGAGGTCAACATTGTATTTTGACTGGTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194797.2 |
||
| CDS-3UTR CCA 90 bp | GGCACACAGATTCTGGGAGTAACCAACCAAGGCCCACCCCATAAGATGGAAGCCTCACATTGTCATCCTTaGTCACCAAGCAGGACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: GTQILGVTNQGPPHKMEASHCHP*SPSRTK Trigger: TTTTGTCCTGCTTGGTGACCAAGGATGACAATGTGA...GGCTTCCATCTTATGGGGTGGGCCTTGGTTGGTTACTCCCAGAATCTGTGTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194797.2 |
||
| 3UTR CAA 72 bp | TCCTCTGAATCACCATCATCTCTCACTGTACTTGCTTaGGAAGGTGGGCAGGGTCTAGAATACAGGCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: SSESPSSLTVLA*EGGQGLEYRHP Trigger: GGGATGCCTGTATTCTAGACCCTGCCCACCTTCCAAAGCAAGTACAGTGAGAGATGATGGTGATTCAGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR CAA 72 bp | GAGCAAGACAGCAGAAAACACTCAGCTCAAATTCGGTaGTCTTCATCCAATCCCTCTCCTCAGGACTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EQDSRKHSAQIR*SSSNPSPQDSG Trigger: GCCTGAGTCCTGAGGAGAGGGATTGGATGAAGACAACCGAATTTGAGCTGAGTGTTTTCTGCTGTCTTGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194797.2 |
||
| CDS-3UTR CCA 90 bp | GACCAAAGGTTTAAAGTCATTCTTGGCTACTCAGCAAATTCAGGCCATGCCAAGGTGAAGTTCAGGGTGTaGTTTGCCCAGCTGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: DQRFKVILGYSANSGHAKVKFRV*FAQLAL Trigger: CAGAGCCAGCTGGGCAAACCACACCCTGAACTTCAC...CTTGGCATGGCCTGAATTTGCTGAGTAGCCAAGAATGACTTTAAACCTTTGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR CAA 72 bp | CACTTTTGGAGTGAGTCCTCTCTCAGTTCATACTTGTaGCTTTCCAGAGCTCATCCAGCCTTGGGCTTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: HFWSESSLSSYL*LSRAHPALGLL Trigger: TAGCAAGCCCAAGGCTGGATGAGCTCTGGAAAGCAACAAGTATGAACTGAGAGAGGACTCACTCCAAAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR CAA 72 bp | AACAAGACTGAGACTCTGAGCCAGGAATGGTGCTGTTaGCCTTTCATTCCAGCAGAGACAAGAGGATCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NKTETLSQEWCC*PFIPAETRGSL Trigger: CAGAGATCCTCTTGTCTCTGCTGGAATGAAAGGCAAACAGCACCATTCCTGGCTCAGAGTCTCAGTCTTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| CDS-3UTR TCA 90 bp | AAGTCCACCTGCCTCTGCCTCCTGGATGCTGGAATTGAAGACATGTGCCAGCACTCTGTCTTCTTCCATTaGACAGAAACATCTTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KSTCLCLLDAGIEDMCQHSVFFH*TETSFV Trigger: GACAAAAGATGTTTCTGTTCAATGGAAGAAGACAGA...GTGCTGGCACATGTCTTCAATTCCAGCATCCAGGAGGCAGAGGCAGGTGGACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| CDS-3UTR TCA 90 bp | TCTCACTGTACTTGCTTTGGAAGGTGGGCAGGGTCTAGAATACAGGCATCCCATCAGGACAAAAACAGTTaGCAAGTCCCATTAGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SHCTCFGRWAGSRIQASHQDKNS*QVPLVQ Trigger: CTGGACTAATGGGACTTGTCAACTGTTTTTGTCCTG...ATGGGATGCCTGTATTCTAGACCCTGCCCACCTTCCAAAGCAAGTACAGTGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| CDS-3UTR TCA 90 bp | CTGGCTCTCTGCTATCTCTGTGTGAACAAGACTGACATCTGGCCAGAGAGTCTGCAAAGGGCAGAAATCTaGAATTCGAAGGGACACTTT | + |
|
Preference number: 4 (lower is better) Translates to: LALCYLCVNKTDIWPESLQRAEI*NSKGHF Trigger: AAAGTGTCCCTTCGAATTTCAGATTTCTGCCCTTTG...CAGACTCTCTGGCCAGATGTCAGTCTTGTTCACACAGAGATAGCAGAGAGCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| CDS-3UTR TCA 90 bp | CACTCTAGGCTTGAGGCCAGTCTGGTCTGCATAGTGAGTTTCAGACCATCCAGAACACACAGAAACAAATaGTGGCCCCGAGAAATAATG | + |
|
Preference number: 4 (lower is better) Translates to: HSRLEASLVCIVSFRPSRTHRNK*WPREIM Trigger: CATTATTTCTCGGGGCCATCATTTGTTTCTGTGTGT...TCTGGATGGTCTGAAACTCACTATGCAGACCAGACTGGCCTCAAGCCTAGAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| CDS-3UTR TCA 90 bp | TTTCGCCCCTATGGTACTGGAAGGGTCTCTGGGTGCTACCAAAGGAGAAAGGTAACACACAGAAACAAATaGTGGCCCCGAGAAATAATG | + |
|
Preference number: 4 (lower is better) Translates to: FRPYGTGRVSGCYQRRKVTHRNK*WPREIM Trigger: CATTATTTCTCGGGGCCATCATTTGTTTCTGTGTGT...TACCTTTCTCCTTTGGTAGCACCCAGAGACCCTTCCAGTACCATAGGGGCGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194797.2 |
||
| CDS-3UTR GCA 90 bp | TCTCACTGTACTTGCTTTGGAAGGTGGGCAGGGTCTAGAATACAGGCATCCCATGCTGGAAGTTCTTATTaGACACTTTTCCGCCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SHCTCFGRWAGSRIQASHAGSSY*TLFRLC Trigger: ACACAGGCGGAAAAGTGTGCAATAAGAACTTCCAGC...ATGGGATGCCTGTATTCTAGACCCTGCCCACCTTCCAAAGCAAGTACAGTGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| CDS-3UTR GCA 90 bp | GAGAGCAAGACAGCAGAAAACACTCAGCTCAAATTCGGTTGTCTTCATCCAATCTTGCAGGTGTATGTGTaGAGGCTGCTGGCGTCAATC | + |
|
Preference number: 4 (lower is better) Translates to: ESKTAENTQLKFGCLHPILQVYV*RLLASI Trigger: GATTGACGCCAGCAGCCTGCACACATACACCTGCAA...GATTGGATGAAGACAACCGAATTTGAGCTGAGTGTTTTCTGCTGTCTTGCTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194797.2 |
||
| CDS-3UTR CCA 90 bp | GACCAAAGGTTTAAAGTCATTCTTGGCTACTCAGCAAATTCAGGCCATGCCAAGTTGGAAGGCCTCAGCTaGACAGGCTTTCCTGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: DQRFKVILGYSANSGHAKLEGLS*TGFPET Trigger: TGTCTCAGGAAAGCCTGTCCAGCTGAGGCCTTCCAA...CTTGGCATGGCCTGAATTTGCTGAGTAGCCAAGAATGACTTTAAACCTTTGGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| CDS-3UTR CCA 90 bp | AGAGCAAGACAGCAGAAAACACTCAGCTCAAATTCGGTTGTCTTCATCCAATCCCTGCTGGCGTCAATCTaGTTCTCCCAGTGGGTACTA | + |
|
Preference number: 4 (lower is better) Translates to: RARQQKTLSSNSVVFIQSLLASI*FSQWVL Trigger: TAGTACCCACTGGGAGAACCAGATTGACGCCAGCAG...GGATTGGATGAAGACAACCGAATTTGAGCTGAGTGTTTTCTGCTGTCTTGCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194797.2 |
||
| CDS-3UTR CCA 90 bp | TCTCTTCAGCCTAGAAGCTGGTCCACAGACACATACAGACTCAGCATCCTTCAATCTGGTTCCTCTTCTTaGATCCAGACTTCCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLQPRSWSTDTYRLSILQSGSSS*IQTSWK Trigger: CTTCCAGGAAGTCTGGATCCAAGAAGAGGAACCAGA...TTGAAGGATGCTGAGTCTGTATGTGTCTGTGGACCAGCTTCTAGGCTGAAGAGA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| CDS-3UTR GCA 90 bp | GCCAAGCAATGTGTCGAGAGCAAGACAGCAGAAAACACTCAGCTCAAATTCGGTGCTGGAAGTTCTTATTaGACACTTTTCCGCCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: AKQCVESKTAENTQLKFGAGSSY*TLFRLC Trigger: ACACAGGCGGAAAAGTGTGCAATAAGAACTTCCAGC...ACCGAATTTGAGCTGAGTGTTTTCTGCTGTCTTGCTCTCGACACATTGCTTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194797.2 |
||
| 3UTR CAA 72 bp | AAACACTTTTGGAGTGAGTCCTCTCTCAGTTCATACTaGTTGCTTTCCAGAGCTCATCCAGCCTTGGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KHFWSESSLSSY*LLSRAHPALGL Trigger: CAAGCCCAAGGCTGGATGAGCTCTGGAAAGCAACAAGTATGAACTGAGAGAGGACTCACTCCAAAAGTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR CAA 72 bp | TCCATCATCTCTTATTGTCTCTGCTTACCAATCACCTaGACTCCACTCCCAGTAACTGCCTCAAGACCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SIISYCLCLPIT*TPLPVTASRPQ Trigger: CTGTGGTCTTGAGGCAGTTACTGGGAGTGGAGTCAAGGTGATTGGTAAGCAGAGACAATAAGAGATGATGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| CDS-3UTR GCA 90 bp | GTGATTCTTGGATCCAGAGATCTGTTTGAACTGCACCATCTAATTTCACTTCTTGTTCAGGGTGTGGTTTaGCCAGCTGGCTCTGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VILGSRDLFELHHLISLLVQGVV*PAGSVA Trigger: AGCAACAGAGCCAGCTGGGCAAACCACACCCTGAAC...AAGAAGTGAAATTAGATGGTGCAGTTCAAACAGATCTCTGGATCCAAGAATCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| CDS-3UTR CCA 90 bp | AGAGCAAGACAGCAGAAAACACTCAGCTCAAATTCGGTTGTCTTCATCCAATCCCTTTTGTCTGTATGTTaGAAGGCCTCAGCTGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: RARQQKTLSSNSVVFIQSLLSVC*KASAGQ Trigger: CTGTCCAGCTGAGGCCTTCCAACATACAGACAAAAG...GGATTGGATGAAGACAACCGAATTTGAGCTGAGTGTTTTCTGCTGTCTTGCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194797.2 |
||
| CDS-3UTR CCA 90 bp | TCTCTTCAGCCTAGAAGCTGGTCCACAGACACATACAGACTCAGCATCCTTCAATACTATTCCTTTGATTaGAGATCAGAGTGCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SLQPRSWSTDTYRLSILQYYSFD*RSECSL Trigger: GAGGGAGCACTCTGATCTCCAATCAAAGGAATAGTA...TTGAAGGATGCTGAGTCTGTATGTGTCTGTGGACCAGCTTCTAGGCTGAAGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| CDS-3UTR CCA 90 bp | GTGATTCTTGGATCCAGAGATCTGTTTGAACTGCACCATCTAATTTCACTTCTTAGGGAAAGTCTGCTGTaGCAACTGCTCCAGCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: VILGSRDLFELHHLISLLRESLL*QLLQHL Trigger: GAGGTGCTGGAGCAGTTGCCACAGCAGACTTTCCCT...AAGAAGTGAAATTAGATGGTGCAGTTCAAACAGATCTCTGGATCCAAGAATCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR CAA 72 bp | AGTGTAGGCAGGAGGACCAAAGGTTTAAAGTCATTCTaGGCTACTCAGCAAATTCAGGCCATGCCAAGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: SVGRRTKGLKSF*ATQQIQAMPSY Trigger: ATAGCTTGGCATGGCCTGAATTTGCTGAGTAGCCAAGAATGACTTTAAACCTTTGGTCCTCCTGCCTACACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| CDS-3UTR TCA 90 bp | CTCTGGGTGCTACCAAAGGAGAAAGGTAAACACAAACCCAGCTACAAACCCTTTCAAAGGGCAGAAATCTaGAATTCGAAGGGACACTTT | + |
|
Preference number: 4 (lower is better) Translates to: LWVLPKEKGKHKPSYKPFQRAEI*NSKGHF Trigger: AAAGTGTCCCTTCGAATTTCAGATTTCTGCCCTTTG...AAAGGGTTTGTAGCTGGGTTTGTGTTTACCTTTCTCCTTTGGTAGCACCCAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194797.2 |
||
| CDS-3UTR CCA 90 bp | AAGTCATTCTTGGCTACTCAGCAAATTCAGGCCATGCCAAGCTATGTCAGATCCTCACATTGTCATCCTTaGTCACCAAGCAGGACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: KSFLATQQIQAMPSYVRSSHCHP*SPSRTK Trigger: TTTTGTCCTGCTTGGTGACCAAGGATGACAATGTGA...GGATCTGACATAGCTTGGCATGGCCTGAATTTGCTGAGTAGCCAAGAATGACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| CDS-3UTR CCA 90 bp | TCTCTGCTTACCAATCACCTTGACTCCACTCCCAGTAACTGCCTCAAGACCACAATTTTTCTTGTGATGTaGAATCAGAAGGCTTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: SLLTNHLDSTPSNCLKTTIFLVM*NQKACT Trigger: AGTGCAAGCCTTCTGATTCCACATCACAAGAAAAAT...TGTGGTCTTGAGGCAGTTACTGGGAGTGGAGTCAAGGTGATTGGTAAGCAGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| 3UTR CAA 72 bp | AGGAGAAAGGTAAACACAAACCCAGCTACAAACCCTTaGATCTACATTCCTGACCTGCCTGCAAGATATGCA | + |
|
Preference number: 4 (lower is better) Translates to: RRKVNTNPATNP*IYIPDLPARYA Trigger: TGCATATCTTGCAGGCAGGTCAGGAATGTAGATCAAAGGGTTTGTAGCTGGGTTTGTGTTTACCTTTCTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194797.2 |
||
| CDS-3UTR TCA 90 bp | GCAACCAGTCAAAATACAATGTTGACCTCTGTGCCACCCACACACAGAGGGAATTCTGTCTTCTTCCATTaGACAGAAACATCTTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: ATSQNTMLTSVPPTHRGNSVFFH*TETSFV Trigger: GACAAAAGATGTTTCTGTTCAATGGAAGAAGACAGA...ATTCCCTCTGTGTGTGGGTGGCACAGAGGTCAACATTGTATTTTGACTGGTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194797.2 |
||
| CDS-3UTR TCA 90 bp | GTGATTCTTGGATCCAGAGATCTGTTTGAACTGCACCATCTAATTTCACTTCTTTTCGAAGGGACACTTTaGCAGCCATGGGTGAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VILGSRDLFELHHLISLLFEGTL*QPWVKF Trigger: GAACTTCACCCATGGCTGTCAAAGTGTCCCTTCGAA...AAGAAGTGAAATTAGATGGTGCAGTTCAAACAGATCTCTGGATCCAAGAATCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| CDS-3UTR CCA 90 bp | ATCATCTCTCACTGTACTTGCTTTGGAAGGTGGGCAGGGTCTAGAATACAGGCATCAAGTATAAGAAGCTaGAAGTTCTTATTGCACACT | + |
|
Preference number: 4 (lower is better) Translates to: IISHCTCFGRWAGSRIQASSIRS*KFLLHT Trigger: AGTGTGCAATAAGAACTTCCAGCTTCTTATACTTGA...TGCCTGTATTCTAGACCCTGCCCACCTTCCAAAGCAAGTACAGTGAGAGATGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| CDS-3UTR CCA 90 bp | GAAGCCATACCCAAACACTGCATAGATGGCCAAGAATTTGAGACCAAATATGTCTACTATTCCTTTGATTaGAGATCAGAGTGCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: EAIPKHCIDGQEFETKYVYYSFD*RSECSL Trigger: GAGGGAGCACTCTGATCTCCAATCAAAGGAATAGTA...GACATATTTGGTCTCAAATTCTTGGCCATCTATGCAGTGTTTGGGTATGGCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194797.2 |
||
| CDS-3UTR TCA 90 bp | GAAGCCATACCCAAACACTGCATAGATGGCCAAGAATTTGAGACCAAATATGTCACTAAAAGATACATTTaGCCAACTGGGACCATCATT | + |
|
Preference number: 4 (lower is better) Translates to: EAIPKHCIDGQEFETKYVTKRYI*PTGTII Trigger: AATGATGGTCCCAGTTGGTCAAATGTATCTTTTAGT...GACATATTTGGTCTCAAATTCTTGGCCATCTATGCAGTGTTTGGGTATGGCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194797.2 |
||
| CDS-3UTR TCA 90 bp | GTGATTCTTGGATCCAGAGATCTGTTTGAACTGCACCATCTAATTTCACTTCTTTGTACATTTTTCTTGTaGTGTGGAATCAGAAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VILGSRDLFELHHLISLLCTFFL*CGIRRL Trigger: AAGCCTTCTGATTCCACATCACAAGAAAAATGTACA...AAGAAGTGAAATTAGATGGTGCAGTTCAAACAGATCTCTGGATCCAAGAATCAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| CDS TCA 90 bp | AGTTCTCCAGCTCTCTGCGGCTCAGCCTGGCAGGGTTGTGAGCTTTaGGCCATGGGTTTCCAACCTCCTCGTACACGGTACAACTTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSPALCGSAWQGCEL*AMGFQPPRTRYNLR Trigger: CCTTAAGTTGTACCGTGTACGAGGAGGTTGGAAACCCATGGCTCAAAGCTCACAACCCTGCCAGGCTGAGCCGCAGAGAGCTGGAGAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| CDS TCA 90 bp | ACATCAAAGTTCTCCAGCTCTCTGCGGCTCAGCCTGGCAGGGTTGTaGGCTTTGAGCCATGGGTTTCCAACCTCCTCGTACACGGTACAA | + |
|
Preference number: 5 (lower is better) Translates to: TSKFSSSLRLSLAGL*ALSHGFPTSSYTVQ Trigger: TTGTACCGTGTACGAGGAGGTTGGAAACCCATGGCTCAAAGCTCACAACCCTGCCAGGCTGAGCCGCAGAGAGCTGGAGAACTTTGATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| CDS GCA 90 bp | CGAAGGGACACTTTGACAGCCATGGGTGAAGTTCAGGGTGTGGTTTaGCCAGCTGGCTCTGTTGCTAACGTTGCAGGTGTATGTGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RRDTLTAMGEVQGVV*PAGSVANVAGVCVQ Trigger: CTGCACACATACACCTGCAACGTTAGCAACAGAGCCAGCTGGGCAAACCACACCCTGAACTTCACCCATGGCTGTCAAAGTGTCCCTTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004829.13 ENSMUST00000194797.2 |
||
| CDS-3UTR CAA 90 bp | CAGGGCAGGAACTCATGCAAGCTGGGAACCAGGAAGCAGGAACTGCATCAGGAACTCACATTGTCATCCTaGGTCACCAAGCAGGACAAA | + |
|
Preference number: 5 (lower is better) Translates to: QGRNSCKLGTRKQELHQELTLSS*VTKQDK Trigger: TTTGTCCTGCTTGGTGACCAAGGATGACAATGTGAG...TTCCTGATGCAGTTCCTGCTTCCTGGTTCCCAGCTTGCATGAGTTCCTGCCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194797.2 |
||
| CDS TCA 90 bp | ATGATCACCCCAAAGGGCAGAAATCTGAAATTCGAAGGGACACTTTaGCAGCCATGGGTGAAGTTCAGGGTGTGGTTTGCCCAGCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: MITPKGRNLKFEGTL*QPWVKFRVWFAQLA Trigger: AGCCAGCTGGGCAAACCACACCCTGAACTTCACCCATGGCTGTCAAAGTGTCCCTTCGAATTTCAGATTTCTGCCCTTTGGGGTGATCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004829.13 ENSMUST00000194797.2 |
||
| CDS GCA 90 bp | CACTGTATCATAGAGTACATGGTGCCTCTATCTCCAGGGAAAGTCTaGTGTGGCAACTGCTCCAGCACCTCAGAAACACGCCTGTCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: HCIIEYMVPLSPGKV*CGNCSSTSETRLSN Trigger: ATTGGACAGGCGTGTTTCTGAGGTGCTGGAGCAGTTGCCACAGCAGACTTTCCCTGGAGATAGAGGCACCATGTACTCTATGATACAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| CDS CCA 90 bp | TATCATAGAGTACATGGTGCCTCTATCTCCAGGGAAAGTCTGCTGTaGCAACTGCTCCAGCACCTCAGAAACACGCCTGTCCAATTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: YHRVHGASISRESLL*QLLQHLRNTPVQFS Trigger: AGAGAATTGGACAGGCGTGTTTCTGAGGTGCTGGAGCAGTTGCCACAGCAGACTTTCCCTGGAGATAGAGGCACCATGTACTCTATGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| CDS CCA 90 bp | GGGTTTCCAACCTCCTCGTACACGGTACAACTTAAGGAAGAGTTCTaGTTCCTCTTCTTGGATCCAGACTTCCTGGAAGGCTGGACTACT | + |
|
Preference number: 5 (lower is better) Translates to: GFPTSSYTVQLKEEF*FLFLDPDFLEGWTT Trigger: AGTAGTCCAGCCTTCCAGGAAGTCTGGATCCAAGAAGAGGAACCAGAACTCTTCCTTAAGTTGTACCGTGTACGAGGAGGTTGGAAACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| CDS-3UTR CAA 90 bp | CACTCTAGGCTTGAGGCCAGTCTGGTCTGCATAGTGAGTTTCAGACCATCCAGACTCACATTGTCATCCTaGGTCACCAAGCAGGACAAA | + |
|
Preference number: 5 (lower is better) Translates to: HSRLEASLVCIVSFRPSRLTLSS*VTKQDK Trigger: TTTGTCCTGCTTGGTGACCAAGGATGACAATGTGAG...TCTGGATGGTCTGAAACTCACTATGCAGACCAGACTGGCCTCAAGCCTAGAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| CDS-3UTR CAA 90 bp | GATGGCCAAGAATTTGAGACCAAATATGTCAGACTCCTAGGGGTGAACCAAATAGGCCCTAGAGCATCCTaGTTGATCCCTGCTGGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: DGQEFETKYVRLLGVNQIGPRAS*LIPAGS Trigger: CGAGCCAGCAGGGATCAACAAGGATGCTCTAGGGCC...TATTTGGTTCACCCCTAGGAGTCTGACATATTTGGTCTCAAATTCTTGGCCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194797.2 |
||
| CDS CCA 90 bp | TGCTGGCGTCAATCTGGTTCTCCCAGTGGGTACTATTCCTTTGATTaGAGATCAGAGTGCTCCCTCTGTACAAAGCGTAGCTCACATTGT | + |
|
Preference number: 5 (lower is better) Translates to: CWRQSGSPSGYYSFD*RSECSLCTKRSSHC Trigger: ACAATGTGAGCTACGCTTTGTACAGAGGGAGCACTCTGATCTCCAATCAAAGGAATAGTACCCACTGGGAGAACCAGATTGACGCCAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004829.13 ENSMUST00000194797.2 |
||
| CDS-3UTR CAA 90 bp | TTTATTTTTCTGGGGTTAGGGATTGAGACAGGGTTTCTCTGTGCAGCATTATCTGGCCCTAGAGCATCCTaGTTGATCCCTGCTGGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: FIFLGLGIETGFLCAALSGPRAS*LIPAGS Trigger: CGAGCCAGCAGGGATCAACAAGGATGCTCTAGGGCC...AGATAATGCTGCACAGAGAAACCCTGTCTCAATCCCTAACCCCAGAAAAATAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| CDS-3UTR CAA 90 bp | CACTCTAGGCTTGAGGCCAGTCTGGTCTGCATAGTGAGTTTCAGACCATCCAGAGTGGAATCAGAAGGCTaGCACTGTATCATAGAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: HSRLEASLVCIVSFRPSRVESEG*HCIIEY Trigger: GTACTCTATGATACAGTGCAAGCCTTCTGATTCCAC...TCTGGATGGTCTGAAACTCACTATGCAGACCAGACTGGCCTCAAGCCTAGAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| CDS TCA 90 bp | AGATCCAGAGGCCCTAGAGCATCCTTGTTGATCCCTGCTGGCTCGTaGGTCCTTGACATATTCATATATTGTCAAAGGTTCCTTAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RSRGPRASLLIPAGS*VLDIFIYCQRFLRA Trigger: AGCCCTAAGGAACCTTTGACAATATATGAATATGTCAAGGACTCACGAGCCAGCAGGGATCAACAAGGATGCTCTAGGGCCTCTGGATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004829.13 ENSMUST00000194797.2 |
||
| CDS GCA 90 bp | TCTGGTTCTCCCAGTGGGTACTATTCCTTTGATTGGAGATCAGAGTaGTCCCTCTGTACAAAGCGTAGCTCACATTGTCATCCTTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SGSPSGYYSFDWRSE*SLCTKRSSHCHPWS Trigger: TGACCAAGGATGACAATGTGAGCTACGCTTTGTACAGAGGGAGCACTCTGATCTCCAATCAAAGGAATAGTACCCACTGGGAGAACCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004829.13 ENSMUST00000194797.2 |
||
| CDS-3UTR CAA 90 bp | CACTCTAGGCTTGAGGCCAGTCTGGTCTGCATAGTGAGTTTCAGACCATCCAGAGAACAGAAACATCTTTaGTCTGTATGTTGGAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: HSRLEASLVCIVSFRPSREQKHL*SVCWKA Trigger: GGCCTTCCAACATACAGACAAAAGATGTTTCTGTTC...TCTGGATGGTCTGAAACTCACTATGCAGACCAGACTGGCCTCAAGCCTAGAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| CDS-3UTR CAA 90 bp | CCTCTCCTCAGGACTCAGGCAACCAGTCAAAATACAATGTTGACCTCTGTGCCAGAACAGAAACATCTTTaGTCTGTATGTTGGAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PLLRTQATSQNTMLTSVPEQKHL*SVCWKA Trigger: GGCCTTCCAACATACAGACAAAAGATGTTTCTGTTC...TGGCACAGAGGTCAACATTGTATTTTGACTGGTTGCCTGAGTCCTGAGGAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194797.2 |
||
| CDS-3UTR CAA 90 bp | ATGGTGCTGTTTGCCTTTCATTCCAGCAGAGACAAGAGGATCTCTGTGAGTTTGTTCTGGTTCCTCTTCTaGGATCCAGACTTCCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: MVLFAFHSSRDKRISVSLFWFLF*DPDFLE Trigger: TTCCAGGAAGTCTGGATCCAAGAAGAGGAACCAGAA...CAAACTCACAGAGATCCTCTTGTCTCTGCTGGAATGAAAGGCAAACAGCACCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| CDS-3UTR CAA 90 bp | ATCATCTCTCACTGTACTTGCTTTGGAAGGTGGGCAGGGTCTAGAATACAGGCATGCAGCTTAGCTGACTaGATACTAAGAGCAAAATCC | + |
|
Preference number: 5 (lower is better) Translates to: IISHCTCFGRWAGSRIQACSLAD*ILRAKS Trigger: GGATTTTGCTCTTAGTATCAAGTCAGCTAAGCTGCA...TGCCTGTATTCTAGACCCTGCCCACCTTCCAAAGCAAGTACAGTGAGAGATGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| CDS-3UTR CAA 90 bp | GCACCACCCAGCTTCTCCATCATCTCTTATTGTCTCTGCTTACCAATCACCTTGCTGGCTCGTGAGTCCTaGACATATTCATATATTGTC | + |
|
Preference number: 5 (lower is better) Translates to: APPSFSIISYCLCLPITLLARES*TYSYIV Trigger: GACAATATATGAATATGTCAAGGACTCACGAGCCAG...CAAGGTGATTGGTAAGCAGAGACAATAAGAGATGATGGAGAAGCTGGGTGGTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| CDS-3UTR CAA 90 bp | GCAACCAGTCAAAATACAATGTTGACCTCTGTGCCACCCACACACAGAGGGAATCTGGCTCGTGAGTCCTaGACATATTCATATATTGTC | + |
|
Preference number: 5 (lower is better) Translates to: ATSQNTMLTSVPPTHRGNLARES*TYSYIV Trigger: GACAATATATGAATATGTCAAGGACTCACGAGCCAG...ATTCCCTCTGTGTGTGGGTGGCACAGAGGTCAACATTGTATTTTGACTGGTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194797.2 |
||
| CDS-3UTR CAA 90 bp | CTCTGGGTGCTACCAAAGGAGAAAGGTAAACACAAACCCAGCTACAAACCCTTTTGCAGCTTAGCTGACTaGATACTAAGAGCAAAATCC | + |
|
Preference number: 5 (lower is better) Translates to: LWVLPKEKGKHKPSYKPFCSLAD*ILRAKS Trigger: GGATTTTGCTCTTAGTATCAAGTCAGCTAAGCTGCA...AAAGGGTTTGTAGCTGGGTTTGTGTTTACCTTTCTCCTTTGGTAGCACCCAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194797.2 |
||
| CDS GCA 90 bp | ACATATTCATATATTGTCAAAGGTTCCTTAGGGCTGAACTGTAACTaGTTCCTCTTCTTAGTCCACACACAGAAACAAATGATGGCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: TYSYIVKGSLGLNCN*FLFLVHTQKQMMAP Trigger: CGGGGCCATCATTTGTTTCTGTGTGTGGACTAAGAAGAGGAAGCAGTTACAGTTCAGCCCTAAGGAACCTTTGACAATATATGAATATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004829.13 ENSMUST00000194797.2 |
||
| CDS-3UTR CAA 90 bp | GTGATTCTTGGATCCAGAGATCTGTTTGAACTGCACCATCTAATTTCACTTCTTGCAGGACAAAAACAGTaGACAAGTCCCATTAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VILGSRDLFELHHLISLLAGQKQ*TSPISP Trigger: TGGACTAATGGGACTTGTCAACTGTTTTTGTCCTGC...AAGAAGTGAAATTAGATGGTGCAGTTCAAACAGATCTCTGGATCCAAGAATCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| CDS TCA 72 bp | GCTCTCTGCGGCTCAGCCTGGCAGGGTTGTGAGCTTTaGGCCATGGGTTTCCAACCTCCTCGTACACGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: ALCGSAWQGCEL*AMGFQPPRTRY Trigger: GTACCGTGTACGAGGAGGTTGGAAACCCATGGCTCAAAGCTCACAACCCTGCCAGGCTGAGCCGCAGAGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| CDS CAA 90 bp | TGGCAACTGCTCCAGCACCTCAGAAACACGCCTGTCCAATTCTCTTaGTCCCCTCCCATCTTCCTGGACAGCCGAGGGAGATCCAGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: WQLLQHLRNTPVQFS*SPPIFLDSRGRSRG Trigger: GCCTCTGGATCTCCCTCGGCTGTCCAGGAAGATGGGAGGGGACAAAGAGAATTGGACAGGCGTGTTTCTGAGGTGCTGGAGCAGTTGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| CDS GCA 72 bp | CAGCTGGCTCTGTTGCTAACGTTGCAGGTGTATGTGTaGAGGCTGCTGGCGTCAATCTGGTTCTCCCAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: QLALLLTLQVYV*RLLASIWFSQW Trigger: CCACTGGGAGAACCAGATTGACGCCAGCAGCCTGCACACATACACCTGCAACGTTAGCAACAGAGCCAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004829.13 ENSMUST00000194797.2 |
||
| CDS CAA 72 bp | AGGGTGTGGTTTGCCCAGCTGGCTCTGTTGCTAACGTaGCAGGTGTATGTGTGCAGGCTGCTGGCGTCAATC | + |
|
Preference number: 6 (lower is better) Translates to: RVWFAQLALLLT*QVYVCRLLASI Trigger: GATTGACGCCAGCAGCCTGCACACATACACCTGCAACGTTAGCAACAGAGCCAGCTGGGCAAACCACACCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004829.13 ENSMUST00000194797.2 |
||
| CDS CCA 72 bp | GTACATGGTGCCTCTATCTCCAGGGAAAGTCTGCTGTaGCAACTGCTCCAGCACCTCAGAAACACGCCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: VHGASISRESLL*QLLQHLRNTPV Trigger: GACAGGCGTGTTTCTGAGGTGCTGGAGCAGTTGCCACAGCAGACTTTCCCTGGAGATAGAGGCACCATGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| CDS GCA 72 bp | GTGCCTCTATCTCCAGGGAAAGTCTGCTGTGGCAACTaGTCCAGCACCTCAGAAACACGCCTGTCCAATTCT | + |
|
Preference number: 6 (lower is better) Translates to: VPLSPGKVCCGN*SSTSETRLSNS Trigger: AGAATTGGACAGGCGTGTTTCTGAGGTGCTGGAGCAGTTGCCACAGCAGACTTTCCCTGGAGATAGAGGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| CDS CAA 90 bp | CAGGCTGCTGGCGTCAATCTGGTTCTCCCAGTGGGTACTATTCCTTaGATTGGAGATCAGAGTGCTCCCTCTGTACAAAGCGTAGCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: QAAGVNLVLPVGTIP*IGDQSAPSVQSVAH Trigger: GTGAGCTACGCTTTGTACAGAGGGAGCACTCTGATCTCCAATCAAAGGAATAGTACCCACTGGGAGAACCAGATTGACGCCAGCAGCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004829.13 ENSMUST00000194797.2 |
||
| CDS CAA 90 bp | GATGATCACCCCAAAGGGCAGAAATCTGAAATTCGAAGGGACACTTaGACAGCCATGGGTGAAGTTCAGGGTGTGGTTTGCCCAGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: DDHPKGQKSEIRRDT*TAMGEVQGVVCPAG Trigger: GCCAGCTGGGCAAACCACACCCTGAACTTCACCCATGGCTGTCAAAGTGTCCCTTCGAATTTCAGATTTCTGCCCTTTGGGGTGATCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004829.13 ENSMUST00000194797.2 |
||
| CDS TCA 72 bp | TTGTCATCCTTGGTCACCAAGCAGGACAAAAACAGTTaGCAAGTCCCATTAGTCCAGGGCTTCCACTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LSSLVTKQDKNS*QVPLVQGFHWA Trigger: GGCCCAGTGGAAGCCCTGGACTAATGGGACTTGTCAACTGTTTTTGTCCTGCTTGGTGACCAAGGATGACAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004829.13 ENSMUST00000194797.2 |
||
| CDS CAA 90 bp | GTAGCTCACATTGTCATCCTTGGTCACCAAGCAGGACAAAAACAGTaGACAAGTCCCATTAGTCCAGGGCTTCCACTGGGCCTTCAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: VAHIVILGHQAGQKQ*TSPISPGLPLGLQV Trigger: AACCTGAAGGCCCAGTGGAAGCCCTGGACTAATGGGACTTGTCAACTGTTTTTGTCCTGCTTGGTGACCAAGGATGACAATGTGAGCTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004829.13 ENSMUST00000194797.2 |
||
| CDS CAA 90 bp | TCAATATTCCTTTCTTATCTCAGAAACACGCCTGTCCAATTCTCTTaGTCCCCTCCCATCTTCCTGGACAGCCGAGGGAGATCCAGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SIFLSYLRNTPVQFS*SPPIFLDSRGRSRG Trigger: GCCTCTGGATCTCCCTCGGCTGTCCAGGAAGATGGGAGGGGACAAAGAGAATTGGACAGGCGTGTTTCTGAGATAAGAAAGGAATATTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194797.2 |
||
| CDS TCA 72 bp | GGAAGTTCTTATTGCACACTTTTCCGCCTGTGTTGGTaGTCTCCAGCAGGTAGTGACCACTGTCTTGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: GSSYCTLFRLCW*SPAGSDHCLAA Trigger: AGCTGCAAGACAGTGGTCACTACCTGCTGGAGATCACCAACACAGGCGGAAAAGTGTGCAATAAGAACTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004829.13 ENSMUST00000194797.2 |
||
| CDS TCA 72 bp | CCAAAGGGCAGAAATCTGAAATTCGAAGGGACACTTTaGCAGCCATGGGTGAAGTTCAGGGTGTGGTTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: PKGRNLKFEGTL*QPWVKFRVWFA Trigger: GGCAAACCACACCCTGAACTTCACCCATGGCTGTCAAAGTGTCCCTTCGAATTTCAGATTTCTGCCCTTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004829.13 ENSMUST00000194797.2 |
||
| CDS CCA 72 bp | CAATCTGGTTCTCCCAGTGGGTACTATTCCTTTGATTaGAGATCAGAGTGCTCCCTCTGTACAAAGCGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: QSGSPSGYYSFD*RSECSLCTKRS Trigger: GCTACGCTTTGTACAGAGGGAGCACTCTGATCTCCAATCAAAGGAATAGTACCCACTGGGAGAACCAGATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004829.13 ENSMUST00000194797.2 |
||
| CDS TCA 72 bp | GGCTTCCACTGGGCCTTCAGGTTAGGGGTCTCAACATaGTCAAGTATAAGAAGCTGGAAGTTCTTATTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: GFHWAFRLGVST*SSIRSWKFLLH Trigger: GTGCAATAAGAACTTCCAGCTTCTTATACTTGATCATGTTGAGACCCCTAACCTGAAGGCCCAGTGGAAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004829.13 ENSMUST00000194797.2 |
||
| CDS TCA 72 bp | GGCCCTAGAGCATCCTTGTTGATCCCTGCTGGCTCGTaGGTCCTTGACATATTCATATATTGTCAAAGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: GPRASLLIPAGS*VLDIFIYCQRF Trigger: GAACCTTTGACAATATATGAATATGTCAAGGACTCACGAGCCAGCAGGGATCAACAAGGATGCTCTAGGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004829.13 ENSMUST00000194797.2 |
||
| CDS GCA 72 bp | CCCAGTGGGTACTATTCCTTTGATTGGAGATCAGAGTaGTCCCTCTGTACAAAGCGTAGCTCACATTGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: PSGYYSFDWRSE*SLCTKRSSHCH Trigger: ATGACAATGTGAGCTACGCTTTGTACAGAGGGAGCACTCTGATCTCCAATCAAAGGAATAGTACCCACTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004829.13 ENSMUST00000194797.2 |
||
| CDS CCA 72 bp | TCCCTCTGTACAAAGCGTAGCTCACATTGTCATCCTTaGTCACCAAGCAGGACAAAAACAGTTGACAAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SLCTKRSSHCHP*SPSRTKTVDKS Trigger: GGACTTGTCAACTGTTTTTGTCCTGCTTGGTGACCAAGGATGACAATGTGAGCTACGCTTTGTACAGAGGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004829.13 ENSMUST00000194797.2 |
||
| CDS CAA 72 bp | ACGGTACAACTTAAGGAAGAGTTCTGGTTCCTCTTCTaGGATCCAGACTTCCTGGAAGGCTGGACTACTGAA | + |
|
Preference number: 6 (lower is better) Translates to: TVQLKEEFWFLF*DPDFLEGWTTE Trigger: TTCAGTAGTCCAGCCTTCCAGGAAGTCTGGATCCAAGAAGAGGAACCAGAACTCTTCCTTAAGTTGTACCGT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| CDS CCA 72 bp | TCTTCCATTGAACAGAAACATCTTTTGTCTGTATGTTaGAAGGCCTCAGCTGGACAGGCTTTCCTGAGACAC | + |
|
Preference number: 6 (lower is better) Translates to: SSIEQKHLLSVC*KASAGQAFLRH Trigger: GTGTCTCAGGAAAGCCTGTCCAGCTGAGGCCTTCCAACATACAGACAAAAGATGTTTCTGTTCAATGGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004829.13 ENSMUST00000194797.2 |
||
| CDS TCA 72 bp | CTCCAGCAGGTAGTGACCACTGTCTTGCAGCTTAGCTaGCTTGATACTAAGAGCAAAATCCCCATAATCAAA | + |
|
Preference number: 6 (lower is better) Translates to: LQQVVTTVLQLS*LDTKSKIPIIK Trigger: TTTGATTATGGGGATTTTGCTCTTAGTATCAAGTCAGCTAAGCTGCAAGACAGTGGTCACTACCTGCTGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004829.13 ENSMUST00000194797.2 |
||
| CDS CAA 90 bp | ACTGAATATACTGTACATTTTTCTTGTGATGTGGAATCAGAAGGCTaGCACTGTATCATAGAGTACATGGTGCCTCTATCTCCAGGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: TEYTVHFSCDVESEG*HCIIEYMVPLSPGK Trigger: TTTCCCTGGAGATAGAGGCACCATGTACTCTATGATACAGTGCAAGCCTTCTGATTCCACATCACAAGAAAAATGTACAGTATATTCAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| CDS GCA 72 bp | TATATTGTCAAAGGTTCCTTAGGGCTGAACTGTAACTaGTTCCTCTTCTTAGTCCACACACAGAAACAAATG | + |
|
Preference number: 6 (lower is better) Translates to: YIVKGSLGLNCN*FLFLVHTQKQM Trigger: CATTTGTTTCTGTGTGTGGACTAAGAAGAGGAAGCAGTTACAGTTCAGCCCTAAGGAACCTTTGACAATATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004829.13 ENSMUST00000194797.2 |
||
| CDS CAA 72 bp | ACTGTACATTTTTCTTGTGATGTGGAATCAGAAGGCTaGCACTGTATCATAGAGTACATGGTGCCTCTATCT | + |
|
Preference number: 6 (lower is better) Translates to: TVHFSCDVESEG*HCIIEYMVPLS Trigger: AGATAGAGGCACCATGTACTCTATGATACAGTGCAAGCCTTCTGATTCCACATCACAAGAAAAATGTACAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004829.13 |
||
| CDS TCA 72 bp | ATCATTATACCAATTCAGGATCTCAATTTTTCTGTGTaGGCCCTGTTCTGTCTTCTTCCATTGAACAGAAAC | + |
|
Preference number: 6 (lower is better) Translates to: IIIPIQDLNFSV*ALFCLLPLNRN Trigger: GTTTCTGTTCAATGGAAGAAGACAGAACAGGGCTCACACAGAAAAATTGAGATCCTGAATTGGTATAATGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004829.13 ENSMUST00000194797.2 |
||