Pregenerated sensors for CD22 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030577Ensembl transcript IDs: ENSMUST00000019248.13, ENSMUST00000108125.9, ENSMUST00000186154.7, ENSMUST00000187989.7, ENSMUST00000188157.7, ENSMUST00000189718.7, ENSMUST00000190455.2, ENSMUST00000190617.7, ENSMUST00000190646.7, ENSMUST00000190753.2, ENSMUST00000214289.2
Found 482 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | GGTGGTGGGTGCCTGGGGTTGGAGAAGCAGACGTGGCACAATGCGTaGGGGAGGATCACCAGCCAGAGAAGGCCGGTCAGGTCTGGCCAG | + |
Preference number: 1 (lower is better) Translates to: GGGCLGLEKQTWHNA*GRITSQRRPVRSGQ Trigger: CTGGCCAGACCTGACCGGCCTTCTCTGGCTGGTGATCCTCCCTCACGCATTGTGCCACGTCTGCTTCTCCAACCCCAGGCACCCACCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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3UTR GCA 90 bp | AGATGGTGGTGGGTGCCTGGGGTTGGAGAAGCAGACGTGGCACAATaGGTGAGGGAGGATCACCAGCCAGAGAAGGCCGGTCAGGTCTGG | + |
Preference number: 1 (lower is better) Translates to: RWWWVPGVGEADVAQ*VREDHQPEKAGQVW Trigger: CCAGACCTGACCGGCCTTCTCTGGCTGGTGATCCTCCCTCACGCATTGTGCCACGTCTGCTTCTCCAACCCCAGGCACCCACCACCATCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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3UTR CCA 90 bp | CCAGCTGCAGTGAGGCACAGGATGGAGCAGATGGTGGTGGGTGCCTaGGGTTGGAGAAGCAGACGTGGCACAATGCGTGAGGGAGGATCA | + |
Preference number: 1 (lower is better) Translates to: PAAVRHRMEQMVVGA*GWRSRRGTMREGGS Trigger: TGATCCTCCCTCACGCATTGTGCCACGTCTGCTTCTCCAACCCCAGGCACCCACCACCATCTGCTCCATCCTGTGCCTCACTGCAGCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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3UTR TCA 90 bp | AGGACAAGGTGGCCTTCTTCCCCTCCATCACATGGTCCCCAGGGCTaGTGGACACACGCAGCCTCCGAGGAGCATACAGCACTTGGAGGT | + |
Preference number: 1 (lower is better) Translates to: RTRWPSSPPSHGPQG*WTHAASEEHTALGG Trigger: ACCTCCAAGTGCTGTATGCTCCTCGGAGGCTGCGTGTGTCCATCAGCCCTGGGGACCATGTGATGGAGGGGAAGAAGGCCACCTTGTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
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3UTR CCA 90 bp | GCATCACTCTCACAGGACAAGGTGGCCTTCTTCCCCTCCATCACATaGTCCCCAGGGCTGATGGACACACGCAGCCTCCGAGGAGCATAC | + |
Preference number: 1 (lower is better) Translates to: ASLSQDKVAFFPSIT*SPGLMDTRSLRGAY Trigger: GTATGCTCCTCGGAGGCTGCGTGTGTCCATCAGCCCTGGGGACCATGTGATGGAGGGGAAGAAGGCCACCTTGTCCTGTGAGAGTGATGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
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3UTR TCA 90 bp | GCACGCCTGAGTCCGTGCCCAGGGAGCTGCCGGTGCCTTAGCATCTaGGCTGCAGCAGCTGAAGGAGTTGTCTTCTTTAGGCTCAAGAAC | + |
Preference number: 1 (lower is better) Translates to: ARLSPCPGSCRCLSI*AAAAEGVVFFRLKN Trigger: GTTCTTGAGCCTAAAGAAGACAACTCCTTCAGCTGCTGCAGCTCAGATGCTAAGGCACCGGCAGCTCCCTGGGCACGGACTCAGGCGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000187989.7 ENSMUST00000189718.7 ENSMUST00000190617.7 ENSMUST00000190646.7 |
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3UTR CCA 90 bp | GGAATCCTGATGCAGGCTCCCTCCCAGGCAAAGAGGGTTTGGGGATaGTCAACGGTCCAATCATTTGCTGAGCTGTACCGAGCCGAAGCC | + |
Preference number: 1 (lower is better) Translates to: GILMQAPSQAKRVWG*STVQSFAELYRAEA Trigger: GGCTTCGGCTCGGTACAGCTCAGCAAATGATTGGACCGTTGACCATCCCCAAACCCTCTTTGCCTGGGAGGGAGCCTGCATCAGGATTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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3UTR CCA 90 bp | TCCAGGGGTTCCAGTCTCAGTTTCTGGCCTGAGGAGTGGAGGTCTTaGCCACTGGAGTCAAACCAGGTGTACTGTGAGATGGGCGGATTG | + |
Preference number: 1 (lower is better) Translates to: SRGSSLSFWPEEWRS*PLESNQVYCEMGGL Trigger: CAATCCGCCCATCTCACAGTACACCTGGTTTGACTCCAGTGGCCAAGACCTCCACTCCTCAGGCCAGAAACTGAGACTGGAACCCCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
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3UTR CCA 90 bp | AGGCCGCTTCTGTATCACCGAGTAAGTGACCGAGTCGCTGTTGTTTaGAGGAGGAGCCTGTGTTGCTGGGGTCCCTGCATCTCCAGTGTT | + |
Preference number: 1 (lower is better) Translates to: RPLLYHRVSDRVAVV*RRSLCCWGPCISSV Trigger: AACACTGGAGATGCAGGGACCCCAGCAACACAGGCTCCTCCTCCAAACAACAGCGACTCGGTCACTTACTCGGTGATACAGAAGCGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
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3UTR GCA 90 bp | GGGGCCGCTTACCAGCCCCAAACTGAACCAGCTCTGAGTAATGGATaGTCTCATCCTCCGGGCAGCTCGGATTCACATTCTCATAATCCC | + |
Preference number: 1 (lower is better) Translates to: GAAYQPQTEPALSNG*SHPPGSSDSHSHNP Trigger: GGGATTATGAGAATGTGAATCCGAGCTGCCCGGAGGATGAGAGCATCCATTACTCAGAGCTGGTTCAGTTTGGGGCTGGTAAGCGGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
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3UTR CCA 90 bp | CTTGGCCACTGGAGTCAAACCAGGTGTACTGTGAGATGGGCGGATTaGCATCACTCTCACAGGACAAGGTGGCCTTCTTCCCCTCCATCA | + |
Preference number: 1 (lower is better) Translates to: LGHWSQTRCTVRWAD*HHSHRTRWPSSPPS Trigger: TGATGGAGGGGAAGAAGGCCACCTTGTCCTGTGAGAGTGATGCCAATCCGCCCATCTCACAGTACACCTGGTTTGACTCCAGTGGCCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
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3UTR CCA 90 bp | AGTGGAGGTCTTGGCCACTGGAGTCAAACCAGGTGTACTGTGAGATaGGCGGATTGGCATCACTCTCACAGGACAAGGTGGCCTTCTTCC | + |
Preference number: 1 (lower is better) Translates to: SGGLGHWSQTRCTVR*ADWHHSHRTRWPSS Trigger: GGAAGAAGGCCACCTTGTCCTGTGAGAGTGATGCCAATCCGCCCATCTCACAGTACACCTGGTTTGACTCCAGTGGCCAAGACCTCCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
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3UTR CCA 90 bp | TTGCAAGGAATCCTGATGCAGGCTCCCTCCCAGGCAAAGAGGGTTTaGGGATGGTCAACGGTCCAATCATTTGCTGAGCTGTACCGAGCC | + |
Preference number: 1 (lower is better) Translates to: LQGILMQAPSQAKRV*GWSTVQSFAELYRA Trigger: GGCTCGGTACAGCTCAGCAAATGATTGGACCGTTGACCATCCCCAAACCCTCTTTGCCTGGGAGGGAGCCTGCATCAGGATTCCTTGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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3UTR TCA 90 bp | CCAGACGTGCCTTGGGTAGTGGAGTTTTGTACTTGCAAGGAATCCTaGTGCAGGCTCCCTCCCAGGCAAAGAGGGTTTGGGGATGGTCAA | + |
Preference number: 1 (lower is better) Translates to: PDVPWVVEFCTCKES*CRLPPRQRGFGDGQ Trigger: TTGACCATCCCCAAACCCTCTTTGCCTGGGAGGGAGCCTGCATCAGGATTCCTTGCAAGTACAAAACTCCACTACCCAAGGCACGTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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3UTR TCA 90 bp | AAGGGTAGATGTGAACCCTGGAGGGTTCTGGAGCATAGTGCACCGTaGGTTCCACTTCTTCCGACTCTCCTGGGCCTATGTCGTTGGAAG | + |
Preference number: 1 (lower is better) Translates to: KGRCEPWRVLEHSAP*VPLLPTLLGLCRWK Trigger: CTTCCAACGACATAGGCCCAGGAGAGTCGGAAGAAGTGGAACTCACGGTGCACTATGCTCCAGAACCCTCCAGGGTTCACATCTACCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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3UTR GCA 90 bp | CTCCGAGACATTGAGGTGAATGGGCTCCATCCATCGTTCAGTCCCTaGGGTCATCCTCAACCCCAGATTCCCACTGTCATTGGCACGTAT | + |
Preference number: 1 (lower is better) Translates to: LRDIEVNGLHPSFSP*GHPQPQIPTVIGTY Trigger: ATACGTGCCAATGACAGTGGGAATCTGGGGTTGAGGATGACCGCAGGGACTGAACGATGGATGGAGCCCATTCACCTCAATGTCTCGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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3UTR CCA 90 bp | TTCTGGAGCATAGTGCACCGTGAGTTCCACTTCTTCCGACTCTCCTaGGCCTATGTCGTTGGAAGCCTGGCACCGGTATTTCCCTCTCAT | + |
Preference number: 1 (lower is better) Translates to: FWSIVHREFHFFRLS*AYVVGSLAPVFPSH Trigger: ATGAGAGGGAAATACCGGTGCCAGGCTTCCAACGACATAGGCCCAGGAGAGTCGGAAGAAGTGGAACTCACGGTGCACTATGCTCCAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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3UTR CCA 90 bp | GGAGTTGTACCTACAGACCAGGGTCACACTGTCTCCTTCCAGGATTaGTGTGAAGCTCTGAATCACTGTGGTCACCGCCTTGGGAGCATA | + |
Preference number: 1 (lower is better) Translates to: GVVPTDQGHTVSFQD*CEALNHCGHRLGSI Trigger: TATGCTCCCAAGGCGGTGACCACAGTGATTCAGAGCTTCACACCAATCCTGGAAGGAGACAGTGTGACCCTGGTCTGTAGGTACAACTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000187989.7 ENSMUST00000190455.2 ENSMUST00000190646.7 |
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3UTR CCA 90 bp | AGTTCCACTTCTTCCGACTCTCCTGGGCCTATGTCGTTGGAAGCCTaGCACCGGTATTTCCCTCTCATGTCCTTGGTCACTGAATGCAGA | + |
Preference number: 1 (lower is better) Translates to: SSTSSDSPGPMSLEA*HRYFPLMSLVTECR Trigger: TCTGCATTCAGTGACCAAGGACATGAGAGGGAAATACCGGTGCCAGGCTTCCAACGACATAGGCCCAGGAGAGTCGGAAGAAGTGGAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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3UTR TCA 90 bp | ACGCAGCCTCCGAGGAGCATACAGCACTTGGAGGTTCCAGGCCTGTaGCAAGGTCTCTCCGATGGAGTTGTTGACCATGCAGTTATAATT | + |
Preference number: 1 (lower is better) Translates to: TQPPRSIQHLEVPGL*QGLSDGVVDHAVII Trigger: AATTATAACTGCATGGTCAACAACTCCATCGGAGAGACCTTGTCACAGGCCTGGAACCTCCAAGTGCTGTATGCTCCTCGGAGGCTGCGT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
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3UTR CCA 90 bp | TCCGATGGAGTTGTTGACCATGCAGTTATAATTTCCAGAATCTTCTaGGGAGACGGAGCCGAAGCTCAGGTACCTCCCTTCCTGCACGAG | + |
Preference number: 1 (lower is better) Translates to: SDGVVDHAVIISRIF*GDGAEAQVPPFLHE Trigger: CTCGTGCAGGAAGGGAGGTACCTGAGCTTCGGCTCCGTCTCCCCAGAAGATTCTGGAAATTATAACTGCATGGTCAACAACTCCATCGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
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3UTR TCA 90 bp | CTTGGAGGTTCCAGGCCTGTGACAAGGTCTCTCCGATGGAGTTGTTaGCCATGCAGTTATAATTTCCAGAATCTTCTGGGGAGACGGAGC | + |
Preference number: 1 (lower is better) Translates to: LGGSRPVTRSLRWSC*PCSYNFQNLLGRRS Trigger: GCTCCGTCTCCCCAGAAGATTCTGGAAATTATAACTGCATGGTCAACAACTCCATCGGAGAGACCTTGTCACAGGCCTGGAACCTCCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
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3UTR CCA 90 bp | GTTCAGTCCATTATCATCAAGGCAGGAGGATGGCAGCATCCAGGTTaGCATGGTGCAGGAGGAGCTGAGAGTTCTACATCTTCATGTGCT | + |
Preference number: 1 (lower is better) Translates to: VQSIIIKAGGWQHPG*HGAGGAESSTSSCA Trigger: AGCACATGAAGATGTAGAACTCTCAGCTCCTCCTGCACCATGCCAACCTGGATGCTGCCATCCTCCTGCCTTGATGATAATGGACTGAAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019248.13 |
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3UTR CCA 90 bp | GTTCAGTCCCTGCGGTCATCCTCAACCCCAGATTCCCACTGTCATTaGCACGTATCGGGTGGATTTTCAGGGTACAATTGTCTATTCTGT | + |
Preference number: 1 (lower is better) Translates to: VQSLRSSSTPDSHCH*HVSGGFSGYNCLFC Trigger: ACAGAATAGACAATTGTACCCTGAAAATCCACCCGATACGTGCCAATGACAGTGGGAATCTGGGGTTGAGGATGACCGCAGGGACTGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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3UTR CCA 90 bp | GGTATTTCCCTCTCATGTCCTTGGTCACTGAATGCAGAATTAGCTTaGACATCTGTTGTTCCTGTTCCAGTTCCTGATCCTCTAGGGGGC | + |
Preference number: 1 (lower is better) Translates to: GISLSCPWSLNAELA*TSVVPVPVPDPLGG Trigger: GCCCCCTAGAGGATCAGGAACTGGAACAGGAACAACAGATGTCCAAGCTAATTCTGCATTCAGTGACCAAGGACATGAGAGGGAAATACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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3UTR TCA 90 bp | AGGCCAAGCATATTCAAACCATCACAGCTCGCATGCATGAAACCCTaGGTTCAATACCAACACTGTGAGACAATGGTGCCTCTAGGGACT | + |
Preference number: 1 (lower is better) Translates to: RPSIFKPSQLACMKP*VQYQHCETMVPLGT Trigger: AGTCCCTAGAGGCACCATTGTCTCACAGTGTTGGTATTGAACTCAGGGTTTCATGCATGCGAGCTGTGATGGTTTGAATATGCTTGGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019248.13 |
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3UTR TCA 90 bp | ATTCAGTCCACAGGTCAGAGTGACACTTTGGGATTCCCGGATTTCTaGTGGCATCTGGATGTAAGGTTGGAACGGTTTCTCCGAGACATT | + |
Preference number: 1 (lower is better) Translates to: IQSTGQSDTLGFPDF*WHLDVRLERFLRDI Trigger: AATGTCTCGGAGAAACCGTTCCAACCTTACATCCAGATGCCATCAGAAATCCGGGAATCCCAAAGTGTCACTCTGACCTGTGGACTGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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3UTR CCA 90 bp | CTATGTCGTTGGAAGCCTGGCACCGGTATTTCCCTCTCATGTCCTTaGTCACTGAATGCAGAATTAGCTTGGACATCTGTTGTTCCTGTT | + |
Preference number: 1 (lower is better) Translates to: LCRWKPGTGISLSCP*SLNAELAWTSVVPV Trigger: AACAGGAACAACAGATGTCCAAGCTAATTCTGCATTCAGTGACCAAGGACATGAGAGGGAAATACCGGTGCCAGGCTTCCAACGACATAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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3UTR GCA 90 bp | AGGGTACAATTGTCTATTCTGTTCCCCAGAAATGTTACTCTCCCTTaGTTAGAAAGGTACAGCTCAGACTCTGGGTCCTTCTCAGTCTTT | + |
Preference number: 1 (lower is better) Translates to: RVQLSILFPRNVTLP*LERYSSDSGSFSVF Trigger: AAAGACTGAGAAGGACCCAGAGTCTGAGCTGTACCTTTCTAAGCAAGGGAGAGTAACATTTCTGGGGAACAGAATAGACAATTGTACCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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3UTR GCA 90 bp | TTCCAGTGTGATCAATCACCAATACAAAGGAGTTCATGTGACAGCTaGGCCACTTTTAATATGAAGCACTTATTGAATTATATATGTCCA | + |
Preference number: 1 (lower is better) Translates to: FQCDQSPIQRSSCDS*ATFNMKHLLNYICP Trigger: TGGACATATATAATTCAATAAGTGCTTCATATTAAAAGTGGCGCAGCTGTCACATGAACTCCTTTGTATTGGTGATTGATCACACTGGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019248.13 |
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3UTR-3UTR TCA 90 bp | GCTGATGGACACACGCAGCCTCCGAGGAGCATACAGCACTTGGAGGTTCCAGGCCACATCCAGCTGCAGTaGGGCACAGGATGGAGCAGA | + |
Preference number: 2 (lower is better) Translates to: ADGHTQPPRSIQHLEVPGHIQLQ*GTGWSR Trigger: TCTGCTCCATCCTGTGCCTCACTGCAGCTGGATGTG...GCCTGGAACCTCCAAGTGCTGTATGCTCCTCGGAGGCTGCGTGTGTCCATCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190646.7 |
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3UTR-3UTR TCA 90 bp | TCATCAAGGCAGGAGGATGGCAGCATCCAGGTTGGCATGGTGCAGGAGGAGCTGCACATCCAGCTGCAGTaGGGCACAGGATGGAGCAGA | + |
Preference number: 2 (lower is better) Translates to: SSRQEDGSIQVGMVQEELHIQLQ*GTGWSR Trigger: TCTGCTCCATCCTGTGCCTCACTGCAGCTGGATGTG...CAGCTCCTCCTGCACCATGCCAACCTGGATGCTGCCATCCTCCTGCCTTGATGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019248.13 |
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3UTR-3UTR TCA 90 bp | ATGGAGCAGATGGTGGTGGGTGCCTGGGGTTGGAGAAGCAGACGTGGCACAATGCACATCCAGCTGCAGTaGGGCACAGGATGGAGCAGA | + |
Preference number: 2 (lower is better) Translates to: MEQMVVGAWGWRSRRGTMHIQLQ*GTGWSR Trigger: TCTGCTCCATCCTGTGCCTCACTGCAGCTGGATGTG...CATTGTGCCACGTCTGCTTCTCCAACCCCAGGCACCCACCACCATCTGCTCCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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3UTR-3UTR TCA 90 bp | TCAGGCAGAAGCCTAGTCCCAAGGCGACCCGCTTGCCGATGGTCTCTGGACTGTTCCCATGTCACTTTCTaGATCCTCAGCACTCCGGGT | + |
Preference number: 2 (lower is better) Translates to: SGRSLVPRRPACRWSLDCSHVTF*ILSTPG Trigger: ACCCGGAGTGCTGAGGATTCAGAAAGTGACATGGGA...ACAGTCCAGAGACCATCGGCAAGCGGGTCGCCTTGGGACTAGGCTTCTGCCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
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3UTR-3UTR TCA 90 bp | ATGACAGGGAGGGCCCACGAACACTTGTGGTTGCAGGCAGCACAGCTGACAGGCGTTTCTCCGAGACATTaGGGTGAATGGGCTCCATCC | + |
Preference number: 2 (lower is better) Translates to: MTGRAHEHLWLQAAQLTGVSPRH*GEWAPS Trigger: GGATGGAGCCCATTCACCTCAATGTCTCGGAGAAAC...GCCTGTCAGCTGTGCTGCCTGCAACCACAAGTGTTCGTGGGCCCTCCCTGTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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3UTR-3UTR GCA 90 bp | TATGTCCATTCCGTTCTGTCTGCTCAGCGTCCAGGACCCCCGAGGGAAGGCACCGCCAACTGGGGACAGTaGCTCTTGCTTCCTTACTTC | + |
Preference number: 2 (lower is better) Translates to: YVHSVLSAQRPGPPREGTANWGQ*LLLPYF Trigger: GAAGTAAGGAAGCAAGAGGCACTGTCCCCAGTTGGC...GGTGCCTTCCCTCGGGGGTCCTGGACGCTGAGCAGACAGAACGGAATGGACATA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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3UTR-3UTR TCA 90 bp | TCCAGGACCCCCGAGGGAAGGCACCATCTCCACAGAAGGTCCAACATCTTTGTACGGTGCCTTAGCATCTaGGCTGCAGCAGCTGAAGGA | + |
Preference number: 2 (lower is better) Translates to: SRTPEGRHHLHRRSNIFVRCLSI*AAAAEG Trigger: TCCTTCAGCTGCTGCAGCTCAGATGCTAAGGCACCG...TACAAAGATGTTGGACCTTCTGTGGAGATGGTGCCTTCCCTCGGGGGTCCTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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3UTR-3UTR TCA 90 bp | CAGGATGGAGCAGATGGTGGTGGGTGCCTGGGGTTGGAGAAGCAGACGTGGCACAATACAGGGTTTCCTTaGAAAACCCTGGCTGTCCTG | + |
Preference number: 2 (lower is better) Translates to: QDGADGGGCLGLEKQTWHNTGFP*KTLAVL Trigger: CAGGACAGCCAGGGTTTTTCAAGGAAACCCTGTATT...GTGCCACGTCTGCTTCTCCAACCCCAGGCACCCACCACCATCTGCTCCATCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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3UTR-3UTR TCA 90 bp | CCTTTGCCTGGGGCCGCTTACCAGCCCCAAACTGAACCAGCTCTGAGTAATGGAGACTGTAGTAGACAGTaGGGGTGCTGGGTGGTGACT | + |
Preference number: 2 (lower is better) Translates to: PLPGAAYQPQTEPALSNGDCSRQ*GCWVVT Trigger: AGTCACCACCCAGCACCCTCACTGTCTACTACAGTC...TCCATTACTCAGAGCTGGTTCAGTTTGGGGCTGGTAAGCGGCCCCAGGCAAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
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3UTR-3UTR CCA 90 bp | CATCCATTGCCGGATTGTAGCATCCCTGGGATTGGGGGCCTTCTGAGAGAGGGGTCTCACAGGACAAGGTaGCCTTCTTCCCCTCCATCA | + |
Preference number: 2 (lower is better) Translates to: HPLPDCSIPGIGGLLREGSHRTR*PSSPPS Trigger: TGATGGAGGGGAAGAAGGCCACCTTGTCCTGTGAGA...CCCCTCTCTCAGAAGGCCCCCAATCCCAGGGATGCTACAATCCGGCAATGGATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
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3UTR-3UTR CCA 90 bp | GGAGGTCTTGGCCACTGGAGTCAAACCAGGTGTACTGTGAGATGGGCGGATTGGGCTCTGAGAGCACTTTaGAGGAGTGCTGGACTTGGC | + |
Preference number: 2 (lower is better) Translates to: GGLGHWSQTRCTVRWADWALRAL*RSAGLG Trigger: GCCAAGTCCAGCACTCCTCCAAAGTGCTCTCAGAGC...CCAATCCGCCCATCTCACAGTACACCTGGTTTGACTCCAGTGGCCAAGACCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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3UTR CAA 90 bp | TGCACCGTGAGTTCCACTTCTTCCGACTCTCCTGGGCCTATGTCGTaGGAAGCCTGGCACCGGTATTTCCCTCTCATGTCCTTGGTCACT | + |
Preference number: 2 (lower is better) Translates to: CTVSSTSSDSPGPMS*EAWHRYFPLMSLVT Trigger: AGTGACCAAGGACATGAGAGGGAAATACCGGTGCCAGGCTTCCAACGACATAGGCCCAGGAGAGTCGGAAGAAGTGGAACTCACGGTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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3UTR-3UTR TCA 90 bp | TCCTTACTTCTGTCCTTCCTGGGGATTTCTCCCCAGGGCCAGAAAGTGGGTAGTCGGTGCCTTAGCATCTaGGCTGCAGCAGCTGAAGGA | + |
Preference number: 2 (lower is better) Translates to: SLLLSFLGISPQGQKVGSRCLSI*AAAAEG Trigger: TCCTTCAGCTGCTGCAGCTCAGATGCTAAGGCACCG...ACTACCCACTTTCTGGCCCTGGGGAGAAATCCCCAGGAAGGACAGAAGTAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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3UTR-3UTR GCA 90 bp | CCATGTCACTTTCTGAATCCTCAGCACTCCGGGTTTGAGCACACTCCCAGAACCCCATCGTTCAGTCCCTaGGGTCATCCTCAACCCCAG | + |
Preference number: 2 (lower is better) Translates to: PCHFLNPQHSGFEHTPRTPSFSP*GHPQPQ Trigger: CTGGGGTTGAGGATGACCGCAGGGACTGAACGATGG...GGTTCTGGGAGTGTGCTCAAACCCGGAGTGCTGAGGATTCAGAAAGTGACATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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3UTR-3UTR CCA 90 bp | AGTCAAACCAGGTGTACTGTGAGATGGGCGGATTGGCATCACTCTCACAGGACAGTGGGTGCCTGGGGTTaGAGAAGCAGACGTGGCACA | + |
Preference number: 2 (lower is better) Translates to: SQTRCTVRWADWHHSHRTVGAWG*RSRRGT Trigger: TGTGCCACGTCTGCTTCTCCAACCCCAGGCACCCAC...TGTCCTGTGAGAGTGATGCCAATCCGCCCATCTCACAGTACACCTGGTTTGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190646.7 |
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3UTR-3UTR CCA 90 bp | TCCTTACTTCTGTCCTTCCTGGGGATTTCTCCCCAGGGCCAGAAAGTGGGTAGTTGGAGCAGATGGTGGTaGGTGCCTGGGGTTGGAGAA | + |
Preference number: 2 (lower is better) Translates to: SLLLSFLGISPQGQKVGSWSRWW*VPGVGE Trigger: TTCTCCAACCCCAGGCACCCACCACCATCTGCTCCA...ACTACCCACTTTCTGGCCCTGGGGAGAAATCCCCAGGAAGGACAGAAGTAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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3UTR-3UTR CCA 90 bp | TCCTTACTTCTGTCCTTCCTGGGGATTTCTCCCCAGGGCCAGAAAGTGGGTAGTACAGGATGGAGCAGATaGTGGTGGGTGCCTGGGGTT | + |
Preference number: 2 (lower is better) Translates to: SLLLSFLGISPQGQKVGSTGWSR*WWVPGV Trigger: AACCCCAGGCACCCACCACCATCTGCTCCATCCTGT...ACTACCCACTTTCTGGCCCTGGGGAGAAATCCCCAGGAAGGACAGAAGTAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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3UTR-3UTR CCA 90 bp | TATGTCCATTCCGTTCTGTCTGCTCAGCGTCCAGGACCCCCGAGGGAAGGCACCCCCAGGGCCAGAAAGTaGGTAGTAAGATTAGTGAAC | + |
Preference number: 2 (lower is better) Translates to: YVHSVLSAQRPGPPREGTPRARK*VVRLVN Trigger: GTTCACTAATCTTACTACCCACTTTCTGGCCCTGGG...GGTGCCTTCCCTCGGGGGTCCTGGACGCTGAGCAGACAGAACGGAATGGACATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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3UTR-3UTR CCA 90 bp | ATGGAGCAGATGGTGGTGGGTGCCTGGGGTTGGAGAAGCAGACGTGGCACAATGCTGCTAGGAGAAAACTaGCTAAAGCCCATGCCCACA | + |
Preference number: 2 (lower is better) Translates to: MEQMVVGAWGWRSRRGTMLLGEN*LKPMPT Trigger: TGTGGGCATGGGCTTTAGCCAGTTTTCTCCTAGCAG...CATTGTGCCACGTCTGCTTCTCCAACCCCAGGCACCCACCACCATCTGCTCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019248.13 |
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3UTR-3UTR CCA 90 bp | GGCACAGGATGGAGCAGATGGTGGTGGGTGCCTGGGGTTGGAGAAGCAGACGTGTTGTTGCACTTGGACTaGCCAGTGACTCACAAATCA | + |
Preference number: 2 (lower is better) Translates to: GTGWSRWWWVPGVGEADVLLHLD*PVTHKS Trigger: TGATTTGTGAGTCACTGGCCAGTCCAAGTGCAACAA...CACGTCTGCTTCTCCAACCCCAGGCACCCACCACCATCTGCTCCATCCTGTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190646.7 |
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3UTR-3UTR CCA 90 bp | GGATGGAGCAGATGGTGGTGGGTGCCTGGGGTTGGAGAAGCAGACGTGGCACAAGTCTCCTTCCAGGATTaGTGTGAAGCTCTGAATCAC | + |
Preference number: 2 (lower is better) Translates to: GWSRWWWVPGVGEADVAQVSFQD*CEALNH Trigger: GTGATTCAGAGCTTCACACCAATCCTGGAAGGAGAC...TTGTGCCACGTCTGCTTCTCCAACCCCAGGCACCCACCACCATCTGCTCCATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190646.7 |
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3UTR-3UTR CCA 90 bp | GGAGGTCTTGGCCACTGGAGTCAAACCAGGTGTACTGTGAGATGGGCGGATTGGCAGGCAAAGAGGGTTTaGGGATGGTCAACGGTCCAA | + |
Preference number: 2 (lower is better) Translates to: GGLGHWSQTRCTVRWADWQAKRV*GWSTVQ Trigger: TTGGACCGTTGACCATCCCCAAACCCTCTTTGCCTG...CCAATCCGCCCATCTCACAGTACACCTGGTTTGACTCCAGTGGCCAAGACCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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3UTR-3UTR CCA 90 bp | GCTGATGGACACACGCAGCCTCCGAGGAGCATACAGCACTTGGAGGTTCCAGGCTGTCCAGACGTGCCTTaGGTAGTGGAGTTTTGTACT | + |
Preference number: 2 (lower is better) Translates to: ADGHTQPPRSIQHLEVPGCPDVP*VVEFCT Trigger: AGTACAAAACTCCACTACCCAAGGCACGTCTGGACA...GCCTGGAACCTCCAAGTGCTGTATGCTCCTCGGAGGCTGCGTGTGTCCATCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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3UTR-3UTR CCA 90 bp | CCCAGGGCTGATGGACACACGCAGCCTCCGAGGAGCATACAGCACTTGGAGGTTGTACAGCTCAGACTCTaGGTCCTTCTCAGTCTTTGT | + |
Preference number: 2 (lower is better) Translates to: PRADGHTQPPRSIQHLEVVQLRL*VLLSLC Trigger: ACAAAGACTGAGAAGGACCCAGAGTCTGAGCTGTAC...AACCTCCAAGTGCTGTATGCTCCTCGGAGGCTGCGTGTGTCCATCAGCCCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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3UTR CAA 90 bp | GGGGTATACTTAACATCCAGACGCACAGTGCGCTCTGAGAGCACTTaGGAGGAGTGCTGGACTTGGCACTTCACACTCTTTCCGTGGTCC | + |
Preference number: 2 (lower is better) Translates to: GVYLTSRRTVRSEST*EECWTWHFTLFPWS Trigger: GGACCACGGAAAGAGTGTGAAGTGCCAAGTCCAGCACTCCTCCAAAGTGCTCTCAGAGCGCACTGTGCGTCTGGATGTTAAGTATACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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3UTR-3UTR TCA 90 bp | TCATCAAGGCAGGAGGATGGCAGCATCCAGGTTGGCATGGTGCAGGAGGAGCTGAATACAGGGTTTCCTTaGAAAACCCTGGCTGTCCTG | + |
Preference number: 2 (lower is better) Translates to: SSRQEDGSIQVGMVQEELNTGFP*KTLAVL Trigger: CAGGACAGCCAGGGTTTTTCAAGGAAACCCTGTATT...CAGCTCCTCCTGCACCATGCCAACCTGGATGCTGCCATCCTCCTGCCTTGATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019248.13 |
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3UTR-3UTR TCA 90 bp | GTGGACATTCAGGATGACAGGGAGGGCCCACGAACACTTGTGGTTGCAGGCAGCAATACAGGGTTTCCTTaGAAAACCCTGGCTGTCCTG | + |
Preference number: 2 (lower is better) Translates to: VDIQDDREGPRTLVVAGSNTGFP*KTLAVL Trigger: CAGGACAGCCAGGGTTTTTCAAGGAAACCCTGTATT...GCTGCCTGCAACCACAAGTGTTCGTGGGCCCTCCCTGTCATCCTGAATGTCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
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3UTR-3UTR TCA 90 bp | CAGATAGTCAGGCAGAAGCCTAGTCCCAAGGCGACCCGCTTGCCGATGGTCTCTAATACAGGGTTTCCTTaGAAAACCCTGGCTGTCCTG | + |
Preference number: 2 (lower is better) Translates to: QIVRQKPSPKATRLPMVSNTGFP*KTLAVL Trigger: CAGGACAGCCAGGGTTTTTCAAGGAAACCCTGTATT...AGAGACCATCGGCAAGCGGGTCGCCTTGGGACTAGGCTTCTGCCTGACTATCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
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3UTR-3UTR CCA 90 bp | TTCTGTCCTTCCTGGGGATTTCTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTAGTGGGTGCCTGGGGTTaGAGAAGCAGACGTGGCACA | + |
Preference number: 2 (lower is better) Translates to: FCPSWGFLPRARKWVVRLVGAWG*RSRRGT Trigger: TGTGCCACGTCTGCTTCTCCAACCCCAGGCACCCAC...TAATCTTACTACCCACTTTCTGGCCCTGGGGAGAAATCCCCAGGAAGGACAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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3UTR-3UTR CCA 90 bp | ATTCAGGATGACAGGGAGGGCCCACGAACACTTGTGGTTGCAGGCAGCACAGCTATGCGGAGCTTCTCTTaGGTGTCTCCAGGTATAGGT | + |
Preference number: 2 (lower is better) Translates to: IQDDREGPRTLVVAGSTAMRSFS*VSPGIG Trigger: ACCTATACCTGGAGACACCCAAGAGAAGCTCCGCAT...AGCTGTGCTGCCTGCAACCACAAGTGTTCGTGGGCCCTCCCTGTCATCCTGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
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3UTR-3UTR CCA 90 bp | CACATAGTCTACGTCTTCCTTTGCCTGGGGCCGCTTACCAGCCCCAAACTGAACAGCTCTGAATCACTGTaGTCACCGCCTTGGGAGCAT | + |
Preference number: 2 (lower is better) Translates to: HIVYVFLCLGPLTSPKLNSSESL*SPPWEH Trigger: ATGCTCCCAAGGCGGTGACCACAGTGATTCAGAGCT...GTTCAGTTTGGGGCTGGTAAGCGGCCCCAGGCAAAGGAAGACGTAGACTATGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
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3UTR CAA 90 bp | AGGAGGATGTTGTCCAGACGTGCCTTGGGTAGTGGAGTTTTGTACTaGCAAGGAATCCTGATGCAGGCTCCCTCCCAGGCAAAGAGGGTT | + |
Preference number: 2 (lower is better) Translates to: RRMLSRRALGSGVLY*QGILMQAPSQAKRV Trigger: AACCCTCTTTGCCTGGGAGGGAGCCTGCATCAGGATTCCTTGCAAGTACAAAACTCCACTACCCAAGGCACGTCTGGACAACATCCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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3UTR CAA 90 bp | CGCCCATCCTTGAACCAAGACACCGCCACGGTCCTGAGTTTCGGGTaGCTGCTGTTAACCCGGCATGTCATGGTCACAGAATTGTTCTTT | + |
Preference number: 2 (lower is better) Translates to: RPSLNQDTATVLSFG*LLLTRHVMVTELFF Trigger: AAAGAACAATTCTGTGACCATGACATGCCGGGTTAACAGCAGCAACCCGAAACTCAGGACCGTGGCGGTGTCTTGGTTCAAGGATGGGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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3UTR-3UTR TCA 90 bp | TTCTTTAGGCTCAAGAACCTGAAACAGCAGCTGCTACCCACCTCAGTGCTTGAGAGTGGACATTCAGGATaGCAGGGAGGGCCCACGAAC | + |
Preference number: 2 (lower is better) Translates to: FFRLKNLKQQLLPTSVLESGHSG*QGGPTN Trigger: GTTCGTGGGCCCTCCCTGTCATCCTGAATGTCCACT...CTCAAGCACTGAGGTGGGTAGCAGCTGCTGTTTCAGGTTCTTGAGCCTAAAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
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3UTR-3UTR TCA 90 bp | TTCTGGATTTTCATCCCCCAGATGGCCAGGATGCAGATAGTCAGGCAGAAGCCTGACTGTAGTAGACAGTaGGGGTGCTGGGTGGTGACT | + |
Preference number: 2 (lower is better) Translates to: FWIFIPQMARMQIVRQKPDCSRQ*GCWVVT Trigger: AGTCACCACCCAGCACCCTCACTGTCTACTACAGTC...AGGCTTCTGCCTGACTATCTGCATCCTGGCCATCTGGGGGATGAAAATCCAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
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3UTR-3UTR GCA 90 bp | CACATAGTCTACGTCTTCCTTTGCCTGGGGCCGCTTACCAGCCCCAAACTGAACACCCAGACGGTTCTCTaGCAAGCAAGAGTAATTCCC | + |
Preference number: 2 (lower is better) Translates to: HIVYVFLCLGPLTSPKLNTQTVL*QARVIP Trigger: GGGAATTACTCTTGCTTGGCAGAGAACCGTCTGGGT...GTTCAGTTTGGGGCTGGTAAGCGGCCCCAGGCAAAGGAAGACGTAGACTATGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
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3UTR-3UTR GCA 90 bp | GCAGCTGAAGGAGTTGTCTTCTTTAGGCTCAAGAACCTGAAACAGCAGCTGCTAAGGAGGAGCCTGTGTTaGTGGGGTCCCTGCATCTCC | + |
Preference number: 2 (lower is better) Translates to: AAEGVVFFRLKNLKQQLLRRSLC*WGPCIS Trigger: GGAGATGCAGGGACCCCAGCAACACAGGCTCCTCCT...TAGCAGCTGCTGTTTCAGGTTCTTGAGCCTAAAGAAGACAACTCCTTCAGCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
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3UTR-3UTR CCA 90 bp | GCAGCTGAAGGAGTTGTCTTCTTTAGGCTCAAGAACCTGAAACAGCAGCTGCTAGTGGGTGCCTGGGGTTaGAGAAGCAGACGTGGCACA | + |
Preference number: 2 (lower is better) Translates to: AAEGVVFFRLKNLKQQLLVGAWG*RSRRGT Trigger: TGTGCCACGTCTGCTTCTCCAACCCCAGGCACCCAC...TAGCAGCTGCTGTTTCAGGTTCTTGAGCCTAAAGAAGACAACTCCTTCAGCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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3UTR-3UTR CCA 90 bp | AGTGTTAGTGACGATTACAACAGGAACACATCCAGCTGCAGTGAGGCACAGGATGTGGGTGCCTGGGGTTaGAGAAGCAGACGTGGCACA | + |
Preference number: 2 (lower is better) Translates to: SVSDDYNRNTSSCSEAQDVGAWG*RSRRGT Trigger: TGTGCCACGTCTGCTTCTCCAACCCCAGGCACCCAC...ATCCTGTGCCTCACTGCAGCTGGATGTGTTCCTGTTGTAATCGTCACTAACACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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3UTR-3UTR CCA 90 bp | CCTTTGCCTGGGGCCGCTTACCAGCCCCAAACTGAACCAGCTCTGAGTAATGGAGTCTCCTTCCAGGATTaGTGTGAAGCTCTGAATCAC | + |
Preference number: 2 (lower is better) Translates to: PLPGAAYQPQTEPALSNGVSFQD*CEALNH Trigger: GTGATTCAGAGCTTCACACCAATCCTGGAAGGAGAC...TCCATTACTCAGAGCTGGTTCAGTTTGGGGCTGGTAAGCGGCCCCAGGCAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
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3UTR-3UTR CCA 90 bp | GAGCACACTCCCAGAACCTTGAGGGTTCCATCTGTAGGAGGTGACGTCTGGATTTCCAGTCTCAGTTTCTaGCCTGAGGAGTGGAGGTCT | + |
Preference number: 2 (lower is better) Translates to: EHTPRTLRVPSVGGDVWISSLSF*PEEWRS Trigger: AGACCTCCACTCCTCAGGCCAGAAACTGAGACTGGA...AATCCAGACGTCACCTCCTACAGATGGAACCCTCAAGGTTCTGGGAGTGTGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
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3UTR-3UTR TCA 90 bp | GGGTTGCTGCTGTTAACCCGGCATGTCATGGTCACAGAATTGTTCTTTTCCACCGTCCACAGGTCAGAGTaGCACTTTGGGATTCCCGGA | + |
Preference number: 2 (lower is better) Translates to: GLLLLTRHVMVTELFFSTVHRSE*HFGIPG Trigger: TCCGGGAATCCCAAAGTGTCACTCTGACCTGTGGAC...GGTGGAAAAGAACAATTCTGTGACCATGACATGCCGGGTTAACAGCAGCAACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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3UTR-3UTR CCA 90 bp | GCAGTTATAATTTCCAGAATCTTCTGGGGAGACGGAGCCGAAGCTCAGGTACCTGAGGAGTGGAGGTCTTaGCCACTGGAGTCAAACCAG | + |
Preference number: 2 (lower is better) Translates to: AVIISRIFWGDGAEAQVPEEWRS*PLESNQ Trigger: CTGGTTTGACTCCAGTGGCCAAGACCTCCACTCCTC...AGGTACCTGAGCTTCGGCTCCGTCTCCCCAGAAGATTCTGGAAATTATAACTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
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3UTR-3UTR CCA 90 bp | TCCAGTGTTGTGCGTGTCACTCTCTGGAAAGCGCAAGATGGCATAACTAACGGTGAGGAGTGGAGGTCTTaGCCACTGGAGTCAAACCAG | + |
Preference number: 2 (lower is better) Translates to: SSVVRVTLWKAQDGITNGEEWRS*PLESNQ Trigger: CTGGTTTGACTCCAGTGGCCAAGACCTCCACTCCTC...ACCGTTAGTTATGCCATCTTGCGCTTTCCAGAGAGTGACACGCACAACACTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
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3UTR-3UTR CCA 90 bp | GAGCACACTCCCAGAACCTTGAGGGTTCCATCTGTAGGAGGTGACGTCTGGATTCTTGCCGATGGTCTCTaGACTGTAGTAGACAGTGAG | + |
Preference number: 2 (lower is better) Translates to: EHTPRTLRVPSVGGDVWILADGL*TVVDSE Trigger: CTCACTGTCTACTACAGTCCAGAGACCATCGGCAAG...AATCCAGACGTCACCTCCTACAGATGGAACCCTCAAGGTTCTGGGAGTGTGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
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3UTR-3UTR CCA 90 bp | TCTGGCCTGAGGAGTGGAGGTCTTGGCCACTGGAGTCAAACCAGGTGTACTGTGGTCAGAGTGACACTTTaGGATTCCCGGATTTCTGAT | + |
Preference number: 2 (lower is better) Translates to: SGLRSGGLGHWSQTRCTVVRVTL*DSRISD Trigger: ATCAGAAATCCGGGAATCCCAAAGTGTCACTCTGAC...CACAGTACACCTGGTTTGACTCCAGTGGCCAAGACCTCCACTCCTCAGGCCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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3UTR-3UTR TCA 90 bp | CTGTCCTTCCTGGGGATTTCTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTAGTTTAGGCTCAAGAACCTaGAACAGCAGCTGCTACCCA | + |
Preference number: 2 (lower is better) Translates to: LSFLGISPQGQKVGSKISLGSRT*NSSCYP Trigger: TGGGTAGCAGCTGCTGTTTCAGGTTCTTGAGCCTAA...ACTAATCTTACTACCCACTTTCTGGCCCTGGGGAGAAATCCCCAGGAAGGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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3UTR-3UTR TCA 90 bp | GGATTTCTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTAGTGAACGGGGTAGAGTTAGGCTCAAGAACCTaGAACAGCAGCTGCTACCCA | + |
Preference number: 2 (lower is better) Translates to: GFLPRARKWVVRLVNGVELGSRT*NSSCYP Trigger: TGGGTAGCAGCTGCTGTTTCAGGTTCTTGAGCCTAA...CTCTACCCCGTTCACTAATCTTACTACCCACTTTCTGGCCCTGGGGAGAAATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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3UTR-3UTR TCA 90 bp | CTTTGTAGAAGAAAAGCCAACTGGGGACAGTGCCTCTTGCTTCCTTACTTCTGTCGGTGCCTTAGCATCTaGGCTGCAGCAGCTGAAGGA | + |
Preference number: 2 (lower is better) Translates to: LCRRKANWGQCLLLPYFCRCLSI*AAAAEG Trigger: TCCTTCAGCTGCTGCAGCTCAGATGCTAAGGCACCG...ACAGAAGTAAGGAAGCAAGAGGCACTGTCCCCAGTTGGCTTTTCTTCTACAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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3UTR-3UTR TCA 90 bp | CTTATTGAATTATATATGTCCATTCCGTTCTGTCTGCTCAGCGTCCAGGACCCCCGGTGCCTTAGCATCTaGGCTGCAGCAGCTGAAGGA | + |
Preference number: 2 (lower is better) Translates to: LIELYMSIPFCLLSVQDPRCLSI*AAAAEG Trigger: TCCTTCAGCTGCTGCAGCTCAGATGCTAAGGCACCG...GGGGTCCTGGACGCTGAGCAGACAGAACGGAATGGACATATATAATTCAATAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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3UTR-3UTR TCA 90 bp | CTTATTGAATTATATATGTCCATTCCGTTCTGTCTGCTCAGCGTCCAGGACCCCCACATCCAGCTGCAGTaGGGCACAGGATGGAGCAGA | + |
Preference number: 2 (lower is better) Translates to: LIELYMSIPFCLLSVQDPHIQLQ*GTGWSR Trigger: TCTGCTCCATCCTGTGCCTCACTGCAGCTGGATGTG...GGGGTCCTGGACGCTGAGCAGACAGAACGGAATGGACATATATAATTCAATAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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3UTR-3UTR TCA 90 bp | TTCTGTCCTTCCTGGGGATTTCTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTATCCCATGTCACTTTCTaGATCCTCAGCACTCCGGGT | + |
Preference number: 2 (lower is better) Translates to: FCPSWGFLPRARKWVVRLSHVTF*ILSTPG Trigger: ACCCGGAGTGCTGAGGATTCAGAAAGTGACATGGGA...TAATCTTACTACCCACTTTCTGGCCCTGGGGAGAAATCCCCAGGAAGGACAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190646.7 |
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3UTR-3UTR GCA 90 bp | ACTTTAGGGATGCGGAGCTTCTCTTGGGTGTCTCCAGGTATAGGTTTCCTGTTGAGGTACCTCCCTTCCTaGACGAGACTCCCATTCTTC | + |
Preference number: 2 (lower is better) Translates to: TLGMRSFSWVSPGIGFLLRYLPS*TRLPFF Trigger: GAAGAATGGGAGTCTCGTGCAGGAAGGGAGGTACCT...CAACAGGAAACCTATACCTGGAGACACCCAAGAGAAGCTCCGCATCCCTAAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
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3UTR-3UTR CCA 90 bp | GACCCCCGAGGGAAGGCACCATCTCCACAGAAGGTCCAACATCTTTGTAGAAGACCCAGGGCCAGAAAGTaGGTAGTAAGATTAGTGAAC | + |
Preference number: 2 (lower is better) Translates to: DPRGKAPSPQKVQHLCRRPRARK*VVRLVN Trigger: GTTCACTAATCTTACTACCCACTTTCTGGCCCTGGG...TCTTCTACAAAGATGTTGGACCTTCTGTGGAGATGGTGCCTTCCCTCGGGGGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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3UTR-3UTR CCA 90 bp | TTCTGGATTTTCATCCCCCAGATGGCCAGGATGCAGATAGTCAGGCAGAAGCCTACTTTGGAGGAGTGCTaGACTTGGCACTTCACACTC | + |
Preference number: 2 (lower is better) Translates to: FWIFIPQMARMQIVRQKPTLEEC*TWHFTL Trigger: GAGTGTGAAGTGCCAAGTCCAGCACTCCTCCAAAGT...AGGCTTCTGCCTGACTATCTGCATCCTGGCCATCTGGGGGATGAAAATCCAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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3UTR-3UTR TCA 90 bp | ACTTTAGGGATGCGGAGCTTCTCTTGGGTGTCTCCAGGTATAGGTTTCCTGTTGTTAGGCTCAAGAACCTaGAACAGCAGCTGCTACCCA | + |
Preference number: 2 (lower is better) Translates to: TLGMRSFSWVSPGIGFLLLGSRT*NSSCYP Trigger: TGGGTAGCAGCTGCTGTTTCAGGTTCTTGAGCCTAA...CAACAGGAAACCTATACCTGGAGACACCCAAGAGAAGCTCCGCATCCCTAAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
||
3UTR-3UTR CCA 90 bp | CTTATTGAATTATATATGTCCATTCCGTTCTGTCTGCTCAGCGTCCAGGACCCCTACTTCTGTCCTTCCTaGGGATTTCTCCCCAGGGCC | + |
Preference number: 2 (lower is better) Translates to: LIELYMSIPFCLLSVQDPYFCPS*GFLPRA Trigger: GGCCCTGGGGAGAAATCCCCAGGAAGGACAGAAGTA...GGGGTCCTGGACGCTGAGCAGACAGAACGGAATGGACATATATAATTCAATAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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3UTR-3UTR CCA 90 bp | GGGTTGCTGCTGTTAACCCGGCATGTCATGGTCACAGAATTGTTCTTTTCCACCATGCGGAGCTTCTCTTaGGTGTCTCCAGGTATAGGT | + |
Preference number: 2 (lower is better) Translates to: GLLLLTRHVMVTELFFSTMRSFS*VSPGIG Trigger: ACCTATACCTGGAGACACCCAAGAGAAGCTCCGCAT...GGTGGAAAAGAACAATTCTGTGACCATGACATGCCGGGTTAACAGCAGCAACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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3UTR CAA 90 bp | GAAAGGTACAGCTCAGACTCTGGGTCCTTCTCAGTCTTTGTGGCGTaGTACAGGACAGTTCCTGTGAATTTCTTGGTGGCCTTGTCAAAC | + |
Preference number: 2 (lower is better) Translates to: ERYSSDSGSFSVFVA*YRTVPVNFLVALSN Trigger: GTTTGACAAGGCCACCAAGAAATTCACAGGAACTGTCCTGTACAACGCCACAAAGACTGAGAAGGACCCAGAGTCTGAGCTGTACCTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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3UTR CAA 90 bp | CTGGACTTGGCACTTCACACTCTTTCCGTGGTCCGTCCACTTTGGTaGGAAGGTGAGCTTGCTCTCTGTATAGACATTCTTAATGGAGGA | + |
Preference number: 2 (lower is better) Translates to: LDLALHTLSVVRPLW*EGELALCIDILNGG Trigger: TCCTCCATTAAGAATGTCTATACAGAGAGCAAGCTCACCTTCCAACCAAAGTGGACGGACCACGGAAAGAGTGTGAAGTGCCAAGTCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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3UTR CAA 90 bp | CGGCATGTCATGGTCACAGAATTGTTCTTTTCCACCTCTGTGGGATaGACCTTGATCTCCAGCTTCGGGGTATACTTAACATCCAGACGC | + |
Preference number: 2 (lower is better) Translates to: RHVMVTELFFSTSVG*TLISSFGVYLTSRR Trigger: GCGTCTGGATGTTAAGTATACCCCGAAGCTGGAGATCAAGGTCAATCCCACAGAGGTGGAAAAGAACAATTCTGTGACCATGACATGCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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3UTR CAA 90 bp | AGTTTCGGGTTGCTGCTGTTAACCCGGCATGTCATGGTCACAGAATaGTTCTTTTCCACCTCTGTGGGATTGACCTTGATCTCCAGCTTC | + |
Preference number: 2 (lower is better) Translates to: SFGLLLLTRHVMVTE*FFSTSVGLTLISSF Trigger: GAAGCTGGAGATCAAGGTCAATCCCACAGAGGTGGAAAAGAACAATTCTGTGACCATGACATGCCGGGTTAACAGCAGCAACCCGAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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3UTR CAA 90 bp | CCTATGTCGTTGGAAGCCTGGCACCGGTATTTCCCTCTCATGTCCTaGGTCACTGAATGCAGAATTAGCTTGGACATCTGTTGTTCCTGT | + |
Preference number: 2 (lower is better) Translates to: PMSLEAWHRYFPLMS*VTECRISLDICCSC Trigger: ACAGGAACAACAGATGTCCAAGCTAATTCTGCATTCAGTGACCAAGGACATGAGAGGGAAATACCGGTGCCAGGCTTCCAACGACATAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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3UTR-3UTR TCA 90 bp | GCAGCTGAAGGAGTTGTCTTCTTTAGGCTCAAGAACCTGAAACAGCAGCTGCTATTAGGCTCAAGAACCTaGAACAGCAGCTGCTACCCA | + |
Preference number: 2 (lower is better) Translates to: AAEGVVFFRLKNLKQQLLLGSRT*NSSCYP Trigger: TGGGTAGCAGCTGCTGTTTCAGGTTCTTGAGCCTAA...TAGCAGCTGCTGTTTCAGGTTCTTGAGCCTAAAGAAGACAACTCCTTCAGCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000187989.7 ENSMUST00000189718.7 ENSMUST00000190617.7 ENSMUST00000190646.7 |
||
3UTR-3UTR TCA 90 bp | GTAGAAGAAAAGCCAACTGGGGACAGTGCCTCTTGCTTCCTTACTTCTGTCCTTTTAGGCTCAAGAACCTaGAACAGCAGCTGCTACCCA | + |
Preference number: 2 (lower is better) Translates to: VEEKPTGDSASCFLTSVLLGSRT*NSSCYP Trigger: TGGGTAGCAGCTGCTGTTTCAGGTTCTTGAGCCTAA...AAGGACAGAAGTAAGGAAGCAAGAGGCACTGTCCCCAGTTGGCTTTTCTTCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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3UTR-3UTR TCA 90 bp | CGGGGTAGAGTATCAAGGGGTCAGAGAAGAAGTGTTAGTGACGATTACAACAGGAATACAGGGTTTCCTTaGAAAACCCTGGCTGTCCTG | + |
Preference number: 2 (lower is better) Translates to: RGRVSRGQRRSVSDDYNRNTGFP*KTLAVL Trigger: CAGGACAGCCAGGGTTTTTCAAGGAAACCCTGTATT...CCTGTTGTAATCGTCACTAACACTTCTTCTCTGACCCCTTGATACTCTACCCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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3UTR-3UTR GCA 90 bp | CTTTGTAGAAGAAAAGCCAACTGGGGACAGTGCCTCTTGCTTCCTTACTTCTGTGGGGACAGTGCCTCTTaGTTCCTTACTTCTGTCCTT | + |
Preference number: 2 (lower is better) Translates to: LCRRKANWGQCLLLPYFCGDSAS*FLTSVL Trigger: AAGGACAGAAGTAAGGAAGCAAGAGGCACTGTCCCC...ACAGAAGTAAGGAAGCAAGAGGCACTGTCCCCAGTTGGCTTTTCTTCTACAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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3UTR-3UTR GCA 90 bp | CTTTGTAGAAGAAAAGCCAACTGGGGACAGTGCCTCTTGCTTCCTTACTTCTGTACCCAGACGGTTCTCTaGCAAGCAAGAGTAATTCCC | + |
Preference number: 2 (lower is better) Translates to: LCRRKANWGQCLLLPYFCTQTVL*QARVIP Trigger: GGGAATTACTCTTGCTTGGCAGAGAACCGTCTGGGT...ACAGAAGTAAGGAAGCAAGAGGCACTGTCCCCAGTTGGCTTTTCTTCTACAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190646.7 |
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3UTR-3UTR CCA 90 bp | CGGGGTAGAGTATCAAGGGGTCAGAGAAGAAGTGTTAGTGACGATTACAACAGGCCCAGGGCCAGAAAGTaGGTAGTAAGATTAGTGAAC | + |
Preference number: 2 (lower is better) Translates to: RGRVSRGQRRSVSDDYNRPRARK*VVRLVN Trigger: GTTCACTAATCTTACTACCCACTTTCTGGCCCTGGG...CCTGTTGTAATCGTCACTAACACTTCTTCTCTGACCCCTTGATACTCTACCCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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3UTR-3UTR CCA 90 bp | GTAGAAGAAAAGCCAACTGGGGACAGTGCCTCTTGCTTCCTTACTTCTGTCCTTCCCAGGGCCAGAAAGTaGGTAGTAAGATTAGTGAAC | + |
Preference number: 2 (lower is better) Translates to: VEEKPTGDSASCFLTSVLPRARK*VVRLVN Trigger: GTTCACTAATCTTACTACCCACTTTCTGGCCCTGGG...AAGGACAGAAGTAAGGAAGCAAGAGGCACTGTCCCCAGTTGGCTTTTCTTCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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3UTR-3UTR CCA 90 bp | TCCAGTGTTGTGCGTGTCACTCTCTGGAAAGCGCAAGATGGCATAACTAACGGTTTGTTGCACTTGGACTaGCCAGTGACTCACAAATCA | + |
Preference number: 2 (lower is better) Translates to: SSVVRVTLWKAQDGITNGLLHLD*PVTHKS Trigger: TGATTTGTGAGTCACTGGCCAGTCCAAGTGCAACAA...ACCGTTAGTTATGCCATCTTGCGCTTTCCAGAGAGTGACACGCACAACACTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
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3UTR CAA 90 bp | TTCCCACTGTCATTGGCACGTATCGGGTGGATTTTCAGGGTACAATaGTCTATTCTGTTCCCCAGAAATGTTACTCTCCCTTGCTTAGAA | + |
Preference number: 2 (lower is better) Translates to: FPLSLARIGWIFRVQ*SILFPRNVTLPCLE Trigger: TTCTAAGCAAGGGAGAGTAACATTTCTGGGGAACAGAATAGACAATTGTACCCTGAAAATCCACCCGATACGTGCCAATGACAGTGGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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3UTR-3UTR CAA 90 bp | AGCGTCCAGGACCCCCGAGGGAAGGCACCATCTCCACAGAAGGTCCAACATCTTGGTGGGTGCCTGGGGTaGGAGAAGCAGACGTGGCAC | + |
Preference number: 3 (lower is better) Translates to: SVQDPRGKAPSPQKVQHLGGCLG*EKQTWH Trigger: GTGCCACGTCTGCTTCTCCAACCCCAGGCACCCACC...AAGATGTTGGACCTTCTGTGGAGATGGTGCCTTCCCTCGGGGGTCCTGGACGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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3UTR TCA 72 bp | TGCCTGGGGTTGGAGAAGCAGACGTGGCACAATGCGTaGGGGAGGATCACCAGCCAGAGAAGGCCGGTCAGG | + |
Preference number: 3 (lower is better) Translates to: CLGLEKQTWHNA*GRITSQRRPVR Trigger: CCTGACCGGCCTTCTCTGGCTGGTGATCCTCCCTCACGCATTGTGCCACGTCTGCTTCTCCAACCCCAGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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3UTR TCA 72 bp | TGGCCTTCTTCCCCTCCATCACATGGTCCCCAGGGCTaGTGGACACACGCAGCCTCCGAGGAGCATACAGCA | + |
Preference number: 3 (lower is better) Translates to: WPSSPPSHGPQG*WTHAASEEHTA Trigger: TGCTGTATGCTCCTCGGAGGCTGCGTGTGTCCATCAGCCCTGGGGACCATGTGATGGAGGGGAAGAAGGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
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3UTR CCA 72 bp | TCACAGGACAAGGTGGCCTTCTTCCCCTCCATCACATaGTCCCCAGGGCTGATGGACACACGCAGCCTCCGA | + |
Preference number: 3 (lower is better) Translates to: SQDKVAFFPSIT*SPGLMDTRSLR Trigger: TCGGAGGCTGCGTGTGTCCATCAGCCCTGGGGACCATGTGATGGAGGGGAAGAAGGCCACCTTGTCCTGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
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3UTR-3UTR CAA 90 bp | GTCAGGCAGAAGCCTAGTCCCAAGGCGACCCGCTTGCCGATGGTCTCTGGACTGCACGAACACTTGTGGTaGCAGGCAGCACAGCTGACA | + |
Preference number: 3 (lower is better) Translates to: VRQKPSPKATRLPMVSGLHEHLW*QAAQLT Trigger: TGTCAGCTGTGCTGCCTGCAACCACAAGTGTTCGTG...CAGTCCAGAGACCATCGGCAAGCGGGTCGCCTTGGGACTAGGCTTCTGCCTGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
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3UTR TCA 72 bp | CCCGCTTGCCGATGGTCTCTGGACTGTAGTAGACAGTaGGGGTGCTGGGTGGTGACTCTCCTGTGCCTATCC | + |
Preference number: 3 (lower is better) Translates to: PACRWSLDCSRQ*GCWVVTLLCLS Trigger: GGATAGGCACAGGAGAGTCACCACCCAGCACCCTCACTGTCTACTACAGTCCAGAGACCATCGGCAAGCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
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3UTR-3UTR CAA 90 bp | GACGATTACAACAGGAACACATCCAGCTGCAGTGAGGCACAGGATGGAGCAGATGGTGGGTGCCTGGGGTaGGAGAAGCAGACGTGGCAC | + |
Preference number: 3 (lower is better) Translates to: DDYNRNTSSCSEAQDGADGGCLG*EKQTWH Trigger: GTGCCACGTCTGCTTCTCCAACCCCAGGCACCCACC...ATCTGCTCCATCCTGTGCCTCACTGCAGCTGGATGTGTTCCTGTTGTAATCGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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3UTR-3UTR CAA 90 bp | CGAGGAGCATACAGCACTTGGAGGTTCCAGGCCTGTGACAAGGTCTCTCCGATGCTCAGCACTCCGGGTTaGAGCACACTCCCAGAACCT | + |
Preference number: 3 (lower is better) Translates to: RGAYSTWRFQACDKVSPMLSTPG*STLPEP Trigger: AGGTTCTGGGAGTGTGCTCAAACCCGGAGTGCTGAG...CATCGGAGAGACCTTGTCACAGGCCTGGAACCTCCAAGTGCTGTATGCTCCTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
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3UTR CCA 72 bp | ATGGACACACGCAGCCTCCGAGGAGCATACAGCACTTaGAGGTTCCAGGCCTGTGACAAGGTCTCTCCGATG | + |
Preference number: 3 (lower is better) Translates to: MDTRSLRGAYST*RFQACDKVSPM Trigger: CATCGGAGAGACCTTGTCACAGGCCTGGAACCTCCAAGTGCTGTATGCTCCTCGGAGGCTGCGTGTGTCCAT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
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3UTR CCA 72 bp | GTGTGTTGGACCTCCAGGGGTTCCAGTCTCAGTTTCTaGCCTGAGGAGTGGAGGTCTTGGCCACTGGAGTCA | + |
Preference number: 3 (lower is better) Translates to: VCWTSRGSSLSF*PEEWRSWPLES Trigger: TGACTCCAGTGGCCAAGACCTCCACTCCTCAGGCCAGAAACTGAGACTGGAACCCCTGGAGGTCCAACACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
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3UTR CCA 72 bp | CGAGTCGCTGTTGTTTGGAGGAGGAGCCTGTGTTGCTaGGGTCCCTGCATCTCCAGTGTTGTGCGTGTCACT | + |
Preference number: 3 (lower is better) Translates to: RVAVVWRRSLCC*GPCISSVVRVT Trigger: AGTGACACGCACAACACTGGAGATGCAGGGACCCCAGCAACACAGGCTCCTCCTCCAAACAACAGCGACTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
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3UTR-3UTR CAA 90 bp | AGCGTCCAGGACCCCCGAGGGAAGGCACCATCTCCACAGAAGGTCCAACATCTTTGGGGACAGTGCCTCTaGCTTCCTTACTTCTGTCCT | + |
Preference number: 3 (lower is better) Translates to: SVQDPRGKAPSPQKVQHLWGQCL*LPYFCP Trigger: AGGACAGAAGTAAGGAAGCAAGAGGCACTGTCCCCA...AAGATGTTGGACCTTCTGTGGAGATGGTGCCTTCCCTCGGGGGTCCTGGACGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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3UTR-3UTR CAA 90 bp | CCTGGGGTTGGAGAAGCAGACGTGGCACAATGCGTGAGGGAGGATCACCAGCCATGTAGTTTGTTGCACTaGGACTGGCCAGTGACTCAC | + |
Preference number: 3 (lower is better) Translates to: PGVGEADVAQCVREDHQPCSLLH*DWPVTH Trigger: GTGAGTCACTGGCCAGTCCAAGTGCAACAAACTACA...TGGCTGGTGATCCTCCCTCACGCATTGTGCCACGTCTGCTTCTCCAACCCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190646.7 |
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3UTR TCA 72 bp | TTGGACCTCCAGGGGTTCCAGTCTCAGTTTCTGGCCTaGGGAGTGGAGGTCTTGGCCACTGGAGTCAAACCA | + |
Preference number: 3 (lower is better) Translates to: LDLQGFQSQFLA*GVEVLATGVKP Trigger: TGGTTTGACTCCAGTGGCCAAGACCTCCACTCCTCAGGCCAGAAACTGAGACTGGAACCCCTGGAGGTCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
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3UTR GCA 72 bp | CATTCTTCTTCCAGAAGAAGCGGACCTCTGCCGGGTTaGTCTCTGCGAAGTCGCATTGGAGGAGGACACGCT | + |
Preference number: 3 (lower is better) Translates to: HSSSRRSGPLPG*SLRSRIGGGHA Trigger: AGCGTGTCCTCCTCCAATGCGACTTCGCAGAGAGCAACCCGGCAGAGGTCCGCTTCTTCTGGAAGAAGAATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
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3UTR GCA 72 bp | GAGACTCCCATTCTTCTTCCAGAAGAAGCGGACCTCTaGCGGGTTGCTCTCTGCGAAGTCGCATTGGAGGAG | + |
Preference number: 3 (lower is better) Translates to: ETPILLPEEADL*RVALCEVALEE Trigger: CTCCTCCAATGCGACTTCGCAGAGAGCAACCCGGCAGAGGTCCGCTTCTTCTGGAAGAAGAATGGGAGTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
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3UTR CCA 72 bp | ACATTCAGGATGACAGGGAGGGCCCACGAACACTTGTaGTTGCAGGCAGCACAGCTGACAGGCATGGAATCC | + |
Preference number: 3 (lower is better) Translates to: TFRMTGRAHEHL*LQAAQLTGMES Trigger: GGATTCCATGCCTGTCAGCTGTGCTGCCTGCAACCACAAGTGTTCGTGGGCCCTCCCTGTCATCCTGAATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
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3UTR TCA 72 bp | GGGCCCACGAACACTTGTGGTTGCAGGCAGCACAGCTaGCAGGCATGGAATCCCATGTCACTTTCTGAATCC | + |
Preference number: 3 (lower is better) Translates to: GPTNTCGCRQHS*QAWNPMSLSES Trigger: GGATTCAGAAAGTGACATGGGATTCCATGCCTGTCAGCTGTGCTGCCTGCAACCACAAGTGTTCGTGGGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
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3UTR TCA 72 bp | CCGAGGAGCATACAGCACTTGGAGGTTCCAGGCCTGTaGCAAGGTCTCTCCGATGGAGTTGTTGACCATGCA | + |
Preference number: 3 (lower is better) Translates to: PRSIQHLEVPGL*QGLSDGVVDHA Trigger: TGCATGGTCAACAACTCCATCGGAGAGACCTTGTCACAGGCCTGGAACCTCCAAGTGCTGTATGCTCCTCGG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
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3UTR TCA 72 bp | CTCTGGACTGTAGTAGACAGTGAGGGTGCTGGGTGGTaGCTCTCCTGTGCCTATCCCATTGGTCCCTTTGCA | + |
Preference number: 3 (lower is better) Translates to: LWTVVDSEGAGW*LSCAYPIGPFA Trigger: TGCAAAGGGACCAATGGGATAGGCACAGGAGAGTCACCACCCAGCACCCTCACTGTCTACTACAGTCCAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
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3UTR TCA 72 bp | TGTGAACCCTGGAGGGTTCTGGAGCATAGTGCACCGTaGGTTCCACTTCTTCCGACTCTCCTGGGCCTATGT | + |
Preference number: 3 (lower is better) Translates to: CEPWRVLEHSAP*VPLLPTLLGLC Trigger: ACATAGGCCCAGGAGAGTCGGAAGAAGTGGAACTCACGGTGCACTATGCTCCAGAACCCTCCAGGGTTCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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3UTR CCA 72 bp | CTTGGCCACTGGAGTCAAACCAGGTGTACTGTGAGATaGGCGGATTGGCATCACTCTCACAGGACAAGGTGG | + |
Preference number: 3 (lower is better) Translates to: LGHWSQTRCTVR*ADWHHSHRTRW Trigger: CCACCTTGTCCTGTGAGAGTGATGCCAATCCGCCCATCTCACAGTACACCTGGTTTGACTCCAGTGGCCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
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3UTR CCA 72 bp | ATGCAGGCTCCCTCCCAGGCAAAGAGGGTTTGGGGATaGTCAACGGTCCAATCATTTGCTGAGCTGTACCGA | + |
Preference number: 3 (lower is better) Translates to: MQAPSQAKRVWG*STVQSFAELYR Trigger: TCGGTACAGCTCAGCAAATGATTGGACCGTTGACCATCCCCAAACCCTCTTTGCCTGGGAGGGAGCCTGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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3UTR CCA 72 bp | TCTTCCGACTCTCCTGGGCCTATGTCGTTGGAAGCCTaGCACCGGTATTTCCCTCTCATGTCCTTGGTCACT | + |
Preference number: 3 (lower is better) Translates to: SSDSPGPMSLEA*HRYFPLMSLVT Trigger: AGTGACCAAGGACATGAGAGGGAAATACCGGTGCCAGGCTTCCAACGACATAGGCCCAGGAGAGTCGGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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3UTR-3UTR CAA 90 bp | ATGGAGCAGATGGTGGTGGGTGCCTGGGGTTGGAGAAGCAGACGTGGCACAATGCAATACAGGGTTTCCTaGAAAAACCCTGGCTGTCCT | + |
Preference number: 3 (lower is better) Translates to: MEQMVVGAWGWRSRRGTMQYRVS*KNPGCP Trigger: AGGACAGCCAGGGTTTTTCAAGGAAACCCTGTATTG...CATTGTGCCACGTCTGCTTCTCCAACCCCAGGCACCCACCACCATCTGCTCCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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3UTR-3UTR CAA 90 bp | CTTTGTAGAAGAAAAGCCAACTGGGGACAGTGCCTCTTGCTTCCTTACTTCTGTGGTGGGTGCCTGGGGTaGGAGAAGCAGACGTGGCAC | + |
Preference number: 3 (lower is better) Translates to: LCRRKANWGQCLLLPYFCGGCLG*EKQTWH Trigger: GTGCCACGTCTGCTTCTCCAACCCCAGGCACCCACC...ACAGAAGTAAGGAAGCAAGAGGCACTGTCCCCAGTTGGCTTTTCTTCTACAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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3UTR TCA 72 bp | GAGGTCTTGGCCACTGGAGTCAAACCAGGTGTACTGTaGGATGGGCGGATTGGCATCACTCTCACAGGACAA | + |
Preference number: 3 (lower is better) Translates to: EVLATGVKPGVL*DGRIGITLTGQ Trigger: TTGTCCTGTGAGAGTGATGCCAATCCGCCCATCTCACAGTACACCTGGTTTGACTCCAGTGGCCAAGACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
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3UTR TCA 72 bp | GAACCTGAAACAGCAGCTGCTACCCACCTCAGTGCTTaGGGGTCACATAGTCTACGTCTTCCTTTGCCTGGG | + |
Preference number: 3 (lower is better) Translates to: EPETAAATHLSA*GSHSLRLPLPG Trigger: CCCAGGCAAAGGAAGACGTAGACTATGTGACCCTCAAGCACTGAGGTGGGTAGCAGCTGCTGTTTCAGGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
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3UTR TCA 72 bp | CCTTGGGTAGTGGAGTTTTGTACTTGCAAGGAATCCTaGTGCAGGCTCCCTCCCAGGCAAAGAGGGTTTGGG | + |
Preference number: 3 (lower is better) Translates to: PWVVEFCTCKES*CRLPPRQRGFG Trigger: CCCAAACCCTCTTTGCCTGGGAGGGAGCCTGCATCAGGATTCCTTGCAAGTACAAAACTCCACTACCCAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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3UTR TCA 72 bp | CGGGGTATACTTAACATCCAGACGCACAGTGCGCTCTaGGAGCACTTTGGAGGAGTGCTGGACTTGGCACTT | + |
Preference number: 3 (lower is better) Translates to: RGILNIQTHSAL*EHFGGVLDLAL Trigger: AAGTGCCAAGTCCAGCACTCCTCCAAAGTGCTCTCAGAGCGCACTGTGCGTCTGGATGTTAAGTATACCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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3UTR CCA 72 bp | TGGAGTCAAACCAGGTGTACTGTGAGATGGGCGGATTaGCATCACTCTCACAGGACAAGGTGGCCTTCTTCC | + |
Preference number: 3 (lower is better) Translates to: WSQTRCTVRWAD*HHSHRTRWPSS Trigger: GGAAGAAGGCCACCTTGTCCTGTGAGAGTGATGCCAATCCGCCCATCTCACAGTACACCTGGTTTGACTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
||
3UTR CCA 72 bp | TCCAGTCTCAGTTTCTGGCCTGAGGAGTGGAGGTCTTaGCCACTGGAGTCAAACCAGGTGTACTGTGAGATG | + |
Preference number: 3 (lower is better) Translates to: SSLSFWPEEWRS*PLESNQVYCEM Trigger: CATCTCACAGTACACCTGGTTTGACTCCAGTGGCCAAGACCTCCACTCCTCAGGCCAGAAACTGAGACTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
||
3UTR-3UTR CAA 90 bp | GGTAGTAAGATTAGTGAACGGGGTAGAGTATCAAGGGGTCAGAGAAGAAGTGTTGGTGGGTGCCTGGGGTaGGAGAAGCAGACGTGGCAC | + |
Preference number: 3 (lower is better) Translates to: GSKISERGRVSRGQRRSVGGCLG*EKQTWH Trigger: GTGCCACGTCTGCTTCTCCAACCCCAGGCACCCACC...AACACTTCTTCTCTGACCCCTTGATACTCTACCCCGTTCACTAATCTTACTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
||
3UTR-3UTR CAA 90 bp | TTATATATGTCCATTCCGTTCTGTCTGCTCAGCGTCCAGGACCCCCGAGGGAAGTGGGGACAGTGCCTCTaGCTTCCTTACTTCTGTCCT | + |
Preference number: 3 (lower is better) Translates to: LYMSIPFCLLSVQDPRGKWGQCL*LPYFCP Trigger: AGGACAGAAGTAAGGAAGCAAGAGGCACTGTCCCCA...CTTCCCTCGGGGGTCCTGGACGCTGAGCAGACAGAACGGAATGGACATATATAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
||
3UTR TCA 72 bp | CACTCCCAGAACCTTGAGGGTTCCATCTGTAGGAGGTaGCGTCTGGATTGCTGGAGTTGTACCTACAGACCA | + |
Preference number: 3 (lower is better) Translates to: HSQNLEGSICRR*RLDCWSCTYRP Trigger: TGGTCTGTAGGTACAACTCCAGCAATCCAGACGTCACCTCCTACAGATGGAACCCTCAAGGTTCTGGGAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
||
3UTR TCA 72 bp | CCCATGTCACTTTCTGAATCCTCAGCACTCCGGGTTTaGGCACACTCCCAGAACCTTGAGGGTTCCATCTGT | + |
Preference number: 3 (lower is better) Translates to: PMSLSESSALRV*AHSQNLEGSIC Trigger: ACAGATGGAACCCTCAAGGTTCTGGGAGTGTGCTCAAACCCGGAGTGCTGAGGATTCAGAAAGTGACATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
||
3UTR GCA 72 bp | AAAGCGCAAGATGGCATAACTAACGGTGTCATCCATTaGCGGATTGTAGCATCCCTGGGATTGGGGGCCTTC | + |
Preference number: 3 (lower is better) Translates to: KAQDGITNGVIH*RIVASLGLGAF Trigger: GAAGGCCCCCAATCCCAGGGATGCTACAATCCGGCAATGGATGACACCGTTAGTTATGCCATCTTGCGCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
||
3UTR GCA 72 bp | TACCAGCCCCAAACTGAACCAGCTCTGAGTAATGGATaGTCTCATCCTCCGGGCAGCTCGGATTCACATTCT | + |
Preference number: 3 (lower is better) Translates to: YQPQTEPALSNG*SHPPGSSDSHS Trigger: AGAATGTGAATCCGAGCTGCCCGGAGGATGAGAGCATCCATTACTCAGAGCTGGTTCAGTTTGGGGCTGGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
||
3UTR-3UTR CAA 90 bp | GTAGAGTATCAAGGGGTCAGAGAAGAAGTGTTAGTGACGATTACAACAGGAACAGGTGGGTGCCTGGGGTaGGAGAAGCAGACGTGGCAC | + |
Preference number: 3 (lower is better) Translates to: VEYQGVREEVLVTITTGTGGCLG*EKQTWH Trigger: GTGCCACGTCTGCTTCTCCAACCCCAGGCACCCACC...TGTTCCTGTTGTAATCGTCACTAACACTTCTTCTCTGACCCCTTGATACTCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
||
3UTR-3UTR CAA 90 bp | GCAGCTGAAGGAGTTGTCTTCTTTAGGCTCAAGAACCTGAAACAGCAGCTGCTAGTGACCGAGTCGCTGTaGTTTGGAGGAGGAGCCTGT | + |
Preference number: 3 (lower is better) Translates to: AAEGVVFFRLKNLKQQLLVTESL*FGGGAC Trigger: ACAGGCTCCTCCTCCAAACAACAGCGACTCGGTCAC...TAGCAGCTGCTGTTTCAGGTTCTTGAGCCTAAAGAAGACAACTCCTTCAGCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
||
3UTR-3UTR CAA 90 bp | ATTCAGGATGACAGGGAGGGCCCACGAACACTTGTGGTTGCAGGCAGCACAGCTTTGGGTAGTGGAGTTTaGTACTTGCAAGGAATCCTG | + |
Preference number: 3 (lower is better) Translates to: IQDDREGPRTLVVAGSTALGSGV*YLQGIL Trigger: CAGGATTCCTTGCAAGTACAAAACTCCACTACCCAA...AGCTGTGCTGCCTGCAACCACAAGTGTTCGTGGGCCCTCCCTGTCATCCTGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
||
3UTR-3UTR CAA 90 bp | TCCTTACTTCTGTCCTTCCTGGGGATTTCTCCCCAGGGCCAGAAAGTGGGTAGTCAGCAGCTGAAGGAGTaGTCTTCTTTAGGCTCAAGA | + |
Preference number: 3 (lower is better) Translates to: SLLLSFLGISPQGQKVGSQQLKE*SSLGSR Trigger: TCTTGAGCCTAAAGAAGACAACTCCTTCAGCTGCTG...ACTACCCACTTTCTGGCCCTGGGGAGAAATCCCCAGGAAGGACAGAAGTAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
||
3UTR-3UTR CAA 90 bp | TCCTTACTTCTGTCCTTCCTGGGGATTTCTCCCCAGGGCCAGAAAGTGGGTAGTCAATACAGGGTTTCCTaGAAAAACCCTGGCTGTCCT | + |
Preference number: 3 (lower is better) Translates to: SLLLSFLGISPQGQKVGSQYRVS*KNPGCP Trigger: AGGACAGCCAGGGTTTTTCAAGGAAACCCTGTATTG...ACTACCCACTTTCTGGCCCTGGGGAGAAATCCCCAGGAAGGACAGAAGTAAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
||
3UTR-3UTR CAA 90 bp | CCCGAGGGAAGGCACCATCTCCACAGAAGGTCCAACATCTTTGTAGAAGAAAAGTGGGGACAGTGCCTCTaGCTTCCTTACTTCTGTCCT | + |
Preference number: 3 (lower is better) Translates to: PEGRHHLHRRSNIFVEEKWGQCL*LPYFCP Trigger: AGGACAGAAGTAAGGAAGCAAGAGGCACTGTCCCCA...CTTTTCTTCTACAAAGATGTTGGACCTTCTGTGGAGATGGTGCCTTCCCTCGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
||
3UTR-3UTR CAA 90 bp | TCCAGTGTTGTGCGTGTCACTCTCTGGAAAGCGCAAGATGGCATAACTAACGGTACCAGGTGTAGTTTGTaGCACTTGGACTGGCCAGTG | + |
Preference number: 3 (lower is better) Translates to: SSVVRVTLWKAQDGITNGTRCSL*HLDWPV Trigger: CACTGGCCAGTCCAAGTGCAACAAACTACACCTGGT...ACCGTTAGTTATGCCATCTTGCGCTTTCCAGAGAGTGACACGCACAACACTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
||
3UTR-3UTR CAA 90 bp | GAAGTGTTAGTGACGATTACAACAGGAACACATCCAGCTGCAGTGAGGCACAGGACCAGGTGTAGTTTGTaGCACTTGGACTGGCCAGTG | + |
Preference number: 3 (lower is better) Translates to: EVLVTITTGTHPAAVRHRTRCSL*HLDWPV Trigger: CACTGGCCAGTCCAAGTGCAACAAACTACACCTGGT...CCTGTGCCTCACTGCAGCTGGATGTGTTCCTGTTGTAATCGTCACTAACACTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190646.7 |
||
3UTR TCA 72 bp | CAGCTGAAGGAGTTGTCTTCTTTAGGCTCAAGAACCTaGAACAGCAGCTGCTACCCACCTCAGTGCTTGAGG | + |
Preference number: 3 (lower is better) Translates to: QLKELSSLGSRT*NSSCYPPQCLR Trigger: CCTCAAGCACTGAGGTGGGTAGCAGCTGCTGTTTCAGGTTCTTGAGCCTAAAGAAGACAACTCCTTCAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
||
3UTR TCA 72 bp | TCTGGATGTAAGGTTGGAACGGTTTCTCCGAGACATTaGGGTGAATGGGCTCCATCCATCGTTCAGTCCCTG | + |
Preference number: 3 (lower is better) Translates to: SGCKVGTVSPRH*GEWAPSIVQSL Trigger: CAGGGACTGAACGATGGATGGAGCCCATTCACCTCAATGTCTCGGAGAAACCGTTCCAACCTTACATCCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
||
3UTR TCA 72 bp | ATTAGCTTGGACATCTGTTGTTCCTGTTCCAGTTCCTaGTCCTCTAGGGGGCGCCCATCCTTGAACCAAGAC | + |
Preference number: 3 (lower is better) Translates to: ISLDICCSCSSS*SSRGRPSLNQD Trigger: GTCTTGGTTCAAGGATGGGCGCCCCCTAGAGGATCAGGAACTGGAACAGGAACAACAGATGTCCAAGCTAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
||
3UTR CCA 72 bp | ATTATCATCAAGGCAGGAGGATGGCAGCATCCAGGTTaGCATGGTGCAGGAGGAGCTGAGAGTTCTACATCT | + |
Preference number: 3 (lower is better) Translates to: IIIKAGGWQHPG*HGAGGAESSTS Trigger: AGATGTAGAACTCTCAGCTCCTCCTGCACCATGCCAACCTGGATGCTGCCATCCTCCTGCCTTGATGATAAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019248.13 |
||
3UTR-3UTR CAA 90 bp | GGATTTCTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTAGTGAACGGGGTAGAGCAGCAGCTGAAGGAGTaGTCTTCTTTAGGCTCAAGA | + |
Preference number: 3 (lower is better) Translates to: GFLPRARKWVVRLVNGVEQQLKE*SSLGSR Trigger: TCTTGAGCCTAAAGAAGACAACTCCTTCAGCTGCTG...CTCTACCCCGTTCACTAATCTTACTACCCACTTTCTGGCCCTGGGGAGAAATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
||
3UTR-3UTR CAA 90 bp | ACTTTAGGGATGCGGAGCTTCTCTTGGGTGTCTCCAGGTATAGGTTTCCTGTTGTGTAGTTTGTTGCACTaGGACTGGCCAGTGACTCAC | + |
Preference number: 3 (lower is better) Translates to: TLGMRSFSWVSPGIGFLLCSLLH*DWPVTH Trigger: GTGAGTCACTGGCCAGTCCAAGTGCAACAAACTACA...CAACAGGAAACCTATACCTGGAGACACCCAAGAGAAGCTCCGCATCCCTAAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
||
3UTR TCA 72 bp | GTGCCTCTAGGGACTGATTTGATAATGAGATTACCCTaGGTCTTTTCCCCTCCCTCTAGGCACCAAGAAGCC | + |
Preference number: 3 (lower is better) Translates to: VPLGTDLIMRLP*VFSPPSRHQEA Trigger: GGCTTCTTGGTGCCTAGAGGGAGGGGAAAAGACTCAGGGTAATCTCATTATCAAATCAGTCCCTAGAGGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019248.13 |
||
3UTR GCA 72 bp | CACTTATTGAATTATATATGTCCATTCCGTTCTGTCTaGTCAGCGTCCAGGACCCCCGAGGGAAGGCACCAT | + |
Preference number: 3 (lower is better) Translates to: HLLNYICPFRSV*SASRTPEGRHH Trigger: ATGGTGCCTTCCCTCGGGGGTCCTGGACGCTGAGCAGACAGAACGGAATGGACATATATAATTCAATAAGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
||
3UTR-3UTR CAA 90 bp | CGAGGGAAGGCACCATCTCCACAGAAGGTCCAACATCTTTGTAGAAGAAAAGCCCAGCAGCTGAAGGAGTaGTCTTCTTTAGGCTCAAGA | + |
Preference number: 3 (lower is better) Translates to: RGKAPSPQKVQHLCRRKAQQLKE*SSLGSR Trigger: TCTTGAGCCTAAAGAAGACAACTCCTTCAGCTGCTG...GGCTTTTCTTCTACAAAGATGTTGGACCTTCTGTGGAGATGGTGCCTTCCCTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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3UTR-3UTR CAA 90 bp | CTTAGCTTCCTGGTCTATCTTTCCATGACCCAGACGGTTCTCTGCCAAGCAAGACAGCAGCTGAAGGAGTaGTCTTCTTTAGGCTCAAGA | + |
Preference number: 3 (lower is better) Translates to: LSFLVYLSMTQTVLCQARQQLKE*SSLGSR Trigger: TCTTGAGCCTAAAGAAGACAACTCCTTCAGCTGCTG...TCTTGCTTGGCAGAGAACCGTCTGGGTCATGGAAAGATAGACCAGGAAGCTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
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3UTR TCA 72 bp | ACAGGTCAGAGTGACACTTTGGGATTCCCGGATTTCTaGTGGCATCTGGATGTAAGGTTGGAACGGTTTCTC | + |
Preference number: 3 (lower is better) Translates to: TGQSDTLGFPDF*WHLDVRLERFL Trigger: GAGAAACCGTTCCAACCTTACATCCAGATGCCATCAGAAATCCGGGAATCCCAAAGTGTCACTCTGACCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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3UTR CCA 72 bp | AACCCCAGATTCCCACTGTCATTGGCACGTATCGGGTaGATTTTCAGGGTACAATTGTCTATTCTGTTCCCC | + |
Preference number: 3 (lower is better) Translates to: NPRFPLSLARIG*IFRVQLSILFP Trigger: GGGGAACAGAATAGACAATTGTACCCTGAAAATCCACCCGATACGTGCCAATGACAGTGGGAATCTGGGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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3UTR CCA 72 bp | TTGGCACTTCACACTCTTTCCGTGGTCCGTCCACTTTaGTTGGAAGGTGAGCTTGCTCTCTGTATAGACATT | + |
Preference number: 3 (lower is better) Translates to: LALHTLSVVRPL*LEGELALCIDI Trigger: AATGTCTATACAGAGAGCAAGCTCACCTTCCAACCAAAGTGGACGGACCACGGAAAGAGTGTGAAGTGCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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3UTR CCA 72 bp | TGGAAGCCTGGCACCGGTATTTCCCTCTCATGTCCTTaGTCACTGAATGCAGAATTAGCTTGGACATCTGTT | + |
Preference number: 3 (lower is better) Translates to: WKPGTGISLSCP*SLNAELAWTSV Trigger: AACAGATGTCCAAGCTAATTCTGCATTCAGTGACCAAGGACATGAGAGGGAAATACCGGTGCCAGGCTTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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3UTR-3UTR CAA 90 bp | GCAGCTGAAGGAGTTGTCTTCTTTAGGCTCAAGAACCTGAAACAGCAGCTGCTACAGCAGCTGAAGGAGTaGTCTTCTTTAGGCTCAAGA | + |
Preference number: 3 (lower is better) Translates to: AAEGVVFFRLKNLKQQLLQQLKE*SSLGSR Trigger: TCTTGAGCCTAAAGAAGACAACTCCTTCAGCTGCTG...TAGCAGCTGCTGTTTCAGGTTCTTGAGCCTAAAGAAGACAACTCCTTCAGCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000187989.7 ENSMUST00000189718.7 ENSMUST00000190617.7 ENSMUST00000190646.7 |
||
3UTR-3UTR CAA 90 bp | ATTTCTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTAGTGAACGGGGTAGAGTACAATACAGGGTTTCCTaGAAAAACCCTGGCTGTCCT | + |
Preference number: 3 (lower is better) Translates to: ISPQGQKVGSKISERGRVQYRVS*KNPGCP Trigger: AGGACAGCCAGGGTTTTTCAAGGAAACCCTGTATTG...TACTCTACCCCGTTCACTAATCTTACTACCCACTTTCTGGCCCTGGGGAGAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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3UTR-3UTR CAA 90 bp | CGGGGTAGAGTATCAAGGGGTCAGAGAAGAAGTGTTAGTGACGATTACAACAGGCAATACAGGGTTTCCTaGAAAAACCCTGGCTGTCCT | + |
Preference number: 3 (lower is better) Translates to: RGRVSRGQRRSVSDDYNRQYRVS*KNPGCP Trigger: AGGACAGCCAGGGTTTTTCAAGGAAACCCTGTATTG...CCTGTTGTAATCGTCACTAACACTTCTTCTCTGACCCCTTGATACTCTACCCCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
||
3UTR-3UTR CAA 90 bp | TCCAGTGTTGTGCGTGTCACTCTCTGGAAAGCGCAAGATGGCATAACTAACGGTTTCCCTCTCATGTCCTaGGTCACTGAATGCAGAATT | + |
Preference number: 3 (lower is better) Translates to: SSVVRVTLWKAQDGITNGFPLMS*VTECRI Trigger: AATTCTGCATTCAGTGACCAAGGACATGAGAGGGAA...ACCGTTAGTTATGCCATCTTGCGCTTTCCAGAGAGTGACACGCACAACACTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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3UTR GCA 72 bp | CACCGGTATTTCCCTCTCATGTCCTTGGTCACTGAATaGAGAATTAGCTTGGACATCTGTTGTTCCTGTTCC | + |
Preference number: 3 (lower is better) Translates to: HRYFPLMSLVTE*RISLDICCSCS Trigger: GGAACAGGAACAACAGATGTCCAAGCTAATTCTGCATTCAGTGACCAAGGACATGAGAGGGAAATACCGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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3UTR CCA 72 bp | CAGAAGGTCCAACATCTTTGTAGAAGAAAAGCCAACTaGGGACAGTGCCTCTTGCTTCCTTACTTCTGTCCT | + |
Preference number: 3 (lower is better) Translates to: QKVQHLCRRKAN*GQCLLLPYFCP Trigger: AGGACAGAAGTAAGGAAGCAAGAGGCACTGTCCCCAGTTGGCTTTTCTTCTACAAAGATGTTGGACCTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
||
3UTR CCA 72 bp | TGTTGTGATACCAGGTGTAGTTTGTTGCACTTGGACTaGCCAGTGACTCACAAATCAGCTCTACTGACTGTC | + |
Preference number: 3 (lower is better) Translates to: CCDTRCSLLHLD*PVTHKSALLTV Trigger: GACAGTCAGTAGAGCTGATTTGTGAGTCACTGGCCAGTCCAAGTGCAACAAACTACACCTGGTATCACAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
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3UTR-3UTR CAA 90 bp | TCCAGTGTTGTGCGTGTCACTCTCTGGAAAGCGCAAGATGGCATAACTAACGGTATTTTCAGGGTACAATaGTCTATTCTGTTCCCCAGA | + |
Preference number: 3 (lower is better) Translates to: SSVVRVTLWKAQDGITNGIFRVQ*SILFPR Trigger: TCTGGGGAACAGAATAGACAATTGTACCCTGAAAAT...ACCGTTAGTTATGCCATCTTGCGCTTTCCAGAGAGTGACACGCACAACACTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
||
3UTR GCA 72 bp | TTGTCTATTCTGTTCCCCAGAAATGTTACTCTCCCTTaGTTAGAAAGGTACAGCTCAGACTCTGGGTCCTTC | + |
Preference number: 3 (lower is better) Translates to: LSILFPRNVTLP*LERYSSDSGSF Trigger: GAAGGACCCAGAGTCTGAGCTGTACCTTTCTAAGCAAGGGAGAGTAACATTTCTGGGGAACAGAATAGACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
||
3UTR CCA 72 bp | CTCTCATGTCCTTGGTCACTGAATGCAGAATTAGCTTaGACATCTGTTGTTCCTGTTCCAGTTCCTGATCCT | + |
Preference number: 3 (lower is better) Translates to: LSCPWSLNAELA*TSVVPVPVPDP Trigger: AGGATCAGGAACTGGAACAGGAACAACAGATGTCCAAGCTAATTCTGCATTCAGTGACCAAGGACATGAGAG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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3UTR-3UTR CAA 90 bp | GTAGAGTATCAAGGGGTCAGAGAAGAAGTGTTAGTGACGATTACAACAGGAACACAATACAGGGTTTCCTaGAAAAACCCTGGCTGTCCT | + |
Preference number: 3 (lower is better) Translates to: VEYQGVREEVLVTITTGTQYRVS*KNPGCP Trigger: AGGACAGCCAGGGTTTTTCAAGGAAACCCTGTATTG...TGTTCCTGTTGTAATCGTCACTAACACTTCTTCTCTGACCCCTTGATACTCTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
||
3UTR TCA 72 bp | ATATTCAAACCATCACAGCTCGCATGCATGAAACCCTaGGTTCAATACCAACACTGTGAGACAATGGTGCCT | + |
Preference number: 3 (lower is better) Translates to: IFKPSQLACMKP*VQYQHCETMVP Trigger: AGGCACCATTGTCTCACAGTGTTGGTATTGAACTCAGGGTTTCATGCATGCGAGCTGTGATGGTTTGAATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019248.13 |
||
3UTR GCA 72 bp | GATCAATCACCAATACAAAGGAGTTCATGTGACAGCTaGGCCACTTTTAATATGAAGCACTTATTGAATTAT | + |
Preference number: 3 (lower is better) Translates to: DQSPIQRSSCDS*ATFNMKHLLNY Trigger: ATAATTCAATAAGTGCTTCATATTAAAAGTGGCGCAGCTGTCACATGAACTCCTTTGTATTGGTGATTGATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019248.13 |
||
CDS-3UTR TCA 90 bp | AGCAGGCTGGCCTCGAACTCAGAAATCCGCCCGCCTCTGCCTCCTGAGTGCTGGCATGGTCCCCAGGGCTaGTGGACACACGCAGCCTCC | + |
Preference number: 4 (lower is better) Translates to: SRLASNSEIRPPLPPECWHGPQG*WTHAAS Trigger: GGAGGCTGCGTGTGTCCATCAGCCCTGGGGACCATG...CCAGCACTCAGGAGGCAGAGGCGGGCGGATTTCTGAGTTCGAGGCCAGCCTGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 |
||
CDS-3UTR TCA 90 bp | AGCAGACGTGGCACAATGCGTGAGGGAGGATCACCAGCCAGAGAAGGCCGGTCACATGGTCCCCAGGGCTaGTGGACACACGCAGCCTCC | + |
Preference number: 4 (lower is better) Translates to: SRRGTMREGGSPAREGRSHGPQG*WTHAAS Trigger: GGAGGCTGCGTGTGTCCATCAGCCCTGGGGACCATG...TGACCGGCCTTCTCTGGCTGGTGATCCTCCCTCACGCATTGTGCCACGTCTGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
||
CDS-3UTR TCA 90 bp | GTCCGTGCCCAGGGAGCTGCCGGTGCCTTAGCATCTGAGCTGCAGCAGCTGAAGACGCACAGTGCGCTCTaGGAGCACTTTGGAGGAGTG | + |
Preference number: 4 (lower is better) Translates to: VRAQGAAGALASELQQLKTHSAL*EHFGGV Trigger: CACTCCTCCAAAGTGCTCTCAGAGCGCACTGTGCGT...CTTCAGCTGCTGCAGCTCAGATGCTAAGGCACCGGCAGCTCCCTGGGCACGGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 ENSMUST00000190646.7 |
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CDS-3UTR TCA 90 bp | GGCACAGGATGGAGCAGATGGTGGTGGGTGCCTGGGGTTGGAGAAGCAGACGTGTCCTGTTCCAGTTCCTaGTCCTCTAGGGGGCGCCCA | + |
Preference number: 4 (lower is better) Translates to: GTGWSRWWWVPGVGEADVSCSSS*SSRGRP Trigger: TGGGCGCCCCCTAGAGGATCAGGAACTGGAACAGGA...CACGTCTGCTTCTCCAACCCCAGGCACCCACCACCATCTGCTCCATCCTGTGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR TCA 90 bp | CGTGCCCAGGGAGCTGCCGGTGCCTTAGCATCTGAGCTGCAGCAGCTGAAGGAGAGTGGACATTCAGGATaGCAGGGAGGGCCCACGAAC | + |
Preference number: 4 (lower is better) Translates to: RAQGAAGALASELQQLKESGHSG*QGGPTN Trigger: GTTCGTGGGCCCTCCCTGTCATCCTGAATGTCCACT...CTCCTTCAGCTGCTGCAGCTCAGATGCTAAGGCACCGGCAGCTCCCTGGGCACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 |
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CDS-3UTR TCA 90 bp | GTCCGTGCCCAGGGAGCTGCCGGTGCCTTAGCATCTGAGCTGCAGCAGCTGAAGTCTCAGTTTCTGGCCTaGGGAGTGGAGGTCTTGGCC | + |
Preference number: 4 (lower is better) Translates to: VRAQGAAGALASELQQLKSQFLA*GVEVLA Trigger: GGCCAAGACCTCCACTCCTCAGGCCAGAAACTGAGA...CTTCAGCTGCTGCAGCTCAGATGCTAAGGCACCGGCAGCTCCCTGGGCACGGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 |
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CDS-3UTR GCA 90 bp | GTCCGTGCCCAGGGAGCTGCCGGTGCCTTAGCATCTGAGCTGCAGCAGCTGAAGCCATCGTTCAGTCCCTaGGGTCATCCTCAACCCCAG | + |
Preference number: 4 (lower is better) Translates to: VRAQGAAGALASELQQLKPSFSP*GHPQPQ Trigger: CTGGGGTTGAGGATGACCGCAGGGACTGAACGATGG...CTTCAGCTGCTGCAGCTCAGATGCTAAGGCACCGGCAGCTCCCTGGGCACGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 ENSMUST00000190646.7 |
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CDS-3UTR TCA 90 bp | CGTGCCCAGGGAGCTGCCGGTGCCTTAGCATCTGAGCTGCAGCAGCTGAAGGAGGTCCACAGGTCAGAGTaGCACTTTGGGATTCCCGGA | + |
Preference number: 4 (lower is better) Translates to: RAQGAAGALASELQQLKEVHRSE*HFGIPG Trigger: TCCGGGAATCCCAAAGTGTCACTCTGACCTGTGGAC...CTCCTTCAGCTGCTGCAGCTCAGATGCTAAGGCACCGGCAGCTCCCTGGGCACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 ENSMUST00000190646.7 |
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CDS-3UTR TCA 90 bp | AGCAGGCTGGCCTCGAACTCAGAAATCCGCCCGCCTCTGCCTCCTGAGTGCTGGGTCCACAGGTCAGAGTaGCACTTTGGGATTCCCGGA | + |
Preference number: 4 (lower is better) Translates to: SRLASNSEIRPPLPPECWVHRSE*HFGIPG Trigger: TCCGGGAATCCCAAAGTGTCACTCTGACCTGTGGAC...CCAGCACTCAGGAGGCAGAGGCGGGCGGATTTCTGAGTTCGAGGCCAGCCTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 ENSMUST00000190646.7 |
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CDS-3UTR TCA 90 bp | GGCACAGGATGGAGCAGATGGTGGTGGGTGCCTGGGGTTGGAGAAGCAGACGTGACGCACAGTGCGCTCTaGGAGCACTTTGGAGGAGTG | + |
Preference number: 4 (lower is better) Translates to: GTGWSRWWWVPGVGEADVTHSAL*EHFGGV Trigger: CACTCCTCCAAAGTGCTCTCAGAGCGCACTGTGCGT...CACGTCTGCTTCTCCAACCCCAGGCACCCACCACCATCTGCTCCATCCTGTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR TCA 90 bp | GGCACAGGATGGAGCAGATGGTGGTGGGTGCCTGGGGTTGGAGAAGCAGACGTGAGTGGACATTCAGGATaGCAGGGAGGGCCCACGAAC | + |
Preference number: 4 (lower is better) Translates to: GTGWSRWWWVPGVGEADVSGHSG*QGGPTN Trigger: GTTCGTGGGCCCTCCCTGTCATCCTGAATGTCCACT...CACGTCTGCTTCTCCAACCCCAGGCACCCACCACCATCTGCTCCATCCTGTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR TCA 90 bp | TCTGCTCAGCGTCCAGGACCCCCGAGGGAAGGCACCATCTCCACAGAAGGTCCATCTCAGTTTCTGGCCTaGGGAGTGGAGGTCTTGGCC | + |
Preference number: 4 (lower is better) Translates to: SAQRPGPPREGTISTEGPSQFLA*GVEVLA Trigger: GGCCAAGACCTCCACTCCTCAGGCCAGAAACTGAGA...TGGACCTTCTGTGGAGATGGTGCCTTCCCTCGGGGGTCCTGGACGCTGAGCAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR GCA 90 bp | CAGGATGGAGCAGATGGTGGTGGGTGCCTGGGGTTGGAGAAGCAGACGTGGCACCCATCGTTCAGTCCCTaGGGTCATCCTCAACCCCAG | + |
Preference number: 4 (lower is better) Translates to: QDGADGGGCLGLEKQTWHPSFSP*GHPQPQ Trigger: CTGGGGTTGAGGATGACCGCAGGGACTGAACGATGG...GTGCCACGTCTGCTTCTCCAACCCCAGGCACCCACCACCATCTGCTCCATCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR GCA 90 bp | CGTGCCCAGGGAGCTGCCGGTGCCTTAGCATCTGAGCTGCAGCAGCTGAAGGAGGCTCTGAGTAATGGATaGTCTCATCCTCCGGGCAGC | + |
Preference number: 4 (lower is better) Translates to: RAQGAAGALASELQQLKEALSNG*SHPPGS Trigger: GCTGCCCGGAGGATGAGAGCATCCATTACTCAGAGC...CTCCTTCAGCTGCTGCAGCTCAGATGCTAAGGCACCGGCAGCTCCCTGGGCACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 |
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CDS-3UTR CCA 90 bp | GTCCGTGCCCAGGGAGCTGCCGGTGCCTTAGCATCTGAGCTGCAGCAGCTGAAGGCTCTGAGAGCACTTTaGAGGAGTGCTGGACTTGGC | + |
Preference number: 4 (lower is better) Translates to: VRAQGAAGALASELQQLKALRAL*RSAGLG Trigger: GCCAAGTCCAGCACTCCTCCAAAGTGCTCTCAGAGC...CTTCAGCTGCTGCAGCTCAGATGCTAAGGCACCGGCAGCTCCCTGGGCACGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 ENSMUST00000190646.7 |
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CDS-3UTR CCA 90 bp | GTCCGTGCCCAGGGAGCTGCCGGTGCCTTAGCATCTGAGCTGCAGCAGCTGAAGCTGGGCCTATGTCGTTaGAAGCCTGGCACCGGTATT | + |
Preference number: 4 (lower is better) Translates to: VRAQGAAGALASELQQLKLGLCR*KPGTGI Trigger: AATACCGGTGCCAGGCTTCCAACGACATAGGCCCAG...CTTCAGCTGCTGCAGCTCAGATGCTAAGGCACCGGCAGCTCCCTGGGCACGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 ENSMUST00000190646.7 |
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CDS-3UTR CCA 90 bp | GTCCGTGCCCAGGGAGCTGCCGGTGCCTTAGCATCTGAGCTGCAGCAGCTGAAGCTGTGCCTATCCCATTaGTCCCTTTGCAGCGGTAGG | + |
Preference number: 4 (lower is better) Translates to: VRAQGAAGALASELQQLKLCLSH*SLCSGR Trigger: CCTACCGCTGCAAAGGGACCAATGGGATAGGCACAG...CTTCAGCTGCTGCAGCTCAGATGCTAAGGCACCGGCAGCTCCCTGGGCACGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 |
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CDS-3UTR TCA 90 bp | GTCCGTGCCCAGGGAGCTGCCGGTGCCTTAGCATCTGAGCTGCAGCAGCTGAAGTCCGAGACATTGAGGTaGATGGGCTCCATCCATCGT | + |
Preference number: 4 (lower is better) Translates to: VRAQGAAGALASELQQLKSETLR*MGSIHR Trigger: ACGATGGATGGAGCCCATTCACCTCAATGTCTCGGA...CTTCAGCTGCTGCAGCTCAGATGCTAAGGCACCGGCAGCTCCCTGGGCACGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 ENSMUST00000190646.7 |
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CDS-3UTR TCA 90 bp | CGTGCCCAGGGAGCTGCCGGTGCCTTAGCATCTGAGCTGCAGCAGCTGAAGGAGTCCGAGACATTGAGGTaGATGGGCTCCATCCATCGT | + |
Preference number: 4 (lower is better) Translates to: RAQGAAGALASELQQLKESETLR*MGSIHR Trigger: ACGATGGATGGAGCCCATTCACCTCAATGTCTCGGA...CTCCTTCAGCTGCTGCAGCTCAGATGCTAAGGCACCGGCAGCTCCCTGGGCACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 ENSMUST00000190646.7 |
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CDS-3UTR TCA 90 bp | TATGTCCATTCCGTTCTGTCTGCTCAGCGTCCAGGACCCCCGAGGGAAGGCACCTGCAGGCAGCACAGCTaGCAGGCATGGAATCCCATG | + |
Preference number: 4 (lower is better) Translates to: YVHSVLSAQRPGPPREGTCRQHS*QAWNPM Trigger: CATGGGATTCCATGCCTGTCAGCTGTGCTGCCTGCA...GGTGCCTTCCCTCGGGGGTCCTGGACGCTGAGCAGACAGAACGGAATGGACATA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR GCA 90 bp | GGATGGAGCAGATGGTGGTGGGTGCCTGGGGTTGGAGAAGCAGACGTGGCACAACCATCGTTCAGTCCCTaGGGTCATCCTCAACCCCAG | + |
Preference number: 4 (lower is better) Translates to: GWSRWWWVPGVGEADVAQPSFSP*GHPQPQ Trigger: CTGGGGTTGAGGATGACCGCAGGGACTGAACGATGG...TTGTGCCACGTCTGCTTCTCCAACCCCAGGCACCCACCACCATCTGCTCCATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR GCA 90 bp | CGTGCCCAGGGAGCTGCCGGTGCCTTAGCATCTGAGCTGCAGCAGCTGAAGGAGAGGTACCTCCCTTCCTaGACGAGACTCCCATTCTTC | + |
Preference number: 4 (lower is better) Translates to: RAQGAAGALASELQQLKERYLPS*TRLPFF Trigger: GAAGAATGGGAGTCTCGTGCAGGAAGGGAGGTACCT...CTCCTTCAGCTGCTGCAGCTCAGATGCTAAGGCACCGGCAGCTCCCTGGGCACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 |
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CDS-3UTR GCA 90 bp | AGCGTCCAGGACCCCCGAGGGAAGGCACCATCTCCACAGAAGGTCCAACATCTTCCAAGGCGACCCGCTTaGCGATGGTCTCTGGACTGT | + |
Preference number: 4 (lower is better) Translates to: SVQDPRGKAPSPQKVQHLPRRPA*RWSLDC Trigger: ACAGTCCAGAGACCATCGGCAAGCGGGTCGCCTTGG...AAGATGTTGGACCTTCTGTGGAGATGGTGCCTTCCCTCGGGGGTCCTGGACGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR CCA 90 bp | CGTGCCCAGGGAGCTGCCGGTGCCTTAGCATCTGAGCTGCAGCAGCTGAAGGAGCAGGCAAAGAGGGTTTaGGGATGGTCAACGGTCCAA | + |
Preference number: 4 (lower is better) Translates to: RAQGAAGALASELQQLKEQAKRV*GWSTVQ Trigger: TTGGACCGTTGACCATCCCCAAACCCTCTTTGCCTG...CTCCTTCAGCTGCTGCAGCTCAGATGCTAAGGCACCGGCAGCTCCCTGGGCACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 ENSMUST00000190646.7 |
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CDS-3UTR CCA 90 bp | GGCACAGGATGGAGCAGATGGTGGTGGGTGCCTGGGGTTGGAGAAGCAGACGTGCTGGGCCTATGTCGTTaGAAGCCTGGCACCGGTATT | + |
Preference number: 4 (lower is better) Translates to: GTGWSRWWWVPGVGEADVLGLCR*KPGTGI Trigger: AATACCGGTGCCAGGCTTCCAACGACATAGGCCCAG...CACGTCTGCTTCTCCAACCCCAGGCACCCACCACCATCTGCTCCATCCTGTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CCA 90 bp | CGTGCCCAGGGAGCTGCCGGTGCCTTAGCATCTGAGCTGCAGCAGCTGAAGGAGTCTCACAGGACAAGGTaGCCTTCTTCCCCTCCATCA | + |
Preference number: 4 (lower is better) Translates to: RAQGAAGALASELQQLKESHRTR*PSSPPS Trigger: TGATGGAGGGGAAGAAGGCCACCTTGTCCTGTGAGA...CTCCTTCAGCTGCTGCAGCTCAGATGCTAAGGCACCGGCAGCTCCCTGGGCACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 |
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CDS-3UTR CCA 90 bp | CAGGATGGAGCAGATGGTGGTGGGTGCCTGGGGTTGGAGAAGCAGACGTGGCACGAGGAGTGGAGGTCTTaGCCACTGGAGTCAAACCAG | + |
Preference number: 4 (lower is better) Translates to: QDGADGGGCLGLEKQTWHEEWRS*PLESNQ Trigger: CTGGTTTGACTCCAGTGGCCAAGACCTCCACTCCTC...GTGCCACGTCTGCTTCTCCAACCCCAGGCACCCACCACCATCTGCTCCATCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR CCA 90 bp | CGTGCCCAGGGAGCTGCCGGTGCCTTAGCATCTGAGCTGCAGCAGCTGAAGGAGTCCAGTCTCAGTTTCTaGCCTGAGGAGTGGAGGTCT | + |
Preference number: 4 (lower is better) Translates to: RAQGAAGALASELQQLKESSLSF*PEEWRS Trigger: AGACCTCCACTCCTCAGGCCAGAAACTGAGACTGGA...CTCCTTCAGCTGCTGCAGCTCAGATGCTAAGGCACCGGCAGCTCCCTGGGCACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 |
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CDS-3UTR CCA 90 bp | AGCAGGCTGGCCTCGAACTCAGAAATCCGCCCGCCTCTGCCTCCTGAGTGCTGGTCCAGTCTCAGTTTCTaGCCTGAGGAGTGGAGGTCT | + |
Preference number: 4 (lower is better) Translates to: SRLASNSEIRPPLPPECWSSLSF*PEEWRS Trigger: AGACCTCCACTCCTCAGGCCAGAAACTGAGACTGGA...CCAGCACTCAGGAGGCAGAGGCGGGCGGATTTCTGAGTTCGAGGCCAGCCTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 |
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CDS-3UTR TCA 90 bp | CAGGATGGAGCAGATGGTGGTGGGTGCCTGGGGTTGGAGAAGCAGACGTGGCACGTTTCTCCGAGACATTaGGGTGAATGGGCTCCATCC | + |
Preference number: 4 (lower is better) Translates to: QDGADGGGCLGLEKQTWHVSPRH*GEWAPS Trigger: GGATGGAGCCCATTCACCTCAATGTCTCGGAGAAAC...GTGCCACGTCTGCTTCTCCAACCCCAGGCACCCACCACCATCTGCTCCATCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR TCA 90 bp | CAGGATGGAGCAGATGGTGGTGGGTGCCTGGGGTTGGAGAAGCAGACGTGGCACTCCCATGTCACTTTCTaGATCCTCAGCACTCCGGGT | + |
Preference number: 4 (lower is better) Translates to: QDGADGGGCLGLEKQTWHSHVTF*ILSTPG Trigger: ACCCGGAGTGCTGAGGATTCAGAAAGTGACATGGGA...GTGCCACGTCTGCTTCTCCAACCCCAGGCACCCACCACCATCTGCTCCATCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR TCA 90 bp | GACGTGGCACAATGCGTGAGGGAGGATCACCAGCCAGAGAAGGCCGGTCAGGTCTCCCATGTCACTTTCTaGATCCTCAGCACTCCGGGT | + |
Preference number: 4 (lower is better) Translates to: DVAQCVREDHQPEKAGQVSHVTF*ILSTPG Trigger: ACCCGGAGTGCTGAGGATTCAGAAAGTGACATGGGA...GACCTGACCGGCCTTCTCTGGCTGGTGATCCTCCCTCACGCATTGTGCCACGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR TCA 90 bp | CAGGGAGCTGCCGGTGCCTTAGCATCTGAGCTGCAGCAGCTGAAGGAGTTGTCTTGCAGGCAGCACAGCTaGCAGGCATGGAATCCCATG | + |
Preference number: 4 (lower is better) Translates to: QGAAGALASELQQLKELSCRQHS*QAWNPM Trigger: CATGGGATTCCATGCCTGTCAGCTGTGCTGCCTGCA...AGACAACTCCTTCAGCTGCTGCAGCTCAGATGCTAAGGCACCGGCAGCTCCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 |
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CDS-3UTR GCA 90 bp | ATGGAGCAGATGGTGGTGGGTGCCTGGGGTTGGAGAAGCAGACGTGGCACAATGCCATCGTTCAGTCCCTaGGGTCATCCTCAACCCCAG | + |
Preference number: 4 (lower is better) Translates to: MEQMVVGAWGWRSRRGTMPSFSP*GHPQPQ Trigger: CTGGGGTTGAGGATGACCGCAGGGACTGAACGATGG...CATTGTGCCACGTCTGCTTCTCCAACCCCAGGCACCCACCACCATCTGCTCCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR GCA 90 bp | AGCAGGCTGGCCTCGAACTCAGAAATCCGCCCGCCTCTGCCTCCTGAGTGCTGGACCCAGACGGTTCTCTaGCAAGCAAGAGTAATTCCC | + |
Preference number: 4 (lower is better) Translates to: SRLASNSEIRPPLPPECWTQTVL*QARVIP Trigger: GGGAATTACTCTTGCTTGGCAGAGAACCGTCTGGGT...CCAGCACTCAGGAGGCAGAGGCGGGCGGATTTCTGAGTTCGAGGCCAGCCTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 |
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CDS-3UTR GCA 90 bp | CAGGATGGAGCAGATGGTGGTGGGTGCCTGGGGTTGGAGAAGCAGACGTGGCACAGGTACCTCCCTTCCTaGACGAGACTCCCATTCTTC | + |
Preference number: 4 (lower is better) Translates to: QDGADGGGCLGLEKQTWHRYLPS*TRLPFF Trigger: GAAGAATGGGAGTCTCGTGCAGGAAGGGAGGTACCT...GTGCCACGTCTGCTTCTCCAACCCCAGGCACCCACCACCATCTGCTCCATCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR GCA 90 bp | AGCAGATGGTGGTGGGTGCCTGGGGTTGGAGAAGCAGACGTGGCACAATGCGTGGCTCTGAGTAATGGATaGTCTCATCCTCCGGGCAGC | + |
Preference number: 4 (lower is better) Translates to: SRWWWVPGVGEADVAQCVALSNG*SHPPGS Trigger: GCTGCCCGGAGGATGAGAGCATCCATTACTCAGAGC...CACGCATTGTGCCACGTCTGCTTCTCCAACCCCAGGCACCCACCACCATCTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR CCA 90 bp | GTCCGTGCCCAGGGAGCTGCCGGTGCCTTAGCATCTGAGCTGCAGCAGCTGAAGACTTTGGAGGAGTGCTaGACTTGGCACTTCACACTC | + |
Preference number: 4 (lower is better) Translates to: VRAQGAAGALASELQQLKTLEEC*TWHFTL Trigger: GAGTGTGAAGTGCCAAGTCCAGCACTCCTCCAAAGT...CTTCAGCTGCTGCAGCTCAGATGCTAAGGCACCGGCAGCTCCCTGGGCACGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 ENSMUST00000190646.7 |
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CDS-3UTR CCA 90 bp | AGCAGATGGTGGTGGGTGCCTGGGGTTGGAGAAGCAGACGTGGCACAATGCGTGGCTCTGAGAGCACTTTaGAGGAGTGCTGGACTTGGC | + |
Preference number: 4 (lower is better) Translates to: SRWWWVPGVGEADVAQCVALRAL*RSAGLG Trigger: GCCAAGTCCAGCACTCCTCCAAAGTGCTCTCAGAGC...CACGCATTGTGCCACGTCTGCTTCTCCAACCCCAGGCACCCACCACCATCTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CCA 90 bp | TATGTCCATTCCGTTCTGTCTGCTCAGCGTCCAGGACCCCCGAGGGAAGGCACCCTGGGCCTATGTCGTTaGAAGCCTGGCACCGGTATT | + |
Preference number: 4 (lower is better) Translates to: YVHSVLSAQRPGPPREGTLGLCR*KPGTGI Trigger: AATACCGGTGCCAGGCTTCCAACGACATAGGCCCAG...GGTGCCTTCCCTCGGGGGTCCTGGACGCTGAGCAGACAGAACGGAATGGACATA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR TCA 90 bp | CCTGGGGTTGGAGAAGCAGACGTGGCACAATGCGTGAGGGAGGATCACCAGCCAGTTTCTCCGAGACATTaGGGTGAATGGGCTCCATCC | + |
Preference number: 4 (lower is better) Translates to: PGVGEADVAQCVREDHQPVSPRH*GEWAPS Trigger: GGATGGAGCCCATTCACCTCAATGTCTCGGAGAAAC...TGGCTGGTGATCCTCCCTCACGCATTGTGCCACGTCTGCTTCTCCAACCCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR TCA 90 bp | GCCGGTGCCTTAGCATCTGAGCTGCAGCAGCTGAAGGAGTTGTCTTCTTTAGGCTCCTGTTCCAGTTCCTaGTCCTCTAGGGGGCGCCCA | + |
Preference number: 4 (lower is better) Translates to: AGALASELQQLKELSSLGSCSSS*SSRGRP Trigger: TGGGCGCCCCCTAGAGGATCAGGAACTGGAACAGGA...GCCTAAAGAAGACAACTCCTTCAGCTGCTGCAGCTCAGATGCTAAGGCACCGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 ENSMUST00000190646.7 |
||
CDS-3UTR TCA 90 bp | TCATCAAGGCAGGAGGATGGCAGCATCCAGGTTGGCATGGTGCAGGAGGAGCTGGACTGTAGTAGACAGTaGGGGTGCTGGGTGGTGACT | + |
Preference number: 4 (lower is better) Translates to: SSRQEDGSIQVGMVQEELDCSRQ*GCWVVT Trigger: AGTCACCACCCAGCACCCTCACTGTCTACTACAGTC...CAGCTCCTCCTGCACCATGCCAACCTGGATGCTGCCATCCTCCTGCCTTGATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019248.13 |
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CDS-3UTR GCA 90 bp | GGCACAGGATGGAGCAGATGGTGGTGGGTGCCTGGGGTTGGAGAAGCAGACGTGAGCACTTTGGAGGAGTaGTGGACTTGGCACTTCACA | + |
Preference number: 4 (lower is better) Translates to: GTGWSRWWWVPGVGEADVSTLEE*WTWHFT Trigger: TGTGAAGTGCCAAGTCCAGCACTCCTCCAAAGTGCT...CACGTCTGCTTCTCCAACCCCAGGCACCCACCACCATCTGCTCCATCCTGTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR GCA 90 bp | TCTGCTCAGCGTCCAGGACCCCCGAGGGAAGGCACCATCTCCACAGAAGGTCCAGAAGCCCCTGCTGGCTaGGGTTTTGCTTCCATTTTT | + |
Preference number: 4 (lower is better) Translates to: SAQRPGPPREGTISTEGPEAPAG*GFASIF Trigger: AAAAATGGAAGCAAAACCGCAGCCAGCAGGGGCTTC...TGGACCTTCTGTGGAGATGGTGCCTTCCCTCGGGGGTCCTGGACGCTGAGCAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR GCA 90 bp | GCCGGTGCCTTAGCATCTGAGCTGCAGCAGCTGAAGGAGTTGTCTTCTTTAGGCAGGAGGAGCCTGTGTTaGTGGGGTCCCTGCATCTCC | + |
Preference number: 4 (lower is better) Translates to: AGALASELQQLKELSSLGRRSLC*WGPCIS Trigger: GGAGATGCAGGGACCCCAGCAACACAGGCTCCTCCT...GCCTAAAGAAGACAACTCCTTCAGCTGCTGCAGCTCAGATGCTAAGGCACCGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 |
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CDS-3UTR GCA 90 bp | AGCGTCCAGGACCCCCGAGGGAAGGCACCATCTCCACAGAAGGTCCAACATCTTGCTCTGAGTAATGGATaGTCTCATCCTCCGGGCAGC | + |
Preference number: 4 (lower is better) Translates to: SVQDPRGKAPSPQKVQHLALSNG*SHPPGS Trigger: GCTGCCCGGAGGATGAGAGCATCCATTACTCAGAGC...AAGATGTTGGACCTTCTGTGGAGATGGTGCCTTCCCTCGGGGGTCCTGGACGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
||
CDS-3UTR CCA 90 bp | CGTGCCCAGGGAGCTGCCGGTGCCTTAGCATCTGAGCTGCAGCAGCTGAAGGAGTGTCCAGACGTGCCTTaGGTAGTGGAGTTTTGTACT | + |
Preference number: 4 (lower is better) Translates to: RAQGAAGALASELQQLKECPDVP*VVEFCT Trigger: AGTACAAAACTCCACTACCCAAGGCACGTCTGGACA...CTCCTTCAGCTGCTGCAGCTCAGATGCTAAGGCACCGGCAGCTCCCTGGGCACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 ENSMUST00000190646.7 |
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CDS-3UTR CCA 90 bp | GTCCGTGCCCAGGGAGCTGCCGGTGCCTTAGCATCTGAGCTGCAGCAGCTGAAGGTACAGCTCAGACTCTaGGTCCTTCTCAGTCTTTGT | + |
Preference number: 4 (lower is better) Translates to: VRAQGAAGALASELQQLKVQLRL*VLLSLC Trigger: ACAAAGACTGAGAAGGACCCAGAGTCTGAGCTGTAC...CTTCAGCTGCTGCAGCTCAGATGCTAAGGCACCGGCAGCTCCCTGGGCACGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 ENSMUST00000190646.7 |
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CDS-3UTR CCA 90 bp | AGCGTCCAGGACCCCCGAGGGAAGGCACCATCTCCACAGAAGGTCCAACATCTTGCTCTGAGAGCACTTTaGAGGAGTGCTGGACTTGGC | + |
Preference number: 4 (lower is better) Translates to: SVQDPRGKAPSPQKVQHLALRAL*RSAGLG Trigger: GCCAAGTCCAGCACTCCTCCAAAGTGCTCTCAGAGC...AAGATGTTGGACCTTCTGTGGAGATGGTGCCTTCCCTCGGGGGTCCTGGACGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CCA 90 bp | GTCCGTGCCCAGGGAGCTGCCGGTGCCTTAGCATCTGAGCTGCAGCAGCTGAAGGTCTCCTTCCAGGATTaGTGTGAAGCTCTGAATCAC | + |
Preference number: 4 (lower is better) Translates to: VRAQGAAGALASELQQLKVSFQD*CEALNH Trigger: GTGATTCAGAGCTTCACACCAATCCTGGAAGGAGAC...CTTCAGCTGCTGCAGCTCAGATGCTAAGGCACCGGCAGCTCCCTGGGCACGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 |
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CDS-3UTR CCA 90 bp | CAGGGAGCTGCCGGTGCCTTAGCATCTGAGCTGCAGCAGCTGAAGGAGTTGTCTCTGTGCCTATCCCATTaGTCCCTTTGCAGCGGTAGG | + |
Preference number: 4 (lower is better) Translates to: QGAAGALASELQQLKELSLCLSH*SLCSGR Trigger: CCTACCGCTGCAAAGGGACCAATGGGATAGGCACAG...AGACAACTCCTTCAGCTGCTGCAGCTCAGATGCTAAGGCACCGGCAGCTCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 |
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3UTR CAA 72 bp | CCATTCTTCTTCCAGAAGAAGCGGACCTCTGCCGGGTaGCTCTCTGCGAAGTCGCATTGGAGGAGGACACGC | + |
Preference number: 4 (lower is better) Translates to: PFFFQKKRTSAG*LSAKSHWRRTR Trigger: GCGTGTCCTCCTCCAATGCGACTTCGCAGAGAGCAACCCGGCAGAGGTCCGCTTCTTCTGGAAGAAGAATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
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CDS-3UTR TCA 90 bp | AGCGTCCAGGACCCCCGAGGGAAGGCACCATCTCCACAGAAGGTCCAACATCTTTCCCATGTCACTTTCTaGATCCTCAGCACTCCGGGT | + |
Preference number: 4 (lower is better) Translates to: SVQDPRGKAPSPQKVQHLSHVTF*ILSTPG Trigger: ACCCGGAGTGCTGAGGATTCAGAAAGTGACATGGGA...AAGATGTTGGACCTTCTGTGGAGATGGTGCCTTCCCTCGGGGGTCCTGGACGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR TCA 90 bp | GCCGGTGCCTTAGCATCTGAGCTGCAGCAGCTGAAGGAGTTGTCTTCTTTAGGCTGCAGGCAGCACAGCTaGCAGGCATGGAATCCCATG | + |
Preference number: 4 (lower is better) Translates to: AGALASELQQLKELSSLGCRQHS*QAWNPM Trigger: CATGGGATTCCATGCCTGTCAGCTGTGCTGCCTGCA...GCCTAAAGAAGACAACTCCTTCAGCTGCTGCAGCTCAGATGCTAAGGCACCGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 |
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CDS-3UTR TCA 90 bp | CCCGAGGGAAGGCACCATCTCCACAGAAGGTCCAACATCTTTGTAGAAGAAAAGCATGGTCCCCAGGGCTaGTGGACACACGCAGCCTCC | + |
Preference number: 4 (lower is better) Translates to: PEGRHHLHRRSNIFVEEKHGPQG*WTHAAS Trigger: GGAGGCTGCGTGTGTCCATCAGCCCTGGGGACCATG...CTTTTCTTCTACAAAGATGTTGGACCTTCTGTGGAGATGGTGCCTTCCCTCGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR CCA 90 bp | AGCAGGCTGGCCTCGAACTCAGAAATCCGCCCGCCTCTGCCTCCTGAGTGCTGGGTCAGAGTGACACTTTaGGATTCCCGGATTTCTGAT | + |
Preference number: 4 (lower is better) Translates to: SRLASNSEIRPPLPPECWVRVTL*DSRISD Trigger: ATCAGAAATCCGGGAATCCCAAAGTGTCACTCTGAC...CCAGCACTCAGGAGGCAGAGGCGGGCGGATTTCTGAGTTCGAGGCCAGCCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 ENSMUST00000190646.7 |
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CDS-3UTR CCA 90 bp | AGCAGATGGTGGTGGGTGCCTGGGGTTGGAGAAGCAGACGTGGCACAATGCGTGACTTTGGAGGAGTGCTaGACTTGGCACTTCACACTC | + |
Preference number: 4 (lower is better) Translates to: SRWWWVPGVGEADVAQCVTLEEC*TWHFTL Trigger: GAGTGTGAAGTGCCAAGTCCAGCACTCCTCCAAAGT...CACGCATTGTGCCACGTCTGCTTCTCCAACCCCAGGCACCCACCACCATCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CCA 90 bp | CCTGGGGTTGGAGAAGCAGACGTGGCACAATGCGTGAGGGAGGATCACCAGCCAACTTTGGAGGAGTGCTaGACTTGGCACTTCACACTC | + |
Preference number: 4 (lower is better) Translates to: PGVGEADVAQCVREDHQPTLEEC*TWHFTL Trigger: GAGTGTGAAGTGCCAAGTCCAGCACTCCTCCAAAGT...TGGCTGGTGATCCTCCCTCACGCATTGTGCCACGTCTGCTTCTCCAACCCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CCA 90 bp | AGCAGGCTGGCCTCGAACTCAGAAATCCGCCCGCCTCTGCCTCCTGAGTGCTGGTTGTTGCACTTGGACTaGCCAGTGACTCACAAATCA | + |
Preference number: 4 (lower is better) Translates to: SRLASNSEIRPPLPPECWLLHLD*PVTHKS Trigger: TGATTTGTGAGTCACTGGCCAGTCCAAGTGCAACAA...CCAGCACTCAGGAGGCAGAGGCGGGCGGATTTCTGAGTTCGAGGCCAGCCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 |
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CDS-3UTR CCA 90 bp | CCTGGGGTTGGAGAAGCAGACGTGGCACAATGCGTGAGGGAGGATCACCAGCCAATGCGGAGCTTCTCTTaGGTGTCTCCAGGTATAGGT | + |
Preference number: 4 (lower is better) Translates to: PGVGEADVAQCVREDHQPMRSFS*VSPGIG Trigger: ACCTATACCTGGAGACACCCAAGAGAAGCTCCGCAT...TGGCTGGTGATCCTCCCTCACGCATTGTGCCACGTCTGCTTCTCCAACCCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR CCA 90 bp | CAGGGAGCTGCCGGTGCCTTAGCATCTGAGCTGCAGCAGCTGAAGGAGTTGTCTAGCTCTGAATCACTGTaGTCACCGCCTTGGGAGCAT | + |
Preference number: 4 (lower is better) Translates to: QGAAGALASELQQLKELSSSESL*SPPWEH Trigger: ATGCTCCCAAGGCGGTGACCACAGTGATTCAGAGCT...AGACAACTCCTTCAGCTGCTGCAGCTCAGATGCTAAGGCACCGGCAGCTCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 |
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CDS-3UTR CCA 90 bp | GACGTGGCACAATGCGTGAGGGAGGATCACCAGCCAGAGAAGGCCGGTCAGGTCGTCTCCTTCCAGGATTaGTGTGAAGCTCTGAATCAC | + |
Preference number: 4 (lower is better) Translates to: DVAQCVREDHQPEKAGQVVSFQD*CEALNH Trigger: GTGATTCAGAGCTTCACACCAATCCTGGAAGGAGAC...GACCTGACCGGCCTTCTCTGGCTGGTGATCCTCCCTCACGCATTGTGCCACGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR CCA 90 bp | CAGGGAGCTGCCGGTGCCTTAGCATCTGAGCTGCAGCAGCTGAAGGAGTTGTCTTCTCACAGGACAAGGTaGCCTTCTTCCCCTCCATCA | + |
Preference number: 4 (lower is better) Translates to: QGAAGALASELQQLKELSSHRTR*PSSPPS Trigger: TGATGGAGGGGAAGAAGGCCACCTTGTCCTGTGAGA...AGACAACTCCTTCAGCTGCTGCAGCTCAGATGCTAAGGCACCGGCAGCTCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 |
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CDS-3UTR CCA 90 bp | AGCAGACGTGGCACAATGCGTGAGGGAGGATCACCAGCCAGAGAAGGCCGGTCACTTGCCGATGGTCTCTaGACTGTAGTAGACAGTGAG | + |
Preference number: 4 (lower is better) Translates to: SRRGTMREGGSPAREGRSLADGL*TVVDSE Trigger: CTCACTGTCTACTACAGTCCAGAGACCATCGGCAAG...TGACCGGCCTTCTCTGGCTGGTGATCCTCCCTCACGCATTGTGCCACGTCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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3UTR CAA 72 bp | TTCAGGATGACAGGGAGGGCCCACGAACACTTGTGGTaGCAGGCAGCACAGCTGACAGGCATGGAATCCCAT | + |
Preference number: 4 (lower is better) Translates to: FRMTGRAHEHLW*QAAQLTGMESH Trigger: ATGGGATTCCATGCCTGTCAGCTGTGCTGCCTGCAACCACAAGTGTTCGTGGGCCCTCCCTGTCATCCTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
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CDS-3UTR TCA 90 bp | CTTCTGTCCTTCCTGGGGATTTCTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTTCCTGTTCCAGTTCCTaGTCCTCTAGGGGGCGCCCA | + |
Preference number: 4 (lower is better) Translates to: LLSFLGISPQGQKVGSKISCSSS*SSRGRP Trigger: TGGGCGCCCCCTAGAGGATCAGGAACTGGAACAGGA...AATCTTACTACCCACTTTCTGGCCCTGGGGAGAAATCCCCAGGAAGGACAGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR TCA 90 bp | TTTCTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTAGTGAACGGGGTAGAGTATCATGGTCCCCAGGGCTaGTGGACACACGCAGCCTCC | + |
Preference number: 4 (lower is better) Translates to: FLPRARKWVVRLVNGVEYHGPQG*WTHAAS Trigger: GGAGGCTGCGTGTGTCCATCAGCCCTGGGGACCATG...ATACTCTACCCCGTTCACTAATCTTACTACCCACTTTCTGGCCCTGGGGAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR GCA 90 bp | CAGGGAGCTGCCGGTGCCTTAGCATCTGAGCTGCAGCAGCTGAAGGAGTTGTCTACCCAGACGGTTCTCTaGCAAGCAAGAGTAATTCCC | + |
Preference number: 4 (lower is better) Translates to: QGAAGALASELQQLKELSTQTVL*QARVIP Trigger: GGGAATTACTCTTGCTTGGCAGAGAACCGTCTGGGT...AGACAACTCCTTCAGCTGCTGCAGCTCAGATGCTAAGGCACCGGCAGCTCCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 |
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CDS-3UTR GCA 90 bp | CTTCTGTCCTTCCTGGGGATTTCTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTCCAAGGCGACCCGCTTaGCGATGGTCTCTGGACTGT | + |
Preference number: 4 (lower is better) Translates to: LLSFLGISPQGQKVGSKIPRRPA*RWSLDC Trigger: ACAGTCCAGAGACCATCGGCAAGCGGGTCGCCTTGG...AATCTTACTACCCACTTTCTGGCCCTGGGGAGAAATCCCCAGGAAGGACAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR GCA 90 bp | CAGGGAGCTGCCGGTGCCTTAGCATCTGAGCTGCAGCAGCTGAAGGAGTTGTCTGAAGCCCCTGCTGGCTaGGGTTTTGCTTCCATTTTT | + |
Preference number: 4 (lower is better) Translates to: QGAAGALASELQQLKELSEAPAG*GFASIF Trigger: AAAAATGGAAGCAAAACCGCAGCCAGCAGGGGCTTC...AGACAACTCCTTCAGCTGCTGCAGCTCAGATGCTAAGGCACCGGCAGCTCCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 |
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CDS-3UTR GCA 90 bp | ACCCCCGAGGGAAGGCACCATCTCCACAGAAGGTCCAACATCTTTGTAGAAGAAAGGAGGAGCCTGTGTTaGTGGGGTCCCTGCATCTCC | + |
Preference number: 4 (lower is better) Translates to: TPEGRHHLHRRSNIFVEERRSLC*WGPCIS Trigger: GGAGATGCAGGGACCCCAGCAACACAGGCTCCTCCT...TTCTTCTACAAAGATGTTGGACCTTCTGTGGAGATGGTGCCTTCCCTCGGGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR GCA 90 bp | GGATTTCTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTAGTGAACGGGGTAGAGAGGAGGAGCCTGTGTTaGTGGGGTCCCTGCATCTCC | + |
Preference number: 4 (lower is better) Translates to: GFLPRARKWVVRLVNGVERRSLC*WGPCIS Trigger: GGAGATGCAGGGACCCCAGCAACACAGGCTCCTCCT...CTCTACCCCGTTCACTAATCTTACTACCCACTTTCTGGCCCTGGGGAGAAATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR CCA 90 bp | GGATGGAGCAGATGGTGGTGGGTGCCTGGGGTTGGAGAAGCAGACGTGGCACAATGTCCAGACGTGCCTTaGGTAGTGGAGTTTTGTACT | + |
Preference number: 4 (lower is better) Translates to: GWSRWWWVPGVGEADVAQCPDVP*VVEFCT Trigger: AGTACAAAACTCCACTACCCAAGGCACGTCTGGACA...TTGTGCCACGTCTGCTTCTCCAACCCCAGGCACCCACCACCATCTGCTCCATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CCA 90 bp | AGCGTCCAGGACCCCCGAGGGAAGGCACCATCTCCACAGAAGGTCCAACATCTTCTTGCCGATGGTCTCTaGACTGTAGTAGACAGTGAG | + |
Preference number: 4 (lower is better) Translates to: SVQDPRGKAPSPQKVQHLLADGL*TVVDSE Trigger: CTCACTGTCTACTACAGTCCAGAGACCATCGGCAAG...AAGATGTTGGACCTTCTGTGGAGATGGTGCCTTCCCTCGGGGGTCCTGGACGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR TCA 90 bp | TCCTTACTTCTGTCCTTCCTGGGGATTTCTCCCCAGGGCCAGAAAGTGGGTAGTGTCCACAGGTCAGAGTaGCACTTTGGGATTCCCGGA | + |
Preference number: 4 (lower is better) Translates to: SLLLSFLGISPQGQKVGSVHRSE*HFGIPG Trigger: TCCGGGAATCCCAAAGTGTCACTCTGACCTGTGGAC...ACTACCCACTTTCTGGCCCTGGGGAGAAATCCCCAGGAAGGACAGAAGTAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR TCA 90 bp | CTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTAGTGAACGGGGTAGAGTATCAATCCTGTTCCAGTTCCTaGTCCTCTAGGGGGCGCCCA | + |
Preference number: 4 (lower is better) Translates to: LPRARKWVVRLVNGVEYQSCSSS*SSRGRP Trigger: TGGGCGCCCCCTAGAGGATCAGGAACTGGAACAGGA...TTGATACTCTACCCCGTTCACTAATCTTACTACCCACTTTCTGGCCCTGGGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR TCA 90 bp | TTCTTTAGGCTCAAGAACCTGAAACAGCAGCTGCTACCCACCTCAGTGCTTGAGTCCTGTTCCAGTTCCTaGTCCTCTAGGGGGCGCCCA | + |
Preference number: 4 (lower is better) Translates to: FFRLKNLKQQLLPTSVLESCSSS*SSRGRP Trigger: TGGGCGCCCCCTAGAGGATCAGGAACTGGAACAGGA...CTCAAGCACTGAGGTGGGTAGCAGCTGCTGTTTCAGGTTCTTGAGCCTAAAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000190646.7 |
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CDS-3UTR TCA 90 bp | GCCGGTGCCTTAGCATCTGAGCTGCAGCAGCTGAAGGAGTTGTCTTCTTTAGGCTCCCATGTCACTTTCTaGATCCTCAGCACTCCGGGT | + |
Preference number: 4 (lower is better) Translates to: AGALASELQQLKELSSLGSHVTF*ILSTPG Trigger: ACCCGGAGTGCTGAGGATTCAGAAAGTGACATGGGA...GCCTAAAGAAGACAACTCCTTCAGCTGCTGCAGCTCAGATGCTAAGGCACCGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 |
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CDS-3UTR TCA 90 bp | CTGTCCTTCCTGGGGATTTCTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTAGTAGTGGACATTCAGGATaGCAGGGAGGGCCCACGAAC | + |
Preference number: 4 (lower is better) Translates to: LSFLGISPQGQKVGSKISSGHSG*QGGPTN Trigger: GTTCGTGGGCCCTCCCTGTCATCCTGAATGTCCACT...ACTAATCTTACTACCCACTTTCTGGCCCTGGGGAGAAATCCCCAGGAAGGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
||
CDS-3UTR GCA 90 bp | GGATTTCTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTAGTGAACGGGGTAGAGCCATCGTTCAGTCCCTaGGGTCATCCTCAACCCCAG | + |
Preference number: 4 (lower is better) Translates to: GFLPRARKWVVRLVNGVEPSFSP*GHPQPQ Trigger: CTGGGGTTGAGGATGACCGCAGGGACTGAACGATGG...CTCTACCCCGTTCACTAATCTTACTACCCACTTTCTGGCCCTGGGGAGAAATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
||
CDS-3UTR GCA 90 bp | CCCGAGGGAAGGCACCATCTCCACAGAAGGTCCAACATCTTTGTAGAAGAAAAGAGGAGGAGCCTGTGTTaGTGGGGTCCCTGCATCTCC | + |
Preference number: 4 (lower is better) Translates to: PEGRHHLHRRSNIFVEEKRRSLC*WGPCIS Trigger: GGAGATGCAGGGACCCCAGCAACACAGGCTCCTCCT...CTTTTCTTCTACAAAGATGTTGGACCTTCTGTGGAGATGGTGCCTTCCCTCGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR GCA 90 bp | TTCTGTCCTTCCTGGGGATTTCTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTAAGGAGGAGCCTGTGTTaGTGGGGTCCCTGCATCTCC | + |
Preference number: 4 (lower is better) Translates to: FCPSWGFLPRARKWVVRLRRSLC*WGPCIS Trigger: GGAGATGCAGGGACCCCAGCAACACAGGCTCCTCCT...TAATCTTACTACCCACTTTCTGGCCCTGGGGAGAAATCCCCAGGAAGGACAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR CCA 90 bp | CAGGGAGCTGCCGGTGCCTTAGCATCTGAGCTGCAGCAGCTGAAGGAGTTGTCTTGTCCAGACGTGCCTTaGGTAGTGGAGTTTTGTACT | + |
Preference number: 4 (lower is better) Translates to: QGAAGALASELQQLKELSCPDVP*VVEFCT Trigger: AGTACAAAACTCCACTACCCAAGGCACGTCTGGACA...AGACAACTCCTTCAGCTGCTGCAGCTCAGATGCTAAGGCACCGGCAGCTCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 ENSMUST00000190646.7 |
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CDS-3UTR CCA 90 bp | GGATGGAGCAGATGGTGGTGGGTGCCTGGGGTTGGAGAAGCAGACGTGGCACAAGTCAGAGTGACACTTTaGGATTCCCGGATTTCTGAT | + |
Preference number: 4 (lower is better) Translates to: GWSRWWWVPGVGEADVAQVRVTL*DSRISD Trigger: ATCAGAAATCCGGGAATCCCAAAGTGTCACTCTGAC...TTGTGCCACGTCTGCTTCTCCAACCCCAGGCACCCACCACCATCTGCTCCATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CCA 90 bp | TTATATATGTCCATTCCGTTCTGTCTGCTCAGCGTCCAGGACCCCCGAGGGAAGCTGGGCCTATGTCGTTaGAAGCCTGGCACCGGTATT | + |
Preference number: 4 (lower is better) Translates to: LYMSIPFCLLSVQDPRGKLGLCR*KPGTGI Trigger: AATACCGGTGCCAGGCTTCCAACGACATAGGCCCAG...CTTCCCTCGGGGGTCCTGGACGCTGAGCAGACAGAACGGAATGGACATATATAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CCA 90 bp | ACAGCTGACAGGCATGGAATCCCATGTCACTTTCTGAATCCTCAGCACTCCGGGCTGGGCCTATGTCGTTaGAAGCCTGGCACCGGTATT | + |
Preference number: 4 (lower is better) Translates to: TADRHGIPCHFLNPQHSGLGLCR*KPGTGI Trigger: AATACCGGTGCCAGGCTTCCAACGACATAGGCCCAG...CCCGGAGTGCTGAGGATTCAGAAAGTGACATGGGATTCCATGCCTGTCAGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190646.7 |
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CDS-3UTR CCA 90 bp | AGCAGATGGTGGTGGGTGCCTGGGGTTGGAGAAGCAGACGTGGCACAATGCGTGTTGTTGCACTTGGACTaGCCAGTGACTCACAAATCA | + |
Preference number: 4 (lower is better) Translates to: SRWWWVPGVGEADVAQCVLLHLD*PVTHKS Trigger: TGATTTGTGAGTCACTGGCCAGTCCAAGTGCAACAA...CACGCATTGTGCCACGTCTGCTTCTCCAACCCCAGGCACCCACCACCATCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR CCA 90 bp | AGCGTCCAGGACCCCCGAGGGAAGGCACCATCTCCACAGAAGGTCCAACATCTTGTCTCCTTCCAGGATTaGTGTGAAGCTCTGAATCAC | + |
Preference number: 4 (lower is better) Translates to: SVQDPRGKAPSPQKVQHLVSFQD*CEALNH Trigger: GTGATTCAGAGCTTCACACCAATCCTGGAAGGAGAC...AAGATGTTGGACCTTCTGTGGAGATGGTGCCTTCCCTCGGGGGTCCTGGACGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR CCA 90 bp | TCCTTACTTCTGTCCTTCCTGGGGATTTCTCCCCAGGGCCAGAAAGTGGGTAGTCTGTGCCTATCCCATTaGTCCCTTTGCAGCGGTAGG | + |
Preference number: 4 (lower is better) Translates to: SLLLSFLGISPQGQKVGSLCLSH*SLCSGR Trigger: CCTACCGCTGCAAAGGGACCAATGGGATAGGCACAG...ACTACCCACTTTCTGGCCCTGGGGAGAAATCCCCAGGAAGGACAGAAGTAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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3UTR CAA 72 bp | TTGTCCAGACGTGCCTTGGGTAGTGGAGTTTTGTACTaGCAAGGAATCCTGATGCAGGCTCCCTCCCAGGCA | + |
Preference number: 4 (lower is better) Translates to: LSRRALGSGVLY*QGILMQAPSQA Trigger: TGCCTGGGAGGGAGCCTGCATCAGGATTCCTTGCAAGTACAAAACTCCACTACCCAAGGCACGTCTGGACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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3UTR CAA 72 bp | TTGAACCAAGACACCGCCACGGTCCTGAGTTTCGGGTaGCTGCTGTTAACCCGGCATGTCATGGTCACAGAA | + |
Preference number: 4 (lower is better) Translates to: LNQDTATVLSFG*LLLTRHVMVTE Trigger: TTCTGTGACCATGACATGCCGGGTTAACAGCAGCAACCCGAAACTCAGGACCGTGGCGGTGTCTTGGTTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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CDS-3UTR TCA 90 bp | TTGTACCTACAGACCAGGGTCACACTGTCTCCTTCCAGGATTGGTGTGAAGCTCGTCCACAGGTCAGAGTaGCACTTTGGGATTCCCGGA | + |
Preference number: 4 (lower is better) Translates to: LYLQTRVTLSPSRIGVKLVHRSE*HFGIPG Trigger: TCCGGGAATCCCAAAGTGTCACTCTGACCTGTGGAC...GAGCTTCACACCAATCCTGGAAGGAGACAGTGTGACCCTGGTCTGTAGGTACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190646.7 |
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CDS-3UTR TCA 90 bp | GCAGTTATAATTTCCAGAATCTTCTGGGGAGACGGAGCCGAAGCTCAGGTACCTACGCACAGTGCGCTCTaGGAGCACTTTGGAGGAGTG | + |
Preference number: 4 (lower is better) Translates to: AVIISRIFWGDGAEAQVPTHSAL*EHFGGV Trigger: CACTCCTCCAAAGTGCTCTCAGAGCGCACTGTGCGT...AGGTACCTGAGCTTCGGCTCCGTCTCCCCAGAAGATTCTGGAAATTATAACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190646.7 |
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CDS-3UTR TCA 90 bp | TTTCTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTAGTGAACGGGGTAGAGTATTCCTGTTCCAGTTCCTaGTCCTCTAGGGGGCGCCCA | + |
Preference number: 4 (lower is better) Translates to: FLPRARKWVVRLVNGVEYSCSSS*SSRGRP Trigger: TGGGCGCCCCCTAGAGGATCAGGAACTGGAACAGGA...ATACTCTACCCCGTTCACTAATCTTACTACCCACTTTCTGGCCCTGGGGAGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR TCA 90 bp | AGCATAATGGACATCCAGCTTAGCTTCCTGGTCTATCTTTCCATGACCCAGACGTCCTGTTCCAGTTCCTaGTCCTCTAGGGGGCGCCCA | + |
Preference number: 4 (lower is better) Translates to: SIMDIQLSFLVYLSMTQTSCSSS*SSRGRP Trigger: TGGGCGCCCCCTAGAGGATCAGGAACTGGAACAGGA...CGTCTGGGTCATGGAAAGATAGACCAGGAAGCTAAGCTGGATGTCCATTATGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000190455.2 ENSMUST00000190646.7 |
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CDS-3UTR TCA 90 bp | CGAGGGAAGGCACCATCTCCACAGAAGGTCCAACATCTTTGTAGAAGAAAAGCCAGTGGACATTCAGGATaGCAGGGAGGGCCCACGAAC | + |
Preference number: 4 (lower is better) Translates to: RGKAPSPQKVQHLCRRKASGHSG*QGGPTN Trigger: GTTCGTGGGCCCTCCCTGTCATCCTGAATGTCCACT...GGCTTTTCTTCTACAAAGATGTTGGACCTTCTGTGGAGATGGTGCCTTCCCTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR TCA 90 bp | GGATGGAGCAGATGGTGGTGGGTGCCTGGGGTTGGAGAAGCAGACGTGGCACAACTCCGATGGAGTTGTTaGCCATGCAGTTATAATTTC | + |
Preference number: 4 (lower is better) Translates to: GWSRWWWVPGVGEADVAQLRWSC*PCSYNF Trigger: GAAATTATAACTGCATGGTCAACAACTCCATCGGAG...TTGTGCCACGTCTGCTTCTCCAACCCCAGGCACCCACCACCATCTGCTCCATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR TCA 90 bp | GGTAGTAAGATTAGTGAACGGGGTAGAGTATCAAGGGGTCAGAGAAGAAGTGTTCATGGTCCCCAGGGCTaGTGGACACACGCAGCCTCC | + |
Preference number: 4 (lower is better) Translates to: GSKISERGRVSRGQRRSVHGPQG*WTHAAS Trigger: GGAGGCTGCGTGTGTCCATCAGCCCTGGGGACCATG...AACACTTCTTCTCTGACCCCTTGATACTCTACCCCGTTCACTAATCTTACTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR TCA 90 bp | CGAGGGAAGGCACCATCTCCACAGAAGGTCCAACATCTTTGTAGAAGAAAAGCCTCTCAGTTTCTGGCCTaGGGAGTGGAGGTCTTGGCC | + |
Preference number: 4 (lower is better) Translates to: RGKAPSPQKVQHLCRRKASQFLA*GVEVLA Trigger: GGCCAAGACCTCCACTCCTCAGGCCAGAAACTGAGA...GGCTTTTCTTCTACAAAGATGTTGGACCTTCTGTGGAGATGGTGCCTTCCCTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR TCA 90 bp | CTGTCCTTCCTGGGGATTTCTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTAGTGACTGTAGTAGACAGTaGGGGTGCTGGGTGGTGACT | + |
Preference number: 4 (lower is better) Translates to: LSFLGISPQGQKVGSKISDCSRQ*GCWVVT Trigger: AGTCACCACCCAGCACCCTCACTGTCTACTACAGTC...ACTAATCTTACTACCCACTTTCTGGCCCTGGGGAGAAATCCCCAGGAAGGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR GCA 90 bp | TCCAGGACCCCCGAGGGAAGGCACCATCTCCACAGAAGGTCCAACATCTTTGTAAGCACTTTGGAGGAGTaGTGGACTTGGCACTTCACA | + |
Preference number: 4 (lower is better) Translates to: SRTPEGRHHLHRRSNIFVSTLEE*WTWHFT Trigger: TGTGAAGTGCCAAGTCCAGCACTCCTCCAAAGTGCT...TACAAAGATGTTGGACCTTCTGTGGAGATGGTGCCTTCCCTCGGGGGTCCTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR GCA 90 bp | GCTGATGGACACACGCAGCCTCCGAGGAGCATACAGCACTTGGAGGTTCCAGGCTCCTTGGTCACTGAATaGAGAATTAGCTTGGACATC | + |
Preference number: 4 (lower is better) Translates to: ADGHTQPPRSIQHLEVPGSLVTE*RISLDI Trigger: GATGTCCAAGCTAATTCTGCATTCAGTGACCAAGGA...GCCTGGAACCTCCAAGTGCTGTATGCTCCTCGGAGGCTGCGTGTGTCCATCAGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190646.7 |
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CDS-3UTR GCA 90 bp | TCCTTACTTCTGTCCTTCCTGGGGATTTCTCCCCAGGGCCAGAAAGTGGGTAGTAGGTACCTCCCTTCCTaGACGAGACTCCCATTCTTC | + |
Preference number: 4 (lower is better) Translates to: SLLLSFLGISPQGQKVGSRYLPS*TRLPFF Trigger: GAAGAATGGGAGTCTCGTGCAGGAAGGGAGGTACCT...ACTACCCACTTTCTGGCCCTGGGGAGAAATCCCCAGGAAGGACAGAAGTAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR GCA 90 bp | GTAGAAGAAAAGCCAACTGGGGACAGTGCCTCTTGCTTCCTTACTTCTGTCCTTCCAAGGCGACCCGCTTaGCGATGGTCTCTGGACTGT | + |
Preference number: 4 (lower is better) Translates to: VEEKPTGDSASCFLTSVLPRRPA*RWSLDC Trigger: ACAGTCCAGAGACCATCGGCAAGCGGGTCGCCTTGG...AAGGACAGAAGTAAGGAAGCAAGAGGCACTGTCCCCAGTTGGCTTTTCTTCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR GCA 90 bp | TTTCCAATACAGGGTTTCCTTGAAAAACCCTGGCTGTCCTGGAACCCACTCTGTCCAAGGCGACCCGCTTaGCGATGGTCTCTGGACTGT | + |
Preference number: 4 (lower is better) Translates to: FPIQGFLEKPWLSWNPLCPRRPA*RWSLDC Trigger: ACAGTCCAGAGACCATCGGCAAGCGGGTCGCCTTGG...ACAGAGTGGGTTCCAGGACAGCCAGGGTTTTTCAAGGAAACCCTGTATTGGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 |
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CDS-3UTR CCA 90 bp | TTATATATGTCCATTCCGTTCTGTCTGCTCAGCGTCCAGGACCCCCGAGGGAAGCAGGCAAAGAGGGTTTaGGGATGGTCAACGGTCCAA | + |
Preference number: 4 (lower is better) Translates to: LYMSIPFCLLSVQDPRGKQAKRV*GWSTVQ Trigger: TTGGACCGTTGACCATCCCCAAACCCTCTTTGCCTG...CTTCCCTCGGGGGTCCTGGACGCTGAGCAGACAGAACGGAATGGACATATATAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CCA 90 bp | GGATTTCTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTAGTGAACGGGGTAGAGGCTCTGAGAGCACTTTaGAGGAGTGCTGGACTTGGC | + |
Preference number: 4 (lower is better) Translates to: GFLPRARKWVVRLVNGVEALRAL*RSAGLG Trigger: GCCAAGTCCAGCACTCCTCCAAAGTGCTCTCAGAGC...CTCTACCCCGTTCACTAATCTTACTACCCACTTTCTGGCCCTGGGGAGAAATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CCA 90 bp | CTTCTGTCCTTCCTGGGGATTTCTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTCTGGGCCTATGTCGTTaGAAGCCTGGCACCGGTATT | + |
Preference number: 4 (lower is better) Translates to: LLSFLGISPQGQKVGSKILGLCR*KPGTGI Trigger: AATACCGGTGCCAGGCTTCCAACGACATAGGCCCAG...AATCTTACTACCCACTTTCTGGCCCTGGGGAGAAATCCCCAGGAAGGACAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CCA 90 bp | CTGAATCACTGTGGTCACCGCCTTGGGAGCATAATGGACATCCAGCTTAGCTTCCTGGGCCTATGTCGTTaGAAGCCTGGCACCGGTATT | + |
Preference number: 4 (lower is better) Translates to: LNHCGHRLGSIMDIQLSFLGLCR*KPGTGI Trigger: AATACCGGTGCCAGGCTTCCAACGACATAGGCCCAG...GAAGCTAAGCTGGATGTCCATTATGCTCCCAAGGCGGTGACCACAGTGATTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190455.2 ENSMUST00000190646.7 |
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CDS-3UTR CCA 90 bp | CTTCTGTCCTTCCTGGGGATTTCTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTGAGGAGTGGAGGTCTTaGCCACTGGAGTCAAACCAG | + |
Preference number: 4 (lower is better) Translates to: LLSFLGISPQGQKVGSKIEEWRS*PLESNQ Trigger: CTGGTTTGACTCCAGTGGCCAAGACCTCCACTCCTC...AATCTTACTACCCACTTTCTGGCCCTGGGGAGAAATCCCCAGGAAGGACAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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3UTR CAA 72 bp | AGGATGTTGTCCAGACGTGCCTTGGGTAGTGGAGTTTaGTACTTGCAAGGAATCCTGATGCAGGCTCCCTCC | + |
Preference number: 4 (lower is better) Translates to: RMLSRRALGSGV*YLQGILMQAPS Trigger: GGAGGGAGCCTGCATCAGGATTCCTTGCAAGTACAAAACTCCACTACCCAAGGCACGTCTGGACAACATCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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CDS-3UTR TCA 90 bp | TCCTTCCTGGGGATTTCTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTAGTGAAGTCCACAGGTCAGAGTaGCACTTTGGGATTCCCGGA | + |
Preference number: 4 (lower is better) Translates to: SFLGISPQGQKVGSKISEVHRSE*HFGIPG Trigger: TCCGGGAATCCCAAAGTGTCACTCTGACCTGTGGAC...TTCACTAATCTTACTACCCACTTTCTGGCCCTGGGGAGAAATCCCCAGGAAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR TCA 90 bp | TTTCTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTAGTGAACGGGGTAGAGTATACGCACAGTGCGCTCTaGGAGCACTTTGGAGGAGTG | + |
Preference number: 4 (lower is better) Translates to: FLPRARKWVVRLVNGVEYTHSAL*EHFGGV Trigger: CACTCCTCCAAAGTGCTCTCAGAGCGCACTGTGCGT...ATACTCTACCCCGTTCACTAATCTTACTACCCACTTTCTGGCCCTGGGGAGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR TCA 90 bp | GTAGAAGAAAAGCCAACTGGGGACAGTGCCTCTTGCTTCCTTACTTCTGTCCTTTGCAGGCAGCACAGCTaGCAGGCATGGAATCCCATG | + |
Preference number: 4 (lower is better) Translates to: VEEKPTGDSASCFLTSVLCRQHS*QAWNPM Trigger: CATGGGATTCCATGCCTGTCAGCTGTGCTGCCTGCA...AAGGACAGAAGTAAGGAAGCAAGAGGCACTGTCCCCAGTTGGCTTTTCTTCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR TCA 90 bp | GCAGCTGAAGGAGTTGTCTTCTTTAGGCTCAAGAACCTGAAACAGCAGCTGCTATGCAGGCAGCACAGCTaGCAGGCATGGAATCCCATG | + |
Preference number: 4 (lower is better) Translates to: AAEGVVFFRLKNLKQQLLCRQHS*QAWNPM Trigger: CATGGGATTCCATGCCTGTCAGCTGTGCTGCCTGCA...TAGCAGCTGCTGTTTCAGGTTCTTGAGCCTAAAGAAGACAACTCCTTCAGCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 |
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CDS-3UTR TCA 90 bp | CAGGGAGCTGCCGGTGCCTTAGCATCTGAGCTGCAGCAGCTGAAGGAGTTGTCTCTCCGATGGAGTTGTTaGCCATGCAGTTATAATTTC | + |
Preference number: 4 (lower is better) Translates to: QGAAGALASELQQLKELSLRWSC*PCSYNF Trigger: GAAATTATAACTGCATGGTCAACAACTCCATCGGAG...AGACAACTCCTTCAGCTGCTGCAGCTCAGATGCTAAGGCACCGGCAGCTCCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 |
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CDS-3UTR TCA 90 bp | GCAGCTGAAGGAGTTGTCTTCTTTAGGCTCAAGAACCTGAAACAGCAGCTGCTATCTCAGTTTCTGGCCTaGGGAGTGGAGGTCTTGGCC | + |
Preference number: 4 (lower is better) Translates to: AAEGVVFFRLKNLKQQLLSQFLA*GVEVLA Trigger: GGCCAAGACCTCCACTCCTCAGGCCAGAAACTGAGA...TAGCAGCTGCTGTTTCAGGTTCTTGAGCCTAAAGAAGACAACTCCTTCAGCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 |
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CDS-3UTR TCA 90 bp | GAAGTGTTAGTGACGATTACAACAGGAACACATCCAGCTGCAGTGAGGCACAGGGACTGTAGTAGACAGTaGGGGTGCTGGGTGGTGACT | + |
Preference number: 4 (lower is better) Translates to: EVLVTITTGTHPAAVRHRDCSRQ*GCWVVT Trigger: AGTCACCACCCAGCACCCTCACTGTCTACTACAGTC...CCTGTGCCTCACTGCAGCTGGATGTGTTCCTGTTGTAATCGTCACTAACACTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR TCA 90 bp | CCCGAGGGAAGGCACCATCTCCACAGAAGGTCCAACATCTTTGTAGAAGAAAAGGACTGTAGTAGACAGTaGGGGTGCTGGGTGGTGACT | + |
Preference number: 4 (lower is better) Translates to: PEGRHHLHRRSNIFVEEKDCSRQ*GCWVVT Trigger: AGTCACCACCCAGCACCCTCACTGTCTACTACAGTC...CTTTTCTTCTACAAAGATGTTGGACCTTCTGTGGAGATGGTGCCTTCCCTCGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR GCA 90 bp | TTATATATGTCCATTCCGTTCTGTCTGCTCAGCGTCCAGGACCCCCGAGGGAAGACCCAGACGGTTCTCTaGCAAGCAAGAGTAATTCCC | + |
Preference number: 4 (lower is better) Translates to: LYMSIPFCLLSVQDPRGKTQTVL*QARVIP Trigger: GGGAATTACTCTTGCTTGGCAGAGAACCGTCTGGGT...CTTCCCTCGGGGGTCCTGGACGCTGAGCAGACAGAACGGAATGGACATATATAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
||
CDS-3UTR GCA 90 bp | ACCCCCGAGGGAAGGCACCATCTCCACAGAAGGTCCAACATCTTTGTAGAAGAAAGGTACCTCCCTTCCTaGACGAGACTCCCATTCTTC | + |
Preference number: 4 (lower is better) Translates to: TPEGRHHLHRRSNIFVEERYLPS*TRLPFF Trigger: GAAGAATGGGAGTCTCGTGCAGGAAGGGAGGTACCT...TTCTTCTACAAAGATGTTGGACCTTCTGTGGAGATGGTGCCTTCCCTCGGGGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
||
CDS-3UTR CCA 90 bp | ACCCCCGAGGGAAGGCACCATCTCCACAGAAGGTCCAACATCTTTGTAGAAGAACAGGCAAAGAGGGTTTaGGGATGGTCAACGGTCCAA | + |
Preference number: 4 (lower is better) Translates to: TPEGRHHLHRRSNIFVEEQAKRV*GWSTVQ Trigger: TTGGACCGTTGACCATCCCCAAACCCTCTTTGCCTG...TTCTTCTACAAAGATGTTGGACCTTCTGTGGAGATGGTGCCTTCCCTCGGGGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CCA 90 bp | TACAACAGGAACACATCCAGCTGCAGTGAGGCACAGGATGGAGCAGATGGTGGTACTTTGGAGGAGTGCTaGACTTGGCACTTCACACTC | + |
Preference number: 4 (lower is better) Translates to: YNRNTSSCSEAQDGADGGTLEEC*TWHFTL Trigger: GAGTGTGAAGTGCCAAGTCCAGCACTCCTCCAAAGT...ACCACCATCTGCTCCATCCTGTGCCTCACTGCAGCTGGATGTGTTCCTGTTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CCA 90 bp | TTATATATGTCCATTCCGTTCTGTCTGCTCAGCGTCCAGGACCCCCGAGGGAAGATGCGGAGCTTCTCTTaGGTGTCTCCAGGTATAGGT | + |
Preference number: 4 (lower is better) Translates to: LYMSIPFCLLSVQDPRGKMRSFS*VSPGIG Trigger: ACCTATACCTGGAGACACCCAAGAGAAGCTCCGCAT...CTTCCCTCGGGGGTCCTGGACGCTGAGCAGACAGAACGGAATGGACATATATAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR CCA 90 bp | CTGTCCTTCCTGGGGATTTCTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTAGTAGCTCTGAATCACTGTaGTCACCGCCTTGGGAGCAT | + |
Preference number: 4 (lower is better) Translates to: LSFLGISPQGQKVGSKISSSESL*SPPWEH Trigger: ATGCTCCCAAGGCGGTGACCACAGTGATTCAGAGCT...ACTAATCTTACTACCCACTTTCTGGCCCTGGGGAGAAATCCCCAGGAAGGACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR TCA 90 bp | TTCTGTCCTTCCTGGGGATTTCTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTAGTTTCTCCGAGACATTaGGGTGAATGGGCTCCATCC | + |
Preference number: 4 (lower is better) Translates to: FCPSWGFLPRARKWVVRLVSPRH*GEWAPS Trigger: GGATGGAGCCCATTCACCTCAATGTCTCGGAGAAAC...TAATCTTACTACCCACTTTCTGGCCCTGGGGAGAAATCCCCAGGAAGGACAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR TCA 90 bp | CTTTGTAGAAGAAAAGCCAACTGGGGACAGTGCCTCTTGCTTCCTTACTTCTGTACGCACAGTGCGCTCTaGGAGCACTTTGGAGGAGTG | + |
Preference number: 4 (lower is better) Translates to: LCRRKANWGQCLLLPYFCTHSAL*EHFGGV Trigger: CACTCCTCCAAAGTGCTCTCAGAGCGCACTGTGCGT...ACAGAAGTAAGGAAGCAAGAGGCACTGTCCCCAGTTGGCTTTTCTTCTACAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR TCA 90 bp | CTTATTGAATTATATATGTCCATTCCGTTCTGTCTGCTCAGCGTCCAGGACCCCTCTCAGTTTCTGGCCTaGGGAGTGGAGGTCTTGGCC | + |
Preference number: 4 (lower is better) Translates to: LIELYMSIPFCLLSVQDPSQFLA*GVEVLA Trigger: GGCCAAGACCTCCACTCCTCAGGCCAGAAACTGAGA...GGGGTCCTGGACGCTGAGCAGACAGAACGGAATGGACATATATAATTCAATAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR TCA 90 bp | GCAGCTGAAGGAGTTGTCTTCTTTAGGCTCAAGAACCTGAAACAGCAGCTGCTAGACTGTAGTAGACAGTaGGGGTGCTGGGTGGTGACT | + |
Preference number: 4 (lower is better) Translates to: AAEGVVFFRLKNLKQQLLDCSRQ*GCWVVT Trigger: AGTCACCACCCAGCACCCTCACTGTCTACTACAGTC...TAGCAGCTGCTGTTTCAGGTTCTTGAGCCTAAAGAAGACAACTCCTTCAGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 |
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CDS-3UTR GCA 90 bp | ATTTCTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTAGTGAACGGGGTAGAGTAGCTCTGAGTAATGGATaGTCTCATCCTCCGGGCAGC | + |
Preference number: 4 (lower is better) Translates to: ISPQGQKVGSKISERGRVALSNG*SHPPGS Trigger: GCTGCCCGGAGGATGAGAGCATCCATTACTCAGAGC...TACTCTACCCCGTTCACTAATCTTACTACCCACTTTCTGGCCCTGGGGAGAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR GCA 90 bp | AGTGTTAGTGACGATTACAACAGGAACACATCCAGCTGCAGTGAGGCACAGGATGCTCTGAGTAATGGATaGTCTCATCCTCCGGGCAGC | + |
Preference number: 4 (lower is better) Translates to: SVSDDYNRNTSSCSEAQDALSNG*SHPPGS Trigger: GCTGCCCGGAGGATGAGAGCATCCATTACTCAGAGC...ATCCTGTGCCTCACTGCAGCTGGATGTGTTCCTGTTGTAATCGTCACTAACACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR CCA 90 bp | GACCCCCGAGGGAAGGCACCATCTCCACAGAAGGTCCAACATCTTTGTAGAAGATGTCCAGACGTGCCTTaGGTAGTGGAGTTTTGTACT | + |
Preference number: 4 (lower is better) Translates to: DPRGKAPSPQKVQHLCRRCPDVP*VVEFCT Trigger: AGTACAAAACTCCACTACCCAAGGCACGTCTGGACA...TCTTCTACAAAGATGTTGGACCTTCTGTGGAGATGGTGCCTTCCCTCGGGGGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CCA 90 bp | GTAGAAGAAAAGCCAACTGGGGACAGTGCCTCTTGCTTCCTTACTTCTGTCCTTGCTCTGAGAGCACTTTaGAGGAGTGCTGGACTTGGC | + |
Preference number: 4 (lower is better) Translates to: VEEKPTGDSASCFLTSVLALRAL*RSAGLG Trigger: GCCAAGTCCAGCACTCCTCCAAAGTGCTCTCAGAGC...AAGGACAGAAGTAAGGAAGCAAGAGGCACTGTCCCCAGTTGGCTTTTCTTCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CCA 90 bp | GCAGCTGAAGGAGTTGTCTTCTTTAGGCTCAAGAACCTGAAACAGCAGCTGCTAGCTCTGAGAGCACTTTaGAGGAGTGCTGGACTTGGC | + |
Preference number: 4 (lower is better) Translates to: AAEGVVFFRLKNLKQQLLALRAL*RSAGLG Trigger: GCCAAGTCCAGCACTCCTCCAAAGTGCTCTCAGAGC...TAGCAGCTGCTGTTTCAGGTTCTTGAGCCTAAAGAAGACAACTCCTTCAGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 ENSMUST00000190646.7 |
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CDS-3UTR CCA 90 bp | ATTTCTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTAGTGAACGGGGTAGAGTAGAGGAGTGGAGGTCTTaGCCACTGGAGTCAAACCAG | + |
Preference number: 4 (lower is better) Translates to: ISPQGQKVGSKISERGRVEEWRS*PLESNQ Trigger: CTGGTTTGACTCCAGTGGCCAAGACCTCCACTCCTC...TACTCTACCCCGTTCACTAATCTTACTACCCACTTTCTGGCCCTGGGGAGAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR CCA 90 bp | GCAGCTGAAGGAGTTGTCTTCTTTAGGCTCAAGAACCTGAAACAGCAGCTGCTAGAGGAGTGGAGGTCTTaGCCACTGGAGTCAAACCAG | + |
Preference number: 4 (lower is better) Translates to: AAEGVVFFRLKNLKQQLLEEWRS*PLESNQ Trigger: CTGGTTTGACTCCAGTGGCCAAGACCTCCACTCCTC...TAGCAGCTGCTGTTTCAGGTTCTTGAGCCTAAAGAAGACAACTCCTTCAGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 |
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CDS-3UTR CCA 90 bp | TTTCCAATACAGGGTTTCCTTGAAAAACCCTGGCTGTCCTGGAACCCACTCTGTGAGGAGTGGAGGTCTTaGCCACTGGAGTCAAACCAG | + |
Preference number: 4 (lower is better) Translates to: FPIQGFLEKPWLSWNPLCEEWRS*PLESNQ Trigger: CTGGTTTGACTCCAGTGGCCAAGACCTCCACTCCTC...ACAGAGTGGGTTCCAGGACAGCCAGGGTTTTTCAAGGAAACCCTGTATTGGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 |
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CDS-3UTR CCA 90 bp | CCCGAGGGAAGGCACCATCTCCACAGAAGGTCCAACATCTTTGTAGAAGAAAAGTCCAGTCTCAGTTTCTaGCCTGAGGAGTGGAGGTCT | + |
Preference number: 4 (lower is better) Translates to: PEGRHHLHRRSNIFVEEKSSLSF*PEEWRS Trigger: AGACCTCCACTCCTCAGGCCAGAAACTGAGACTGGA...CTTTTCTTCTACAAAGATGTTGGACCTTCTGTGGAGATGGTGCCTTCCCTCGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR CCA 90 bp | TTTCCAATACAGGGTTTCCTTGAAAAACCCTGGCTGTCCTGGAACCCACTCTGTCTGTGCCTATCCCATTaGTCCCTTTGCAGCGGTAGG | + |
Preference number: 4 (lower is better) Translates to: FPIQGFLEKPWLSWNPLCLCLSH*SLCSGR Trigger: CCTACCGCTGCAAAGGGACCAATGGGATAGGCACAG...ACAGAGTGGGTTCCAGGACAGCCAGGGTTTTTCAAGGAAACCCTGTATTGGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 |
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CDS-3UTR CCA 90 bp | GGATTTCTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTAGTGAACGGGGTAGAGCTTGCCGATGGTCTCTaGACTGTAGTAGACAGTGAG | + |
Preference number: 4 (lower is better) Translates to: GFLPRARKWVVRLVNGVELADGL*TVVDSE Trigger: CTCACTGTCTACTACAGTCCAGAGACCATCGGCAAG...CTCTACCCCGTTCACTAATCTTACTACCCACTTTCTGGCCCTGGGGAGAAATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR CCA 90 bp | ACCCCCGAGGGAAGGCACCATCTCCACAGAAGGTCCAACATCTTTGTAGAAGAACTTGCCGATGGTCTCTaGACTGTAGTAGACAGTGAG | + |
Preference number: 4 (lower is better) Translates to: TPEGRHHLHRRSNIFVEELADGL*TVVDSE Trigger: CTCACTGTCTACTACAGTCCAGAGACCATCGGCAAG...TTCTTCTACAAAGATGTTGGACCTTCTGTGGAGATGGTGCCTTCCCTCGGGGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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3UTR CAA 72 bp | ATGCCACGGGGAGACTTTAGGGATGCGGAGCTTCTCTaGGGTGTCTCCAGGTATAGGTTTCCTGTTGTGATA | + |
Preference number: 4 (lower is better) Translates to: MPRGDFRDAELL*GVSRYRFPVVI Trigger: TATCACAACAGGAAACCTATACCTGGAGACACCCAAGAGAAGCTCCGCATCCCTAAAGTCTCCCCGTGGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
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3UTR CAA 72 bp | AGCTCAGACTCTGGGTCCTTCTCAGTCTTTGTGGCGTaGTACAGGACAGTTCCTGTGAATTTCTTGGTGGCC | + |
Preference number: 4 (lower is better) Translates to: SSDSGSFSVFVA*YRTVPVNFLVA Trigger: GGCCACCAAGAAATTCACAGGAACTGTCCTGTACAACGCCACAAAGACTGAGAAGGACCCAGAGTCTGAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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3UTR CAA 72 bp | TTAACATCCAGACGCACAGTGCGCTCTGAGAGCACTTaGGAGGAGTGCTGGACTTGGCACTTCACACTCTTT | + |
Preference number: 4 (lower is better) Translates to: LTSRRTVRSEST*EECWTWHFTLF Trigger: AAAGAGTGTGAAGTGCCAAGTCCAGCACTCCTCCAAAGTGCTCTCAGAGCGCACTGTGCGTCTGGATGTTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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CDS-3UTR TCA 90 bp | GTAGAAGAAAAGCCAACTGGGGACAGTGCCTCTTGCTTCCTTACTTCTGTCCTTTCCGAGACATTGAGGTaGATGGGCTCCATCCATCGT | + |
Preference number: 4 (lower is better) Translates to: VEEKPTGDSASCFLTSVLSETLR*MGSIHR Trigger: ACGATGGATGGAGCCCATTCACCTCAATGTCTCGGA...AAGGACAGAAGTAAGGAAGCAAGAGGCACTGTCCCCAGTTGGCTTTTCTTCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR TCA 90 bp | GCAGCTGAAGGAGTTGTCTTCTTTAGGCTCAAGAACCTGAAACAGCAGCTGCTATCCGAGACATTGAGGTaGATGGGCTCCATCCATCGT | + |
Preference number: 4 (lower is better) Translates to: AAEGVVFFRLKNLKQQLLSETLR*MGSIHR Trigger: ACGATGGATGGAGCCCATTCACCTCAATGTCTCGGA...TAGCAGCTGCTGTTTCAGGTTCTTGAGCCTAAAGAAGACAACTCCTTCAGCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 ENSMUST00000190646.7 |
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CDS-3UTR TCA 90 bp | TTTCTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTAGTGAACGGGGTAGAGTATGTTTCTCCGAGACATTaGGGTGAATGGGCTCCATCC | + |
Preference number: 4 (lower is better) Translates to: FLPRARKWVVRLVNGVEYVSPRH*GEWAPS Trigger: GGATGGAGCCCATTCACCTCAATGTCTCGGAGAAAC...ATACTCTACCCCGTTCACTAATCTTACTACCCACTTTCTGGCCCTGGGGAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR TCA 90 bp | ATTTCTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTAGTGAACGGGGTAGAGTAGTTTCTCCGAGACATTaGGGTGAATGGGCTCCATCC | + |
Preference number: 4 (lower is better) Translates to: ISPQGQKVGSKISERGRVVSPRH*GEWAPS Trigger: GGATGGAGCCCATTCACCTCAATGTCTCGGAGAAAC...TACTCTACCCCGTTCACTAATCTTACTACCCACTTTCTGGCCCTGGGGAGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR TCA 90 bp | GCAGCTGAAGGAGTTGTCTTCTTTAGGCTCAAGAACCTGAAACAGCAGCTGCTAGTTTCTCCGAGACATTaGGGTGAATGGGCTCCATCC | + |
Preference number: 4 (lower is better) Translates to: AAEGVVFFRLKNLKQQLLVSPRH*GEWAPS Trigger: GGATGGAGCCCATTCACCTCAATGTCTCGGAGAAAC...TAGCAGCTGCTGTTTCAGGTTCTTGAGCCTAAAGAAGACAACTCCTTCAGCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 ENSMUST00000190646.7 |
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CDS-3UTR TCA 90 bp | GGTAGTAAGATTAGTGAACGGGGTAGAGTATCAAGGGGTCAGAGAAGAAGTGTTACGCACAGTGCGCTCTaGGAGCACTTTGGAGGAGTG | + |
Preference number: 4 (lower is better) Translates to: GSKISERGRVSRGQRRSVTHSAL*EHFGGV Trigger: CACTCCTCCAAAGTGCTCTCAGAGCGCACTGTGCGT...AACACTTCTTCTCTGACCCCTTGATACTCTACCCCGTTCACTAATCTTACTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR TCA 90 bp | GCAGCTGAAGGAGTTGTCTTCTTTAGGCTCAAGAACCTGAAACAGCAGCTGCTATCCCATGTCACTTTCTaGATCCTCAGCACTCCGGGT | + |
Preference number: 4 (lower is better) Translates to: AAEGVVFFRLKNLKQQLLSHVTF*ILSTPG Trigger: ACCCGGAGTGCTGAGGATTCAGAAAGTGACATGGGA...TAGCAGCTGCTGTTTCAGGTTCTTGAGCCTAAAGAAGACAACTCCTTCAGCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 |
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CDS-3UTR GCA 90 bp | GAAGTGTTAGTGACGATTACAACAGGAACACATCCAGCTGCAGTGAGGCACAGGAGCACTTTGGAGGAGTaGTGGACTTGGCACTTCACA | + |
Preference number: 4 (lower is better) Translates to: EVLVTITTGTHPAAVRHRSTLEE*WTWHFT Trigger: TGTGAAGTGCCAAGTCCAGCACTCCTCCAAAGTGCT...CCTGTGCCTCACTGCAGCTGGATGTGTTCCTGTTGTAATCGTCACTAACACTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR GCA 90 bp | GCCGGTGCCTTAGCATCTGAGCTGCAGCAGCTGAAGGAGTTGTCTTCTTTAGGCTCCTTGGTCACTGAATaGAGAATTAGCTTGGACATC | + |
Preference number: 4 (lower is better) Translates to: AGALASELQQLKELSSLGSLVTE*RISLDI Trigger: GATGTCCAAGCTAATTCTGCATTCAGTGACCAAGGA...GCCTAAAGAAGACAACTCCTTCAGCTGCTGCAGCTCAGATGCTAAGGCACCGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 ENSMUST00000190646.7 |
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CDS-3UTR GCA 90 bp | CTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTAGTGAACGGGGTAGAGTATCAAACCCAGACGGTTCTCTaGCAAGCAAGAGTAATTCCC | + |
Preference number: 4 (lower is better) Translates to: LPRARKWVVRLVNGVEYQTQTVL*QARVIP Trigger: GGGAATTACTCTTGCTTGGCAGAGAACCGTCTGGGT...TTGATACTCTACCCCGTTCACTAATCTTACTACCCACTTTCTGGCCCTGGGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR GCA 90 bp | CTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTAGTGAACGGGGTAGAGTATCAAGAAGCCCCTGCTGGCTaGGGTTTTGCTTCCATTTTT | + |
Preference number: 4 (lower is better) Translates to: LPRARKWVVRLVNGVEYQEAPAG*GFASIF Trigger: AAAAATGGAAGCAAAACCGCAGCCAGCAGGGGCTTC...TTGATACTCTACCCCGTTCACTAATCTTACTACCCACTTTCTGGCCCTGGGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR GCA 90 bp | CGAGGGAAGGCACCATCTCCACAGAAGGTCCAACATCTTTGTAGAAGAAAAGCCGAAGCCCCTGCTGGCTaGGGTTTTGCTTCCATTTTT | + |
Preference number: 4 (lower is better) Translates to: RGKAPSPQKVQHLCRRKAEAPAG*GFASIF Trigger: AAAAATGGAAGCAAAACCGCAGCCAGCAGGGGCTTC...GGCTTTTCTTCTACAAAGATGTTGGACCTTCTGTGGAGATGGTGCCTTCCCTCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR CCA 90 bp | ATTTCTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTAGTGAACGGGGTAGAGTACAGGCAAAGAGGGTTTaGGGATGGTCAACGGTCCAA | + |
Preference number: 4 (lower is better) Translates to: ISPQGQKVGSKISERGRVQAKRV*GWSTVQ Trigger: TTGGACCGTTGACCATCCCCAAACCCTCTTTGCCTG...TACTCTACCCCGTTCACTAATCTTACTACCCACTTTCTGGCCCTGGGGAGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CCA 90 bp | GATTGGTGTGAAGCTCTGAATCACTGTGGTCACCGCCTTGGGAGCATAATGGACGTACAGCTCAGACTCTaGGTCCTTCTCAGTCTTTGT | + |
Preference number: 4 (lower is better) Translates to: DWCEALNHCGHRLGSIMDVQLRL*VLLSLC Trigger: ACAAAGACTGAGAAGGACCCAGAGTCTGAGCTGTAC...GTCCATTATGCTCCCAAGGCGGTGACCACAGTGATTCAGAGCTTCACACCAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190646.7 |
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CDS-3UTR CCA 90 bp | TTATATATGTCCATTCCGTTCTGTCTGCTCAGCGTCCAGGACCCCCGAGGGAAGGTCAGAGTGACACTTTaGGATTCCCGGATTTCTGAT | + |
Preference number: 4 (lower is better) Translates to: LYMSIPFCLLSVQDPRGKVRVTL*DSRISD Trigger: ATCAGAAATCCGGGAATCCCAAAGTGTCACTCTGAC...CTTCCCTCGGGGGTCCTGGACGCTGAGCAGACAGAACGGAATGGACATATATAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CCA 90 bp | TACAACAGGAACACATCCAGCTGCAGTGAGGCACAGGATGGAGCAGATGGTGGTGTCAGAGTGACACTTTaGGATTCCCGGATTTCTGAT | + |
Preference number: 4 (lower is better) Translates to: YNRNTSSCSEAQDGADGGVRVTL*DSRISD Trigger: ATCAGAAATCCGGGAATCCCAAAGTGTCACTCTGAC...ACCACCATCTGCTCCATCCTGTGCCTCACTGCAGCTGGATGTGTTCCTGTTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
||
CDS-3UTR CCA 90 bp | CTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTAGTGAACGGGGTAGAGTATCAAACTTTGGAGGAGTGCTaGACTTGGCACTTCACACTC | + |
Preference number: 4 (lower is better) Translates to: LPRARKWVVRLVNGVEYQTLEEC*TWHFTL Trigger: GAGTGTGAAGTGCCAAGTCCAGCACTCCTCCAAAGT...TTGATACTCTACCCCGTTCACTAATCTTACTACCCACTTTCTGGCCCTGGGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CCA 90 bp | TTTCCAATACAGGGTTTCCTTGAAAAACCCTGGCTGTCCTGGAACCCACTCTGTAGCTCTGAATCACTGTaGTCACCGCCTTGGGAGCAT | + |
Preference number: 4 (lower is better) Translates to: FPIQGFLEKPWLSWNPLCSSESL*SPPWEH Trigger: ATGCTCCCAAGGCGGTGACCACAGTGATTCAGAGCT...ACAGAGTGGGTTCCAGGACAGCCAGGGTTTTTCAAGGAAACCCTGTATTGGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 |
||
CDS-3UTR CCA 90 bp | ATTTCTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTAGTGAACGGGGTAGAGTATCTCACAGGACAAGGTaGCCTTCTTCCCCTCCATCA | + |
Preference number: 4 (lower is better) Translates to: ISPQGQKVGSKISERGRVSHRTR*PSSPPS Trigger: TGATGGAGGGGAAGAAGGCCACCTTGTCCTGTGAGA...TACTCTACCCCGTTCACTAATCTTACTACCCACTTTCTGGCCCTGGGGAGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
||
CDS-3UTR CCA 90 bp | TTTCTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTAGTGAACGGGGTAGAGTATTCTCACAGGACAAGGTaGCCTTCTTCCCCTCCATCA | + |
Preference number: 4 (lower is better) Translates to: FLPRARKWVVRLVNGVEYSHRTR*PSSPPS Trigger: TGATGGAGGGGAAGAAGGCCACCTTGTCCTGTGAGA...ATACTCTACCCCGTTCACTAATCTTACTACCCACTTTCTGGCCCTGGGGAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR CCA 90 bp | CTTTGTAGAAGAAAAGCCAACTGGGGACAGTGCCTCTTGCTTCCTTACTTCTGTCTGTGCCTATCCCATTaGTCCCTTTGCAGCGGTAGG | + |
Preference number: 4 (lower is better) Translates to: LCRRKANWGQCLLLPYFCLCLSH*SLCSGR Trigger: CCTACCGCTGCAAAGGGACCAATGGGATAGGCACAG...ACAGAAGTAAGGAAGCAAGAGGCACTGTCCCCAGTTGGCTTTTCTTCTACAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR GCA 90 bp | TTTCCAATACAGGGTTTCCTTGAAAAACCCTGGCTGTCCTGGAACCCACTCTGTAGCACTTTGGAGGAGTaGTGGACTTGGCACTTCACA | + |
Preference number: 4 (lower is better) Translates to: FPIQGFLEKPWLSWNPLCSTLEE*WTWHFT Trigger: TGTGAAGTGCCAAGTCCAGCACTCCTCCAAAGTGCT...ACAGAGTGGGTTCCAGGACAGCCAGGGTTTTTCAAGGAAACCCTGTATTGGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 ENSMUST00000190646.7 |
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CDS-3UTR GCA 90 bp | GCAGCTGAAGGAGTTGTCTTCTTTAGGCTCAAGAACCTGAAACAGCAGCTGCTAAGCACTTTGGAGGAGTaGTGGACTTGGCACTTCACA | + |
Preference number: 4 (lower is better) Translates to: AAEGVVFFRLKNLKQQLLSTLEE*WTWHFT Trigger: TGTGAAGTGCCAAGTCCAGCACTCCTCCAAAGTGCT...TAGCAGCTGCTGTTTCAGGTTCTTGAGCCTAAAGAAGACAACTCCTTCAGCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 ENSMUST00000190646.7 |
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CDS-3UTR GCA 90 bp | CGGGGTAGAGTATCAAGGGGTCAGAGAAGAAGTGTTAGTGACGATTACAACAGGACCCAGACGGTTCTCTaGCAAGCAAGAGTAATTCCC | + |
Preference number: 4 (lower is better) Translates to: RGRVSRGQRRSVSDDYNRTQTVL*QARVIP Trigger: GGGAATTACTCTTGCTTGGCAGAGAACCGTCTGGGT...CCTGTTGTAATCGTCACTAACACTTCTTCTCTGACCCCTTGATACTCTACCCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR CCA 90 bp | CTTTGTAGAAGAAAAGCCAACTGGGGACAGTGCCTCTTGCTTCCTTACTTCTGTCAGGCAAAGAGGGTTTaGGGATGGTCAACGGTCCAA | + |
Preference number: 4 (lower is better) Translates to: LCRRKANWGQCLLLPYFCQAKRV*GWSTVQ Trigger: TTGGACCGTTGACCATCCCCAAACCCTCTTTGCCTG...ACAGAAGTAAGGAAGCAAGAGGCACTGTCCCCAGTTGGCTTTTCTTCTACAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CCA 90 bp | ACCCCCGAGGGAAGGCACCATCTCCACAGAAGGTCCAACATCTTTGTAGAAGAAGTCAGAGTGACACTTTaGGATTCCCGGATTTCTGAT | + |
Preference number: 4 (lower is better) Translates to: TPEGRHHLHRRSNIFVEEVRVTL*DSRISD Trigger: ATCAGAAATCCGGGAATCCCAAAGTGTCACTCTGAC...TTCTTCTACAAAGATGTTGGACCTTCTGTGGAGATGGTGCCTTCCCTCGGGGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CCA 90 bp | TTTCTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTAGTGAACGGGGTAGAGTATATGCGGAGCTTCTCTTaGGTGTCTCCAGGTATAGGT | + |
Preference number: 4 (lower is better) Translates to: FLPRARKWVVRLVNGVEYMRSFS*VSPGIG Trigger: ACCTATACCTGGAGACACCCAAGAGAAGCTCCGCAT...ATACTCTACCCCGTTCACTAATCTTACTACCCACTTTCTGGCCCTGGGGAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR CCA 90 bp | GCAGCTGAAGGAGTTGTCTTCTTTAGGCTCAAGAACCTGAAACAGCAGCTGCTAATGCGGAGCTTCTCTTaGGTGTCTCCAGGTATAGGT | + |
Preference number: 4 (lower is better) Translates to: AAEGVVFFRLKNLKQQLLMRSFS*VSPGIG Trigger: ACCTATACCTGGAGACACCCAAGAGAAGCTCCGCAT...TAGCAGCTGCTGTTTCAGGTTCTTGAGCCTAAAGAAGACAACTCCTTCAGCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 |
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CDS-3UTR CCA 90 bp | CTTTGTAGAAGAAAAGCCAACTGGGGACAGTGCCTCTTGCTTCCTTACTTCTGTAGCTCTGAATCACTGTaGTCACCGCCTTGGGAGCAT | + |
Preference number: 4 (lower is better) Translates to: LCRRKANWGQCLLLPYFCSSESL*SPPWEH Trigger: ATGCTCCCAAGGCGGTGACCACAGTGATTCAGAGCT...ACAGAAGTAAGGAAGCAAGAGGCACTGTCCCCAGTTGGCTTTTCTTCTACAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR CCA 90 bp | CTTTGTAGAAGAAAAGCCAACTGGGGACAGTGCCTCTTGCTTCCTTACTTCTGTTCTCACAGGACAAGGTaGCCTTCTTCCCCTCCATCA | + |
Preference number: 4 (lower is better) Translates to: LCRRKANWGQCLLLPYFCSHRTR*PSSPPS Trigger: TGATGGAGGGGAAGAAGGCCACCTTGTCCTGTGAGA...ACAGAAGTAAGGAAGCAAGAGGCACTGTCCCCAGTTGGCTTTTCTTCTACAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR CCA 90 bp | TTTCCAATACAGGGTTTCCTTGAAAAACCCTGGCTGTCCTGGAACCCACTCTGTCTTGCCGATGGTCTCTaGACTGTAGTAGACAGTGAG | + |
Preference number: 4 (lower is better) Translates to: FPIQGFLEKPWLSWNPLCLADGL*TVVDSE Trigger: CTCACTGTCTACTACAGTCCAGAGACCATCGGCAAG...ACAGAGTGGGTTCCAGGACAGCCAGGGTTTTTCAAGGAAACCCTGTATTGGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 |
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3UTR CAA 72 bp | GCACTTCACACTCTTTCCGTGGTCCGTCCACTTTGGTaGGAAGGTGAGCTTGCTCTCTGTATAGACATTCTT | + |
Preference number: 4 (lower is better) Translates to: ALHTLSVVRPLW*EGELALCIDIL Trigger: AAGAATGTCTATACAGAGAGCAAGCTCACCTTCCAACCAAAGTGGACGGACCACGGAAAGAGTGTGAAGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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3UTR CAA 72 bp | TTGGAAGCCTGGCACCGGTATTTCCCTCTCATGTCCTaGGTCACTGAATGCAGAATTAGCTTGGACATCTGT | + |
Preference number: 4 (lower is better) Translates to: LEAWHRYFPLMS*VTECRISLDIC Trigger: ACAGATGTCCAAGCTAATTCTGCATTCAGTGACCAAGGACATGAGAGGGAAATACCGGTGCCAGGCTTCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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CDS-3UTR TCA 90 bp | GGTAGTAAGATTAGTGAACGGGGTAGAGTATCAAGGGGTCAGAGAAGAAGTGTTTCCGAGACATTGAGGTaGATGGGCTCCATCCATCGT | + |
Preference number: 4 (lower is better) Translates to: GSKISERGRVSRGQRRSVSETLR*MGSIHR Trigger: ACGATGGATGGAGCCCATTCACCTCAATGTCTCGGA...AACACTTCTTCTCTGACCCCTTGATACTCTACCCCGTTCACTAATCTTACTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR TCA 90 bp | GTAGAGTATCAAGGGGTCAGAGAAGAAGTGTTAGTGACGATTACAACAGGAACAGTCCACAGGTCAGAGTaGCACTTTGGGATTCCCGGA | + |
Preference number: 4 (lower is better) Translates to: VEYQGVREEVLVTITTGTVHRSE*HFGIPG Trigger: TCCGGGAATCCCAAAGTGTCACTCTGACCTGTGGAC...TGTTCCTGTTGTAATCGTCACTAACACTTCTTCTCTGACCCCTTGATACTCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CCA 90 bp | TTTCCAATACAGGGTTTCCTTGAAAAACCCTGGCTGTCCTGGAACCCACTCTGTGTACAGCTCAGACTCTaGGTCCTTCTCAGTCTTTGT | + |
Preference number: 4 (lower is better) Translates to: FPIQGFLEKPWLSWNPLCVQLRL*VLLSLC Trigger: ACAAAGACTGAGAAGGACCCAGAGTCTGAGCTGTAC...ACAGAGTGGGTTCCAGGACAGCCAGGGTTTTTCAAGGAAACCCTGTATTGGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 ENSMUST00000190646.7 |
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CDS-3UTR CCA 90 bp | ATTTCTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTAGTGAACGGGGTAGAGTAGTACAGCTCAGACTCTaGGTCCTTCTCAGTCTTTGT | + |
Preference number: 4 (lower is better) Translates to: ISPQGQKVGSKISERGRVVQLRL*VLLSLC Trigger: ACAAAGACTGAGAAGGACCCAGAGTCTGAGCTGTAC...TACTCTACCCCGTTCACTAATCTTACTACCCACTTTCTGGCCCTGGGGAGAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CCA 90 bp | TTTCTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTAGTGAACGGGGTAGAGTATGTACAGCTCAGACTCTaGGTCCTTCTCAGTCTTTGT | + |
Preference number: 4 (lower is better) Translates to: FLPRARKWVVRLVNGVEYVQLRL*VLLSLC Trigger: ACAAAGACTGAGAAGGACCCAGAGTCTGAGCTGTAC...ATACTCTACCCCGTTCACTAATCTTACTACCCACTTTCTGGCCCTGGGGAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CCA 90 bp | GCAGCTGAAGGAGTTGTCTTCTTTAGGCTCAAGAACCTGAAACAGCAGCTGCTAGTACAGCTCAGACTCTaGGTCCTTCTCAGTCTTTGT | + |
Preference number: 4 (lower is better) Translates to: AAEGVVFFRLKNLKQQLLVQLRL*VLLSLC Trigger: ACAAAGACTGAGAAGGACCCAGAGTCTGAGCTGTAC...TAGCAGCTGCTGTTTCAGGTTCTTGAGCCTAAAGAAGACAACTCCTTCAGCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 ENSMUST00000190646.7 |
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CDS-3UTR CCA 90 bp | TTCTGTCCTTCCTGGGGATTTCTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTATTGTTGCACTTGGACTaGCCAGTGACTCACAAATCA | + |
Preference number: 4 (lower is better) Translates to: FCPSWGFLPRARKWVVRLLLHLD*PVTHKS Trigger: TGATTTGTGAGTCACTGGCCAGTCCAAGTGCAACAA...TAATCTTACTACCCACTTTCTGGCCCTGGGGAGAAATCCCCAGGAAGGACAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR CCA 90 bp | CTTATTGAATTATATATGTCCATTCCGTTCTGTCTGCTCAGCGTCCAGGACCCCATGCGGAGCTTCTCTTaGGTGTCTCCAGGTATAGGT | + |
Preference number: 4 (lower is better) Translates to: LIELYMSIPFCLLSVQDPMRSFS*VSPGIG Trigger: ACCTATACCTGGAGACACCCAAGAGAAGCTCCGCAT...GGGGTCCTGGACGCTGAGCAGACAGAACGGAATGGACATATATAATTCAATAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR CCA 90 bp | TTTCTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTAGTGAACGGGGTAGAGTATGTCTCCTTCCAGGATTaGTGTGAAGCTCTGAATCAC | + |
Preference number: 4 (lower is better) Translates to: FLPRARKWVVRLVNGVEYVSFQD*CEALNH Trigger: GTGATTCAGAGCTTCACACCAATCCTGGAAGGAGAC...ATACTCTACCCCGTTCACTAATCTTACTACCCACTTTCTGGCCCTGGGGAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR CCA 90 bp | GCAGCTGAAGGAGTTGTCTTCTTTAGGCTCAAGAACCTGAAACAGCAGCTGCTAGTCTCCTTCCAGGATTaGTGTGAAGCTCTGAATCAC | + |
Preference number: 4 (lower is better) Translates to: AAEGVVFFRLKNLKQQLLVSFQD*CEALNH Trigger: GTGATTCAGAGCTTCACACCAATCCTGGAAGGAGAC...TAGCAGCTGCTGTTTCAGGTTCTTGAGCCTAAAGAAGACAACTCCTTCAGCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 |
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CDS-3UTR CCA 90 bp | GGTAGTAAGATTAGTGAACGGGGTAGAGTATCAAGGGGTCAGAGAAGAAGTGTTTCCAGTCTCAGTTTCTaGCCTGAGGAGTGGAGGTCT | + |
Preference number: 4 (lower is better) Translates to: GSKISERGRVSRGQRRSVSSLSF*PEEWRS Trigger: AGACCTCCACTCCTCAGGCCAGAAACTGAGACTGGA...AACACTTCTTCTCTGACCCCTTGATACTCTACCCCGTTCACTAATCTTACTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR GCA 90 bp | TCCTTCCTGGGGATTTCTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTAGTGAATCCTTGGTCACTGAATaGAGAATTAGCTTGGACATC | + |
Preference number: 4 (lower is better) Translates to: SFLGISPQGQKVGSKISESLVTE*RISLDI Trigger: GATGTCCAAGCTAATTCTGCATTCAGTGACCAAGGA...TTCACTAATCTTACTACCCACTTTCTGGCCCTGGGGAGAAATCCCCAGGAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR GCA 90 bp | CCCGAGGGAAGGCACCATCTCCACAGAAGGTCCAACATCTTTGTAGAAGAAAAGTCCTTGGTCACTGAATaGAGAATTAGCTTGGACATC | + |
Preference number: 4 (lower is better) Translates to: PEGRHHLHRRSNIFVEEKSLVTE*RISLDI Trigger: GATGTCCAAGCTAATTCTGCATTCAGTGACCAAGGA...CTTTTCTTCTACAAAGATGTTGGACCTTCTGTGGAGATGGTGCCTTCCCTCGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR GCA 90 bp | ATGGACATCCAGCTTAGCTTCCTGGTCTATCTTTCCATGACCCAGACGGTTCTCTCCTTGGTCACTGAATaGAGAATTAGCTTGGACATC | + |
Preference number: 4 (lower is better) Translates to: MDIQLSFLVYLSMTQTVLSLVTE*RISLDI Trigger: GATGTCCAAGCTAATTCTGCATTCAGTGACCAAGGA...GAGAACCGTCTGGGTCATGGAAAGATAGACCAGGAAGCTAAGCTGGATGTCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190455.2 ENSMUST00000190646.7 |
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CDS-3UTR GCA 90 bp | GTAGAGTATCAAGGGGTCAGAGAAGAAGTGTTAGTGACGATTACAACAGGAACAAGGTACCTCCCTTCCTaGACGAGACTCCCATTCTTC | + |
Preference number: 4 (lower is better) Translates to: VEYQGVREEVLVTITTGTRYLPS*TRLPFF Trigger: GAAGAATGGGAGTCTCGTGCAGGAAGGGAGGTACCT...TGTTCCTGTTGTAATCGTCACTAACACTTCTTCTCTGACCCCTTGATACTCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR CCA 90 bp | CTTATTGAATTATATATGTCCATTCCGTTCTGTCTGCTCAGCGTCCAGGACCCCTGTCCAGACGTGCCTTaGGTAGTGGAGTTTTGTACT | + |
Preference number: 4 (lower is better) Translates to: LIELYMSIPFCLLSVQDPCPDVP*VVEFCT Trigger: AGTACAAAACTCCACTACCCAAGGCACGTCTGGACA...GGGGTCCTGGACGCTGAGCAGACAGAACGGAATGGACATATATAATTCAATAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CCA 90 bp | GCAGCTGAAGGAGTTGTCTTCTTTAGGCTCAAGAACCTGAAACAGCAGCTGCTATTGTTGCACTTGGACTaGCCAGTGACTCACAAATCA | + |
Preference number: 4 (lower is better) Translates to: AAEGVVFFRLKNLKQQLLLLHLD*PVTHKS Trigger: TGATTTGTGAGTCACTGGCCAGTCCAAGTGCAACAA...TAGCAGCTGCTGTTTCAGGTTCTTGAGCCTAAAGAAGACAACTCCTTCAGCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 |
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CDS-3UTR CCA 90 bp | TTTCCAATACAGGGTTTCCTTGAAAAACCCTGGCTGTCCTGGAACCCACTCTGTTTGTTGCACTTGGACTaGCCAGTGACTCACAAATCA | + |
Preference number: 4 (lower is better) Translates to: FPIQGFLEKPWLSWNPLCLLHLD*PVTHKS Trigger: TGATTTGTGAGTCACTGGCCAGTCCAAGTGCAACAA...ACAGAGTGGGTTCCAGGACAGCCAGGGTTTTTCAAGGAAACCCTGTATTGGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 |
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CDS-3UTR CCA 90 bp | GTAGAGTATCAAGGGGTCAGAGAAGAAGTGTTAGTGACGATTACAACAGGAACAAGCTCTGAATCACTGTaGTCACCGCCTTGGGAGCAT | + |
Preference number: 4 (lower is better) Translates to: VEYQGVREEVLVTITTGTSSESL*SPPWEH Trigger: ATGCTCCCAAGGCGGTGACCACAGTGATTCAGAGCT...TGTTCCTGTTGTAATCGTCACTAACACTTCTTCTCTGACCCCTTGATACTCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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3UTR CAA 72 bp | GTTTCCTGTTGTGATACCAGGTGTAGTTTGTTGCACTaGGACTGGCCAGTGACTCACAAATCAGCTCTACTG | + |
Preference number: 4 (lower is better) Translates to: VSCCDTRCSLLH*DWPVTHKSALL Trigger: CAGTAGAGCTGATTTGTGAGTCACTGGCCAGTCCAAGTGCAACAAACTACACCTGGTATCACAACAGGAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187989.7 ENSMUST00000190646.7 |
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3UTR CAA 72 bp | TTGCTGCTGTTAACCCGGCATGTCATGGTCACAGAATaGTTCTTTTCCACCTCTGTGGGATTGACCTTGATC | + |
Preference number: 4 (lower is better) Translates to: LLLLTRHVMVTE*FFSTSVGLTLI Trigger: GATCAAGGTCAATCCCACAGAGGTGGAAAAGAACAATTCTGTGACCATGACATGCCGGGTTAACAGCAGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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CDS-3UTR TCA 90 bp | TTTCCAATACAGGGTTTCCTTGAAAAACCCTGGCTGTCCTGGAACCCACTCTGTCTCCGATGGAGTTGTTaGCCATGCAGTTATAATTTC | + |
Preference number: 4 (lower is better) Translates to: FPIQGFLEKPWLSWNPLCLRWSC*PCSYNF Trigger: GAAATTATAACTGCATGGTCAACAACTCCATCGGAG...ACAGAGTGGGTTCCAGGACAGCCAGGGTTTTTCAAGGAAACCCTGTATTGGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 |
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CDS-3UTR TCA 90 bp | GCAGCTGAAGGAGTTGTCTTCTTTAGGCTCAAGAACCTGAAACAGCAGCTGCTACTCCGATGGAGTTGTTaGCCATGCAGTTATAATTTC | + |
Preference number: 4 (lower is better) Translates to: AAEGVVFFRLKNLKQQLLLRWSC*PCSYNF Trigger: GAAATTATAACTGCATGGTCAACAACTCCATCGGAG...TAGCAGCTGCTGTTTCAGGTTCTTGAGCCTAAAGAAGACAACTCCTTCAGCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 |
||
CDS-3UTR CCA 90 bp | GGTAGTAAGATTAGTGAACGGGGTAGAGTATCAAGGGGTCAGAGAAGAAGTGTTTGTCCAGACGTGCCTTaGGTAGTGGAGTTTTGTACT | + |
Preference number: 4 (lower is better) Translates to: GSKISERGRVSRGQRRSVCPDVP*VVEFCT Trigger: AGTACAAAACTCCACTACCCAAGGCACGTCTGGACA...AACACTTCTTCTCTGACCCCTTGATACTCTACCCCGTTCACTAATCTTACTACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CCA 90 bp | GTAGAGTATCAAGGGGTCAGAGAAGAAGTGTTAGTGACGATTACAACAGGAACAACTTTGGAGGAGTGCTaGACTTGGCACTTCACACTC | + |
Preference number: 4 (lower is better) Translates to: VEYQGVREEVLVTITTGTTLEEC*TWHFTL Trigger: GAGTGTGAAGTGCCAAGTCCAGCACTCCTCCAAAGT...TGTTCCTGTTGTAATCGTCACTAACACTTCTTCTCTGACCCCTTGATACTCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CCA 90 bp | TACCAACACTGTGAGACAATGGTGCCTCTAGGGACTGATTTGATAATGAGATTATCCAGTCTCAGTTTCTaGCCTGAGGAGTGGAGGTCT | + |
Preference number: 4 (lower is better) Translates to: YQHCETMVPLGTDLIMRLSSLSF*PEEWRS Trigger: AGACCTCCACTCCTCAGGCCAGAAACTGAGACTGGA...TAATCTCATTATCAAATCAGTCCCTAGAGGCACCATTGTCTCACAGTGTTGGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019248.13 |
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CDS-3UTR TCA 90 bp | CTTATTGAATTATATATGTCCATTCCGTTCTGTCTGCTCAGCGTCCAGGACCCCCTCCGATGGAGTTGTTaGCCATGCAGTTATAATTTC | + |
Preference number: 4 (lower is better) Translates to: LIELYMSIPFCLLSVQDPLRWSC*PCSYNF Trigger: GAAATTATAACTGCATGGTCAACAACTCCATCGGAG...GGGGTCCTGGACGCTGAGCAGACAGAACGGAATGGACATATATAATTCAATAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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3UTR CAA 72 bp | ATTGTCTATTCTGTTCCCCAGAAATGTTACTCTCCCTaGCTTAGAAAGGTACAGCTCAGACTCTGGGTCCTT | + |
Preference number: 4 (lower is better) Translates to: IVYSVPQKCYSP*LRKVQLRLWVL Trigger: AAGGACCCAGAGTCTGAGCTGTACCTTTCTAAGCAAGGGAGAGTAACATTTCTGGGGAACAGAATAGACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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3UTR CAA 72 bp | TCATTGGCACGTATCGGGTGGATTTTCAGGGTACAATaGTCTATTCTGTTCCCCAGAAATGTTACTCTCCCT | + |
Preference number: 4 (lower is better) Translates to: SLARIGWIFRVQ*SILFPRNVTLP Trigger: AGGGAGAGTAACATTTCTGGGGAACAGAATAGACAATTGTACCCTGAAAATCCACCCGATACGTGCCAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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CDS-3UTR GCA 90 bp | GTAGAGTATCAAGGGGTCAGAGAAGAAGTGTTAGTGACGATTACAACAGGAACATCCTTGGTCACTGAATaGAGAATTAGCTTGGACATC | + |
Preference number: 4 (lower is better) Translates to: VEYQGVREEVLVTITTGTSLVTE*RISLDI Trigger: GATGTCCAAGCTAATTCTGCATTCAGTGACCAAGGA...TGTTCCTGTTGTAATCGTCACTAACACTTCTTCTCTGACCCCTTGATACTCTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | AGCAGGCTGGCCTCGAACTCAGAAATCCGCCCGCCTCTGCCTCCTGAGTGCTGGGAGGAGGAGCCTGTGTaGCTGGGGTCCCTGCATCTC | + |
Preference number: 5 (lower is better) Translates to: SRLASNSEIRPPLPPECWEEEPV*LGSLHL Trigger: GAGATGCAGGGACCCCAGCAACACAGGCTCCTCCTC...CCAGCACTCAGGAGGCAGAGGCGGGCGGATTTCTGAGTTCGAGGCCAGCCTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 |
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CDS-3UTR CAA 90 bp | AGCAGGCTGGCCTCGAACTCAGAAATCCGCCCGCCTCTGCCTCCTGAGTGCTGGCCTGGGCCTATGTCGTaGGAAGCCTGGCACCGGTAT | + |
Preference number: 5 (lower is better) Translates to: SRLASNSEIRPPLPPECWPGPMS*EAWHRY Trigger: ATACCGGTGCCAGGCTTCCAACGACATAGGCCCAGG...CCAGCACTCAGGAGGCAGAGGCGGGCGGATTTCTGAGTTCGAGGCCAGCCTGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | GACGTGGCACAATGCGTGAGGGAGGATCACCAGCCAGAGAAGGCCGGTCAGGTCGAGGAGGAGCCTGTGTaGCTGGGGTCCCTGCATCTC | + |
Preference number: 5 (lower is better) Translates to: DVAQCVREDHQPEKAGQVEEEPV*LGSLHL Trigger: GAGATGCAGGGACCCCAGCAACACAGGCTCCTCCTC...GACCTGACCGGCCTTCTCTGGCTGGTGATCCTCCCTCACGCATTGTGCCACGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR CAA 90 bp | GACGTGGCACAATGCGTGAGGGAGGATCACCAGCCAGAGAAGGCCGGTCAGGTCCCTGGGCCTATGTCGTaGGAAGCCTGGCACCGGTAT | + |
Preference number: 5 (lower is better) Translates to: DVAQCVREDHQPEKAGQVPGPMS*EAWHRY Trigger: ATACCGGTGCCAGGCTTCCAACGACATAGGCCCAGG...GACCTGACCGGCCTTCTCTGGCTGGTGATCCTCCCTCACGCATTGTGCCACGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | TCTGCTCAGCGTCCAGGACCCCCGAGGGAAGGCACCATCTCCACAGAAGGTCCACCTGGGCCTATGTCGTaGGAAGCCTGGCACCGGTAT | + |
Preference number: 5 (lower is better) Translates to: SAQRPGPPREGTISTEGPPGPMS*EAWHRY Trigger: ATACCGGTGCCAGGCTTCCAACGACATAGGCCCAGG...TGGACCTTCTGTGGAGATGGTGCCTTCCCTCGGGGGTCCTGGACGCTGAGCAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | CGTGCCCAGGGAGCTGCCGGTGCCTTAGCATCTGAGCTGCAGCAGCTGAAGGAGCTCAGCACTCCGGGTTaGAGCACACTCCCAGAACCT | + |
Preference number: 5 (lower is better) Translates to: RAQGAAGALASELQQLKELSTPG*STLPEP Trigger: AGGTTCTGGGAGTGTGCTCAAACCCGGAGTGCTGAG...CTCCTTCAGCTGCTGCAGCTCAGATGCTAAGGCACCGGCAGCTCCCTGGGCACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 |
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CDS-3UTR CAA 90 bp | CGTGCCCAGGGAGCTGCCGGTGCCTTAGCATCTGAGCTGCAGCAGCTGAAGGAGGTGACCGAGTCGCTGTaGTTTGGAGGAGGAGCCTGT | + |
Preference number: 5 (lower is better) Translates to: RAQGAAGALASELQQLKEVTESL*FGGGAC Trigger: ACAGGCTCCTCCTCCAAACAACAGCGACTCGGTCAC...CTCCTTCAGCTGCTGCAGCTCAGATGCTAAGGCACCGGCAGCTCCCTGGGCACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 |
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CDS-3UTR CAA 90 bp | CGTGCCCAGGGAGCTGCCGGTGCCTTAGCATCTGAGCTGCAGCAGCTGAAGGAGCACGAACACTTGTGGTaGCAGGCAGCACAGCTGACA | + |
Preference number: 5 (lower is better) Translates to: RAQGAAGALASELQQLKEHEHLW*QAAQLT Trigger: TGTCAGCTGTGCTGCCTGCAACCACAAGTGTTCGTG...CTCCTTCAGCTGCTGCAGCTCAGATGCTAAGGCACCGGCAGCTCCCTGGGCACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 |
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CDS-3UTR CAA 90 bp | AGCAGGCTGGCCTCGAACTCAGAAATCCGCCCGCCTCTGCCTCCTGAGTGCTGGCACGAACACTTGTGGTaGCAGGCAGCACAGCTGACA | + |
Preference number: 5 (lower is better) Translates to: SRLASNSEIRPPLPPECWHEHLW*QAAQLT Trigger: TGTCAGCTGTGCTGCCTGCAACCACAAGTGTTCGTG...CCAGCACTCAGGAGGCAGAGGCGGGCGGATTTCTGAGTTCGAGGCCAGCCTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 |
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CDS-3UTR CAA 90 bp | AGCGTCCAGGACCCCCGAGGGAAGGCACCATCTCCACAGAAGGTCCAACATCTTCCTGGGCCTATGTCGTaGGAAGCCTGGCACCGGTAT | + |
Preference number: 5 (lower is better) Translates to: SVQDPRGKAPSPQKVQHLPGPMS*EAWHRY Trigger: ATACCGGTGCCAGGCTTCCAACGACATAGGCCCAGG...AAGATGTTGGACCTTCTGTGGAGATGGTGCCTTCCCTCGGGGGTCCTGGACGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | AGCAGATGGTGGTGGGTGCCTGGGGTTGGAGAAGCAGACGTGGCACAATGCGTGCTCAGCACTCCGGGTTaGAGCACACTCCCAGAACCT | + |
Preference number: 5 (lower is better) Translates to: SRWWWVPGVGEADVAQCVLSTPG*STLPEP Trigger: AGGTTCTGGGAGTGTGCTCAAACCCGGAGTGCTGAG...CACGCATTGTGCCACGTCTGCTTCTCCAACCCCAGGCACCCACCACCATCTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR CAA 90 bp | TATGTCCATTCCGTTCTGTCTGCTCAGCGTCCAGGACCCCCGAGGGAAGGCACCCTCAGCACTCCGGGTTaGAGCACACTCCCAGAACCT | + |
Preference number: 5 (lower is better) Translates to: YVHSVLSAQRPGPPREGTLSTPG*STLPEP Trigger: AGGTTCTGGGAGTGTGCTCAAACCCGGAGTGCTGAG...GGTGCCTTCCCTCGGGGGTCCTGGACGCTGAGCAGACAGAACGGAATGGACATA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR CAA 90 bp | ATGGAGCAGATGGTGGTGGGTGCCTGGGGTTGGAGAAGCAGACGTGGCACAATGGTAGGAACCCGTGTGTaGGACCTCCAGGGGTTCCAG | + |
Preference number: 5 (lower is better) Translates to: MEQMVVGAWGWRSRRGTMVGTRV*DLQGFQ Trigger: CTGGAACCCCTGGAGGTCCAACACACGGGTTCCTAC...CATTGTGCCACGTCTGCTTCTCCAACCCCAGGCACCCACCACCATCTGCTCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR CAA 90 bp | CCTGGGGTTGGAGAAGCAGACGTGGCACAATGCGTGAGGGAGGATCACCAGCCAGTGACCGAGTCGCTGTaGTTTGGAGGAGGAGCCTGT | + |
Preference number: 5 (lower is better) Translates to: PGVGEADVAQCVREDHQPVTESL*FGGGAC Trigger: ACAGGCTCCTCCTCCAAACAACAGCGACTCGGTCAC...TGGCTGGTGATCCTCCCTCACGCATTGTGCCACGTCTGCTTCTCCAACCCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR CAA 90 bp | TATGTCCATTCCGTTCTGTCTGCTCAGCGTCCAGGACCCCCGAGGGAAGGCACCGTGACCGAGTCGCTGTaGTTTGGAGGAGGAGCCTGT | + |
Preference number: 5 (lower is better) Translates to: YVHSVLSAQRPGPPREGTVTESL*FGGGAC Trigger: ACAGGCTCCTCCTCCAAACAACAGCGACTCGGTCAC...GGTGCCTTCCCTCGGGGGTCCTGGACGCTGAGCAGACAGAACGGAATGGACATA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR CAA 90 bp | CGTGCCCAGGGAGCTGCCGGTGCCTTAGCATCTGAGCTGCAGCAGCTGAAGGAGTCAGTCTTTGTGGCGTaGTACAGGACAGTTCCTGTG | + |
Preference number: 5 (lower is better) Translates to: RAQGAAGALASELQQLKESVFVA*YRTVPV Trigger: CACAGGAACTGTCCTGTACAACGCCACAAAGACTGA...CTCCTTCAGCTGCTGCAGCTCAGATGCTAAGGCACCGGCAGCTCCCTGGGCACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | GGATGGAGCAGATGGTGGTGGGTGCCTGGGGTTGGAGAAGCAGACGTGGCACAAGTCCGTCCACTTTGGTaGGAAGGTGAGCTTGCTCTC | + |
Preference number: 5 (lower is better) Translates to: GWSRWWWVPGVGEADVAQVRPLW*EGELAL Trigger: GAGAGCAAGCTCACCTTCCAACCAAAGTGGACGGAC...TTGTGCCACGTCTGCTTCTCCAACCCCAGGCACCCACCACCATCTGCTCCATCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | AGCAGATGGTGGTGGGTGCCTGGGGTTGGAGAAGCAGACGTGGCACAATGCGTGGTCCGTCCACTTTGGTaGGAAGGTGAGCTTGCTCTC | + |
Preference number: 5 (lower is better) Translates to: SRWWWVPGVGEADVAQCVVRPLW*EGELAL Trigger: GAGAGCAAGCTCACCTTCCAACCAAAGTGGACGGAC...CACGCATTGTGCCACGTCTGCTTCTCCAACCCCAGGCACCCACCACCATCTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | AGCGTCCAGGACCCCCGAGGGAAGGCACCATCTCCACAGAAGGTCCAACATCTTCGCTCTGAGAGCACTTaGGAGGAGTGCTGGACTTGG | + |
Preference number: 5 (lower is better) Translates to: SVQDPRGKAPSPQKVQHLRSEST*EECWTW Trigger: CCAAGTCCAGCACTCCTCCAAAGTGCTCTCAGAGCG...AAGATGTTGGACCTTCTGTGGAGATGGTGCCTTCCCTCGGGGGTCCTGGACGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | AGCGTCCAGGACCCCCGAGGGAAGGCACCATCTCCACAGAAGGTCCAACATCTTCTCAGCACTCCGGGTTaGAGCACACTCCCAGAACCT | + |
Preference number: 5 (lower is better) Translates to: SVQDPRGKAPSPQKVQHLLSTPG*STLPEP Trigger: AGGTTCTGGGAGTGTGCTCAAACCCGGAGTGCTGAG...AAGATGTTGGACCTTCTGTGGAGATGGTGCCTTCCCTCGGGGGTCCTGGACGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS CCA 90 bp | TCTGGGGGCGTAGTGCACCGTGAGTTCCACTTCTTCCGACTCTCCTaGGCCTATGTCGTTGGAAGCCTGGCACCGGTATTTCCCTCTCAT | + |
Preference number: 5 (lower is better) Translates to: SGGVVHREFHFFRLS*AYVVGSLAPVFPSH Trigger: ATGAGAGGGAAATACCGGTGCCAGGCTTCCAACGACATAGGCCCAGGAGAGTCGGAAGAAGTGGAACTCACGGTGCACTACGCCCCCAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214289.2 |
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CDS-3UTR CAA 90 bp | TCTGCTCAGCGTCCAGGACCCCCGAGGGAAGGCACCATCTCCACAGAAGGTCCATCAGTCTTTGTGGCGTaGTACAGGACAGTTCCTGTG | + |
Preference number: 5 (lower is better) Translates to: SAQRPGPPREGTISTEGPSVFVA*YRTVPV Trigger: CACAGGAACTGTCCTGTACAACGCCACAAAGACTGA...TGGACCTTCTGTGGAGATGGTGCCTTCCCTCGGGGGTCCTGGACGCTGAGCAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | CAGGGAGCTGCCGGTGCCTTAGCATCTGAGCTGCAGCAGCTGAAGGAGTTGTCTGTCCGTCCACTTTGGTaGGAAGGTGAGCTTGCTCTC | + |
Preference number: 5 (lower is better) Translates to: QGAAGALASELQQLKELSVRPLW*EGELAL Trigger: GAGAGCAAGCTCACCTTCCAACCAAAGTGGACGGAC...AGACAACTCCTTCAGCTGCTGCAGCTCAGATGCTAAGGCACCGGCAGCTCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | GCCGGTGCCTTAGCATCTGAGCTGCAGCAGCTGAAGGAGTTGTCTTCTTTAGGCGTAGGAACCCGTGTGTaGGACCTCCAGGGGTTCCAG | + |
Preference number: 5 (lower is better) Translates to: AGALASELQQLKELSSLGVGTRV*DLQGFQ Trigger: CTGGAACCCCTGGAGGTCCAACACACGGGTTCCTAC...GCCTAAAGAAGACAACTCCTTCAGCTGCTGCAGCTCAGATGCTAAGGCACCGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 |
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CDS TCA 90 bp | GGCTTACCTTCAGTACCTTCACGTCTCTGGGGGCGTAGTGCACCGTaGGTTCCACTTCTTCCGACTCTCCTGGGCCTATGTCGTTGGAAG | + |
Preference number: 5 (lower is better) Translates to: GLPSVPSRLWGRSAP*VPLLPTLLGLCRWK Trigger: CTTCCAACGACATAGGCCCAGGAGAGTCGGAAGAAGTGGAACTCACGGTGCACTACGCCCCCAGAGACGTGAAGGTACTGAAGGTAAGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214289.2 |
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CDS-3UTR CAA 90 bp | GCCGGTGCCTTAGCATCTGAGCTGCAGCAGCTGAAGGAGTTGTCTTCTTTAGGCCGCTCTGAGAGCACTTaGGAGGAGTGCTGGACTTGG | + |
Preference number: 5 (lower is better) Translates to: AGALASELQQLKELSSLGRSEST*EECWTW Trigger: CCAAGTCCAGCACTCCTCCAAAGTGCTCTCAGAGCG...GCCTAAAGAAGACAACTCCTTCAGCTGCTGCAGCTCAGATGCTAAGGCACCGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | CGTGCCCAGGGAGCTGCCGGTGCCTTAGCATCTGAGCTGCAGCAGCTGAAGGAGTTCCCTCTCATGTCCTaGGTCACTGAATGCAGAATT | + |
Preference number: 5 (lower is better) Translates to: RAQGAAGALASELQQLKEFPLMS*VTECRI Trigger: AATTCTGCATTCAGTGACCAAGGACATGAGAGGGAA...CTCCTTCAGCTGCTGCAGCTCAGATGCTAAGGCACCGGCAGCTCCCTGGGCACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | AGCAGGCTGGCCTCGAACTCAGAAATCCGCCCGCCTCTGCCTCCTGAGTGCTGGTTCCCTCTCATGTCCTaGGTCACTGAATGCAGAATT | + |
Preference number: 5 (lower is better) Translates to: SRLASNSEIRPPLPPECWFPLMS*VTECRI Trigger: AATTCTGCATTCAGTGACCAAGGACATGAGAGGGAA...CCAGCACTCAGGAGGCAGAGGCGGGCGGATTTCTGAGTTCGAGGCCAGCCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | TACAACAGGAACACATCCAGCTGCAGTGAGGCACAGGATGGAGCAGATGGTGGTGTAGGAACCCGTGTGTaGGACCTCCAGGGGTTCCAG | + |
Preference number: 5 (lower is better) Translates to: YNRNTSSCSEAQDGADGGVGTRV*DLQGFQ Trigger: CTGGAACCCCTGGAGGTCCAACACACGGGTTCCTAC...ACCACCATCTGCTCCATCCTGTGCCTCACTGCAGCTGGATGTGTTCCTGTTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR CAA 90 bp | GACGATTACAACAGGAACACATCCAGCTGCAGTGAGGCACAGGATGGAGCAGATCCTGGGCCTATGTCGTaGGAAGCCTGGCACCGGTAT | + |
Preference number: 5 (lower is better) Translates to: DDYNRNTSSCSEAQDGADPGPMS*EAWHRY Trigger: ATACCGGTGCCAGGCTTCCAACGACATAGGCCCAGG...ATCTGCTCCATCCTGTGCCTCACTGCAGCTGGATGTGTTCCTGTTGTAATCGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | CAGGGAGCTGCCGGTGCCTTAGCATCTGAGCTGCAGCAGCTGAAGGAGTTGTCTTGTAGTTTGTTGCACTaGGACTGGCCAGTGACTCAC | + |
Preference number: 5 (lower is better) Translates to: QGAAGALASELQQLKELSCSLLH*DWPVTH Trigger: GTGAGTCACTGGCCAGTCCAAGTGCAACAAACTACA...AGACAACTCCTTCAGCTGCTGCAGCTCAGATGCTAAGGCACCGGCAGCTCCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 |
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CDS-3UTR CAA 90 bp | TTCTGTCCTTCCTGGGGATTTCTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTAGAGGAGGAGCCTGTGTaGCTGGGGTCCCTGCATCTC | + |
Preference number: 5 (lower is better) Translates to: FCPSWGFLPRARKWVVRLEEEPV*LGSLHL Trigger: GAGATGCAGGGACCCCAGCAACACAGGCTCCTCCTC...TAATCTTACTACCCACTTTCTGGCCCTGGGGAGAAATCCCCAGGAAGGACAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS CCA 90 bp | AGGAAACTCACAGTGCACCGTGAGTTCCACTTCTTCCGACTCTCCTaGGCCTATGTCGTTGGAAGCCTGGCACCGGTATTTCCCTCTCAT | + |
Preference number: 5 (lower is better) Translates to: RKLTVHREFHFFRLS*AYVVGSLAPVFPSH Trigger: ATGAGAGGGAAATACCGGTGCCAGGCTTCCAACGACATAGGCCCAGGAGAGTCGGAAGAAGTGGAACTCACGGTGCACTGTGAGTTTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190646.7 |
||
CDS-3UTR CAA 90 bp | GGATGGAGCAGATGGTGGTGGGTGCCTGGGGTTGGAGAAGCAGACGTGGCACAAGTTCCTGTGAATTTCTaGGTGGCCTTGTCAAACTCA | + |
Preference number: 5 (lower is better) Translates to: GWSRWWWVPGVGEADVAQVPVNF*VALSNS Trigger: TGAGTTTGACAAGGCCACCAAGAAATTCACAGGAAC...TTGTGCCACGTCTGCTTCTCCAACCCCAGGCACCCACCACCATCTGCTCCATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
||
CDS-3UTR CAA 90 bp | AGCAGGCTGGCCTCGAACTCAGAAATCCGCCCGCCTCTGCCTCCTGAGTGCTGGATTTTCAGGGTACAATaGTCTATTCTGTTCCCCAGA | + |
Preference number: 5 (lower is better) Translates to: SRLASNSEIRPPLPPECWIFRVQ*SILFPR Trigger: TCTGGGGAACAGAATAGACAATTGTACCCTGAAAAT...CCAGCACTCAGGAGGCAGAGGCGGGCGGATTTCTGAGTTCGAGGCCAGCCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | TCCTTACTTCTGTCCTTCCTGGGGATTTCTCCCCAGGGCCAGAAAGTGGGTAGTGTCCGTCCACTTTGGTaGGAAGGTGAGCTTGCTCTC | + |
Preference number: 5 (lower is better) Translates to: SLLLSFLGISPQGQKVGSVRPLW*EGELAL Trigger: GAGAGCAAGCTCACCTTCCAACCAAAGTGGACGGAC...ACTACCCACTTTCTGGCCCTGGGGAGAAATCCCCAGGAAGGACAGAAGTAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | GGATGGAGCAGATGGTGGTGGGTGCCTGGGGTTGGAGAAGCAGACGTGGCACAAGTCATGGTCACAGAATaGTTCTTTTCCACCTCTGTG | + |
Preference number: 5 (lower is better) Translates to: GWSRWWWVPGVGEADVAQVMVTE*FFSTSV Trigger: CACAGAGGTGGAAAAGAACAATTCTGTGACCATGAC...TTGTGCCACGTCTGCTTCTCCAACCCCAGGCACCCACCACCATCTGCTCCATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | GAAGTGTTAGTGACGATTACAACAGGAACACATCCAGCTGCAGTGAGGCACAGGCCTGGGCCTATGTCGTaGGAAGCCTGGCACCGGTAT | + |
Preference number: 5 (lower is better) Translates to: EVLVTITTGTHPAAVRHRPGPMS*EAWHRY Trigger: ATACCGGTGCCAGGCTTCCAACGACATAGGCCCAGG...CCTGTGCCTCACTGCAGCTGGATGTGTTCCTGTTGTAATCGTCACTAACACTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | TCCAGGACCCCCGAGGGAAGGCACCATCTCCACAGAAGGTCCAACATCTTTGTAACCAGGTGTAGTTTGTaGCACTTGGACTGGCCAGTG | + |
Preference number: 5 (lower is better) Translates to: SRTPEGRHHLHRRSNIFVTRCSL*HLDWPV Trigger: CACTGGCCAGTCCAAGTGCAACAAACTACACCTGGT...TACAAAGATGTTGGACCTTCTGTGGAGATGGTGCCTTCCCTCGGGGGTCCTGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR CAA 90 bp | GCCGGTGCCTTAGCATCTGAGCTGCAGCAGCTGAAGGAGTTGTCTTCTTTAGGCACCAGGTGTAGTTTGTaGCACTTGGACTGGCCAGTG | + |
Preference number: 5 (lower is better) Translates to: AGALASELQQLKELSSLGTRCSL*HLDWPV Trigger: CACTGGCCAGTCCAAGTGCAACAAACTACACCTGGT...GCCTAAAGAAGACAACTCCTTCAGCTGCTGCAGCTCAGATGCTAAGGCACCGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 |
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CDS-3UTR CAA 90 bp | GAAGTGTTAGTGACGATTACAACAGGAACACATCCAGCTGCAGTGAGGCACAGGGTAGGAACCCGTGTGTaGGACCTCCAGGGGTTCCAG | + |
Preference number: 5 (lower is better) Translates to: EVLVTITTGTHPAAVRHRVGTRV*DLQGFQ Trigger: CTGGAACCCCTGGAGGTCCAACACACGGGTTCCTAC...CCTGTGCCTCACTGCAGCTGGATGTGTTCCTGTTGTAATCGTCACTAACACTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR CAA 90 bp | ATTTCTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTAGTGAACGGGGTAGAGTAGAGGAGGAGCCTGTGTaGCTGGGGTCCCTGCATCTC | + |
Preference number: 5 (lower is better) Translates to: ISPQGQKVGSKISERGRVEEEPV*LGSLHL Trigger: GAGATGCAGGGACCCCAGCAACACAGGCTCCTCCTC...TACTCTACCCCGTTCACTAATCTTACTACCCACTTTCTGGCCCTGGGGAGAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR CAA 90 bp | CTTCTGTCCTTCCTGGGGATTTCTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTGTGACCGAGTCGCTGTaGTTTGGAGGAGGAGCCTGT | + |
Preference number: 5 (lower is better) Translates to: LLSFLGISPQGQKVGSKIVTESL*FGGGAC Trigger: ACAGGCTCCTCCTCCAAACAACAGCGACTCGGTCAC...AATCTTACTACCCACTTTCTGGCCCTGGGGAGAAATCCCCAGGAAGGACAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR CAA 90 bp | CAGATAGTCAGGCAGAAGCCTAGTCCCAAGGCGACCCGCTTGCCGATGGTCTCTAACTCTGGTCAGAAGTaGTTACTGAGGGGTGAGAAC | + |
Preference number: 5 (lower is better) Translates to: QIVRQKPSPKATRLPMVSNSGQK*LLRGEN Trigger: GTTCTCACCCCTCAGTAACAACTTCTGACCAGAGTT...AGAGACCATCGGCAAGCGGGTCGCCTTGGGACTAGGCTTCTGCCTGACTATCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |
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CDS-3UTR CAA 90 bp | AGCGTCCAGGACCCCCGAGGGAAGGCACCATCTCCACAGAAGGTCCAACATCTTGTCATGGTCACAGAATaGTTCTTTTCCACCTCTGTG | + |
Preference number: 5 (lower is better) Translates to: SVQDPRGKAPSPQKVQHLVMVTE*FFSTSV Trigger: CACAGAGGTGGAAAAGAACAATTCTGTGACCATGAC...AAGATGTTGGACCTTCTGTGGAGATGGTGCCTTCCCTCGGGGGTCCTGGACGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | CAGGGAGCTGCCGGTGCCTTAGCATCTGAGCTGCAGCAGCTGAAGGAGTTGTCTGTCATGGTCACAGAATaGTTCTTTTCCACCTCTGTG | + |
Preference number: 5 (lower is better) Translates to: QGAAGALASELQQLKELSVMVTE*FFSTSV Trigger: CACAGAGGTGGAAAAGAACAATTCTGTGACCATGAC...AGACAACTCCTTCAGCTGCTGCAGCTCAGATGCTAAGGCACCGGCAGCTCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | CAGGGAGCTGCCGGTGCCTTAGCATCTGAGCTGCAGCAGCTGAAGGAGTTGTCTTTCCCTCTCATGTCCTaGGTCACTGAATGCAGAATT | + |
Preference number: 5 (lower is better) Translates to: QGAAGALASELQQLKELSFPLMS*VTECRI Trigger: AATTCTGCATTCAGTGACCAAGGACATGAGAGGGAA...AGACAACTCCTTCAGCTGCTGCAGCTCAGATGCTAAGGCACCGGCAGCTCCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | AGCATAATGGACATCCAGCTTAGCTTCCTGGTCTATCTTTCCATGACCCAGACGCCTGGGCCTATGTCGTaGGAAGCCTGGCACCGGTAT | + |
Preference number: 5 (lower is better) Translates to: SIMDIQLSFLVYLSMTQTPGPMS*EAWHRY Trigger: ATACCGGTGCCAGGCTTCCAACGACATAGGCCCAGG...CGTCTGGGTCATGGAAAGATAGACCAGGAAGCTAAGCTGGATGTCCATTATGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190455.2 ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | TTCTGTCCTTCCTGGGGATTTCTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTACTCAGCACTCCGGGTTaGAGCACACTCCCAGAACCT | + |
Preference number: 5 (lower is better) Translates to: FCPSWGFLPRARKWVVRLLSTPG*STLPEP Trigger: AGGTTCTGGGAGTGTGCTCAAACCCGGAGTGCTGAG...TAATCTTACTACCCACTTTCTGGCCCTGGGGAGAAATCCCCAGGAAGGACAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR CAA 90 bp | GACGATTACAACAGGAACACATCCAGCTGCAGTGAGGCACAGGATGGAGCAGATCACGAACACTTGTGGTaGCAGGCAGCACAGCTGACA | + |
Preference number: 5 (lower is better) Translates to: DDYNRNTSSCSEAQDGADHEHLW*QAAQLT Trigger: TGTCAGCTGTGCTGCCTGCAACCACAAGTGTTCGTG...ATCTGCTCCATCCTGTGCCTCACTGCAGCTGGATGTGTTCCTGTTGTAATCGTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR CAA 90 bp | CGGGGTAGAGTATCAAGGGGTCAGAGAAGAAGTGTTAGTGACGATTACAACAGGGTAGGAACCCGTGTGTaGGACCTCCAGGGGTTCCAG | + |
Preference number: 5 (lower is better) Translates to: RGRVSRGQRRSVSDDYNRVGTRV*DLQGFQ Trigger: CTGGAACCCCTGGAGGTCCAACACACGGGTTCCTAC...CCTGTTGTAATCGTCACTAACACTTCTTCTCTGACCCCTTGATACTCTACCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR CAA 90 bp | CTTATTGAATTATATATGTCCATTCCGTTCTGTCTGCTCAGCGTCCAGGACCCCGAGGAGGAGCCTGTGTaGCTGGGGTCCCTGCATCTC | + |
Preference number: 5 (lower is better) Translates to: LIELYMSIPFCLLSVQDPEEEPV*LGSLHL Trigger: GAGATGCAGGGACCCCAGCAACACAGGCTCCTCCTC...GGGGTCCTGGACGCTGAGCAGACAGAACGGAATGGACATATATAATTCAATAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR CAA 90 bp | TCAGGCAGAAGCCTAGTCCCAAGGCGACCCGCTTGCCGATGGTCTCTGGACTGTATTTTCAGGGTACAATaGTCTATTCTGTTCCCCAGA | + |
Preference number: 5 (lower is better) Translates to: SGRSLVPRRPACRWSLDCIFRVQ*SILFPR Trigger: TCTGGGGAACAGAATAGACAATTGTACCCTGAAAAT...ACAGTCCAGAGACCATCGGCAAGCGGGTCGCCTTGGGACTAGGCTTCTGCCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | TCCTTCCTGGGGATTTCTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTAGTGAAGTCCGTCCACTTTGGTaGGAAGGTGAGCTTGCTCTC | + |
Preference number: 5 (lower is better) Translates to: SFLGISPQGQKVGSKISEVRPLW*EGELAL Trigger: GAGAGCAAGCTCACCTTCCAACCAAAGTGGACGGAC...TTCACTAATCTTACTACCCACTTTCTGGCCCTGGGGAGAAATCCCCAGGAAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | GAAGTGTTAGTGACGATTACAACAGGAACACATCCAGCTGCAGTGAGGCACAGGGTCCGTCCACTTTGGTaGGAAGGTGAGCTTGCTCTC | + |
Preference number: 5 (lower is better) Translates to: EVLVTITTGTHPAAVRHRVRPLW*EGELAL Trigger: GAGAGCAAGCTCACCTTCCAACCAAAGTGGACGGAC...CCTGTGCCTCACTGCAGCTGGATGTGTTCCTGTTGTAATCGTCACTAACACTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | CGGGGTAGAGTATCAAGGGGTCAGAGAAGAAGTGTTAGTGACGATTACAACAGGCGCTCTGAGAGCACTTaGGAGGAGTGCTGGACTTGG | + |
Preference number: 5 (lower is better) Translates to: RGRVSRGQRRSVSDDYNRRSEST*EECWTW Trigger: CCAAGTCCAGCACTCCTCCAAAGTGCTCTCAGAGCG...CCTGTTGTAATCGTCACTAACACTTCTTCTCTGACCCCTTGATACTCTACCCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | ATTTCTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTAGTGAACGGGGTAGAGTACGCTCTGAGAGCACTTaGGAGGAGTGCTGGACTTGG | + |
Preference number: 5 (lower is better) Translates to: ISPQGQKVGSKISERGRVRSEST*EECWTW Trigger: CCAAGTCCAGCACTCCTCCAAAGTGCTCTCAGAGCG...TACTCTACCCCGTTCACTAATCTTACTACCCACTTTCTGGCCCTGGGGAGAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | TACAACAGGAACACATCCAGCTGCAGTGAGGCACAGGATGGAGCAGATGGTGGTTGTAGTTTGTTGCACTaGGACTGGCCAGTGACTCAC | + |
Preference number: 5 (lower is better) Translates to: YNRNTSSCSEAQDGADGGCSLLH*DWPVTH Trigger: GTGAGTCACTGGCCAGTCCAAGTGCAACAAACTACA...ACCACCATCTGCTCCATCCTGTGCCTCACTGCAGCTGGATGTGTTCCTGTTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR CAA 90 bp | CTTCTGTCCTTCCTGGGGATTTCTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTACCAGGTGTAGTTTGTaGCACTTGGACTGGCCAGTG | + |
Preference number: 5 (lower is better) Translates to: LLSFLGISPQGQKVGSKITRCSL*HLDWPV Trigger: CACTGGCCAGTCCAAGTGCAACAAACTACACCTGGT...AATCTTACTACCCACTTTCTGGCCCTGGGGAGAAATCCCCAGGAAGGACAGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR CAA 90 bp | GACGATTACAACAGGAACACATCCAGCTGCAGTGAGGCACAGGATGGAGCAGATACCAGGTGTAGTTTGTaGCACTTGGACTGGCCAGTG | + |
Preference number: 5 (lower is better) Translates to: DDYNRNTSSCSEAQDGADTRCSL*HLDWPV Trigger: CACTGGCCAGTCCAAGTGCAACAAACTACACCTGGT...ATCTGCTCCATCCTGTGCCTCACTGCAGCTGGATGTGTTCCTGTTGTAATCGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR CAA 90 bp | CGAGGGAAGGCACCATCTCCACAGAAGGTCCAACATCTTTGTAGAAGAAAAGCCCACGAACACTTGTGGTaGCAGGCAGCACAGCTGACA | + |
Preference number: 5 (lower is better) Translates to: RGKAPSPQKVQHLCRRKAHEHLW*QAAQLT Trigger: TGTCAGCTGTGCTGCCTGCAACCACAAGTGTTCGTG...GGCTTTTCTTCTACAAAGATGTTGGACCTTCTGTGGAGATGGTGCCTTCCCTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR CAA 90 bp | TTTCTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTAGTGAACGGGGTAGAGTATGTGACCGAGTCGCTGTaGTTTGGAGGAGGAGCCTGT | + |
Preference number: 5 (lower is better) Translates to: FLPRARKWVVRLVNGVEYVTESL*FGGGAC Trigger: ACAGGCTCCTCCTCCAAACAACAGCGACTCGGTCAC...ATACTCTACCCCGTTCACTAATCTTACTACCCACTTTCTGGCCCTGGGGAGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR CAA 90 bp | CTTCTGTCCTTCCTGGGGATTTCTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTTCAGTCTTTGTGGCGTaGTACAGGACAGTTCCTGTG | + |
Preference number: 5 (lower is better) Translates to: LLSFLGISPQGQKVGSKISVFVA*YRTVPV Trigger: CACAGGAACTGTCCTGTACAACGCCACAAAGACTGA...AATCTTACTACCCACTTTCTGGCCCTGGGGAGAAATCCCCAGGAAGGACAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | GACATCCAGCTTAGCTTCCTGGTCTATCTTTCCATGACCCAGACGGTTCTCTGCTCAGTCTTTGTGGCGTaGTACAGGACAGTTCCTGTG | + |
Preference number: 5 (lower is better) Translates to: DIQLSFLVYLSMTQTVLCSVFVA*YRTVPV Trigger: CACAGGAACTGTCCTGTACAACGCCACAAAGACTGA...GCAGAGAACCGTCTGGGTCATGGAAAGATAGACCAGGAAGCTAAGCTGGATGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | CTTATTGAATTATATATGTCCATTCCGTTCTGTCTGCTCAGCGTCCAGGACCCCCGCTCTGAGAGCACTTaGGAGGAGTGCTGGACTTGG | + |
Preference number: 5 (lower is better) Translates to: LIELYMSIPFCLLSVQDPRSEST*EECWTW Trigger: CCAAGTCCAGCACTCCTCCAAAGTGCTCTCAGAGCG...GGGGTCCTGGACGCTGAGCAGACAGAACGGAATGGACATATATAATTCAATAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | GACGATTACAACAGGAACACATCCAGCTGCAGTGAGGCACAGGATGGAGCAGATTGTAGTTTGTTGCACTaGGACTGGCCAGTGACTCAC | + |
Preference number: 5 (lower is better) Translates to: DDYNRNTSSCSEAQDGADCSLLH*DWPVTH Trigger: GTGAGTCACTGGCCAGTCCAAGTGCAACAAACTACA...ATCTGCTCCATCCTGTGCCTCACTGCAGCTGGATGTGTTCCTGTTGTAATCGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR CAA 90 bp | ACCCCCGAGGGAAGGCACCATCTCCACAGAAGGTCCAACATCTTTGTAGAAGAATGTAGTTTGTTGCACTaGGACTGGCCAGTGACTCAC | + |
Preference number: 5 (lower is better) Translates to: TPEGRHHLHRRSNIFVEECSLLH*DWPVTH Trigger: GTGAGTCACTGGCCAGTCCAAGTGCAACAAACTACA...TTCTTCTACAAAGATGTTGGACCTTCTGTGGAGATGGTGCCTTCCCTCGGGGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR CAA 90 bp | GACCCCCGAGGGAAGGCACCATCTCCACAGAAGGTCCAACATCTTTGTAGAAGATTGGGTAGTGGAGTTTaGTACTTGCAAGGAATCCTG | + |
Preference number: 5 (lower is better) Translates to: DPRGKAPSPQKVQHLCRRLGSGV*YLQGIL Trigger: CAGGATTCCTTGCAAGTACAAAACTCCACTACCCAA...TCTTCTACAAAGATGTTGGACCTTCTGTGGAGATGGTGCCTTCCCTCGGGGGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | TCCTTACTTCTGTCCTTCCTGGGGATTTCTCCCCAGGGCCAGAAAGTGGGTAGTTTGGGTAGTGGAGTTTaGTACTTGCAAGGAATCCTG | + |
Preference number: 5 (lower is better) Translates to: SLLLSFLGISPQGQKVGSLGSGV*YLQGIL Trigger: CAGGATTCCTTGCAAGTACAAAACTCCACTACCCAA...ACTACCCACTTTCTGGCCCTGGGGAGAAATCCCCAGGAAGGACAGAAGTAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | TTATATATGTCCATTCCGTTCTGTCTGCTCAGCGTCCAGGACCCCCGAGGGAAGTTGGGTAGTGGAGTTTaGTACTTGCAAGGAATCCTG | + |
Preference number: 5 (lower is better) Translates to: LYMSIPFCLLSVQDPRGKLGSGV*YLQGIL Trigger: CAGGATTCCTTGCAAGTACAAAACTCCACTACCCAA...CTTCCCTCGGGGGTCCTGGACGCTGAGCAGACAGAACGGAATGGACATATATAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | ACAGCTGACAGGCATGGAATCCCATGTCACTTTCTGAATCCTCAGCACTCCGGGGTTCCTGTGAATTTCTaGGTGGCCTTGTCAAACTCA | + |
Preference number: 5 (lower is better) Translates to: TADRHGIPCHFLNPQHSGVPVNF*VALSNS Trigger: TGAGTTTGACAAGGCCACCAAGAAATTCACAGGAAC...CCCGGAGTGCTGAGGATTCAGAAAGTGACATGGGATTCCATGCCTGTCAGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | TACAACAGGAACACATCCAGCTGCAGTGAGGCACAGGATGGAGCAGATGGTGGTTTCCCTCTCATGTCCTaGGTCACTGAATGCAGAATT | + |
Preference number: 5 (lower is better) Translates to: YNRNTSSCSEAQDGADGGFPLMS*VTECRI Trigger: AATTCTGCATTCAGTGACCAAGGACATGAGAGGGAA...ACCACCATCTGCTCCATCCTGTGCCTCACTGCAGCTGGATGTGTTCCTGTTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | TTTCTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTAGTGAACGGGGTAGAGTATACCAGGTGTAGTTTGTaGCACTTGGACTGGCCAGTG | + |
Preference number: 5 (lower is better) Translates to: FLPRARKWVVRLVNGVEYTRCSL*HLDWPV Trigger: CACTGGCCAGTCCAAGTGCAACAAACTACACCTGGT...ATACTCTACCCCGTTCACTAATCTTACTACCCACTTTCTGGCCCTGGGGAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR CAA 90 bp | TTTCTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTAGTGAACGGGGTAGAGTATTCAGTCTTTGTGGCGTaGTACAGGACAGTTCCTGTG | + |
Preference number: 5 (lower is better) Translates to: FLPRARKWVVRLVNGVEYSVFVA*YRTVPV Trigger: CACAGGAACTGTCCTGTACAACGCCACAAAGACTGA...ATACTCTACCCCGTTCACTAATCTTACTACCCACTTTCTGGCCCTGGGGAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | GCCGGTGCCTTAGCATCTGAGCTGCAGCAGCTGAAGGAGTTGTCTTCTTTAGGCATTTTCAGGGTACAATaGTCTATTCTGTTCCCCAGA | + |
Preference number: 5 (lower is better) Translates to: AGALASELQQLKELSSLGIFRVQ*SILFPR Trigger: TCTGGGGAACAGAATAGACAATTGTACCCTGAAAAT...GCCTAAAGAAGACAACTCCTTCAGCTGCTGCAGCTCAGATGCTAAGGCACCGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | GTAGAGTATCAAGGGGTCAGAGAAGAAGTGTTAGTGACGATTACAACAGGAACACGCTCTGAGAGCACTTaGGAGGAGTGCTGGACTTGG | + |
Preference number: 5 (lower is better) Translates to: VEYQGVREEVLVTITTGTRSEST*EECWTW Trigger: CCAAGTCCAGCACTCCTCCAAAGTGCTCTCAGAGCG...TGTTCCTGTTGTAATCGTCACTAACACTTCTTCTCTGACCCCTTGATACTCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | GACATCCAGCTTAGCTTCCTGGTCTATCTTTCCATGACCCAGACGGTTCTCTGCGTCATGGTCACAGAATaGTTCTTTTCCACCTCTGTG | + |
Preference number: 5 (lower is better) Translates to: DIQLSFLVYLSMTQTVLCVMVTE*FFSTSV Trigger: CACAGAGGTGGAAAAGAACAATTCTGTGACCATGAC...GCAGAGAACCGTCTGGGTCATGGAAAGATAGACCAGGAAGCTAAGCTGGATGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000190455.2 ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | GATTGGTGTGAAGCTCTGAATCACTGTGGTCACCGCCTTGGGAGCATAATGGACGTCATGGTCACAGAATaGTTCTTTTCCACCTCTGTG | + |
Preference number: 5 (lower is better) Translates to: DWCEALNHCGHRLGSIMDVMVTE*FFSTSV Trigger: CACAGAGGTGGAAAAGAACAATTCTGTGACCATGAC...GTCCATTATGCTCCCAAGGCGGTGACCACAGTGATTCAGAGCTTCACACCAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000190455.2 ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | TTGTACCTACAGACCAGGGTCACACTGTCTCCTTCCAGGATTGGTGTGAAGCTCTTCCCTCTCATGTCCTaGGTCACTGAATGCAGAATT | + |
Preference number: 5 (lower is better) Translates to: LYLQTRVTLSPSRIGVKLFPLMS*VTECRI Trigger: AATTCTGCATTCAGTGACCAAGGACATGAGAGGGAA...GAGCTTCACACCAATCCTGGAAGGAGACAGTGTGACCCTGGTCTGTAGGTACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190455.2 ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | TTTCTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTAGTGAACGGGGTAGAGTATTGTAGTTTGTTGCACTaGGACTGGCCAGTGACTCAC | + |
Preference number: 5 (lower is better) Translates to: FLPRARKWVVRLVNGVEYCSLLH*DWPVTH Trigger: GTGAGTCACTGGCCAGTCCAAGTGCAACAAACTACA...ATACTCTACCCCGTTCACTAATCTTACTACCCACTTTCTGGCCCTGGGGAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 |
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CDS-3UTR CAA 90 bp | TCCTTCCTGGGGATTTCTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTAGTGAAGTTCCTGTGAATTTCTaGGTGGCCTTGTCAAACTCA | + |
Preference number: 5 (lower is better) Translates to: SFLGISPQGQKVGSKISEVPVNF*VALSNS Trigger: TGAGTTTGACAAGGCCACCAAGAAATTCACAGGAAC...TTCACTAATCTTACTACCCACTTTCTGGCCCTGGGGAGAAATCCCCAGGAAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | TTCTGTCCTTCCTGGGGATTTCTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTAGTTCCTGTGAATTTCTaGGTGGCCTTGTCAAACTCA | + |
Preference number: 5 (lower is better) Translates to: FCPSWGFLPRARKWVVRLVPVNF*VALSNS Trigger: TGAGTTTGACAAGGCCACCAAGAAATTCACAGGAAC...TAATCTTACTACCCACTTTCTGGCCCTGGGGAGAAATCCCCAGGAAGGACAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | TCCTTACTTCTGTCCTTCCTGGGGATTTCTCCCCAGGGCCAGAAAGTGGGTAGTATTTTCAGGGTACAATaGTCTATTCTGTTCCCCAGA | + |
Preference number: 5 (lower is better) Translates to: SLLLSFLGISPQGQKVGSIFRVQ*SILFPR Trigger: TCTGGGGAACAGAATAGACAATTGTACCCTGAAAAT...ACTACCCACTTTCTGGCCCTGGGGAGAAATCCCCAGGAAGGACAGAAGTAAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | GAAGTGTTAGTGACGATTACAACAGGAACACATCCAGCTGCAGTGAGGCACAGGGTCATGGTCACAGAATaGTTCTTTTCCACCTCTGTG | + |
Preference number: 5 (lower is better) Translates to: EVLVTITTGTHPAAVRHRVMVTE*FFSTSV Trigger: CACAGAGGTGGAAAAGAACAATTCTGTGACCATGAC...CCTGTGCCTCACTGCAGCTGGATGTGTTCCTGTTGTAATCGTCACTAACACTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | TTCTTTAGGCTCAAGAACCTGAAACAGCAGCTGCTACCCACCTCAGTGCTTGAGTTCCCTCTCATGTCCTaGGTCACTGAATGCAGAATT | + |
Preference number: 5 (lower is better) Translates to: FFRLKNLKQQLLPTSVLEFPLMS*VTECRI Trigger: AATTCTGCATTCAGTGACCAAGGACATGAGAGGGAA...CTCAAGCACTGAGGTGGGTAGCAGCTGCTGTTTCAGGTTCTTGAGCCTAAAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | ATTTCTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTAGTGAACGGGGTAGAGTATTGGGTAGTGGAGTTTaGTACTTGCAAGGAATCCTG | + |
Preference number: 5 (lower is better) Translates to: ISPQGQKVGSKISERGRVLGSGV*YLQGIL Trigger: CAGGATTCCTTGCAAGTACAAAACTCCACTACCCAA...TACTCTACCCCGTTCACTAATCTTACTACCCACTTTCTGGCCCTGGGGAGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | TTTCCAATACAGGGTTTCCTTGAAAAACCCTGGCTGTCCTGGAACCCACTCTGTTTGGGTAGTGGAGTTTaGTACTTGCAAGGAATCCTG | + |
Preference number: 5 (lower is better) Translates to: FPIQGFLEKPWLSWNPLCLGSGV*YLQGIL Trigger: CAGGATTCCTTGCAAGTACAAAACTCCACTACCCAA...ACAGAGTGGGTTCCAGGACAGCCAGGGTTTTTCAAGGAAACCCTGTATTGGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | TTTCTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTAGTGAACGGGGTAGAGTATGTTCCTGTGAATTTCTaGGTGGCCTTGTCAAACTCA | + |
Preference number: 5 (lower is better) Translates to: FLPRARKWVVRLVNGVEYVPVNF*VALSNS Trigger: TGAGTTTGACAAGGCCACCAAGAAATTCACAGGAAC...ATACTCTACCCCGTTCACTAATCTTACTACCCACTTTCTGGCCCTGGGGAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | GCAGCTGAAGGAGTTGTCTTCTTTAGGCTCAAGAACCTGAAACAGCAGCTGCTAGTTCCTGTGAATTTCTaGGTGGCCTTGTCAAACTCA | + |
Preference number: 5 (lower is better) Translates to: AAEGVVFFRLKNLKQQLLVPVNF*VALSNS Trigger: TGAGTTTGACAAGGCCACCAAGAAATTCACAGGAAC...TAGCAGCTGCTGTTTCAGGTTCTTGAGCCTAAAGAAGACAACTCCTTCAGCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190617.7 ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | GGTAGTAAGATTAGTGAACGGGGTAGAGTATCAAGGGGTCAGAGAAGAAGTGTTTCAGTCTTTGTGGCGTaGTACAGGACAGTTCCTGTG | + |
Preference number: 5 (lower is better) Translates to: GSKISERGRVSRGQRRSVSVFVA*YRTVPV Trigger: CACAGGAACTGTCCTGTACAACGCCACAAAGACTGA...AACACTTCTTCTCTGACCCCTTGATACTCTACCCCGTTCACTAATCTTACTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | ATTTCTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTAGTGAACGGGGTAGAGTATTCCCTCTCATGTCCTaGGTCACTGAATGCAGAATT | + |
Preference number: 5 (lower is better) Translates to: ISPQGQKVGSKISERGRVFPLMS*VTECRI Trigger: AATTCTGCATTCAGTGACCAAGGACATGAGAGGGAA...TACTCTACCCCGTTCACTAATCTTACTACCCACTTTCTGGCCCTGGGGAGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | TACCAACACTGTGAGACAATGGTGCCTCTAGGGACTGATTTGATAATGAGATTACACGAACACTTGTGGTaGCAGGCAGCACAGCTGACA | + |
Preference number: 5 (lower is better) Translates to: YQHCETMVPLGTDLIMRLHEHLW*QAAQLT Trigger: TGTCAGCTGTGCTGCCTGCAACCACAAGTGTTCGTG...TAATCTCATTATCAAATCAGTCCCTAGAGGCACCATTGTCTCACAGTGTTGGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019248.13 |
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CDS-3UTR CAA 90 bp | CTCCCCAGGGCCAGAAAGTGGGTAGTAAGATTAGTGAACGGGGTAGAGTATCAAATTTTCAGGGTACAATaGTCTATTCTGTTCCCCAGA | + |
Preference number: 5 (lower is better) Translates to: LPRARKWVVRLVNGVEYQIFRVQ*SILFPR Trigger: TCTGGGGAACAGAATAGACAATTGTACCCTGAAAAT...TTGATACTCTACCCCGTTCACTAATCTTACTACCCACTTTCTGGCCCTGGGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS-3UTR CAA 90 bp | GTAGAGTATCAAGGGGTCAGAGAAGAAGTGTTAGTGACGATTACAACAGGAACAGTCATGGTCACAGAATaGTTCTTTTCCACCTCTGTG | + |
Preference number: 5 (lower is better) Translates to: VEYQGVREEVLVTITTGTVMVTE*FFSTSV Trigger: CACAGAGGTGGAAAAGAACAATTCTGTGACCATGAC...TGTTCCTGTTGTAATCGTCACTAACACTTCTTCTCTGACCCCTTGATACTCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000189718.7 ENSMUST00000190646.7 |
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CDS TCA 72 bp | GTGGGGATGATCCTGGCAGGCTGCGGGAGTAGACAGTaGGGGTGCTGGGTGGTGACTCTCCTGTGCCTATCC | + |
Preference number: 6 (lower is better) Translates to: VGMILAGCGSRQ*GCWVVTLLCLS Trigger: GGATAGGCACAGGAGAGTCACCACCCAGCACCCTCACTGTCTACTCCCGCAGCCTGCCAGGATCATCCCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214289.2 |
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CDS TCA 72 bp | CAGGCTGCGGGAGTAGACAGTGAGGGTGCTGGGTGGTaGCTCTCCTGTGCCTATCCCATTGGTCCCTTTGCA | + |
Preference number: 6 (lower is better) Translates to: QAAGVDSEGAGW*LSCAYPIGPFA Trigger: TGCAAAGGGACCAATGGGATAGGCACAGGAGAGTCACCACCCAGCACCCTCACTGTCTACTCCCGCAGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214289.2 |
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CDS TCA 72 bp | TCTAAGGATCAAGGGGTTTGTGAGGGCAGGTGGGGATaGTCCTGGCAGGCTGCGGGAGTAGACAGTGAGGGT | + |
Preference number: 6 (lower is better) Translates to: SKDQGVCEGRWG*SWQAAGVDSEG Trigger: ACCCTCACTGTCTACTCCCGCAGCCTGCCAGGATCATCCCCACCTGCCCTCACAAACCCCTTGATCCTTAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214289.2 |
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CDS CAA 90 bp | CCTCCCAGGCAAAGAGGGTTTGGGGATGGTCAACGGTCCAATCATTaGCTGAGCTGTACCGAGCCGAAGCCACGTGTCCTAGGATCAAGA | + |
Preference number: 6 (lower is better) Translates to: PPRQRGFGDGQRSNH*LSCTEPKPRVLGSR Trigger: TCTTGATCCTAGGACACGTGGCTTCGGCTCGGTACAGCTCAGCAAATGATTGGACCGTTGACCATCCCCAAACCCTCTTTGCCTGGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000019248.13 ENSMUST00000108125.9 ENSMUST00000186154.7 ENSMUST00000188157.7 ENSMUST00000189718.7 ENSMUST00000190617.7 ENSMUST00000190646.7 ENSMUST00000190753.2 ENSMUST00000214289.2 |
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CDS TCA 72 bp | AGGCCACAACTCTGGTCAGAAGTTGTTACTGAGGGGTaGGAACTTCCACTGGAAGTAGGAGAGGGAGACACT | + |
Preference number: 6 (lower is better) Translates to: RPQLWSEVVTEG*ELPLEVGEGDT Trigger: AGTGTCTCCCTCTCCTACTTCCAGTGGAAGTTCTCACCCCTCAGTAACAACTTCTGACCAGAGTTGTGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187989.7 |