Pregenerated sensors for CD209G (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079168Ensembl transcript IDs: ENSMUST00000130372.3
Found 26 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGACTCTCTCAGGATCTCAGAGGTCTCAGAACAGGGGCACTGGGATaGACAAGGCAGCTGGAACGGGAGCAGAGTGCCCCCAAGTTGCCT | + |
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Preference number: 1 (lower is better) Translates to: GLSQDLRGLRTGALG*TRQLEREQSAPKLP Trigger: AGGCAACTTGGGGGCACTCTGCTCCCGTTCCAGCTGCCTTGTTCATCCCAGTGCCCCTGTTCTGAGACCTCTGAGATCCTGAGAGAGTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000130372.3 |
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| 3UTR CCA 90 bp | CTCAGGGACTCTCTCAGGATCTCAGAGGTCTCAGAACAGGGGCACTaGGATGAACAAGGCAGCTGGAACGGGAGCAGAGTGCCCCCAAGT | + |
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Preference number: 1 (lower is better) Translates to: LRDSLRISEVSEQGH*DEQGSWNGSRVPPS Trigger: ACTTGGGGGCACTCTGCTCCCGTTCCAGCTGCCTTGTTCATCCCAGTGCCCCTGTTCTGAGACCTCTGAGATCCTGAGAGAGTCCCTGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000130372.3 |
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| 3UTR-3UTR CCA 90 bp | GGGATGGGACTCAGAGAGCCACCCATGCTAGGCAAACTGGGGTGTATCATTGAGTCAGAACAGGGGCACTaGGATGAACAAGGCAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: GMGLREPPMLGKLGCIIESEQGH*DEQGSW Trigger: CCAGCTGCCTTGTTCATCCCAGTGCCCCTGTTCTGA...CTCAATGATACACCCCAGTTTGCCTAGCATGGGTGGCTCTCTGAGTCCCATCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130372.3 |
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| 3UTR GCA 72 bp | ACTGGGATGAACAAGGCAGCTGGAACGGGAGCAGAGTaGCCCCAAGTTGCCTGTGTGGCTAGGGGAGCACAG | + |
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Preference number: 3 (lower is better) Translates to: TGMNKAAGTGAE*PQVACVARGAQ Trigger: CTGTGCTCCCCTAGCCACACAGGCAACTTGGGGGCACTCTGCTCCCGTTCCAGCTGCCTTGTTCATCCCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130372.3 |
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| 3UTR CCA 72 bp | GTCTCAGAACAGGGGCACTGGGATGAACAAGGCAGCTaGAACGGGAGCAGAGTGCCCCCAAGTTGCCTGTGT | + |
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Preference number: 3 (lower is better) Translates to: VSEQGHWDEQGS*NGSRVPPSCLC Trigger: ACACAGGCAACTTGGGGGCACTCTGCTCCCGTTCCAGCTGCCTTGTTCATCCCAGTGCCCCTGTTCTGAGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000130372.3 |
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| 3UTR CCA 72 bp | TCTCTCAGGATCTCAGAGGTCTCAGAACAGGGGCACTaGGATGAACAAGGCAGCTGGAACGGGAGCAGAGTG | + |
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Preference number: 3 (lower is better) Translates to: SLRISEVSEQGH*DEQGSWNGSRV Trigger: CACTCTGCTCCCGTTCCAGCTGCCTTGTTCATCCCAGTGCCCCTGTTCTGAGACCTCTGAGATCCTGAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130372.3 |
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| CDS-3UTR TCA 90 bp | CTCAGGATCTCAGAGGTCTCAGAACAGGGGCACTGGGATGAACAAGGCAGCTGGCCGATCCAGGTGAGCTaGTTCTTTCTGATGTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: LRISEVSEQGHWDEQGSWPIQVS*FFLMCQ Trigger: CTGGCACATCAGAAAGAATCAGCTCACCTGGATCGG...CCAGCTGCCTTGTTCATCCCAGTGCCCCTGTTCTGAGACCTCTGAGATCCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130372.3 |
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| CDS-3UTR GCA 90 bp | GAACAGGGGCACTGGGATGAACAAGGCAGCTGGAACGGGAGCAGAGTGCCCCCAGACCCAGAAGTTGTTTaGAGTACAACGGCTGTCATT | + |
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Preference number: 4 (lower is better) Translates to: EQGHWDEQGSWNGSRVPPDPEVV*STTAVI Trigger: AATGACAGCCGTTGTACTGCAAACAACTTCTGGGTC...TGGGGGCACTCTGCTCCCGTTCCAGCTGCCTTGTTCATCCCAGTGCCCCTGTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000130372.3 |
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| CDS-3UTR CCA 90 bp | ATCTCAGAGGTCTCAGAACAGGGGCACTGGGATGAACAAGGCAGCTGGAACGGGCAACCTTGTCCAAGCTaGAGCTACCCTGCTGATCCT | + |
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Preference number: 4 (lower is better) Translates to: ISEVSEQGHWDEQGSWNGQPCPS*SYPADP Trigger: AGGATCAGCAGGGTAGCTCCAGCTTGGACAAGGTTG...CCCGTTCCAGCTGCCTTGTTCATCCCAGTGCCCCTGTTCTGAGACCTCTGAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130372.3 |
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| CDS-3UTR CCA 90 bp | TCAGGATCTCAGAGGTCTCAGAACAGGGGCACTGGGATGAACAAGGCAGCTGGAAGCTGCCCAGGGTTCTaGAGAAGAGGTAGCAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: SGSQRSQNRGTGMNKAAGSCPGF*RRGSSF Trigger: GAAGCTGCTACCTCTTCTCCAGAACCCTGGGCAGCT...TCCAGCTGCCTTGTTCATCCCAGTGCCCCTGTTCTGAGACCTCTGAGATCCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130372.3 |
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| CDS-3UTR CCA 90 bp | CTCAGGATCTCAGAGGTCTCAGAACAGGGGCACTGGGATGAACAAGGCAGCTGGCGTCCCCTTCATTATTaGGCTCCCCTTCTTTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: LRISEVSEQGHWDEQGSWRPLHY*APLLSR Trigger: TCTGGAAAGAAGGGGAGCCCAATAATGAAGGGGACG...CCAGCTGCCTTGTTCATCCCAGTGCCCCTGTTCTGAGACCTCTGAGATCCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000130372.3 |
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| CDS-3UTR GCA 90 bp | TGCAGGGTAGGGTGCCTCAGGGACTCTCTCAGGATCTCAGAGGTCTCAGAACAGCAGTATTTGAGGAATTaGTGCTCTGAAACACTGTTG | + |
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Preference number: 4 (lower is better) Translates to: CRVGCLRDSLRISEVSEQQYLRN*CSETLL Trigger: CAACAGTGTTTCAGAGCAGCAATTCCTCAAATACTG...CTGTTCTGAGACCTCTGAGATCCTGAGAGAGTCCCTGAGGCACCCTACCCTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130372.3 |
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| CDS-3UTR GCA 90 bp | TGCAGGGTAGGGTGCCTCAGGGACTCTCTCAGGATCTCAGAGGTCTCAGAACAGTATTTGAGGAATTGCTaGTCTGAAACACTGTTGACA | + |
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Preference number: 4 (lower is better) Translates to: CRVGCLRDSLRISEVSEQYLRNC*SETLLT Trigger: TGTCAACAGTGTTTCAGAGCAGCAATTCCTCAAATA...CTGTTCTGAGACCTCTGAGATCCTGAGAGAGTCCCTGAGGCACCCTACCCTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130372.3 |
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| CDS-3UTR CAA 90 bp | TGGGATGAACAAGGCAGCTGGAACGGGAGCAGAGTGCCCCCAAGTTGCCTGTGTTCGTCCCCTTCATTATaGGGCTCCCCTTCTTTCCAG | + |
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Preference number: 5 (lower is better) Translates to: WDEQGSWNGSRVPPSCLCSSPSL*GSPSFQ Trigger: CTGGAAAGAAGGGGAGCCCAATAATGAAGGGGACGA...ACACAGGCAACTTGGGGGCACTCTGCTCCCGTTCCAGCTGCCTTGTTCATCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000130372.3 |
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| CDS-3UTR CAA 90 bp | AGGGACTCTCTCAGGATCTCAGAGGTCTCAGAACAGGGGCACTGGGATGAACAACTGATGTGCCAGTATTaGAGGAATTGCTGCTCTGAA | + |
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Preference number: 5 (lower is better) Translates to: RDSLRISEVSEQGHWDEQLMCQY*RNCCSE Trigger: TTCAGAGCAGCAATTCCTCAAATACTGGCACATCAG...TTGTTCATCCCAGTGCCCCTGTTCTGAGACCTCTGAGATCCTGAGAGAGTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130372.3 |
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| CDS TCA 72 bp | AGGGACAGGGCCGGCACAGGCCAGCCAGCGAGGCGTTaGACTGAGTCAGCTGCTGCTGAATCTGCTGGATCT | + |
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Preference number: 6 (lower is better) Translates to: RDRAGTGQPARR*TESAAAESAGS Trigger: AGATCCAGCAGATTCAGCAGCAGCTGACTCAGTTCAACGCCTCGCTGGCTGGCCTGTGCCGGCCCTGTCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130372.3 |
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| CDS GCA 72 bp | CGAGATCCTCGCAGGAGGAGGCAGAGGTTTCCCAGCTaGCCAGGGTTCTGGAGAAGAGGTAGCAGCTTCCCT | + |
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Preference number: 6 (lower is better) Translates to: RDPRRRRQRFPS*PGFWRRGSSFP Trigger: AGGGAAGCTGCTACCTCTTCTCCAGAACCCTGGGCAGCTGGGAAACCTCTGCCTCCTCCTGCGAGGATCTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130372.3 |
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| CDS CCA 72 bp | AATTGCTGCTCTGAAACACTGTTGACAATCACCAGGTaGGCCCCGAGATCCTCGCAGGAGGAGGCAGAGGTT | + |
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Preference number: 6 (lower is better) Translates to: NCCSETLLTITR*APRSSQEEAEV Trigger: AACCTCTGCCTCCTCCTGCGAGGATCTCGGGGCCCACCTGGTGATTGTCAACAGTGTTTCAGAGCAGCAATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130372.3 |
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| CDS CAA 72 bp | GGGCAGGGAGCCGAGGGCTGCTCACAGACCCAGAAGTaGTTTGCAGTACAACGGCTGTCATTCCATTTATCT | + |
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Preference number: 6 (lower is better) Translates to: GQGAEGCSQTQK*FAVQRLSFHLS Trigger: AGATAAATGGAATGACAGCCGTTGTACTGCAAACAACTTCTGGGTCTGTGAGCAGCCCTCGGCTCCCTGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130372.3 |
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| CDS GCA 72 bp | GGGAGCCGAGGGCTGCTCACAGACCCAGAAGTTGTTTaGAGTACAACGGCTGTCATTCCATTTATCTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: GSRGLLTDPEVV*STTAVIPFIFC Trigger: GCAGAAGATAAATGGAATGACAGCCGTTGTACTGCAAACAACTTCTGGGTCTGTGAGCAGCCCTCGGCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130372.3 |
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| CDS CAA 90 bp | TTTCTGATGTGCCAGTATTTGAGGAATTGCTGCTCTGAAACACTGTaGACAATCACCAGGTGGGCCCCGAGATCCTCGCAGGAGGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: FLMCQYLRNCCSETL*TITRWAPRSSQEEA Trigger: TGCCTCCTCCTGCGAGGATCTCGGGGCCCACCTGGTGATTGTCAACAGTGTTTCAGAGCAGCAATTCCTCAAATACTGGCACATCAGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130372.3 |
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| CDS CAA 90 bp | AACCAGGGCAGGGAGCCGAGGGCTGCTCACAGACCCAGAAGTTGTTaGCAGTACAACGGCTGTCATTCCATTTATCTTCTGCCATTACCA | + |
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Preference number: 6 (lower is better) Translates to: NQGREPRAAHRPRSC*QYNGCHSIYLLPLP Trigger: TGGTAATGGCAGAAGATAAATGGAATGACAGCCGTTGTACTGCAAACAACTTCTGGGTCTGTGAGCAGCCCTCGGCTCCCTGCCCTGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130372.3 |
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| CDS CAA 72 bp | TCTGCCATTACCACGCAGTCCTCGTCCCCTTCATTATaGGGCTCCCCTTCTTTCCAGAAGCTGAGTTTGAGT | + |
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Preference number: 6 (lower is better) Translates to: SAITTQSSSPSL*GSPSFQKLSLS Trigger: ACTCAAACTCAGCTTCTGGAAAGAAGGGGAGCCCAATAATGAAGGGGACGAGGACTGCGTGGTAATGGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130372.3 |
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| CDS CAA 72 bp | AGGGAGCCGAGGGCTGCTCACAGACCCAGAAGTTGTTaGCAGTACAACGGCTGTCATTCCATTTATCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: REPRAAHRPRSC*QYNGCHSIYLL Trigger: CAGAAGATAAATGGAATGACAGCCGTTGTACTGCAAACAACTTCTGGGTCTGTGAGCAGCCCTCGGCTCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130372.3 |
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| CDS TCA 72 bp | CTTTCTGATGTGCCAGTATTTGAGGAATTGCTGCTCTaGAACACTGTTGACAATCACCAGGTGGGCCCCGAG | + |
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Preference number: 6 (lower is better) Translates to: LSDVPVFEELLL*NTVDNHQVGPE Trigger: CTCGGGGCCCACCTGGTGATTGTCAACAGTGTTTCAGAGCAGCAATTCCTCAAATACTGGCACATCAGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130372.3 |
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| CDS GCA 72 bp | GTTTGCAGTACAACGGCTGTCATTCCATTTATCTTCTaGCATTACCACGCAGTCCTCGTCCCCTTCATTATT | + |
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Preference number: 6 (lower is better) Translates to: VCSTTAVIPFIF*HYHAVLVPFII Trigger: AATAATGAAGGGGACGAGGACTGCGTGGTAATGGCAGAAGATAAATGGAATGACAGCCGTTGTACTGCAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130372.3 |
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