Pregenerated sensors for CD209F (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051906Ensembl transcript IDs: ENSMUST00000138439.2, ENSMUST00000145007.8
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGATTTGTGGAACTGAAATCACCTACAGAGGAAGAGGGAAGCACTaGAGGGTAGGGTGCCTCAGGAACTCTCTCAGGATCTCAAAGGTC | + |
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Preference number: 1 (lower is better) Translates to: RICGTEITYRGRGKH*RVGCLRNSLRISKV Trigger: GACCTTTGAGATCCTGAGAGAGTTCCTGAGGCACCCTACCCTGCAGTGCTTCCCTCTTCCTCTGTAGGTGATTTCAGTTCCACAAATCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138439.2 ENSMUST00000145007.8 |
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| CDS-3UTR TCA 90 bp | CACCTACAGAGGAAGAGGGAAGCACTGCAGGGTAGGGTGCCTCAGGAACTCTCTCAGCCAGCGAGGCGTTaGACTGAGTCAGCTGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: HLQRKREALQGRVPQELSQPARR*TESAAA Trigger: AGCAGCAGCTGACTCAGTTCAACGCCTCGCTGGCTG...AGAGAGTTCCTGAGGCACCCTACCCTGCAGTGCTTCCCTCTTCCTCTGTAGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145007.8 |
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| CDS-3UTR GCA 90 bp | CTACAGAGGAAGAGGGAAGCACTGCAGGGTAGGGTGCCTCAGGAACTCTCTCAGTTCTCTTCTCCCTTCTaGCTTGGACCCAGCGAGGCG | + |
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Preference number: 4 (lower is better) Translates to: LQRKREALQGRVPQELSQFSSPF*LGPSEA Trigger: CGCCTCGCTGGGTCCAAGGCAGAAGGGAGAAGAGAA...CTGAGAGAGTTCCTGAGGCACCCTACCCTGCAGTGCTTCCCTCTTCCTCTGTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138439.2 |
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| CDS-3UTR TCA 90 bp | CTACAGAGGAAGAGGGAAGCACTGCAGGGTAGGGTGCCTCAGGAACTCTCTCAGGCTCTGAAACACTGTTaGCAATCACCAGGTGGGCCC | + |
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Preference number: 4 (lower is better) Translates to: LQRKREALQGRVPQELSQALKHC*QSPGGP Trigger: GGGCCCACCTGGTGATTGTCAACAGTGTTTCAGAGC...CTGAGAGAGTTCCTGAGGCACCCTACCCTGCAGTGCTTCCCTCTTCCTCTGTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138439.2 ENSMUST00000145007.8 |
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| CDS-3UTR GCA 90 bp | CTACAGAGGAAGAGGGAAGCACTGCAGGGTAGGGTGCCTCAGGAACTCTCTCAGAGACCCTCGGGGTCATaGTCAGCAAATCCCTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: LQRKREALQGRVPQELSQRPSGS*SANPCS Trigger: AGAGCAGGGATTTGCTGAGCATGACCCCGAGGGTCT...CTGAGAGAGTTCCTGAGGCACCCTACCCTGCAGTGCTTCCCTCTTCCTCTGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138439.2 ENSMUST00000145007.8 |
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| CDS-3UTR GCA 90 bp | CTACAGAGGAAGAGGGAAGCACTGCAGGGTAGGGTGCCTCAGGAACTCTCTCAGCAGAGGTTTCCCAGCTaGCCAGGGTTCTGGAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: LQRKREALQGRVPQELSQQRFPS*PGFWRR Trigger: TCTTCTCCAGAACCCTGGGCAGCTGGGAAACCTCTG...CTGAGAGAGTTCCTGAGGCACCCTACCCTGCAGTGCTTCCCTCTTCCTCTGTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138439.2 ENSMUST00000145007.8 |
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| CDS-3UTR CCA 90 bp | CACCTACAGAGGAAGAGGGAAGCACTGCAGGGTAGGGTGCCTCAGGAACTCTCTTTCTCCCTTCTGCCTTaGACCCAGCGAGGCGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: HLQRKREALQGRVPQELSFSLLP*TQRGVE Trigger: TTCAACGCCTCGCTGGGTCCAAGGCAGAAGGGAGAA...AGAGAGTTCCTGAGGCACCCTACCCTGCAGTGCTTCCCTCTTCCTCTGTAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138439.2 |
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| CDS-3UTR TCA 90 bp | CACCTACAGAGGAAGAGGGAAGCACTGCAGGGTAGGGTGCCTCAGGAACTCTCTCCTGCTCTCCAGATGTaGCCTCCTCCTCATGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: HLQRKREALQGRVPQELSPALQM*PPPHDS Trigger: AGAATCATGAGGAGGAGGTCACATCTGGAGAGCAGG...AGAGAGTTCCTGAGGCACCCTACCCTGCAGTGCTTCCCTCTTCCTCTGTAGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138439.2 ENSMUST00000145007.8 |
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| CDS-3UTR GCA 90 bp | CAGAGGAAGAGGGAAGCACTGCAGGGTAGGGTGCCTCAGGAACTCTCTCAGGATTGCTCAGCAAATCCCTaGTCTCCAGATGTGACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QRKREALQGRVPQELSQDCSANP*SPDVTS Trigger: GGAGGTCACATCTGGAGAGCAGGGATTTGCTGAGCA...ATCCTGAGAGAGTTCCTGAGGCACCCTACCCTGCAGTGCTTCCCTCTTCCTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138439.2 ENSMUST00000145007.8 |
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| CDS-3UTR TCA 90 bp | CAGAGGAAGAGGGAAGCACTGCAGGGTAGGGTGCCTCAGGAACTCTCTCAGGATCATTCCAATCATCCATaGACAGCTCCACGCAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: QRKREALQGRVPQELSQDHSNHP*TAPRSP Trigger: AGGACTGCGTGGAGCTGTTCATGGATGATTGGAATG...ATCCTGAGAGAGTTCCTGAGGCACCCTACCCTGCAGTGCTTCCCTCTTCCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138439.2 ENSMUST00000145007.8 |
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| CDS-3UTR TCA 90 bp | AGCTCAGGATTTGTGGAACTGAAATCACCTACAGAGGAAGAGGGAAGCACTGCAGACCCAGCGAGGCGTTaGACTGAGTCAGCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSGFVELKSPTEEEGSTADPARR*TESAAA Trigger: AGCAGCAGCTGACTCAGTTCAACGCCTCGCTGGGTC...TGCAGTGCTTCCCTCTTCCTCTGTAGGTGATTTCAGTTCCACAAATCCTGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138439.2 |
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| CDS-3UTR CCA 90 bp | CACCTACAGAGGAAGAGGGAAGCACTGCAGGGTAGGGTGCCTCAGGAACTCTCTGAACCTTCATGTATATaGTCACTGAGGCCGATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HLQRKREALQGRVPQELSEPSCI*SLRPIQ Trigger: CTGGATCGGCCTCAGTGACCATATACATGAAGGTTC...AGAGAGTTCCTGAGGCACCCTACCCTGCAGTGCTTCCCTCTTCCTCTGTAGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138439.2 ENSMUST00000145007.8 |
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| CDS-3UTR GCA 90 bp | CTCAGGATTTGTGGAACTGAAATCACCTACAGAGGAAGAGGGAAGCACTGCAGGAGACCCTCGGGGTCATaGTCAGCAAATCCCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LRICGTEITYRGRGKHCRRPSGS*SANPCS Trigger: AGAGCAGGGATTTGCTGAGCATGACCCCGAGGGTCT...CCTGCAGTGCTTCCCTCTTCCTCTGTAGGTGATTTCAGTTCCACAAATCCTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138439.2 ENSMUST00000145007.8 |
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| CDS-3UTR TCA 90 bp | CTCAGGATTTGTGGAACTGAAATCACCTACAGAGGAAGAGGGAAGCACTGCAGGCCTGCTCTCCAGATGTaGCCTCCTCCTCATGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: LRICGTEITYRGRGKHCRPALQM*PPPHDS Trigger: AGAATCATGAGGAGGAGGTCACATCTGGAGAGCAGG...CCTGCAGTGCTTCCCTCTTCCTCTGTAGGTGATTTCAGTTCCACAAATCCTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138439.2 ENSMUST00000145007.8 |
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| CDS-3UTR TCA 90 bp | AGCTCAGGATTTGTGGAACTGAAATCACCTACAGAGGAAGAGGGAAGCACTGCAGCTCTGAAACACTGTTaGCAATCACCAGGTGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SSGFVELKSPTEEEGSTAALKHC*QSPGGP Trigger: GGGCCCACCTGGTGATTGTCAACAGTGTTTCAGAGC...TGCAGTGCTTCCCTCTTCCTCTGTAGGTGATTTCAGTTCCACAAATCCTGAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138439.2 ENSMUST00000145007.8 |
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| CDS-3UTR GCA 90 bp | CCTGAGCTCAGGATTTGTGGAACTGAAATCACCTACAGAGGAAGAGGGAAGCACTGCTCAGCAAATCCCTaGTCTCCAGATGTGACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PELRICGTEITYRGRGKHCSANP*SPDVTS Trigger: GGAGGTCACATCTGGAGAGCAGGGATTTGCTGAGCA...GTGCTTCCCTCTTCCTCTGTAGGTGATTTCAGTTCCACAAATCCTGAGCTCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138439.2 ENSMUST00000145007.8 |
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| CDS-3UTR GCA 90 bp | AGCTCAGGATTTGTGGAACTGAAATCACCTACAGAGGAAGAGGGAAGCACTGCACAGGGAGCAGAGGGCTaGTCACAGACCCAAAAGTTC | + |
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Preference number: 4 (lower is better) Translates to: SSGFVELKSPTEEEGSTAQGAEG*SQTQKF Trigger: GAACTTTTGGGTCTGTGAGCAGCCCTCTGCTCCCTG...TGCAGTGCTTCCCTCTTCCTCTGTAGGTGATTTCAGTTCCACAAATCCTGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138439.2 ENSMUST00000145007.8 |
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| CDS-3UTR GCA 90 bp | CTCAGGATTTGTGGAACTGAAATCACCTACAGAGGAAGAGGGAAGCACTGCAGGGGGACTTGGGTCAGATaGCCTTGTAAACTCTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: LRICGTEITYRGRGKHCRGTWVR*PCKLLE Trigger: CTCCAAGAGTTTACAAGGGCATCTGACCCAAGTCCC...CCTGCAGTGCTTCCCTCTTCCTCTGTAGGTGATTTCAGTTCCACAAATCCTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000138439.2 ENSMUST00000145007.8 |
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| CDS-3UTR CCA 90 bp | CCTGAGCTCAGGATTTGTGGAACTGAAATCACCTACAGAGGAAGAGGGAAGCACAGAAGCCAGGGGACTTaGGTCAGATGCCCTTGTAAA | + |
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Preference number: 4 (lower is better) Translates to: PELRICGTEITYRGRGKHRSQGT*VRCPCK Trigger: TTTACAAGGGCATCTGACCCAAGTCCCCTGGCTTCT...GTGCTTCCCTCTTCCTCTGTAGGTGATTTCAGTTCCACAAATCCTGAGCTCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138439.2 ENSMUST00000145007.8 |
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| CDS-3UTR TCA 90 bp | CCTGAGCTCAGGATTTGTGGAACTGAAATCACCTACAGAGGAAGAGGGAAGCACCTCCTCATGATTCTTTaGCTGATGGAACTCTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PELRICGTEITYRGRGKHLLMIL*LMELWL Trigger: GAGCCAGAGTTCCATCAGTCAAAGAATCATGAGGAG...GTGCTTCCCTCTTCCTCTGTAGGTGATTTCAGTTCCACAAATCCTGAGCTCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138439.2 ENSMUST00000145007.8 |
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| CDS-3UTR TCA 90 bp | AGCTCAGGATTTGTGGAACTGAAATCACCTACAGAGGAAGAGGGAAGCACTGCACATTCCAATCATCCATaGACAGCTCCACGCAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSGFVELKSPTEEEGSTAHSNHP*TAPRSP Trigger: AGGACTGCGTGGAGCTGTTCATGGATGATTGGAATG...TGCAGTGCTTCCCTCTTCCTCTGTAGGTGATTTCAGTTCCACAAATCCTGAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138439.2 ENSMUST00000145007.8 |
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| CDS-3UTR GCA 90 bp | TTTTATTTGGGTGCTGAGAATGGAATCAGAGAGTCACCCATGCTAGGCAAACTCCAGAGGTTTCCCAGCTaGCCAGGGTTCTGGAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: FYLGAENGIRESPMLGKLQRFPS*PGFWRR Trigger: TCTTCTCCAGAACCCTGGGCAGCTGGGAAACCTCTG...GAGTTTGCCTAGCATGGGTGACTCTCTGATTCCATTCTCAGCACCCAAATAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138439.2 ENSMUST00000145007.8 |
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| CDS-3UTR CCA 90 bp | AGCTCAGGATTTGTGGAACTGAAATCACCTACAGAGGAAGAGGGAAGCACTGCAACTGAGTTCAGTGGCTaGCTTCTCTTCTCCCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: SSGFVELKSPTEEEGSTATEFSG*LLFSLL Trigger: CAGAAGGGAGAAGAGAAGCCAGCCACTGAACTCAGT...TGCAGTGCTTCCCTCTTCCTCTGTAGGTGATTTCAGTTCCACAAATCCTGAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138439.2 |
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| CDS-3UTR TCA 90 bp | AGCTCAGGATTTGTGGAACTGAAATCACCTACAGAGGAAGAGGGAAGCACTGCACTCCTCATGATTCTTTaGCTGATGGAACTCTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: SSGFVELKSPTEEEGSTALLMIL*LMELWL Trigger: GAGCCAGAGTTCCATCAGTCAAAGAATCATGAGGAG...TGCAGTGCTTCCCTCTTCCTCTGTAGGTGATTTCAGTTCCACAAATCCTGAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138439.2 ENSMUST00000145007.8 |
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| CDS-3UTR TCA 90 bp | TTTTATTTGGGTGCTGAGAATGGAATCAGAGAGTCACCCATGCTAGGCAAACTCCGAATCCTGGAGACTTaGACCAGGGTGGCCAACATA | + |
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Preference number: 4 (lower is better) Translates to: FYLGAENGIRESPMLGKLRILET*TRVANI Trigger: TATGTTGGCCACCCTGGTTCAAGTCTCCAGGATTCG...GAGTTTGCCTAGCATGGGTGACTCTCTGATTCCATTCTCAGCACCCAAATAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138439.2 ENSMUST00000145007.8 |
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| CDS-3UTR CCA 90 bp | AGCTCAGGATTTGTGGAACTGAAATCACCTACAGAGGAAGAGGGAAGCACTGCACCGATCCAGGAGCGTTaGTTTTTCCTCACATTCCAA | + |
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Preference number: 4 (lower is better) Translates to: SSGFVELKSPTEEEGSTAPIQER*FFLTFQ Trigger: TTGGAATGTGAGGAAAAACCAACGCTCCTGGATCGG...TGCAGTGCTTCCCTCTTCCTCTGTAGGTGATTTCAGTTCCACAAATCCTGAGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000138439.2 ENSMUST00000145007.8 |
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| CDS-3UTR TCA 90 bp | CTCAGGATTTGTGGAACTGAAATCACCTACAGAGGAAGAGGGAAGCACTGCAGGCATGAATCTCTGCTCTaGAACACTGTTGACAATCAC | + |
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Preference number: 4 (lower is better) Translates to: LRICGTEITYRGRGKHCRHESLL*NTVDNH Trigger: GTGATTGTCAACAGTGTTTCAGAGCAGAGATTCATG...CCTGCAGTGCTTCCCTCTTCCTCTGTAGGTGATTTCAGTTCCACAAATCCTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138439.2 ENSMUST00000145007.8 |
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| CDS-3UTR TCA 90 bp | CCTGAGCTCAGGATTTGTGGAACTGAAATCACCTACAGAGGAAGAGGGAAGCACCATGAATCTCTGCTCTaGAACACTGTTGACAATCAC | + |
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Preference number: 4 (lower is better) Translates to: PELRICGTEITYRGRGKHHESLL*NTVDNH Trigger: GTGATTGTCAACAGTGTTTCAGAGCAGAGATTCATG...GTGCTTCCCTCTTCCTCTGTAGGTGATTTCAGTTCCACAAATCCTGAGCTCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138439.2 ENSMUST00000145007.8 |
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| CDS-3UTR CCA 90 bp | TTTTATTTGGGTGCTGAGAATGGAATCAGAGAGTCACCCATGCTAGGCAAACTCAGAAGCCAGGGGACTTaGGTCAGATGCCCTTGTAAA | + |
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Preference number: 4 (lower is better) Translates to: FYLGAENGIRESPMLGKLRSQGT*VRCPCK Trigger: TTTACAAGGGCATCTGACCCAAGTCCCCTGGCTTCT...GAGTTTGCCTAGCATGGGTGACTCTCTGATTCCATTCTCAGCACCCAAATAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000138439.2 ENSMUST00000145007.8 |
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| CDS-3UTR CCA 90 bp | TTTTATTTGGGTGCTGAGAATGGAATCAGAGAGTCACCCATGCTAGGCAAACTCGAACCTTCATGTATATaGTCACTGAGGCCGATCCAG | + |
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Preference number: 4 (lower is better) Translates to: FYLGAENGIRESPMLGKLEPSCI*SLRPIQ Trigger: CTGGATCGGCCTCAGTGACCATATACATGAAGGTTC...GAGTTTGCCTAGCATGGGTGACTCTCTGATTCCATTCTCAGCACCCAAATAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138439.2 ENSMUST00000145007.8 |
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| CDS-3UTR TCA 90 bp | AGCTCAGGATTTGTGGAACTGAAATCACCTACAGAGGAAGAGGGAAGCACTGCACATTCCAATATTTCATaGATCTCTGCTCTGAAACAC | + |
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Preference number: 4 (lower is better) Translates to: SSGFVELKSPTEEEGSTAHSNIS*ISALKH Trigger: GTGTTTCAGAGCAGAGATTCATGAAATATTGGAATG...TGCAGTGCTTCCCTCTTCCTCTGTAGGTGATTTCAGTTCCACAAATCCTGAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138439.2 ENSMUST00000145007.8 |
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| CDS-3UTR GCA 90 bp | CTCAGGATTTGTGGAACTGAAATCACCTACAGAGGAAGAGGGAAGCACTGCAGGTATTTCATGAATCTCTaGTCTGAAACACTGTTGACA | + |
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Preference number: 4 (lower is better) Translates to: LRICGTEITYRGRGKHCRYFMNL*SETLLT Trigger: TGTCAACAGTGTTTCAGAGCAGAGATTCATGAAATA...CCTGCAGTGCTTCCCTCTTCCTCTGTAGGTGATTTCAGTTCCACAAATCCTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138439.2 ENSMUST00000145007.8 |
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| CDS-3UTR GCA 90 bp | AGCTCAGGATTTGTGGAACTGAAATCACCTACAGAGGAAGAGGGAAGCACTGCATATTTCATGAATCTCTaGTCTGAAACACTGTTGACA | + |
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Preference number: 4 (lower is better) Translates to: SSGFVELKSPTEEEGSTAYFMNL*SETLLT Trigger: TGTCAACAGTGTTTCAGAGCAGAGATTCATGAAATA...TGCAGTGCTTCCCTCTTCCTCTGTAGGTGATTTCAGTTCCACAAATCCTGAGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138439.2 ENSMUST00000145007.8 |
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| CDS-3UTR TCA 90 bp | TTTTATTTGGGTGCTGAGAATGGAATCAGAGAGTCACCCATGCTAGGCAAACTCCATTCCAATATTTCATaGATCTCTGCTCTGAAACAC | + |
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Preference number: 4 (lower is better) Translates to: FYLGAENGIRESPMLGKLHSNIS*ISALKH Trigger: GTGTTTCAGAGCAGAGATTCATGAAATATTGGAATG...GAGTTTGCCTAGCATGGGTGACTCTCTGATTCCATTCTCAGCACCCAAATAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138439.2 ENSMUST00000145007.8 |
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| CDS TCA 90 bp | CCCAGTCCCAGGGACAGGGCCGGCACAGGCCAGCCAGCGAGGCGTTaGACTGAGTCAGCTGCTGCTGAATCTGCTGGATCTGCTCCAAGC | + |
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Preference number: 5 (lower is better) Translates to: PSPRDRAGTGQPARR*TESAAAESAGSAPS Trigger: GCTTGGAGCAGATCCAGCAGATTCAGCAGCAGCTGACTCAGTTCAACGCCTCGCTGGCTGGCCTGTGCCGGCCCTGTCCCTGGGACTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145007.8 |
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| CDS TCA 90 bp | AGTCCCAGGGACAGGGCCGGCACAGGCCAGCTACGGAGCAGACACTaGGTTCAGTGGCTGGCTTCTCTTCTCCCTTCTGCCTTGGACCCA | + |
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Preference number: 5 (lower is better) Translates to: SPRDRAGTGQLRSRH*VQWLASLLPSALDP Trigger: TGGGTCCAAGGCAGAAGGGAGAAGAGAAGCCAGCCACTGAACTCAGTGTCTGCTCCGTAGCTGGCCTGTGCCGGCCCTGTCCCTGGGACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138439.2 |
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| CDS CCA 90 bp | AGCCGGAGTGTGTCTGCTCCCGAGGAACGGCAACCTTGTCCAAGCTaGAGCTACCCTGCTGATCCTGGGTCTGTCCCTGTGAGTATGCAC | + |
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Preference number: 5 (lower is better) Translates to: SRSVSAPEERQPCPS*SYPADPGSVPVSMH Trigger: GTGCATACTCACAGGGACAGACCCAGGATCAGCAGGGTAGCTCCAGCTTGGACAAGGTTGCCGTTCCTCGGGAGCAGACACACTCCGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138439.2 ENSMUST00000145007.8 |
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| CDS TCA 90 bp | TGGCTGGCTTCTCTTCTCCCTTCTGCCTTGGACCCAGCGAGGCGTTaGACTGAGTCAGCTGCTGCTGAATCTGCTGGATCTGCTCCAAGC | + |
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Preference number: 5 (lower is better) Translates to: WLASLLPSALDPARR*TESAAAESAGSAPS Trigger: GCTTGGAGCAGATCCAGCAGATTCAGCAGCAGCTGACTCAGTTCAACGCCTCGCTGGGTCCAAGGCAGAAGGGAGAAGAGAAGCCAGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138439.2 |
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| CDS GCA 90 bp | CCCTCTTTCCAAAAGCTGAACTTGAGGGCGCTGCCGTCCACCCACTaGCAGGAACCTTCATGTATATGGTCACTGAGGCCGATCCAGGAG | + |
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Preference number: 5 (lower is better) Translates to: PSFQKLNLRALPSTH*QEPSCIWSLRPIQE Trigger: CTCCTGGATCGGCCTCAGTGACCATATACATGAAGGTTCCTGGCAGTGGGTGGACGGCAGCGCCCTCAAGTTCAGCTTTTGGAAAGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138439.2 ENSMUST00000145007.8 |
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| CDS CCA 90 bp | GCAGACACTGAGTTCAGTGGCTGGCTTCTCTTCTCCCTTCTGCCTTaGACCCAGCGAGGCGTTGAACTGAGTCAGCTGCTGCTGAATCTG | + |
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Preference number: 5 (lower is better) Translates to: ADTEFSGWLLFSLLP*TQRGVELSQLLLNL Trigger: CAGATTCAGCAGCAGCTGACTCAGTTCAACGCCTCGCTGGGTCCAAGGCAGAAGGGAGAAGAGAAGCCAGCCACTGAACTCAGTGTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138439.2 |
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| CDS CCA 90 bp | TTGAGGGCGCTGCCGTCCACCCACTGCCAGGAACCTTCATGTATATaGTCACTGAGGCCGATCCAGGAGCGTTGGTTTTTCCTCACATTC | + |
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Preference number: 5 (lower is better) Translates to: LRALPSTHCQEPSCI*SLRPIQERWFFLTF Trigger: GAATGTGAGGAAAAACCAACGCTCCTGGATCGGCCTCAGTGACCATATACATGAAGGTTCCTGGCAGTGGGTGGACGGCAGCGCCCTCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000138439.2 ENSMUST00000145007.8 |
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| CDS-3UTR CAA 90 bp | CACCTACAGAGGAAGAGGGAAGCACTGCAGGGTAGGGTGCCTCAGGAACTCTCTTGCTCTGAAACACTGTaGACAATCACCAGGTGGGCC | + |
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Preference number: 5 (lower is better) Translates to: HLQRKREALQGRVPQELSCSETL*TITRWA Trigger: GGCCCACCTGGTGATTGTCAACAGTGTTTCAGAGCA...AGAGAGTTCCTGAGGCACCCTACCCTGCAGTGCTTCCCTCTTCCTCTGTAGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138439.2 ENSMUST00000145007.8 |
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| CDS TCA 90 bp | AGGGGACTTGGGTCAGATGCCCTTGTAAACTCTTGGAGCTGCAAATaGGACCCTCGGGGTCATGCTCAGCAAATCCCTGCTCTCCAGATG | + |
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Preference number: 5 (lower is better) Translates to: RGLGSDALVNSWSCK*DPRGHAQQIPALQM Trigger: CATCTGGAGAGCAGGGATTTGCTGAGCATGACCCCGAGGGTCTCATTTGCAGCTCCAAGAGTTTACAAGGGCATCTGACCCAAGTCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000138439.2 ENSMUST00000145007.8 |
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| CDS-3UTR CAA 90 bp | CAGAGGAAGAGGGAAGCACTGCAGGGTAGGGTGCCTCAGGAACTCTCTCAGGATTGCCCTTGTAAACTCTaGGAGCTGCAAATGAGACCC | + |
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Preference number: 5 (lower is better) Translates to: QRKREALQGRVPQELSQDCPCKL*ELQMRP Trigger: GGGTCTCATTTGCAGCTCCAAGAGTTTACAAGGGCA...ATCCTGAGAGAGTTCCTGAGGCACCCTACCCTGCAGTGCTTCCCTCTTCCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138439.2 ENSMUST00000145007.8 |
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| CDS-3UTR CAA 90 bp | CTACAGAGGAAGAGGGAAGCACTGCAGGGTAGGGTGCCTCAGGAACTCTCTCAGTGCCCTTGTAAACTCTaGGAGCTGCAAATGAGACCC | + |
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Preference number: 5 (lower is better) Translates to: LQRKREALQGRVPQELSQCPCKL*ELQMRP Trigger: GGGTCTCATTTGCAGCTCCAAGAGTTTACAAGGGCA...CTGAGAGAGTTCCTGAGGCACCCTACCCTGCAGTGCTTCCCTCTTCCTCTGTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138439.2 ENSMUST00000145007.8 |
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| CDS-3UTR CAA 90 bp | CAGAGGAAGAGGGAAGCACTGCAGGGTAGGGTGCCTCAGGAACTCTCTCAGGATCCTCCTCATGATTCTTaGACTGATGGAACTCTGGCT | + |
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Preference number: 5 (lower is better) Translates to: QRKREALQGRVPQELSQDPPHDS*TDGTLA Trigger: AGCCAGAGTTCCATCAGTCAAAGAATCATGAGGAGG...ATCCTGAGAGAGTTCCTGAGGCACCCTACCCTGCAGTGCTTCCCTCTTCCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138439.2 ENSMUST00000145007.8 |
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| CDS-3UTR CAA 90 bp | CCTGAGCTCAGGATTTGTGGAACTGAAATCACCTACAGAGGAAGAGGGAAGCACCCTCCTCATGATTCTTaGACTGATGGAACTCTGGCT | + |
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Preference number: 5 (lower is better) Translates to: PELRICGTEITYRGRGKHPPHDS*TDGTLA Trigger: AGCCAGAGTTCCATCAGTCAAAGAATCATGAGGAGG...GTGCTTCCCTCTTCCTCTGTAGGTGATTTCAGTTCCACAAATCCTGAGCTCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138439.2 ENSMUST00000145007.8 |
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| CDS GCA 90 bp | CAGGAGCGTTGGTTTTTCCTCACATTCCAATATTTCATGAATCTCTaGTCTGAAACACTGTTGACAATCACCAGGTGGGCCCCGAGATCC | + |
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Preference number: 5 (lower is better) Translates to: QERWFFLTFQYFMNL*SETLLTITRWAPRS Trigger: GGATCTCGGGGCCCACCTGGTGATTGTCAACAGTGTTTCAGAGCAGAGATTCATGAAATATTGGAATGTGAGGAAAAACCAACGCTCCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000138439.2 ENSMUST00000145007.8 |
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| CDS CCA 90 bp | CAGGAACCTTCATGTATATGGTCACTGAGGCCGATCCAGGAGCGTTaGTTTTTCCTCACATTCCAATATTTCATGAATCTCTGCTCTGAA | + |
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Preference number: 5 (lower is better) Translates to: QEPSCIWSLRPIQER*FFLTFQYFMNLCSE Trigger: TTCAGAGCAGAGATTCATGAAATATTGGAATGTGAGGAAAAACCAACGCTCCTGGATCGGCCTCAGTGACCATATACATGAAGGTTCCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000138439.2 ENSMUST00000145007.8 |
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| CDS TCA 72 bp | GACAGGGCCGGCACAGGCCAGCTACGGAGCAGACACTaGGTTCAGTGGCTGGCTTCTCTTCTCCCTTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: DRAGTGQLRSRH*VQWLASLLPSA Trigger: GGCAGAAGGGAGAAGAGAAGCCAGCCACTGAACTCAGTGTCTGCTCCGTAGCTGGCCTGTGCCGGCCCTGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138439.2 |
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| CDS CAA 90 bp | AGCAGCAGAAGCCAGGGGACTTGGGTCAGATGCCCTTGTAAACTCTaGGAGCTGCAAATGAGACCCTCGGGGTCATGCTCAGCAAATCCC | + |
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Preference number: 6 (lower is better) Translates to: SSRSQGTWVRCPCKL*ELQMRPSGSCSANP Trigger: GGGATTTGCTGAGCATGACCCCGAGGGTCTCATTTGCAGCTCCAAGAGTTTACAAGGGCATCTGACCCAAGTCCCCTGGCTTCTGCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000138439.2 ENSMUST00000145007.8 |
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| CDS TCA 72 bp | TCTCTTCTCCCTTCTGCCTTGGACCCAGCGAGGCGTTaGACTGAGTCAGCTGCTGCTGAATCTGCTGGATCT | + |
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Preference number: 6 (lower is better) Translates to: SLLPSALDPARR*TESAAAESAGS Trigger: AGATCCAGCAGATTCAGCAGCAGCTGACTCAGTTCAACGCCTCGCTGGGTCCAAGGCAGAAGGGAGAAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138439.2 |
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| CDS CCA 72 bp | AATCTCTGCTCTGAAACACTGTTGACAATCACCAGGTaGGCCCCGAGATCCTCGCAGGAGGAGGCAGAGGTT | + |
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Preference number: 6 (lower is better) Translates to: NLCSETLLTITR*APRSSQEEAEV Trigger: AACCTCTGCCTCCTCCTGCGAGGATCTCGGGGCCCACCTGGTGATTGTCAACAGTGTTTCAGAGCAGAGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138439.2 ENSMUST00000145007.8 |
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| CDS CAA 72 bp | AGCCAGGGGACTTGGGTCAGATGCCCTTGTAAACTCTaGGAGCTGCAAATGAGACCCTCGGGGTCATGCTCA | + |
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Preference number: 6 (lower is better) Translates to: SQGTWVRCPCKL*ELQMRPSGSCS Trigger: TGAGCATGACCCCGAGGGTCTCATTTGCAGCTCCAAGAGTTTACAAGGGCATCTGACCCAAGTCCCCTGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000138439.2 ENSMUST00000145007.8 |
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| CDS CAA 72 bp | TCATTGTTAGGTTCCCCCTCTTTCCAAAAGCTGAACTaGAGGGCGCTGCCGTCCACCCACTGCCAGGAACCT | + |
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Preference number: 6 (lower is better) Translates to: SLLGSPSFQKLN*RALPSTHCQEP Trigger: AGGTTCCTGGCAGTGGGTGGACGGCAGCGCCCTCAAGTTCAGCTTTTGGAAAGAGGGGGAACCTAACAATGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000138439.2 ENSMUST00000145007.8 |
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| CDS TCA 72 bp | GGGTCAGATGCCCTTGTAAACTCTTGGAGCTGCAAATaGGACCCTCGGGGTCATGCTCAGCAAATCCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: GSDALVNSWSCK*DPRGHAQQIPA Trigger: AGCAGGGATTTGCTGAGCATGACCCCGAGGGTCTCATTTGCAGCTCCAAGAGTTTACAAGGGCATCTGACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138439.2 ENSMUST00000145007.8 |
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| CDS GCA 72 bp | AAACTCTTGGAGCTGCAAATGAGACCCTCGGGGTCATaGTCAGCAAATCCCTGCTCTCCAGATGTGACCTCC | + |
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Preference number: 6 (lower is better) Translates to: KLLELQMRPSGS*SANPCSPDVTS Trigger: GGAGGTCACATCTGGAGAGCAGGGATTTGCTGAGCATGACCCCGAGGGTCTCATTTGCAGCTCCAAGAGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138439.2 ENSMUST00000145007.8 |
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| CDS CAA 90 bp | TCATCTCCGTCATTGTTAGGTTCCCCCTCTTTCCAAAAGCTGAACTaGAGGGCGCTGCCGTCCACCCACTGCCAGGAACCTTCATGTATA | + |
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Preference number: 6 (lower is better) Translates to: SSPSLLGSPSFQKLN*RALPSTHCQEPSCI Trigger: TATACATGAAGGTTCCTGGCAGTGGGTGGACGGCAGCGCCCTCAAGTTCAGCTTTTGGAAAGAGGGGGAACCTAACAATGACGGAGATGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000138439.2 ENSMUST00000145007.8 |
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| CDS CAA 90 bp | TTCCAATCATCCATGAACAGCTCCACGCAGTCCTCATCTCCGTCATaGTTAGGTTCCCCCTCTTTCCAAAAGCTGAACTTGAGGGCGCTG | + |
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Preference number: 6 (lower is better) Translates to: FQSSMNSSTQSSSPS*LGSPSFQKLNLRAL Trigger: CAGCGCCCTCAAGTTCAGCTTTTGGAAAGAGGGGGAACCTAACAATGACGGAGATGAGGACTGCGTGGAGCTGTTCATGGATGATTGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000138439.2 ENSMUST00000145007.8 |
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| CDS CAA 72 bp | TCCATGAACAGCTCCACGCAGTCCTCATCTCCGTCATaGTTAGGTTCCCCCTCTTTCCAAAAGCTGAACTTG | + |
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Preference number: 6 (lower is better) Translates to: SMNSSTQSSSPS*LGSPSFQKLNL Trigger: CAAGTTCAGCTTTTGGAAAGAGGGGGAACCTAACAATGACGGAGATGAGGACTGCGTGGAGCTGTTCATGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000138439.2 ENSMUST00000145007.8 |
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| CDS TCA 72 bp | TTTCCTCACATTCCAATATTTCATGAATCTCTGCTCTaGAACACTGTTGACAATCACCAGGTGGGCCCCGAG | + |
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Preference number: 6 (lower is better) Translates to: FPHIPIFHESLL*NTVDNHQVGPE Trigger: CTCGGGGCCCACCTGGTGATTGTCAACAGTGTTTCAGAGCAGAGATTCATGAAATATTGGAATGTGAGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138439.2 ENSMUST00000145007.8 |
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| CDS GCA 72 bp | TGGTTTTTCCTCACATTCCAATATTTCATGAATCTCTaGTCTGAAACACTGTTGACAATCACCAGGTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: WFFLTFQYFMNL*SETLLTITRWA Trigger: GGCCCACCTGGTGATTGTCAACAGTGTTTCAGAGCAGAGATTCATGAAATATTGGAATGTGAGGAAAAACCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000138439.2 ENSMUST00000145007.8 |
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| CDS CCA 72 bp | TCATGTATATGGTCACTGAGGCCGATCCAGGAGCGTTaGTTTTTCCTCACATTCCAATATTTCATGAATCTC | + |
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Preference number: 6 (lower is better) Translates to: SCIWSLRPIQER*FFLTFQYFMNL Trigger: GAGATTCATGAAATATTGGAATGTGAGGAAAAACCAACGCTCCTGGATCGGCCTCAGTGACCATATACATGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000138439.2 ENSMUST00000145007.8 |
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