Pregenerated sensors for CD209D (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031495Ensembl transcript IDs: ENSMUST00000011445.8, ENSMUST00000209176.2
Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS-3UTR CCA 90 bp | AAGACAAGGAGAAGGAGCACGAACATGAGGGACATGAGTCAGGTTCATCCACTTTGGGCCCCCAGTTCCTaGCAGGCAGTGGTGGAGTTG | + |
Preference number: 4 (lower is better) Translates to: KTRRRSTNMRDMSQVHPLWAPSS*QAVVEL Trigger: CAACTCCACCACTGCCTGCCAGGAACTGGGGGCCCA...AAGTGGATGAACCTGACTCATGTCCCTCATGTTCGTGCTCCTTCTCCTTGTCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000011445.8 |
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CDS-3UTR GCA 90 bp | ATGAGTCAGGTTCATCCACTTGGCATAGTTTGGGATGCAGAGGCTGAGATGAGGAGGAAGGAAAGCAGCTaGAGGACCAAGGGGTTGCGG | + |
Preference number: 4 (lower is better) Translates to: MSQVHPLGIVWDAEAEMRRKESS*RTKGLR Trigger: CCGCAACCCCTTGGTCCTGCAGCTGCTTTCCTTCCT...CCTCATCTCAGCCTCTGCATCCCAAACTATGCCAAGTGGATGAACCTGACTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011445.8 |
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CDS-3UTR CCA 90 bp | CAAAAGACAAGGAGAAGGAGCACGAACATGAGGGACATGAGTCAGGTTCATCCATCTATGATGACCAGTTaGGCCCCCAGTTCCTGGCAG | + |
Preference number: 4 (lower is better) Translates to: QKTRRRSTNMRDMSQVHPSMMTS*APSSWQ Trigger: CTGCCAGGAACTGGGGGCCCAACTGGTCATCATAGA...TGGATGAACCTGACTCATGTCCCTCATGTTCGTGCTCCTTCTCCTTGTCTTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000011445.8 |
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CDS-3UTR CCA 90 bp | AAGGAGAAGGAGCACGAACATGAGGGACATGAGTCAGGTTCATCCACTTGGCATGAGACCCATCCAGGTTaGTCCTCTAGCCTTAGAAGT | + |
Preference number: 4 (lower is better) Translates to: KEKEHEHEGHESGSSTWHETHPG*SSSLRS Trigger: ACTTCTAAGGCTAGAGGACCAACCTGGATGGGTCTC...ATGCCAAGTGGATGAACCTGACTCATGTCCCTCATGTTCGTGCTCCTTCTCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011445.8 |
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CDS-3UTR GCA 90 bp | GTCCTAAAGTCAAAAGACAAGGAGAAGGAGCACGAACATGAGGGACATGAGTCAGAGCCATCCACCCAGTaGCATGTGGCTTCATTATGC | + |
Preference number: 4 (lower is better) Translates to: VLKSKDKEKEHEHEGHESEPSTQ*HVASLC Trigger: GCATAATGAAGCCACATGGCACTGGGTGGATGGCTC...TGACTCATGTCCCTCATGTTCGTGCTCCTTCTCCTTGTCTTTTGACTTTAGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011445.8 |
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CDS-3UTR TCA 90 bp | AAGGAGAAGGAGCACGAACATGAGGGACATGAGTCAGGTTCATCCACTTGGCATGTAGTTTATCACAACTaGGATCATTCCAGCCATCCC | + |
Preference number: 4 (lower is better) Translates to: KEKEHEHEGHESGSSTWHVVYHN*DHSSHP Trigger: GGGATGGCTGGAATGATCTCAGTTGTGATAAACTAC...ATGCCAAGTGGATGAACCTGACTCATGTCCCTCATGTTCGTGCTCCTTCTCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011445.8 |
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CDS-3UTR CCA 90 bp | AGTCAAAAGACAAGGAGAAGGAGCACGAACATGAGGGACATGAGTCAGGTTCATCCTGGCAGGCAGTGGTaGAGTTGTGCCAATTTCTTT | + |
Preference number: 4 (lower is better) Translates to: SQKTRRRSTNMRDMSQVHPGRQW*SCANFF Trigger: AAAGAAATTGGCACAACTCCACCACTGCCTGCCAGG...ATGAACCTGACTCATGTCCCTCATGTTCGTGCTCCTTCTCCTTGTCTTTTGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011445.8 |
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CDS-3UTR CCA 90 bp | AAGTCAAAAGACAAGGAGAAGGAGCACGAACATGAGGGACATGAGTCAGGTTCACCACCCAGTGCCATGTaGCTTCATTATGCATGTCTG | + |
Preference number: 4 (lower is better) Translates to: KSKDKEKEHEHEGHESGSPPSAM*LHYACL Trigger: CAGACATGCATAATGAAGCCACATGGCACTGGGTGG...TGAACCTGACTCATGTCCCTCATGTTCGTGCTCCTTCTCCTTGTCTTTTGACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011445.8 |
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CDS-3UTR TCA 90 bp | AAGACAAGGAGAAGGAGCACGAACATGAGGGACATGAGTCAGGTTCATCCACTTCACTTGCTGTGTCTTTaGTTCCATGGAGTCACTCAT | + |
Preference number: 4 (lower is better) Translates to: KTRRRSTNMRDMSQVHPLHLLCL*FHGVTH Trigger: ATGAGTGACTCCATGGAATCAAAGACACAGCAAGTG...AAGTGGATGAACCTGACTCATGTCCCTCATGTTCGTGCTCCTTCTCCTTGTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011445.8 |
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CDS-3UTR GCA 90 bp | CTAAAGTCAAAAGACAAGGAGAAGGAGCACGAACATGAGGGACATGAGTCAGGTGCAGTGGTGGAGTTGTaGCAATTTCTTTGGGACTTG | + |
Preference number: 4 (lower is better) Translates to: LKSKDKEKEHEHEGHESGAVVEL*QFLWDL Trigger: CAAGTCCCAAAGAAATTGGCACAACTCCACCACTGC...ACCTGACTCATGTCCCTCATGTTCGTGCTCCTTCTCCTTGTCTTTTGACTTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011445.8 |
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CDS-3UTR TCA 90 bp | AGTCAAAAGACAAGGAGAAGGAGCACGAACATGAGGGACATGAGTCAGGTTCATTTTGTAATCGGGAGCTaGTATCAGAATACCTGGTGC | + |
Preference number: 4 (lower is better) Translates to: SQKTRRRSTNMRDMSQVHFVIGS*YQNTWC Trigger: GCACCAGGTATTCTGATATCAGCTCCCGATTACAAA...ATGAACCTGACTCATGTCCCTCATGTTCGTGCTCCTTCTCCTTGTCTTTTGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011445.8 |
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CDS-3UTR GCA 90 bp | AAGTCAAAAGACAAGGAGAAGGAGCACGAACATGAGGGACATGAGTCAGGTTCACATGTGGCTTCATTATaGATGTCTGAGAGACCCATC | + |
Preference number: 4 (lower is better) Translates to: KSKDKEKEHEHEGHESGSHVASL*MSERPI Trigger: GATGGGTCTCTCAGACATGCATAATGAAGCCACATG...TGAACCTGACTCATGTCCCTCATGTTCGTGCTCCTTCTCCTTGTCTTTTGACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011445.8 |
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CDS-3UTR CCA 90 bp | GTCCTAAAGTCAAAAGACAAGGAGAAGGAGCACGAACATGAGGGACATGAGTCAACACTCTTCATCCTCTaGAATGACCACTTGCTGTGT | + |
Preference number: 4 (lower is better) Translates to: VLKSKDKEKEHEHEGHESTLFIL*NDHLLC Trigger: ACACAGCAAGTGGTCATTCCAGAGGATGAAGAGTGT...TGACTCATGTCCCTCATGTTCGTGCTCCTTCTCCTTGTCTTTTGACTTTAGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011445.8 |
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CDS-3UTR CCA 90 bp | AAGGAGAAGGAGCACGAACATGAGGGACATGAGTCAGGTTCATCCACTTGGCATAATTTCTTTGGGACTTaGAGAAGAAGTAACAGCTTC | + |
Preference number: 4 (lower is better) Translates to: KEKEHEHEGHESGSSTWHNFFGT*RRSNSF Trigger: GAAGCTGTTACTTCTTCTCCAAGTCCCAAAGAAATT...ATGCCAAGTGGATGAACCTGACTCATGTCCCTCATGTTCGTGCTCCTTCTCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011445.8 |
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CDS-3UTR GCA 90 bp | AGTCAAAAGACAAGGAGAAGGAGCACGAACATGAGGGACATGAGTCAGGTTCATCTGCTTCGTATACTCTaGCAAACTCTTGATTCCAAA | + |
Preference number: 4 (lower is better) Translates to: SQKTRRRSTNMRDMSQVHLLRIL*QTLDSK Trigger: TTTGGAATCAAGAGTTTGGCAGAGTATACGAAGCAG...ATGAACCTGACTCATGTCCCTCATGTTCGTGCTCCTTCTCCTTGTCTTTTGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011445.8 |
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CDS CCA 90 bp | TGCTCCTCATCAGTCTCTATGATGACCAGTTGGGCCCCCAGTTCCTaGCAGGCAGTGGTGGAGTTGTGCCAATTTCTTTGGGACTTGGAG | + |
Preference number: 5 (lower is better) Translates to: CSSSVSMMTSWAPSS*QAVVELCQFLWDLE Trigger: CTCCAAGTCCCAAAGAAATTGGCACAACTCCACCACTGCCTGCCAGGAACTGGGGGCCCAACTGGTCATCATAGAGACTGATGAGGAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000011445.8 ENSMUST00000209176.2 |
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CDS GCA 90 bp | ATCCAGGTTGGTCCTCTAGCCTTAGAAGTCTGCTGCAGGAAAGTCTaGTCCTCATCAGTCTCTATGATGACCAGTTGGGCCCCCAGTTCC | + |
Preference number: 5 (lower is better) Translates to: IQVGPLALEVCCRKV*SSSVSMMTSWAPSS Trigger: GGAACTGGGGGCCCAACTGGTCATCATAGAGACTGATGAGGAGCAGACTTTCCTGCAGCAGACTTCTAAGGCTAGAGGACCAACCTGGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000011445.8 ENSMUST00000209176.2 |
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CDS TCA 90 bp | CGCAGGGTTGGCACAAGCCATCATGAACTTCAGCCTTCAGTTGCATaGGCTCCTGGTAGATTTTGTTCTGAACCTCTGAGCTGGGGACCT | + |
Preference number: 5 (lower is better) Translates to: RRVGTSHHELQPSVA*APGRFCSEPLSWGP Trigger: AGGTCCCCAGCTCAGAGGTTCAGAACAAAATCTACCAGGAGCTCATGCAACTGAAGGCTGAAGTTCATGATGGCTTGTGCCAACCCTGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011445.8 ENSMUST00000209176.2 |
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CDS-3UTR CAA 90 bp | GTCCTAAAGTCAAAAGACAAGGAGAAGGAGCACGAACATGAGGGACATGAGTCAGTCCCTGGCGCAGGGTaGGCACAAGCCATCATGAAC | + |
Preference number: 5 (lower is better) Translates to: VLKSKDKEKEHEHEGHESVPGAG*AQAIMN Trigger: GTTCATGATGGCTTGTGCCAACCCTGCGCCAGGGAC...TGACTCATGTCCCTCATGTTCGTGCTCCTTCTCCTTGTCTTTTGACTTTAGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011445.8 |
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CDS GCA 90 bp | TCTGAGAGACCCATCCAGGTTGGTCCTCTAGCCTTAGAAGTCTGCTaGAGGAAAGTCTGCTCCTCATCAGTCTCTATGATGACCAGTTGG | + |
Preference number: 5 (lower is better) Translates to: SERPIQVGPLALEVC*RKVCSSSVSMMTSW Trigger: CCAACTGGTCATCATAGAGACTGATGAGGAGCAGACTTTCCTGCAGCAGACTTCTAAGGCTAGAGGACCAACCTGGATGGGTCTCTCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011445.8 ENSMUST00000209176.2 |
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CDS-3UTR CAA 90 bp | AAGGAGAAGGAGCACGAACATGAGGGACATGAGTCAGGTTCATCCACTTGGCATCAGGCAGTGGTGGAGTaGTGCCAATTTCTTTGGGAC | + |
Preference number: 5 (lower is better) Translates to: KEKEHEHEGHESGSSTWHQAVVE*CQFLWD Trigger: GTCCCAAAGAAATTGGCACAACTCCACCACTGCCTG...ATGCCAAGTGGATGAACCTGACTCATGTCCCTCATGTTCGTGCTCCTTCTCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011445.8 |
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CDS-3UTR CAA 90 bp | AGTCAAAAGACAAGGAGAAGGAGCACGAACATGAGGGACATGAGTCAGGTTCATCTCTATGATGACCAGTaGGGCCCCCAGTTCCTGGCA | + |
Preference number: 5 (lower is better) Translates to: SQKTRRRSTNMRDMSQVHLYDDQ*GPQFLA Trigger: TGCCAGGAACTGGGGGCCCAACTGGTCATCATAGAG...ATGAACCTGACTCATGTCCCTCATGTTCGTGCTCCTTCTCCTTGTCTTTTGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000011445.8 |
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CDS TCA 90 bp | TGTGCCAATTTCTTTGGGACTTGGAGAAGAAGTAACAGCTTCCATTaGAGAATGTCCAGTCCCTGGCGCAGGGTTGGCACAAGCCATCAT | + |
Preference number: 5 (lower is better) Translates to: CANFFGTWRRSNSFH*RMSSPWRRVGTSHH Trigger: ATGATGGCTTGTGCCAACCCTGCGCCAGGGACTGGACATTCTTCAATGGAAGCTGTTACTTCTTCTCCAAGTCCCAAAGAAATTGGCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011445.8 ENSMUST00000209176.2 |
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CDS GCA 90 bp | AAGAACAGGAAGGAAAGCAGCTGCAGGACCAAGGGGTTGCGGCTCTaGTTCGTATACTCTGCCAAACTCTTGATTCCAAATTTTGTTTGT | + |
Preference number: 5 (lower is better) Translates to: KNRKESSCRTKGLRL*FVYSAKLLIPNFVC Trigger: ACAAACAAAATTTGGAATCAAGAGTTTGGCAGAGTATACGAAGCAGAGCCGCAACCCCTTGGTCCTGCAGCTGCTTTCCTTCCTGTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011445.8 |
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CDS-3UTR CAA 90 bp | AGTCAAAAGACAAGGAGAAGGAGCACGAACATGAGGGACATGAGTCAGGTTCATCCACTTGCTGTGTCTTaGATTCCATGGAGTCACTCA | + |
Preference number: 5 (lower is better) Translates to: SQKTRRRSTNMRDMSQVHPLAVS*IPWSHS Trigger: TGAGTGACTCCATGGAATCAAAGACACAGCAAGTGG...ATGAACCTGACTCATGTCCCTCATGTTCGTGCTCCTTCTCCTTGTCTTTTGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011445.8 |
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CDS-3UTR CAA 90 bp | AAGACAAGGAGAAGGAGCACGAACATGAGGGACATGAGTCAGGTTCATCCACTTGTTGTGCCAATTTCTTaGGGACTTGGAGAAGAAGTA | + |
Preference number: 5 (lower is better) Translates to: KTRRRSTNMRDMSQVHPLVVPIS*GLGEEV Trigger: TACTTCTTCTCCAAGTCCCAAAGAAATTGGCACAAC...AAGTGGATGAACCTGACTCATGTCCCTCATGTTCGTGCTCCTTCTCCTTGTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011445.8 |
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CDS CAA 90 bp | CTGCTGCAGGAAAGTCTGCTCCTCATCAGTCTCTATGATGACCAGTaGGGCCCCCAGTTCCTGGCAGGCAGTGGTGGAGTTGTGCCAATT | + |
Preference number: 6 (lower is better) Translates to: LLQESLLLISLYDDQ*GPQFLAGSGGVVPI Trigger: AATTGGCACAACTCCACCACTGCCTGCCAGGAACTGGGGGCCCAACTGGTCATCATAGAGACTGATGAGGAGCAGACTTTCCTGCAGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000011445.8 ENSMUST00000209176.2 |
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CDS TCA 72 bp | CCTCTGAGCTGGGGACCTTTGACACTAGGATCAGAATaGTCAGCAGAAGCCCAGCCAAGAACAGGAAGGAAA | + |
Preference number: 6 (lower is better) Translates to: PLSWGPLTLGSE*SAEAQPRTGRK Trigger: TTTCCTTCCTGTTCTTGGCTGGGCTTCTGCTGATCATTCTGATCCTAGTGTCAAAGGTCCCCAGCTCAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011445.8 |
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CDS TCA 72 bp | ATCCACCCAGTGCCATGTGGCTTCATTATGCATGTCTaGGAGACCCATCCAGGTTGGTCCTCTAGCCTTAGA | + |
Preference number: 6 (lower is better) Translates to: IHPVPCGFIMHV*ETHPGWSSSLR Trigger: TCTAAGGCTAGAGGACCAACCTGGATGGGTCTCTCAGACATGCATAATGAAGCCACATGGCACTGGGTGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011445.8 ENSMUST00000209176.2 |
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CDS TCA 72 bp | TTCTTTGGGACTTGGAGAAGAAGTAACAGCTTCCATTaGAGAATGTCCAGTCCCTGGCGCAGGGTTGGCACA | + |
Preference number: 6 (lower is better) Translates to: FFGTWRRSNSFH*RMSSPWRRVGT Trigger: TGTGCCAACCCTGCGCCAGGGACTGGACATTCTTCAATGGAAGCTGTTACTTCTTCTCCAAGTCCCAAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011445.8 ENSMUST00000209176.2 |
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CDS TCA 72 bp | TGGTGCCACTCATCAAACACTCTTCATCCTCTGGAATaGCCACTTGCTGTGTCTTTGATTCCATGGAGTCAC | + |
Preference number: 6 (lower is better) Translates to: WCHSSNTLHPLE*PLAVSLIPWSH Trigger: GTGACTCCATGGAATCAAAGACACAGCAAGTGGTCATTCCAGAGGATGAAGAGTGTTTGATGAGTGGCACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011445.8 ENSMUST00000209176.2 |