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Pregenerated sensors for CD209C (Mus musculus)

Ensembl gene IDs: ENSMUSG00000040165

Ensembl transcript IDs: ENSMUST00000044060.14, ENSMUST00000208622.2

Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAATATTTCATGAAACTGAACAGCAGATGTGAGCCATCCACCCAGTaGCATCTGCCTTCATGCTTCAGGTCTGACAGGCCCATCCAGGCA +
Preference number: 1 (lower is better)
Translates to: QYFMKLNSRCEPSTQ*HLPSCFRSDRPIQA
Trigger: TGCCTGGATGGGCCTGTCAGACCTGAAGCATGAAGGCAGATGGCACTGGGTGGATGGCTCACATCTGCTGTTCAGTTTCATGAAATATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208622.2
3UTR-3UTR TCA 90 bp CAGGACATAGCAGACTTCTTGCAGATCCAGTATTTCTTAATTGTACATGGGGCAACTGAACAGCAGATGTaGGCCATCCACCCAGTGCCA +
Preference number: 2 (lower is better)
Translates to: QDIADFLQIQYFLIVHGATEQQM*AIHPVP
Trigger: TGGCACTGGGTGGATGGCTCACATCTGCTGTTCAGT...TGCCCCATGTACAATTAAGAAATACTGGATCTGCAAGAAGTCTGCTATGTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208622.2
3UTR-3UTR GCA 90 bp GGACATAGCAGACTTCTTGCAGATCCAGTATTTCTTAATTGTACATGGGGCATCGAGCCATCCACCCAGTaGCATCTGCCTTCATGCTTC +
Preference number: 2 (lower is better)
Translates to: GHSRLLADPVFLNCTWGIEPSTQ*HLPSCF
Trigger: GAAGCATGAAGGCAGATGGCACTGGGTGGATGGCTC...GATGCCCCATGTACAATTAAGAAATACTGGATCTGCAAGAAGTCTGCTATGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208622.2
3UTR-3UTR TCA 90 bp CAGGACATAGCAGACTTCTTGCAGATCCAGTATTTCTTAATTGTACATGGGGCATCCAGCCATCGCCTCTaGATTCAGCACAGTCTTCTT +
Preference number: 2 (lower is better)
Translates to: QDIADFLQIQYFLIVHGASSHRL*IQHSLL
Trigger: AAGAAGACTGTGCTGAATTCAGAGGCGATGGCTGGA...TGCCCCATGTACAATTAAGAAATACTGGATCTGCAAGAAGTCTGCTATGTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208622.2
3UTR-3UTR CCA 90 bp GGACATAGCAGACTTCTTGCAGATCCAGTATTTCTTAATTGTACATGGGGCATCCTTCCCATTCATTGTTaGGCTCTCCCTTGTTCCAAT +
Preference number: 2 (lower is better)
Translates to: GHSRLLADPVFLNCTWGILPIHC*ALPCSN
Trigger: ATTGGAACAAGGGAGAGCCCAACAATGAATGGGAAG...GATGCCCCATGTACAATTAAGAAATACTGGATCTGCAAGAAGTCTGCTATGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208622.2
3UTR GCA 72 bp ATGAAACTGAACAGCAGATGTGAGCCATCCACCCAGTaGCATCTGCCTTCATGCTTCAGGTCTGACAGGCCC +
Preference number: 3 (lower is better)
Translates to: MKLNSRCEPSTQ*HLPSCFRSDRP
Trigger: GGGCCTGTCAGACCTGAAGCATGAAGGCAGATGGCACTGGGTGGATGGCTCACATCTGCTGTTCAGTTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208622.2
CDS-3UTR GCA 90 bp TGTGAGCCATCCACCCAGTGCCATCTGCCTTCATGCTTCAGGTCTGACAGGCCCTACTTTCTCCTTCTTTaGCTGTTCTTGTCCGTGGGA +
Preference number: 4 (lower is better)
Translates to: CEPSTQCHLPSCFRSDRPYFLLL*LFLSVG
Trigger: TCCCACGGACAAGAACAGGCAAAGAAGGAGAAAGTA...GGGCCTGTCAGACCTGAAGCATGAAGGCAGATGGCACTGGGTGGATGGCTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208622.2
3UTR CAA 72 bp CCTCTGAATTCAGCACAGTCTTCTTCCCATTCATTGTaGGGCTCTCCCTTGTTCCAATATTTCATGAAACTG +
Preference number: 4 (lower is better)
Translates to: PLNSAQSSSHSL*GSPLFQYFMKL
Trigger: CAGTTTCATGAAATATTGGAACAAGGGAGAGCCCAACAATGAATGGGAAGAAGACTGTGCTGAATTCAGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208622.2
CDS-3UTR CAA 90 bp TGTGAGCCATCCACCCAGTGCCATCTGCCTTCATGCTTCAGGTCTGACAGGCCCTGCAGGAAGCTTTATTaGAGACTTCAGCTGGGTCAT +
Preference number: 5 (lower is better)
Translates to: CEPSTQCHLPSCFRSDRPCRKLY*RLQLGH
Trigger: ATGACCCAGCTGAAGTCTCAAATAAAGCTTCCTGCA...GGGCCTGTCAGACCTGAAGCATGAAGGCAGATGGCACTGGGTGGATGGCTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208622.2
CDS GCA 90 bp TTGAGACTTCAGCTGGGTCATCTCCTTGTATACTTTCTCCTTCTTTaGCTGTTCTTGTCCGTGGGAGTAGGCAACATTAGAGACTCTTTT +
Preference number: 5 (lower is better)
Translates to: LRLQLGHLLVYFLLL*LFLSVGVGNIRDSF
Trigger: AAAAGAGTCTCTAATGTTGCCTACTCCCACGGACAAGAACAGGCAAAGAAGGAGAAAGTATACAAGGAGATGACCCAGCTGAAGTCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044060.14
ENSMUST00000208622.2
CDS-3UTR CAA 90 bp GTGCAGGACATAGCAGACTTCTTGCAGATCCAGTATTTCTTAATTGTACATGGGATACTTTCTCCTTCTTaGCCTGTTCTTGTCCGTGGG +
Preference number: 5 (lower is better)
Translates to: VQDIADFLQIQYFLIVHGILSPS*PVLVRG
Trigger: CCCACGGACAAGAACAGGCAAAGAAGGAGAAAGTAT...CCCATGTACAATTAAGAAATACTGGATCTGCAAGAAGTCTGCTATGTCCTGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208622.2
CDS-3UTR CAA 90 bp CAGGACATAGCAGACTTCTTGCAGATCCAGTATTTCTTAATTGTACATGGGGCAAGCTGGGTCATCTCCTaGTATACTTTCTCCTTCTTT +
Preference number: 5 (lower is better)
Translates to: QDIADFLQIQYFLIVHGASWVIS*YTFSFF
Trigger: AAAGAAGGAGAAAGTATACAAGGAGATGACCCAGCT...TGCCCCATGTACAATTAAGAAATACTGGATCTGCAAGAAGTCTGCTATGTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208622.2
CDS TCA 72 bp CAGTCCCAGGGGCAAGGGCGGCACAGGCGGTTTATTTaGGACTTCAGCTGGGTCATCTCCTTGTATACTTTC +
Preference number: 6 (lower is better)
Translates to: QSQGQGRHRRFI*DFSWVISLYTF
Trigger: GAAAGTATACAAGGAGATGACCCAGCTGAAGTCTCAAATAAACCGCCTGTGCCGCCCTTGCCCCTGGGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044060.14
CDS CAA 72 bp CCAGTCCCAGGGGCAAGGGCGGCACAGGCGGTTTATTaGAGACTTCAGCTGGGTCATCTCCTTGTATACTTT +
Preference number: 6 (lower is better)
Translates to: PVPGARAAQAVY*RLQLGHLLVYF
Trigger: AAAGTATACAAGGAGATGACCCAGCTGAAGTCTCAAATAAACCGCCTGTGCCGCCCTTGCCCCTGGGACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044060.14
CDS GCA 72 bp CAGCTGGGTCATCTCCTTGTATACTTTCTCCTTCTTTaGCTGTTCTTGTCCGTGGGAGTAGGCAACATTAGA +
Preference number: 6 (lower is better)
Translates to: QLGHLLVYFLLL*LFLSVGVGNIR
Trigger: TCTAATGTTGCCTACTCCCACGGACAAGAACAGGCAAAGAAGGAGAAAGTATACAAGGAGATGACCCAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000044060.14
ENSMUST00000208622.2
CDS CAA 72 bp GAAGTCTGCTGCAGGAAGCTCTGTTCATCATCACTTTaGATAACCACTAGTTGGGCATCCAATTTTCTGCAG +
Preference number: 6 (lower is better)
Translates to: EVCCRKLCSSSL*ITTSWASNFLQ
Trigger: CTGCAGAAAATTGGATGCCCAACTAGTGGTTATCAAAAGTGATGATGAACAGAGCTTCCTGCAGCAGACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044060.14
CDS CCA 72 bp AAGCTCTGTTCATCATCACTTTTGATAACCACTAGTTaGGCATCCAATTTTCTGCAGGCATTGACAGAGTCA +
Preference number: 6 (lower is better)
Translates to: KLCSSSLLITTS*ASNFLQALTES
Trigger: TGACTCTGTCAATGCCTGCAGAAAATTGGATGCCCAACTAGTGGTTATCAAAAGTGATGATGAACAGAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044060.14