Pregenerated sensors for CD209B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000065987Ensembl transcript IDs: ENSMUST00000084086.9, ENSMUST00000111014.8, ENSMUST00000171635.8, ENSMUST00000188386.2
Found 174 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACGATCCTGAGGCCAACAGGCAGGAAGAAGGAGCTGGCACGAAAGTaGGGCACATCCATGTGCCTGGCAGAATGGCATGAAGGTAGGAGC | + |
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Preference number: 1 (lower is better) Translates to: TILRPTGRKKELARK*GTSMCLAEWHEGRS Trigger: GCTCCTACCTTCATGCCATTCTGCCAGGCACATGGATGTGCCTCACTTTCGTGCCAGCTCCTTCTTCCTGCCTGTTGGCCTCAGGATCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
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| 3UTR CCA 90 bp | GAATGGCATGAAGGTAGGAGCGGAGATGAGCTAGCCTTCAGTGCATaGGGTTGCAGACTTCTTGCAGATCCAGAACTTTTTGAGTTCACA | + |
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Preference number: 1 (lower is better) Translates to: EWHEGRSGDELAFSA*GCRLLADPELFEFT Trigger: TGTGAACTCAAAAAGTTCTGGATCTGCAAGAAGTCTGCAACCCCATGCACTGAAGGCTAGCTCATCTCCGCTCCTACCTTCATGCCATTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111014.8 |
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| 3UTR TCA 90 bp | GATGTTGTTAGGCTCCCCTCTATTCCAATATTTCTGGAATCTGGATaGCAGAGTAGAACCATCTACCCAGAGCCACGTGGCCTCCTTCTT | + |
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Preference number: 1 (lower is better) Translates to: DVVRLPSIPIFLESG*QSRTIYPEPRGLLL Trigger: AAGAAGGAGGCCACGTGGCTCTGGGTAGATGGTTCTACTCTGTCATCCAGATTCCAGAAATATTGGAATAGAGGGGAGCCTAACAACATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111014.8 |
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| 3UTR CCA 90 bp | TCTTCCTCACCGATGTTGTTAGGCTCCCCTCTATTCCAATATTTCTaGAATCTGGATGACAGAGTAGAACCATCTACCCAGAGCCACGTG | + |
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Preference number: 1 (lower is better) Translates to: SSSPMLLGSPLFQYF*NLDDRVEPSTQSHV Trigger: CACGTGGCTCTGGGTAGATGGTTCTACTCTGTCATCCAGATTCCAGAAATATTGGAATAGAGGGGAGCCTAACAACATCGGTGAGGAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111014.8 |
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| 3UTR CCA 90 bp | CTTTATTACAGCAACAGTAAACTAGACTACCTGACAATAGACAAATaGCTGGGGAGATGCTTAGTGGATAAGAGTGCTGATGTGCAAGAA | + |
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Preference number: 1 (lower is better) Translates to: LYYSNSKLDYLTIDK*LGRCLVDKSADVQE Trigger: TTCTTGCACATCAGCACTCTTATCCACTAAGCATCTCCCCAGCCATTTGTCTATTGTCAGGTAGTCTAGTTTACTGTTGCTGTAATAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
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| 3UTR-3UTR CCA 90 bp | AACAGGCAGGAAGAAGGAGCTGGCACGAAAGTGAGGCACATCCATGTGCCTGGCCTACCCAGAGCCACGTaGCCTCCTTCTTCAGGTCTG | + |
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Preference number: 2 (lower is better) Translates to: NRQEEGAGTKVRHIHVPGLPRAT*PPSSGL Trigger: CAGACCTGAAGAAGGAGGCCACGTGGCTCTGGGTAG...GCCAGGCACATGGATGTGCCTCACTTTCGTGCCAGCTCCTTCTTCCTGCCTGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111014.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGCCTTTTTCACGATCCTGAGGCCAACAGGCAGGAAGAAGGAGCTGGCACGAGCACATCCATGTGCCTaGCAGAATGGCATGAAGGTA | + |
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Preference number: 2 (lower is better) Translates to: RAFFTILRPTGRKKELARAHPCA*QNGMKV Trigger: TACCTTCATGCCATTCTGCCAGGCACATGGATGTGC...TCGTGCCAGCTCCTTCTTCCTGCCTGTTGGCCTCAGGATCGTGAAAAAGGCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
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| 3UTR-3UTR TCA 90 bp | TTAGTGGATAAGAGTGCTGATGTGCAAGAAAGAGGGCCTGACCTTGAAGCCCTAGAGCTGGCACGAAAGTaGGGCACATCCATGTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: LVDKSADVQERGPDLEALELARK*GTSMCL Trigger: CAGGCACATGGATGTGCCTCACTTTCGTGCCAGCTC...TAGGGCTTCAAGGTCAGGCCCTCTTTCTTGCACATCAGCACTCTTATCCACTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
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| 3UTR-3UTR TCA 90 bp | GTGCAAGAAAGAGGGCCTGACCTTGAAGCCCTAGTAATTGTTAGAGGCCAGACACCTTTTTCACGATCCTaGGGCCAACAGGCAGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: VQERGPDLEALVIVRGQTPFSRS*GQQAGR Trigger: TCTTCCTGCCTGTTGGCCTCAGGATCGTGAAAAAGG...TGTCTGGCCTCTAACAATTACTAGGGCTTCAAGGTCAGGCCCTCTTTCTTGCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
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| 3UTR-3UTR TCA 90 bp | CTAGACTACCTGACAATAGACAAATGGCTGGGGAGATGCTTAGTGGATAAGAGTCATTGGGTTGGCCAGTaGGCATGTCTGTGGGGGCTT | + |
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Preference number: 2 (lower is better) Translates to: LDYLTIDKWLGRCLVDKSHWVGQ*ACLWGL Trigger: AAGCCCCCACAGACATGCTCACTGGCCAACCCAATG...ACTCTTATCCACTAAGCATCTCCCCAGCCATTTGTCTATTGTCAGGTAGTCTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
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| 3UTR-3UTR TCA 90 bp | ATAGACAAATGGCTGGGGAGATGCTTAGTGGATAAGAGTGCTGATGTGCAAGAACTCCTTCTTCAGGTCTaGCAGGCCCATCCAGGTTGG | + |
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Preference number: 2 (lower is better) Translates to: IDKWLGRCLVDKSADVQELLLQV*QAHPGW Trigger: CCAACCTGGATGGGCCTGTCAGACCTGAAGAAGGAG...TTCTTGCACATCAGCACTCTTATCCACTAAGCATCTCCCCAGCCATTTGTCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111014.8 |
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| 3UTR-3UTR GCA 90 bp | GTGCAAGAAAGAGGGCCTGACCTTGAAGCCCTAGTAATTGTTAGAGGCCAGACACAATGGTGTATTGCCTaGATTGGGTTGGCCAGTGAG | + |
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Preference number: 2 (lower is better) Translates to: VQERGPDLEALVIVRGQTQWCIA*IGLASE Trigger: CTCACTGGCCAACCCAATGCAGGCAATACACCATTG...TGTCTGGCCTCTAACAATTACTAGGGCTTCAAGGTCAGGCCCTCTTTCTTGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
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| 3UTR CAA 90 bp | TTCCAGCCATCCCCAGCAAATTCGACACAGTCTTCCTCACCGATGTaGTTAGGCTCCCCTCTATTCCAATATTTCTGGAATCTGGATGAC | + |
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Preference number: 2 (lower is better) Translates to: FQPSPANSTQSSSPM*LGSPLFQYFWNLDD Trigger: GTCATCCAGATTCCAGAAATATTGGAATAGAGGGGAGCCTAACAACATCGGTGAGGAAGACTGTGTCGAATTTGCTGGGGATGGCTGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111014.8 |
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| 3UTR-3UTR TCA 90 bp | CTAGACTACCTGACAATAGACAAATGGCTGGGGAGATGCTTAGTGGATAAGAGTCCTTTTTCACGATCCTaGGGCCAACAGGCAGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: LDYLTIDKWLGRCLVDKSPFSRS*GQQAGR Trigger: TCTTCCTGCCTGTTGGCCTCAGGATCGTGAAAAAGG...ACTCTTATCCACTAAGCATCTCCCCAGCCATTTGTCTATTGTCAGGTAGTCTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
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| 3UTR-3UTR TCA 90 bp | TTAGTGGATAAGAGTGCTGATGTGCAAGAAAGAGGGCCTGACCTTGAAGCCCTATCTTCTTCTGACCTTTaGGTGTATGTGTCTCAGCAA | + |
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Preference number: 2 (lower is better) Translates to: LVDKSADVQERGPDLEALSSSDL*VYVSQQ Trigger: TTGCTGAGACACATACACTCAAAGGTCAGAAGAAGA...TAGGGCTTCAAGGTCAGGCCCTCTTTCTTGCACATCAGCACTCTTATCCACTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGAGAAACCTGAAAGCAAAAGGACAATAGTGAGTCCCTTTGTGATAGTCAGCATTGTCTTAAGTTCCTaGCATCCTGACCTCCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: PEKPESKRTIVSPFVIVSIVLSS*HPDLPA Trigger: AGCAGGGAGGTCAGGATGGCAGGAACTTAAGACAAT...GCTGACTATCACAAAGGGACTCACTATTGTCCTTTTGCTTTCAGGTTTCTCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
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| 3UTR-3UTR CCA 90 bp | CAACTCCTGTCTCAAGGGAGTAAAGAGCTATCAAAGAGAACACCAATGTCTTCTGCACATCCATGTGCCTaGCAGAATGGCATGAAGGTA | + |
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Preference number: 2 (lower is better) Translates to: QLLSQGSKELSKRTPMSSAHPCA*QNGMKV Trigger: TACCTTCATGCCATTCTGCCAGGCACATGGATGTGC...AGAAGACATTGGTGTTCTCTTTGATAGCTCTTTACTCCCTTGAGACAGGAGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
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| 3UTR-3UTR CCA 90 bp | GTGCAAGAAAGAGGGCCTGACCTTGAAGCCCTAGTAATTGTTAGAGGCCAGACACATTTAGGAGGTGAGTaGAGACAGAAAAATGTTGGA | + |
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Preference number: 2 (lower is better) Translates to: VQERGPDLEALVIVRGQTHLGGE*RQKNVG Trigger: TCCAACATTTTTCTGTCTCCACTCACCTCCTAAATG...TGTCTGGCCTCTAACAATTACTAGGGCTTCAAGGTCAGGCCCTCTTTCTTGCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
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| 3UTR-3UTR TCA 90 bp | AATGGAAAACACCCAGATTCTGAAAGCATCCTACATCAGGTAACTGCACTGAAGTCTCCTCCTGGCTGTTaGTGTGATGTGACCAATTGT | + |
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Preference number: 2 (lower is better) Translates to: NGKHPDSESILHQVTALKSPPGC*CDVTNC Trigger: ACAATTGGTCACATCACATCAACAGCCAGGAGGAGA...CTTCAGTGCAGTTACCTGATGTAGGATGCTTTCAGAATCTGGGTGTTTTCCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
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| 3UTR-3UTR GCA 90 bp | TACAGCAACAGTAAACTAGACTACCTGACAATAGACAAATGGCTGGGGAGATGCATGTGTGCGTTAGCTTaGACATACTTCTGTCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: YSNSKLDYLTIDKWLGRCMCALA*TYFCLL Trigger: GAGGAGACAGAAGTATGTGCAAGCTAACGCACACAT...GCATCTCCCCAGCCATTTGTCTATTGTCAGGTAGTCTAGTTTACTGTTGCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
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| 3UTR-3UTR CCA 90 bp | TTAGTGGATAAGAGTGCTGATGTGCAAGAAAGAGGGCCTGACCTTGAAGCCCTACATTTAGGAGGTGAGTaGAGACAGAAAAATGTTGGA | + |
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Preference number: 2 (lower is better) Translates to: LVDKSADVQERGPDLEALHLGGE*RQKNVG Trigger: TCCAACATTTTTCTGTCTCCACTCACCTCCTAAATG...TAGGGCTTCAAGGTCAGGCCCTCTTTCTTGCACATCAGCACTCTTATCCACTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
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| 3UTR-3UTR TCA 90 bp | CCAGAGAAACCTGAAAGCAAAAGGACAATAGTGAGTCCCTTTGTGATAGTCAGCAAGCCCAGAGAAACCTaGAAGCAAAAGGACAATAGT | + |
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Preference number: 2 (lower is better) Translates to: PEKPESKRTIVSPFVIVSKPRET*KQKDNS Trigger: ACTATTGTCCTTTTGCTTTCAGGTTTCTCTGGGCTT...GCTGACTATCACAAAGGGACTCACTATTGTCCTTTTGCTTTCAGGTTTCTCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
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| 3UTR-3UTR TCA 90 bp | ATAGACAAATGGCTGGGGAGATGCTTAGTGGATAAGAGTGCTGATGTGCAAGAATCTTCTTCTGACCTTTaGGTGTATGTGTCTCAGCAA | + |
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Preference number: 2 (lower is better) Translates to: IDKWLGRCLVDKSADVQESSSDL*VYVSQQ Trigger: TTGCTGAGACACATACACTCAAAGGTCAGAAGAAGA...TTCTTGCACATCAGCACTCTTATCCACTAAGCATCTCCCCAGCCATTTGTCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
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| 3UTR-3UTR TCA 90 bp | ATAGACAAATGGCTGGGGAGATGCTTAGTGGATAAGAGTGCTGATGTGCAAGAAACCAATGTCTTCTTCTaGCCTTTGAGTGTATGTGTC | + |
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Preference number: 2 (lower is better) Translates to: IDKWLGRCLVDKSADVQETNVFF*PLSVCV Trigger: GACACATACACTCAAAGGTCAGAAGAAGACATTGGT...TTCTTGCACATCAGCACTCTTATCCACTAAGCATCTCCCCAGCCATTTGTCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
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| 3UTR-3UTR CCA 90 bp | TACAGCAACAGTAAACTAGACTACCTGACAATAGACAAATGGCTGGGGAGATGCTCTCAGCAAGGAAGATaGAGTAGGTTAATGGAAAAC | + |
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Preference number: 2 (lower is better) Translates to: YSNSKLDYLTIDKWLGRCSQQGR*SRLMEN Trigger: GTTTTCCATTAACCTACTCCATCTTCCTTGCTGAGA...GCATCTCCCCAGCCATTTGTCTATTGTCAGGTAGTCTAGTTTACTGTTGCTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
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| 3UTR-3UTR CCA 90 bp | TTAGTGGATAAGAGTGCTGATGTGCAAGAAAGAGGGCCTGACCTTGAAGCCCTACTATTCCAATATTTCTaGAATCTGGATGACAGAGTA | + |
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Preference number: 2 (lower is better) Translates to: LVDKSADVQERGPDLEALLFQYF*NLDDRV Trigger: TACTCTGTCATCCAGATTCCAGAAATATTGGAATAG...TAGGGCTTCAAGGTCAGGCCCTCTTTCTTGCACATCAGCACTCTTATCCACTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111014.8 |
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| 3UTR CCA 72 bp | AGGAGCTGGCACGAAAGTGAGGCACATCCATGTGCCTaGCAGAATGGCATGAAGGTAGGAGCGGAGATGAGC | + |
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Preference number: 3 (lower is better) Translates to: RSWHESEAHPCA*QNGMKVGAEMS Trigger: GCTCATCTCCGCTCCTACCTTCATGCCATTCTGCCAGGCACATGGATGTGCCTCACTTTCGTGCCAGCTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111014.8 |
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| 3UTR TCA 72 bp | AGGCCAACAGGCAGGAAGAAGGAGCTGGCACGAAAGTaGGGCACATCCATGTGCCTGGCAGAATGGCATGAA | + |
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Preference number: 3 (lower is better) Translates to: RPTGRKKELARK*GTSMCLAEWHE Trigger: TTCATGCCATTCTGCCAGGCACATGGATGTGCCTCACTTTCGTGCCAGCTCCTTCTTCCTGCCTGTTGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
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| 3UTR CCA 72 bp | GAAGGTAGGAGCGGAGATGAGCTAGCCTTCAGTGCATaGGGTTGCAGACTTCTTGCAGATCCAGAACTTTTT | + |
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Preference number: 3 (lower is better) Translates to: EGRSGDELAFSA*GCRLLADPELF Trigger: AAAAAGTTCTGGATCTGCAAGAAGTCTGCAACCCCATGCACTGAAGGCTAGCTCATCTCCGCTCCTACCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111014.8 |
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| 3UTR TCA 72 bp | ATAAAAAGAAGAATCCCAGAGCCTTTTTCACGATCCTaGGGCCAACAGGCAGGAAGAAGGAGCTGGCACGAA | + |
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Preference number: 3 (lower is better) Translates to: IKRRIPEPFSRS*GQQAGRRSWHE Trigger: TTCGTGCCAGCTCCTTCTTCCTGCCTGTTGGCCTCAGGATCGTGAAAAAGGCTCTGGGATTCTTCTTTTTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
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| 3UTR-3UTR CAA 90 bp | CTAGACTACCTGACAATAGACAAATGGCTGGGGAGATGCTTAGTGGATAAGAGTCTTCAGTGCATGGGGTaGCAGACTTCTTGCAGATCC | + |
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Preference number: 3 (lower is better) Translates to: LDYLTIDKWLGRCLVDKSLQCMG*QTSCRS Trigger: GGATCTGCAAGAAGTCTGCAACCCCATGCACTGAAG...ACTCTTATCCACTAAGCATCTCCCCAGCCATTTGTCTATTGTCAGGTAGTCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111014.8 |
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| 3UTR-3UTR CAA 90 bp | TTAGTGGATAAGAGTGCTGATGTGCAAGAAAGAGGGCCTGACCTTGAAGCCCTAGGAGACAGAAAAATGTaGGATCTTTCAGATCACCAG | + |
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Preference number: 3 (lower is better) Translates to: LVDKSADVQERGPDLEALGDRKM*DLSDHQ Trigger: CTGGTGATCTGAAAGATCCAACATTTTTCTGTCTCC...TAGGGCTTCAAGGTCAGGCCCTCTTTCTTGCACATCAGCACTCTTATCCACTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
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| 3UTR CCA 72 bp | CCGATGTTGTTAGGCTCCCCTCTATTCCAATATTTCTaGAATCTGGATGACAGAGTAGAACCATCTACCCAG | + |
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Preference number: 3 (lower is better) Translates to: PMLLGSPLFQYF*NLDDRVEPSTQ Trigger: CTGGGTAGATGGTTCTACTCTGTCATCCAGATTCCAGAAATATTGGAATAGAGGGGAGCCTAACAACATCGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111014.8 |
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| 3UTR TCA 72 bp | TGTGATGTGACCAATTGTCTTAAGTTCCTGCCATCCTaGCCTCCCTGCTCTCATCTGGAATGTAAGGTAAAA | + |
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Preference number: 3 (lower is better) Translates to: CDVTNCLKFLPS*PPCSHLECKVK Trigger: TTTTACCTTACATTCCAGATGAGAGCAGGGAGGTCAGGATGGCAGGAACTTAAGACAATTGGTCACATCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
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| 3UTR GCA 72 bp | CTAGACTACCTGACAATAGACAAATGGCTGGGGAGATaGTTAGTGGATAAGAGTGCTGATGTGCAAGAAAGA | + |
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Preference number: 3 (lower is better) Translates to: LDYLTIDKWLGR*LVDKSADVQER Trigger: TCTTTCTTGCACATCAGCACTCTTATCCACTAAGCATCTCCCCAGCCATTTGTCTATTGTCAGGTAGTCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
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| 3UTR-3UTR CAA 90 bp | ATAGACAAATGGCTGGGGAGATGCTTAGTGGATAAGAGTGCTGATGTGCAAGAAGGAGACAGAAAAATGTaGGATCTTTCAGATCACCAG | + |
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Preference number: 3 (lower is better) Translates to: IDKWLGRCLVDKSADVQEGDRKM*DLSDHQ Trigger: CTGGTGATCTGAAAGATCCAACATTTTTCTGTCTCC...TTCTTGCACATCAGCACTCTTATCCACTAAGCATCTCCCCAGCCATTTGTCTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
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| 3UTR TCA 72 bp | CTATCAAAGAGAACACCAATGTCTTCTTCTGACCTTTaGGTGTATGTGTCTCAGCAAGGAAGATGGAGTAGG | + |
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Preference number: 3 (lower is better) Translates to: LSKRTPMSSSDL*VYVSQQGRWSR Trigger: CCTACTCCATCTTCCTTGCTGAGACACATACACTCAAAGGTCAGAAGAAGACATTGGTGTTCTCTTTGATAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
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| 3UTR CCA 72 bp | AGCAACAGTAAACTAGACTACCTGACAATAGACAAATaGCTGGGGAGATGCTTAGTGGATAAGAGTGCTGAT | + |
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Preference number: 3 (lower is better) Translates to: SNSKLDYLTIDK*LGRCLVDKSAD Trigger: ATCAGCACTCTTATCCACTAAGCATCTCCCCAGCCATTTGTCTATTGTCAGGTAGTCTAGTTTACTGTTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
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| CDS-3UTR GCA 90 bp | AACAGGCAGGAAGAAGGAGCTGGCACGAAAGTGAGGCACATCCATGTGCCTGGCAGGAAGGAGAGCAGCTaGAGGACCAAGGGGACTTGG | + |
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Preference number: 4 (lower is better) Translates to: NRQEEGAGTKVRHIHVPGRKESS*RTKGTW Trigger: CCAAGTCCCCTTGGTCCTGCAGCTGCTCTCCTTCCT...GCCAGGCACATGGATGTGCCTCACTTTCGTGCCAGCTCCTTCTTCCTGCCTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
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| CDS-3UTR TCA 90 bp | AGTGAGGCACATCCATGTGCCTGGCAGAATGGCATGAAGGTAGGAGCGGAGATGCTCCTTCTTCAGGTCTaGCAGGCCCATCCAGGTTGG | + |
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Preference number: 4 (lower is better) Translates to: SEAHPCAWQNGMKVGAEMLLLQV*QAHPGW Trigger: CCAACCTGGATGGGCCTGTCAGACCTGAAGAAGGAG...CATCTCCGCTCCTACCTTCATGCCATTCTGCCAGGCACATGGATGTGCCTCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000171635.8 |
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| CDS-3UTR CCA 90 bp | AGTGAGGCACATCCATGTGCCTGGCAGAATGGCATGAAGGTAGGAGCGGAGATGCTACCCAGAGCCACGTaGCCTCCTTCTTCAGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: SEAHPCAWQNGMKVGAEMLPRAT*PPSSGL Trigger: CAGACCTGAAGAAGGAGGCCACGTGGCTCTGGGTAG...CATCTCCGCTCCTACCTTCATGCCATTCTGCCAGGCACATGGATGTGCCTCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000171635.8 |
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| CDS-3UTR CCA 90 bp | AACAGGCAGGAAGAAGGAGCTGGCACGAAAGTGAGGCACATCCATGTGCCTGGCGACTCATTCTTCCCTTaGGAGATGGGGATCCTGGAC | + |
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Preference number: 4 (lower is better) Translates to: NRQEEGAGTKVRHIHVPGDSFFP*EMGILD Trigger: GTCCAGGATCCCCATCTCCCAAGGGAAGAATGAGTC...GCCAGGCACATGGATGTGCCTCACTTTCGTGCCAGCTCCTTCTTCCTGCCTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
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| CDS-3UTR TCA 90 bp | AACAGGCAGGAAGAAGGAGCTGGCACGAAAGTGAGGCACATCCATGTGCCTGGCAGACTTGGAAAAGAATaGTCAGCAGGAGCCCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: NRQEEGAGTKVRHIHVPGRLGKE*SAGAQP Trigger: TGGCTGGGCTCCTGCTGATCATTCTTTTCCAAGTCT...GCCAGGCACATGGATGTGCCTCACTTTCGTGCCAGCTCCTTCTTCCTGCCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
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| CDS-3UTR GCA 90 bp | GCCAACAGGCAGGAAGAAGGAGCTGGCACGAAAGTGAGGCACATCCATGTGCCTATGGAGCTAAGAGGCTaGATCTTGGCTTCTGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: ANRQEEGAGTKVRHIHVPMELRG*ILASVE Trigger: CTCCACAGAAGCCAAGATGCAGCCTCTTAGCTCCAT...AGGCACATGGATGTGCCTCACTTTCGTGCCAGCTCCTTCTTCCTGCCTGTTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
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| CDS-3UTR GCA 90 bp | GCCAACAGGCAGGAAGAAGGAGCTGGCACGAAAGTGAGGCACATCCATGTGCCTGTGTCCCGAGCATCCTaGCAAACACTTGATTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ANRQEEGAGTKVRHIHVPVSRAS*QTLDSR Trigger: TCTGGAATCAAGTGTTTGGCAGGATGCTCGGGACAC...AGGCACATGGATGTGCCTCACTTTCGTGCCAGCTCCTTCTTCCTGCCTGTTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGCCTTTTTCACGATCCTGAGGCCAACAGGCAGGAAGAAGGAGCTGGCACGAGCTGGGTCAGTTCCTaGAGGATCTTCTCTTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QSLFHDPEANRQEEGAGTSWVSS*RIFSCS Trigger: GGAACAAGAGAAGATCCTCCAGGAACTGACCCAGCT...CGTGCCAGCTCCTTCTTCCTGCCTGTTGGCCTCAGGATCGTGAAAAAGGCTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
||
| CDS-3UTR CCA 90 bp | AGTGAGGCACATCCATGTGCCTGGCAGAATGGCATGAAGGTAGGAGCGGAGATGGACTCATTCTTCCCTTaGGAGATGGGGATCCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SEAHPCAWQNGMKVGAEMDSFFP*EMGILD Trigger: GTCCAGGATCCCCATCTCCCAAGGGAAGAATGAGTC...CATCTCCGCTCCTACCTTCATGCCATTCTGCCAGGCACATGGATGTGCCTCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 ENSMUST00000171635.8 |
||
| CDS-3UTR CCA 90 bp | AGTGAGGCACATCCATGTGCCTGGCAGAATGGCATGAAGGTAGGAGCGGAGATGGACTCATTCTGCCCCTaGAAGATGGGAATCCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SEAHPCAWQNGMKVGAEMDSFCP*KMGILD Trigger: GTCCAGGATTCCCATCTTCCAGGGGCAGAATGAGTC...CATCTCCGCTCCTACCTTCATGCCATTCTGCCAGGCACATGGATGTGCCTCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 ENSMUST00000171635.8 |
||
| CDS-3UTR CCA 90 bp | AACAGGCAGGAAGAAGGAGCTGGCACGAAAGTGAGGCACATCCATGTGCCTGGCCAGGCCCATCCAGGTTaGTCCTTTAGCCTTAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: NRQEEGAGTKVRHIHVPGQAHPG*SFSLRS Trigger: ACTTCTAAGGCTAAAGGACCAACCTGGATGGGCCTG...GCCAGGCACATGGATGTGCCTCACTTTCGTGCCAGCTCCTTCTTCCTGCCTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084086.9 |
||
| CDS-3UTR GCA 90 bp | AGTGAGGCACATCCATGTGCCTGGCAGAATGGCATGAAGGTAGGAGCGGAGATGATGGAGCTAAGAGGCTaGATCTTGGCTTCTGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SEAHPCAWQNGMKVGAEMMELRG*ILASVE Trigger: CTCCACAGAAGCCAAGATGCAGCCTCTTAGCTCCAT...CATCTCCGCTCCTACCTTCATGCCATTCTGCCAGGCACATGGATGTGCCTCACT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 ENSMUST00000171635.8 |
||
| CDS-3UTR GCA 90 bp | AGTGAGGCACATCCATGTGCCTGGCAGAATGGCATGAAGGTAGGAGCGGAGATGGCCTTAGAAGTCTGCTaGAGGAAGGTCTGCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SEAHPCAWQNGMKVGAEMALEVC*RKVCSS Trigger: TGAAGAGCAGACCTTCCTGCAGCAGACTTCTAAGGC...CATCTCCGCTCCTACCTTCATGCCATTCTGCCAGGCACATGGATGTGCCTCACT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000171635.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGCCTTTTTCACGATCCTGAGGCCAACAGGCAGGAAGAAGGAGCTGGCACGCTGCCTCTCGGTATTTaGGGTTTTGGAGACTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QSLFHDPEANRQEEGAGTLPLGI*GFGDLE Trigger: TTCCAAGTCTCCAAAACCCCAAATACCGAGAGGCAG...CGTGCCAGCTCCTTCTTCCTGCCTGTTGGCCTCAGGATCGTGAAAAAGGCTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
||
| CDS-3UTR CCA 90 bp | AGTGAGGCACATCCATGTGCCTGGCAGAATGGCATGAAGGTAGGAGCGGAGATGTCTGCCCCTGGAAGATaGGAATCCTGGACAAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SEAHPCAWQNGMKVGAEMSAPGR*ESWTRV Trigger: AACTCTTGTCCAGGATTCCCATCTTCCAGGGGCAGA...CATCTCCGCTCCTACCTTCATGCCATTCTGCCAGGCACATGGATGTGCCTCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 ENSMUST00000171635.8 |
||
| CDS-3UTR CCA 90 bp | AGTGAGGCACATCCATGTGCCTGGCAGAATGGCATGAAGGTAGGAGCGGAGATGCAGGCCCATCCAGGTTaGTCCTTTAGCCTTAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SEAHPCAWQNGMKVGAEMQAHPG*SFSLRS Trigger: ACTTCTAAGGCTAAAGGACCAACCTGGATGGGCCTG...CATCTCCGCTCCTACCTTCATGCCATTCTGCCAGGCACATGGATGTGCCTCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000171635.8 |
||
| CDS-3UTR CCA 90 bp | AGTGAGGCACATCCATGTGCCTGGCAGAATGGCATGAAGGTAGGAGCGGAGATGCTGCCTCTCGGTATTTaGGGTTTTGGAGACTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SEAHPCAWQNGMKVGAEMLPLGI*GFGDCQ Trigger: TTGGCAGTCTCCAAAACCCCAAATACCGAGAGGCAG...CATCTCCGCTCCTACCTTCATGCCATTCTGCCAGGCACATGGATGTGCCTCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171635.8 |
||
| CDS-3UTR GCA 90 bp | CAGAGCCTTTTTCACGATCCTGAGGCCAACAGGCAGGAAGAAGGAGCTGGCACGTTCTCTTGTTCCTTCTaGCTCTCGGTATTTGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: QSLFHDPEANRQEEGAGTFSCSF*LSVFGV Trigger: AACCCCAAATACCGAGAGGCAGAAGGAACAAGAGAA...CGTGCCAGCTCCTTCTTCCTGCCTGTTGGCCTCAGGATCGTGAAAAAGGCTCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
||
| CDS-3UTR GCA 90 bp | AGTGAGGCACATCCATGTGCCTGGCAGAATGGCATGAAGGTAGGAGCGGAGATGTGTATGGACTCATTCTaGCCCTGGAAGATGGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: SEAHPCAWQNGMKVGAEMCMDSF*PWKMGI Trigger: GATTCCCATCTTCCAGGGGCAGAATGAGTCCATACA...CATCTCCGCTCCTACCTTCATGCCATTCTGCCAGGCACATGGATGTGCCTCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 ENSMUST00000171635.8 |
||
| CDS-3UTR GCA 90 bp | AGTGAGGCACATCCATGTGCCTGGCAGAATGGCATGAAGGTAGGAGCGGAGATGTTCAGTGCATGGGGTTaGAGACTTCTTGCAGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: SEAHPCAWQNGMKVGAEMFSAWG*RLLADP Trigger: TGGATCTGCAAGAAGTCTGCAACCCCATGCACTGAA...CATCTCCGCTCCTACCTTCATGCCATTCTGCCAGGCACATGGATGTGCCTCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000171635.8 |
||
| CDS-3UTR CCA 90 bp | GCCAACAGGCAGGAAGAAGGAGCTGGCACGAAAGTGAGGCACATCCATGTGCCTAGATCTTCTCTTGTATaGACTCATTCTGCCCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ANRQEEGAGTKVRHIHVPRSSLV*THSAPG Trigger: TCCAGGGGCAGAATGAGTCCATACAAGAGAAGATCT...AGGCACATGGATGTGCCTCACTTTCGTGCCAGCTCCTTCTTCCTGCCTGTTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
||
| CDS-3UTR CCA 90 bp | GCCAACAGGCAGGAAGAAGGAGCTGGCACGAAAGTGAGGCACATCCATGTGCCTGGAAGCTGGAGATCTTaGAAAGAAGTTCAGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ANRQEEGAGTKVRHIHVPGSWRS*KEVQPS Trigger: TGAAGGCTGAACTTCTTTCCAAGATCTCCAGCTTCC...AGGCACATGGATGTGCCTCACTTTCGTGCCAGCTCCTTCTTCCTGCCTGTTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
||
| CDS-3UTR CCA 90 bp | TTAGTGGATAAGAGTGCTGATGTGCAAGAAAGAGGGCCTGACCTTGAAGCCCTACTACCCAGAGCCACGTaGCCTCCTTCTTCAGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LVDKSADVQERGPDLEALLPRAT*PPSSGL Trigger: CAGACCTGAAGAAGGAGGCCACGTGGCTCTGGGTAG...TAGGGCTTCAAGGTCAGGCCCTCTTTCTTGCACATCAGCACTCTTATCCACTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084086.9 |
||
| CDS-3UTR GCA 90 bp | AGTGAGGCACATCCATGTGCCTGGCAGAATGGCATGAAGGTAGGAGCGGAGATGTTCTCTTGTTCCTTCTaGCTCTCGGTATTTGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SEAHPCAWQNGMKVGAEMFSCSF*LSVFGV Trigger: AACCCCAAATACCGAGAGGCAGAAGGAACAAGAGAA...CATCTCCGCTCCTACCTTCATGCCATTCTGCCAGGCACATGGATGTGCCTCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 ENSMUST00000171635.8 |
||
| CDS-3UTR GCA 90 bp | CAGAGCCTTTTTCACGATCCTGAGGCCAACAGGCAGGAAGAAGGAGCTGGCACGAGTTCAGTTTTCAGCTaGATCAGTTGCTCAGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: QSLFHDPEANRQEEGAGTSSVFS*ISCSVI Trigger: GATCACTGAGCAACTGATGCAGCTGAAAACTGAACT...CGTGCCAGCTCCTTCTTCCTGCCTGTTGGCCTCAGGATCGTGAAAAAGGCTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
||
| CDS-3UTR GCA 90 bp | AGTGAGGCACATCCATGTGCCTGGCAGAATGGCATGAAGGTAGGAGCGGAGATGTGCTGCAGGAAGGTCTaGTCTTCATCACTATTGATG | + |
|
Preference number: 4 (lower is better) Translates to: SEAHPCAWQNGMKVGAEMCCRKV*SSSLLM Trigger: CATCAATAGTGATGAAGAGCAGACCTTCCTGCAGCA...CATCTCCGCTCCTACCTTCATGCCATTCTGCCAGGCACATGGATGTGCCTCACT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000171635.8 |
||
| CDS-3UTR CCA 90 bp | GTGCAAGAAAGAGGGCCTGACCTTGAAGCCCTAGTAATTGTTAGAGGCCAGACAGACTCATTCTTCCCTTaGGAGATGGGGATCCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VQERGPDLEALVIVRGQTDSFFP*EMGILD Trigger: GTCCAGGATCCCCATCTCCCAAGGGAAGAATGAGTC...TGTCTGGCCTCTAACAATTACTAGGGCTTCAAGGTCAGGCCCTCTTTCTTGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
||
| CDS-3UTR CCA 90 bp | AGAGCCTTTTTCACGATCCTGAGGCCAACAGGCAGGAAGAAGGAGCTGGCACGAAGATCTTCTCTTGTATaGACTCATTCTGCCCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RAFFTILRPTGRKKELARRSSLV*THSAPG Trigger: TCCAGGGGCAGAATGAGTCCATACAAGAGAAGATCT...TCGTGCCAGCTCCTTCTTCCTGCCTGTTGGCCTCAGGATCGTGAAAAAGGCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
||
| CDS-3UTR CCA 90 bp | AGTGAGGCACATCCATGTGCCTGGCAGAATGGCATGAAGGTAGGAGCGGAGATGAGATCTTCTCTTGTATaGACTCATTCTGCCCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SEAHPCAWQNGMKVGAEMRSSLV*THSAPG Trigger: TCCAGGGGCAGAATGAGTCCATACAAGAGAAGATCT...CATCTCCGCTCCTACCTTCATGCCATTCTGCCAGGCACATGGATGTGCCTCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 ENSMUST00000171635.8 |
||
| CDS-3UTR CCA 90 bp | AGTGAGGCACATCCATGTGCCTGGCAGAATGGCATGAAGGTAGGAGCGGAGATGGGAAGCTGGAGATCTTaGAAAGAAGTTCAGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SEAHPCAWQNGMKVGAEMGSWRS*KEVQPS Trigger: TGAAGGCTGAACTTCTTTCCAAGATCTCCAGCTTCC...CATCTCCGCTCCTACCTTCATGCCATTCTGCCAGGCACATGGATGTGCCTCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 ENSMUST00000171635.8 |
||
| CDS-3UTR TCA 90 bp | AGAGCCTTTTTCACGATCCTGAGGCCAACAGGCAGGAAGAAGGAGCTGGCACGAATCCTGCCAAACACTTaGTTCCAGAATTTGGTCGTA | + |
|
Preference number: 4 (lower is better) Translates to: RAFFTILRPTGRKKELARILPNT*FQNLVV Trigger: TACGACCAAATTCTGGAATCAAGTGTTTGGCAGGAT...TCGTGCCAGCTCCTTCTTCCTGCCTGTTGGCCTCAGGATCGTGAAAAAGGCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
||
| CDS-3UTR TCA 90 bp | AGAGCCTTTTTCACGATCCTGAGGCCAACAGGCAGGAAGAAGGAGCTGGCACGATTTCTGGAATCTGGATaGCAGAGTAGAACCATCTAC | + |
|
Preference number: 4 (lower is better) Translates to: RAFFTILRPTGRKKELARFLESG*QSRTIY Trigger: GTAGATGGTTCTACTCTGTCATCCAGATTCCAGAAA...TCGTGCCAGCTCCTTCTTCCTGCCTGTTGGCCTCAGGATCGTGAAAAAGGCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084086.9 |
||
| CDS-3UTR TCA 90 bp | AGTGAGGCACATCCATGTGCCTGGCAGAATGGCATGAAGGTAGGAGCGGAGATGTTTCTGGAATCTGGATaGCAGAGTAGAACCATCTAC | + |
|
Preference number: 4 (lower is better) Translates to: SEAHPCAWQNGMKVGAEMFLESG*QSRTIY Trigger: GTAGATGGTTCTACTCTGTCATCCAGATTCCAGAAA...CATCTCCGCTCCTACCTTCATGCCATTCTGCCAGGCACATGGATGTGCCTCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000171635.8 |
||
| CDS-3UTR TCA 90 bp | AGTGAGGCACATCCATGTGCCTGGCAGAATGGCATGAAGGTAGGAGCGGAGATGAGACTGCCAAACACTTaGTTCCAGAATTTGGTCGTA | + |
|
Preference number: 4 (lower is better) Translates to: SEAHPCAWQNGMKVGAEMRLPNT*FQNLVV Trigger: TACGACCAAATTCTGGAATCAAGTGTTTGGCAGTCT...CATCTCCGCTCCTACCTTCATGCCATTCTGCCAGGCACATGGATGTGCCTCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171635.8 |
||
| CDS-3UTR GCA 90 bp | CCAGAGAAACCTGAAAGCAAAAGGACAATAGTGAGTCCCTTTGTGATAGTCAGCAGGAAGGAGAGCAGCTaGAGGACCAAGGGGACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PEKPESKRTIVSPFVIVSRKESS*RTKGTW Trigger: CCAAGTCCCCTTGGTCCTGCAGCTGCTCTCCTTCCT...GCTGACTATCACAAAGGGACTCACTATTGTCCTTTTGCTTTCAGGTTTCTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
||
| CDS-3UTR GCA 90 bp | AGTGAGGCACATCCATGTGCCTGGCAGAATGGCATGAAGGTAGGAGCGGAGATGAGTTCAGTTTTCAGCTaGATCAGTTGCTCAGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: SEAHPCAWQNGMKVGAEMSSVFS*ISCSVI Trigger: GATCACTGAGCAACTGATGCAGCTGAAAACTGAACT...CATCTCCGCTCCTACCTTCATGCCATTCTGCCAGGCACATGGATGTGCCTCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 ENSMUST00000171635.8 |
||
| CDS-3UTR CCA 90 bp | CCAGAGAAACCTGAAAGCAAAAGGACAATAGTGAGTCCCTTTGTGATAGTCAGCAGGACCAAGGGGACTTaGCTGTGTCCCGAGCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: PEKPESKRTIVSPFVIVSRTKGT*LCPEHP Trigger: AGGATGCTCGGGACACAGCCAAGTCCCCTTGGTCCT...GCTGACTATCACAAAGGGACTCACTATTGTCCTTTTGCTTTCAGGTTTCTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
||
| CDS-3UTR CCA 90 bp | AGTGAGGCACATCCATGTGCCTGGCAGAATGGCATGAAGGTAGGAGCGGAGATGGGAAGATGGGAATCCTaGACAAGAGTTCAGTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SEAHPCAWQNGMKVGAEMGRWES*TRVQFS Trigger: TGAAAACTGAACTCTTGTCCAGGATTCCCATCTTCC...CATCTCCGCTCCTACCTTCATGCCATTCTGCCAGGCACATGGATGTGCCTCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 ENSMUST00000171635.8 |
||
| CDS-3UTR CCA 90 bp | CAACTCCTGTCTCAAGGGAGTAAAGAGCTATCAAAGAGAACACCAATGTCTTCTAGGACCAAGGGGACTTaGCTGTGTCCCGAGCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: QLLSQGSKELSKRTPMSSRTKGT*LCPEHP Trigger: AGGATGCTCGGGACACAGCCAAGTCCCCTTGGTCCT...AGAAGACATTGGTGTTCTCTTTGATAGCTCTTTACTCCCTTGAGACAGGAGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
||
| CDS-3UTR GCA 90 bp | GACACAGTCTTCCTCACCGATGTTGTTAGGCTCCCCTCTATTCCAATATTTCTGGTGTCCCGAGCATCCTaGCAAACACTTGATTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: DTVFLTDVVRLPSIPIFLVSRAS*QTLDSR Trigger: TCTGGAATCAAGTGTTTGGCAGGATGCTCGGGACAC...CAGAAATATTGGAATAGAGGGGAGCCTAACAACATCGGTGAGGAAGACTGTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111014.8 |
||
| CDS-3UTR GCA 90 bp | TTAGTGGATAAGAGTGCTGATGTGCAAGAAAGAGGGCCTGACCTTGAAGCCCTATGTATGGACTCATTCTaGCCCTGGAAGATGGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: LVDKSADVQERGPDLEALCMDSF*PWKMGI Trigger: GATTCCCATCTTCCAGGGGCAGAATGAGTCCATACA...TAGGGCTTCAAGGTCAGGCCCTCTTTCTTGCACATCAGCACTCTTATCCACTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
||
| CDS-3UTR GCA 90 bp | TTAGTGGATAAGAGTGCTGATGTGCAAGAAAGAGGGCCTGACCTTGAAGCCCTATTCAGTGCATGGGGTTaGAGACTTCTTGCAGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LVDKSADVQERGPDLEALFSAWG*RLLADP Trigger: TGGATCTGCAAGAAGTCTGCAACCCCATGCACTGAA...TAGGGCTTCAAGGTCAGGCCCTCTTTCTTGCACATCAGCACTCTTATCCACTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084086.9 |
||
| CDS-3UTR CCA 90 bp | AGAGTCATTCCAGCCATCCCCAGCAAATTCGACACAGTCTTCCTCACCGATGTTGGAAGCTGGAGATCTTaGAAAGAAGTTCAGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RVIPAIPSKFDTVFLTDVGSWRS*KEVQPS Trigger: TGAAGGCTGAACTTCTTTCCAAGATCTCCAGCTTCC...AACATCGGTGAGGAAGACTGTGTCGAATTTGCTGGGGATGGCTGGAATGACTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111014.8 |
||
| CDS-3UTR TCA 90 bp | CTAGACTACCTGACAATAGACAAATGGCTGGGGAGATGCTTAGTGGATAAGAGTAGACTTGGAAAAGAATaGTCAGCAGGAGCCCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LDYLTIDKWLGRCLVDKSRLGKE*SAGAQP Trigger: TGGCTGGGCTCCTGCTGATCATTCTTTTCCAAGTCT...ACTCTTATCCACTAAGCATCTCCCCAGCCATTTGTCTATTGTCAGGTAGTCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
||
| CDS-3UTR GCA 90 bp | CCAGAGAAACCTGAAAGCAAAAGGACAATAGTGAGTCCCTTTGTGATAGTCAGCGCCTTAGAAGTCTGCTaGAGGAAGGTCTGCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PEKPESKRTIVSPFVIVSALEVC*RKVCSS Trigger: TGAAGAGCAGACCTTCCTGCAGCAGACTTCTAAGGC...GCTGACTATCACAAAGGGACTCACTATTGTCCTTTTGCTTTCAGGTTTCTCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084086.9 |
||
| CDS-3UTR CCA 90 bp | TACAGCAACAGTAAACTAGACTACCTGACAATAGACAAATGGCTGGGGAGATGCTCTGCCCCTGGAAGATaGGAATCCTGGACAAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: YSNSKLDYLTIDKWLGRCSAPGR*ESWTRV Trigger: AACTCTTGTCCAGGATTCCCATCTTCCAGGGGCAGA...GCATCTCCCCAGCCATTTGTCTATTGTCAGGTAGTCTAGTTTACTGTTGCTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
||
| CDS-3UTR CCA 90 bp | AATGGAAAACACCCAGATTCTGAAAGCATCCTACATCAGGTAACTGCACTGAAGGACTCATTCTGCCCCTaGAAGATGGGAATCCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: NGKHPDSESILHQVTALKDSFCP*KMGILD Trigger: GTCCAGGATTCCCATCTTCCAGGGGCAGAATGAGTC...CTTCAGTGCAGTTACCTGATGTAGGATGCTTTCAGAATCTGGGTGTTTTCCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
||
| CDS-3UTR CCA 90 bp | CAACTCCTGTCTCAAGGGAGTAAAGAGCTATCAAAGAGAACACCAATGTCTTCTGACTCATTCTGCCCCTaGAAGATGGGAATCCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: QLLSQGSKELSKRTPMSSDSFCP*KMGILD Trigger: GTCCAGGATTCCCATCTTCCAGGGGCAGAATGAGTC...AGAAGACATTGGTGTTCTCTTTGATAGCTCTTTACTCCCTTGAGACAGGAGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
||
| CDS-3UTR CCA 90 bp | AGTGAGGCACATCCATGTGCCTGGCAGAATGGCATGAAGGTAGGAGCGGAGATGCTATTCCAATATTTCTaGAATCTGGATGACAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SEAHPCAWQNGMKVGAEMLFQYF*NLDDRV Trigger: TACTCTGTCATCCAGATTCCAGAAATATTGGAATAG...CATCTCCGCTCCTACCTTCATGCCATTCTGCCAGGCACATGGATGTGCCTCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000171635.8 |
||
| CDS-3UTR TCA 90 bp | TTAGTGGATAAGAGTGCTGATGTGCAAGAAAGAGGGCCTGACCTTGAAGCCCTAATCCTGCCAAACACTTaGTTCCAGAATTTGGTCGTA | + |
|
Preference number: 4 (lower is better) Translates to: LVDKSADVQERGPDLEALILPNT*FQNLVV Trigger: TACGACCAAATTCTGGAATCAAGTGTTTGGCAGGAT...TAGGGCTTCAAGGTCAGGCCCTCTTTCTTGCACATCAGCACTCTTATCCACTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
||
| CDS-3UTR GCA 90 bp | CAACTCCTGTCTCAAGGGAGTAAAGAGCTATCAAAGAGAACACCAATGTCTTCTATGGAGCTAAGAGGCTaGATCTTGGCTTCTGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QLLSQGSKELSKRTPMSSMELRG*ILASVE Trigger: CTCCACAGAAGCCAAGATGCAGCCTCTTAGCTCCAT...AGAAGACATTGGTGTTCTCTTTGATAGCTCTTTACTCCCTTGAGACAGGAGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
||
| CDS-3UTR CCA 90 bp | CTAGACTACCTGACAATAGACAAATGGCTGGGGAGATGCTTAGTGGATAAGAGTCTGCCTCTCGGTATTTaGGGTTTTGGAGACTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LDYLTIDKWLGRCLVDKSLPLGI*GFGDLE Trigger: TTCCAAGTCTCCAAAACCCCAAATACCGAGAGGCAG...ACTCTTATCCACTAAGCATCTCCCCAGCCATTTGTCTATTGTCAGGTAGTCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
||
| CDS-3UTR CCA 90 bp | AATGGAAAACACCCAGATTCTGAAAGCATCCTACATCAGGTAACTGCACTGAAGTCTGCCCCTGGAAGATaGGAATCCTGGACAAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: NGKHPDSESILHQVTALKSAPGR*ESWTRV Trigger: AACTCTTGTCCAGGATTCCCATCTTCCAGGGGCAGA...CTTCAGTGCAGTTACCTGATGTAGGATGCTTTCAGAATCTGGGTGTTTTCCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
||
| 3UTR CAA 72 bp | TCCCCAGCAAATTCGACACAGTCTTCCTCACCGATGTaGTTAGGCTCCCCTCTATTCCAATATTTCTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SPANSTQSSSPM*LGSPLFQYFWN Trigger: ATTCCAGAAATATTGGAATAGAGGGGAGCCTAACAACATCGGTGAGGAAGACTGTGTCGAATTTGCTGGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111014.8 |
||
| CDS-3UTR GCA 90 bp | CTAGACTACCTGACAATAGACAAATGGCTGGGGAGATGCTTAGTGGATAAGAGTTTCTCTTGTTCCTTCTaGCTCTCGGTATTTGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LDYLTIDKWLGRCLVDKSFSCSF*LSVFGV Trigger: AACCCCAAATACCGAGAGGCAGAAGGAACAAGAGAA...ACTCTTATCCACTAAGCATCTCCCCAGCCATTTGTCTATTGTCAGGTAGTCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
||
| CDS-3UTR GCA 90 bp | CCAGAGAAACCTGAAAGCAAAAGGACAATAGTGAGTCCCTTTGTGATAGTCAGCTGCTGCAGGAAGGTCTaGTCTTCATCACTATTGATG | + |
|
Preference number: 4 (lower is better) Translates to: PEKPESKRTIVSPFVIVSCCRKV*SSSLLM Trigger: CATCAATAGTGATGAAGAGCAGACCTTCCTGCAGCA...GCTGACTATCACAAAGGGACTCACTATTGTCCTTTTGCTTTCAGGTTTCTCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084086.9 |
||
| CDS-3UTR GCA 90 bp | CAACTCCTGTCTCAAGGGAGTAAAGAGCTATCAAAGAGAACACCAATGTCTTCTAGTTCAGTTTTCAGCTaGATCAGTTGCTCAGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: QLLSQGSKELSKRTPMSSSSVFS*ISCSVI Trigger: GATCACTGAGCAACTGATGCAGCTGAAAACTGAACT...AGAAGACATTGGTGTTCTCTTTGATAGCTCTTTACTCCCTTGAGACAGGAGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
||
| CDS-3UTR CCA 90 bp | AATGGAAAACACCCAGATTCTGAAAGCATCCTACATCAGGTAACTGCACTGAAGGGAAGATGGGAATCCTaGACAAGAGTTCAGTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: NGKHPDSESILHQVTALKGRWES*TRVQFS Trigger: TGAAAACTGAACTCTTGTCCAGGATTCCCATCTTCC...CTTCAGTGCAGTTACCTGATGTAGGATGCTTTCAGAATCTGGGTGTTTTCCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
||
| CDS TCA 90 bp | GATGGGCCTTCCTCTGGAGATGGGGGCATGCCTGGGTCTGCTGGATaGCAGAGTAGAACCATCTACCCAGAGCCACGTGGCCTCCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: DGPSSGDGGMPGSAG*QSRTIYPEPRGLLL Trigger: AAGAAGGAGGCCACGTGGCTCTGGGTAGATGGTTCTACTCTGTCATCCAGCAGACCCAGGCATGCCCCCATCTCCAGAGGAAGGCCCATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000188386.2 |
||
| CDS-3UTR CAA 90 bp | GCCAACAGGCAGGAAGAAGGAGCTGGCACGAAAGTGAGGCACATCCATGTGCCTCTAAGAGGCTGCATCTaGGCTTCTGTGGAGTCACTC | + |
|
Preference number: 5 (lower is better) Translates to: ANRQEEGAGTKVRHIHVPLRGCI*ASVESL Trigger: GAGTGACTCCACAGAAGCCAAGATGCAGCCTCTTAG...AGGCACATGGATGTGCCTCACTTTCGTGCCAGCTCCTTCTTCCTGCCTGTTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
||
| CDS-3UTR CAA 90 bp | AGTGAGGCACATCCATGTGCCTGGCAGAATGGCATGAAGGTAGGAGCGGAGATGGGACTCATTCTTCCCTaGGGAGATGGGGATCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SEAHPCAWQNGMKVGAEMGLILP*GDGDPG Trigger: TCCAGGATCCCCATCTCCCAAGGGAAGAATGAGTCC...CATCTCCGCTCCTACCTTCATGCCATTCTGCCAGGCACATGGATGTGCCTCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 ENSMUST00000171635.8 |
||
| CDS-3UTR CAA 90 bp | CAGAGCCTTTTTCACGATCCTGAGGCCAACAGGCAGGAAGAAGGAGCTGGCACGCTTCAGTGCATGGGGTaGCAGACTTCTTGCAGATCC | + |
|
Preference number: 5 (lower is better) Translates to: QSLFHDPEANRQEEGAGTLQCMG*QTSCRS Trigger: GGATCTGCAAGAAGTCTGCAACCCCATGCACTGAAG...CGTGCCAGCTCCTTCTTCCTGCCTGTTGGCCTCAGGATCGTGAAAAAGGCTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084086.9 |
||
| CDS TCA 90 bp | AGTAGAACCATCTACCCAGAGCCACGTGGCCTCCTTCTTCAGGTCTaGCAGGCCCATCCAGGTTGGTCCTTTAGCCTTAGAAGTCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SRTIYPEPRGLLLQV*QAHPGWSFSLRSLL Trigger: CAGCAGACTTCTAAGGCTAAAGGACCAACCTGGATGGGCCTGTCAGACCTGAAGAAGGAGGCCACGTGGCTCTGGGTAGATGGTTCTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084086.9 ENSMUST00000171635.8 ENSMUST00000188386.2 |
||
| CDS CCA 90 bp | CCAGCCAAGAACAGGAAGGAGAGCAGCTGCAGGACCAAGGGGACTTaGCTGTGTCCCGAGCATCCTGCCAAACACTTGATTCCAGAATTT | + |
|
Preference number: 5 (lower is better) Translates to: PAKNRKESSCRTKGT*LCPEHPAKHLIPEF Trigger: AAATTCTGGAATCAAGTGTTTGGCAGGATGCTCGGGACACAGCCAAGTCCCCTTGGTCCTGCAGCTGCTCTCCTTCCTGTTCTTGGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
||
| CDS-3UTR CAA 90 bp | AGTGAGGCACATCCATGTGCCTGGCAGAATGGCATGAAGGTAGGAGCGGAGATGCTAAGAGGCTGCATCTaGGCTTCTGTGGAGTCACTC | + |
|
Preference number: 5 (lower is better) Translates to: SEAHPCAWQNGMKVGAEMLRGCI*ASVESL Trigger: GAGTGACTCCACAGAAGCCAAGATGCAGCCTCTTAG...CATCTCCGCTCCTACCTTCATGCCATTCTGCCAGGCACATGGATGTGCCTCACT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 ENSMUST00000171635.8 |
||
| CDS-3UTR CAA 90 bp | AGAGCCTTTTTCACGATCCTGAGGCCAACAGGCAGGAAGAAGGAGCTGGCACGACTGGAGGATCTTCTCTaGTTCCTTCTGCCTCTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: RAFFTILRPTGRKKELARLEDLL*FLLPLG Trigger: ACCGAGAGGCAGAAGGAACAAGAGAAGATCCTCCAG...TCGTGCCAGCTCCTTCTTCCTGCCTGTTGGCCTCAGGATCGTGAAAAAGGCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
||
| CDS-3UTR CAA 90 bp | AGTGAGGCACATCCATGTGCCTGGCAGAATGGCATGAAGGTAGGAGCGGAGATGCTGGAGGATCTTCTCTaGTTCCTTCTGCCTCTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: SEAHPCAWQNGMKVGAEMLEDLL*FLLPLG Trigger: ACCGAGAGGCAGAAGGAACAAGAGAAGATCCTCCAG...CATCTCCGCTCCTACCTTCATGCCATTCTGCCAGGCACATGGATGTGCCTCACT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 ENSMUST00000171635.8 |
||
| CDS-3UTR CAA 90 bp | AGTGAGGCACATCCATGTGCCTGGCAGAATGGCATGAAGGTAGGAGCGGAGATGCTTCAGTGCATGGGGTaGCAGACTTCTTGCAGATCC | + |
|
Preference number: 5 (lower is better) Translates to: SEAHPCAWQNGMKVGAEMLQCMG*QTSCRS Trigger: GGATCTGCAAGAAGTCTGCAACCCCATGCACTGAAG...CATCTCCGCTCCTACCTTCATGCCATTCTGCCAGGCACATGGATGTGCCTCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000171635.8 |
||
| CDS-3UTR CAA 90 bp | AGTGAGGCACATCCATGTGCCTGGCAGAATGGCATGAAGGTAGGAGCGGAGATGTCTGCCTCTCGGTATTaGGGGTTTTGGAGACTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SEAHPCAWQNGMKVGAEMSASRY*GFWRLP Trigger: TGGCAGTCTCCAAAACCCCAAATACCGAGAGGCAGA...CATCTCCGCTCCTACCTTCATGCCATTCTGCCAGGCACATGGATGTGCCTCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171635.8 |
||
| CDS CCA 90 bp | ATCAGTTGCTCAGTGATCTTCGCCTGCATGGACTCATTCTTCCCTTaGGAGATGGGGATCCTGGACGTAAGCTCATCTGTCAGCTGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: ISCSVIFACMDSFFP*EMGILDVSSSVSWV Trigger: GACCCAGCTGACAGATGAGCTTACGTCCAGGATCCCCATCTCCCAAGGGAAGAATGAGTCCATGCAGGCGAAGATCACTGAGCAACTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 ENSMUST00000171635.8 ENSMUST00000188386.2 |
||
| CDS-3UTR CAA 90 bp | GCCAACAGGCAGGAAGAAGGAGCTGGCACGAAAGTGAGGCACATCCATGTGCCTCTCAGAGATCTTCTCTaGTATGGACTCATTCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ANRQEEGAGTKVRHIHVPLRDLL*YGLILP Trigger: GGGCAGAATGAGTCCATACAAGAGAAGATCTCTGAG...AGGCACATGGATGTGCCTCACTTTCGTGCCAGCTCCTTCTTCCTGCCTGTTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
||
| CDS-3UTR CAA 90 bp | AGTGAGGCACATCCATGTGCCTGGCAGAATGGCATGAAGGTAGGAGCGGAGATGGGGAAGCTGGAGATCTaGGAAAGAAGTTCAGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SEAHPCAWQNGMKVGAEMGKLEI*ERSSAF Trigger: GAAGGCTGAACTTCTTTCCAAGATCTCCAGCTTCCC...CATCTCCGCTCCTACCTTCATGCCATTCTGCCAGGCACATGGATGTGCCTCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 ENSMUST00000171635.8 |
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| CDS-3UTR CAA 90 bp | AGTGAGGCACATCCATGTGCCTGGCAGAATGGCATGAAGGTAGGAGCGGAGATGCTCAGAGATCTTCTCTaGTATGGACTCATTCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SEAHPCAWQNGMKVGAEMLRDLL*YGLILP Trigger: GGGCAGAATGAGTCCATACAAGAGAAGATCTCTGAG...CATCTCCGCTCCTACCTTCATGCCATTCTGCCAGGCACATGGATGTGCCTCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 ENSMUST00000171635.8 |
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| CDS-3UTR CAA 90 bp | AGTGAGGCACATCCATGTGCCTGGCAGAATGGCATGAAGGTAGGAGCGGAGATGCTTCAGCTGCATCAGTaGCTCAGAGATCTTCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SEAHPCAWQNGMKVGAEMLQLHQ*LRDLLL Trigger: CAAGAGAAGATCTCTGAGCAACTGATGCAGCTGAAG...CATCTCCGCTCCTACCTTCATGCCATTCTGCCAGGCACATGGATGTGCCTCACT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 ENSMUST00000171635.8 |
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| CDS-3UTR CAA 90 bp | AGTGAGGCACATCCATGTGCCTGGCAGAATGGCATGAAGGTAGGAGCGGAGATGCATCTGTACCAGCTGTaGGTAGATCTTCTCCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SEAHPCAWQNGMKVGAEMHLYQL*VDLLLL Trigger: AAGCAGGAGAAGATCTACCAACAGCTGGTACAGATG...CATCTCCGCTCCTACCTTCATGCCATTCTGCCAGGCACATGGATGTGCCTCACT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 ENSMUST00000171635.8 |
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| CDS-3UTR CAA 90 bp | CAGAGCCTTTTTCACGATCCTGAGGCCAACAGGCAGGAAGAAGGAGCTGGCACGTCGGTATTTGGGGTTTaGGAGACTTGGAAAAGAATG | + |
|
Preference number: 5 (lower is better) Translates to: QSLFHDPEANRQEEGAGTSVFGV*ETWKRM Trigger: CATTCTTTTCCAAGTCTCCAAAACCCCAAATACCGA...CGTGCCAGCTCCTTCTTCCTGCCTGTTGGCCTCAGGATCGTGAAAAAGGCTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
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| CDS TCA 90 bp | GAATCCTGGACAAGAGTTCAGTTTTCAGCTGCATCAGTTGCTCAGTaGTCTTCGCCTGCATGGACTCATTCTTCCCTTGGGAGATGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: ESWTRVQFSAASVAQ*SSPAWTHSSLGRWG Trigger: TCCCCATCTCCCAAGGGAAGAATGAGTCCATGCAGGCGAAGATCACTGAGCAACTGATGCAGCTGAAAACTGAACTCTTGTCCAGGATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 ENSMUST00000171635.8 ENSMUST00000188386.2 |
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| CDS GCA 90 bp | TGCCCCTGGAAGATGGGAATCCTGGACAAGAGTTCAGTTTTCAGCTaGATCAGTTGCTCAGTGATCTTCGCCTGCATGGACTCATTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CPWKMGILDKSSVFS*ISCSVIFACMDSFF Trigger: GAAGAATGAGTCCATGCAGGCGAAGATCACTGAGCAACTGATGCAGCTGAAAACTGAACTCTTGTCCAGGATTCCCATCTTCCAGGGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 ENSMUST00000171635.8 ENSMUST00000188386.2 |
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| CDS GCA 90 bp | AAGATGGGAATCCTGGACAAGAGTTCAGTTTTCAGCTGCATCAGTTaGTCAGTGATCTTCGCCTGCATGGACTCATTCTTCCCTTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: KMGILDKSSVFSCIS*SVIFACMDSFFPWE Trigger: CTCCCAAGGGAAGAATGAGTCCATGCAGGCGAAGATCACTGAGCAACTGATGCAGCTGAAAACTGAACTCTTGTCCAGGATTCCCATCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 ENSMUST00000171635.8 ENSMUST00000188386.2 |
||
| CDS GCA 90 bp | TCTGTCAGCTGGGTCAGTTCCTGGAGGATCTTCTCTTGTTCCTTCTaGCTCTCGGTATTTGGGGTTTTGGAGACTGCCAAACACTTGATT | + |
|
Preference number: 5 (lower is better) Translates to: SVSWVSSWRIFSCSF*LSVFGVLETAKHLI Trigger: AATCAAGTGTTTGGCAGTCTCCAAAACCCCAAATACCGAGAGGCAGAAGGAACAAGAGAAGATCCTCCAGGAACTGACCCAGCTGACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000171635.8 ENSMUST00000188386.2 |
||
| CDS CCA 90 bp | GTTCAGCCTTCAGCTGCATCAGTTGCTCAGAGATCTTCTCTTGTATaGACTCATTCTGCCCCTGGAAGATGGGAATCCTGGACAAGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: VQPSAASVAQRSSLV*THSAPGRWESWTRV Trigger: AACTCTTGTCCAGGATTCCCATCTTCCAGGGGCAGAATGAGTCCATACAAGAGAAGATCTCTGAGCAACTGATGCAGCTGAAGGCTGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 ENSMUST00000171635.8 ENSMUST00000188386.2 |
||
| CDS CCA 90 bp | TATTCCAATATTTCTGGAATCTCCTTCCAGAATGCATATTGTAGATaGGCCTTCCTCTGGAGATGGGGGCATGCCTGGGTCTGCTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: YSNISGISFQNAYCR*AFLWRWGHAWVCWM Trigger: CATCCAGCAGACCCAGGCATGCCCCCATCTCCAGAGGAAGGCCCATCTACAATATGCATTCTGGAAGGAGATTCCAGAAATATTGGAATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000188386.2 |
||
| CDS-3UTR CAA 90 bp | CCAGAGAAACCTGAAAGCAAAAGGACAATAGTGAGTCCCTTTGTGATAGTCAGCGGACTCATTCTTCCCTaGGGAGATGGGGATCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: PEKPESKRTIVSPFVIVSGLILP*GDGDPG Trigger: TCCAGGATCCCCATCTCCCAAGGGAAGAATGAGTCC...GCTGACTATCACAAAGGGACTCACTATTGTCCTTTTGCTTTCAGGTTTCTCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
||
| CDS-3UTR CAA 90 bp | CAGTCTTCCTCACCGATGTTGTTAGGCTCCCCTCTATTCCAATATTTCTGGAATGGACTCATTCTTCCCTaGGGAGATGGGGATCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: QSSSPMLLGSPLFQYFWNGLILP*GDGDPG Trigger: TCCAGGATCCCCATCTCCCAAGGGAAGAATGAGTCC...ATTCCAGAAATATTGGAATAGAGGGGAGCCTAACAACATCGGTGAGGAAGACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111014.8 |
||
| CDS-3UTR CAA 90 bp | GTGCAAGAAAGAGGGCCTGACCTTGAAGCCCTAGTAATTGTTAGAGGCCAGACACATCTGTACCAGCTGTaGGTAGATCTTCTCCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VQERGPDLEALVIVRGQTHLYQL*VDLLLL Trigger: AAGCAGGAGAAGATCTACCAACAGCTGGTACAGATG...TGTCTGGCCTCTAACAATTACTAGGGCTTCAAGGTCAGGCCCTCTTTCTTGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
||
| CDS TCA 90 bp | TGCTGCAGGAAGGTCTGCTCTTCATCACTATTGATGATGACTAGTTaGGCCTTCACTTCTTTGCAAGCTGTGACGGCGTCATTCCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: CCRKVCSSSLLMMTS*AFTSLQAVTASFQF Trigger: GAACTGGAATGACGCCGTCACAGCTTGCAAAGAAGTGAAGGCTCAACTAGTCATCATCAATAGTGATGAAGAGCAGACCTTCCTGCAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084086.9 ENSMUST00000171635.8 ENSMUST00000188386.2 |
||
| CDS GCA 90 bp | AGCTGCATCAGTTGCTCAGAGATCTTCTCTTGTATGGACTCATTCTaGCCCTGGAAGATGGGAATCCTGGACAAGAGTTCAGTTTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SCISCSEIFSCMDSF*PWKMGILDKSSVFS Trigger: GCTGAAAACTGAACTCTTGTCCAGGATTCCCATCTTCCAGGGGCAGAATGAGTCCATACAAGAGAAGATCTCTGAGCAACTGATGCAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 ENSMUST00000171635.8 ENSMUST00000188386.2 |
||
| CDS GCA 90 bp | AAGCTGGAGATCTTGGAAAGAAGTTCAGCCTTCAGCTGCATCAGTTaGTCAGAGATCTTCTCTTGTATGGACTCATTCTGCCCCTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: KLEILERSSAFSCIS*SEIFSCMDSFCPWK Trigger: CTTCCAGGGGCAGAATGAGTCCATACAAGAGAAGATCTCTGAGCAACTGATGCAGCTGAAGGCTGAACTTCTTTCCAAGATCTCCAGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 ENSMUST00000171635.8 ENSMUST00000188386.2 |
||
| CDS CCA 90 bp | GCTCAGAGATCTTCTCTTGTATGGACTCATTCTGCCCCTGGAAGATaGGAATCCTGGACAAGAGTTCAGTTTTCAGCTGCATCAGTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: AQRSSLVWTHSAPGR*ESWTRVQFSAASVA Trigger: AGCAACTGATGCAGCTGAAAACTGAACTCTTGTCCAGGATTCCCATCTTCCAGGGGCAGAATGAGTCCATACAAGAGAAGATCTCTGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 ENSMUST00000171635.8 ENSMUST00000188386.2 |
||
| CDS CCA 90 bp | CAGTTCCTGGAGGATCTTCTCTTGTTCCTTCTGCCTCTCGGTATTTaGGGTTTTGGAGACTGCCAAACACTTGATTCCAGAATTTGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: QFLEDLLLFLLPLGI*GFGDCQTLDSRIWS Trigger: CGACCAAATTCTGGAATCAAGTGTTTGGCAGTCTCCAAAACCCCAAATACCGAGAGGCAGAAGGAACAAGAGAAGATCCTCCAGGAACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171635.8 ENSMUST00000188386.2 |
||
| CDS-3UTR CAA 90 bp | CTAGACTACCTGACAATAGACAAATGGCTGGGGAGATGCTTAGTGGATAAGAGTCTAAGAGGCTGCATCTaGGCTTCTGTGGAGTCACTC | + |
|
Preference number: 5 (lower is better) Translates to: LDYLTIDKWLGRCLVDKSLRGCI*ASVESL Trigger: GAGTGACTCCACAGAAGCCAAGATGCAGCCTCTTAG...ACTCTTATCCACTAAGCATCTCCCCAGCCATTTGTCTATTGTCAGGTAGTCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
||
| CDS-3UTR CAA 90 bp | GACACAGTCTTCCTCACCGATGTTGTTAGGCTCCCCTCTATTCCAATATTTCTGTCTGCCTCTCGGTATTaGGGGTTTTGGAGACTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: DTVFLTDVVRLPSIPIFLSASRY*GFWRLG Trigger: TCCAAGTCTCCAAAACCCCAAATACCGAGAGGCAGA...CAGAAATATTGGAATAGAGGGGAGCCTAACAACATCGGTGAGGAAGACTGTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111014.8 |
||
| CDS-3UTR CAA 90 bp | CTAGACTACCTGACAATAGACAAATGGCTGGGGAGATGCTTAGTGGATAAGAGTCTGGAGGATCTTCTCTaGTTCCTTCTGCCTCTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: LDYLTIDKWLGRCLVDKSLEDLL*FLLPLG Trigger: ACCGAGAGGCAGAAGGAACAAGAGAAGATCCTCCAG...ACTCTTATCCACTAAGCATCTCCCCAGCCATTTGTCTATTGTCAGGTAGTCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
||
| CDS-3UTR CAA 90 bp | AGAGCCTTTTTCACGATCCTGAGGCCAACAGGCAGGAAGAAGGAGCTGGCACGACAGATCCAGAACTTTTaGAGTTCACATTTAGAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RAFFTILRPTGRKKELARQIQNF*SSHLES Trigger: TGACTCTAAATGTGAACTCAAAAAGTTCTGGATCTG...TCGTGCCAGCTCCTTCTTCCTGCCTGTTGGCCTCAGGATCGTGAAAAAGGCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084086.9 |
||
| CDS-3UTR CAA 90 bp | AGTGAGGCACATCCATGTGCCTGGCAGAATGGCATGAAGGTAGGAGCGGAGATGCAGATCCAGAACTTTTaGAGTTCACATTTAGAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SEAHPCAWQNGMKVGAEMQIQNF*SSHLES Trigger: TGACTCTAAATGTGAACTCAAAAAGTTCTGGATCTG...CATCTCCGCTCCTACCTTCATGCCATTCTGCCAGGCACATGGATGTGCCTCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000171635.8 |
||
| CDS CCA 90 bp | ATCAGTTGCTCAGAGATCTTCTCTTGTATGGACTCATTCTGCCCCTaGAAGATGGGAATCCTGGACAAGAGTTCAGTTTTCAGCTGCATC | + |
|
Preference number: 5 (lower is better) Translates to: ISCSEIFSCMDSFCP*KMGILDKSSVFSCI Trigger: GATGCAGCTGAAAACTGAACTCTTGTCCAGGATTCCCATCTTCCAGGGGCAGAATGAGTCCATACAAGAGAAGATCTCTGAGCAACTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 ENSMUST00000171635.8 ENSMUST00000188386.2 |
||
| CDS-3UTR CAA 90 bp | ATAGACAAATGGCTGGGGAGATGCTTAGTGGATAAGAGTGCTGATGTGCAAGAATCTGCCTCTCGGTATTaGGGGTTTTGGAGACTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: IDKWLGRCLVDKSADVQESASRY*GFWRLG Trigger: TCCAAGTCTCCAAAACCCCAAATACCGAGAGGCAGA...TTCTTGCACATCAGCACTCTTATCCACTAAGCATCTCCCCAGCCATTTGTCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
||
| CDS-3UTR CAA 90 bp | CCAGAGAAACCTGAAAGCAAAAGGACAATAGTGAGTCCCTTTGTGATAGTCAGCCTCAGAGATCTTCTCTaGTATGGACTCATTCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PEKPESKRTIVSPFVIVSLRDLL*YGLILP Trigger: GGGCAGAATGAGTCCATACAAGAGAAGATCTCTGAG...GCTGACTATCACAAAGGGACTCACTATTGTCCTTTTGCTTTCAGGTTTCTCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
||
| CDS-3UTR CAA 90 bp | CAGTCTTCCTCACCGATGTTGTTAGGCTCCCCTCTATTCCAATATTTCTGGAATCTTCAGCTGCATCAGTaGCTCAGAGATCTTCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: QSSSPMLLGSPLFQYFWNLQLHQ*LRDLLL Trigger: CAAGAGAAGATCTCTGAGCAACTGATGCAGCTGAAG...ATTCCAGAAATATTGGAATAGAGGGGAGCCTAACAACATCGGTGAGGAAGACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111014.8 |
||
| CDS-3UTR CAA 90 bp | AATGGAAAACACCCAGATTCTGAAAGCATCCTACATCAGGTAACTGCACTGAAGGGGAAGCTGGAGATCTaGGAAAGAAGTTCAGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: NGKHPDSESILHQVTALKGKLEI*ERSSAF Trigger: GAAGGCTGAACTTCTTTCCAAGATCTCCAGCTTCCC...CTTCAGTGCAGTTACCTGATGTAGGATGCTTTCAGAATCTGGGTGTTTTCCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
||
| CDS-3UTR CAA 90 bp | CAACTCCTGTCTCAAGGGAGTAAAGAGCTATCAAAGAGAACACCAATGTCTTCTGGGAAGCTGGAGATCTaGGAAAGAAGTTCAGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QLLSQGSKELSKRTPMSSGKLEI*ERSSAF Trigger: GAAGGCTGAACTTCTTTCCAAGATCTCCAGCTTCCC...AGAAGACATTGGTGTTCTCTTTGATAGCTCTTTACTCCCTTGAGACAGGAGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
||
| CDS-3UTR CAA 90 bp | CCAGAGAAACCTGAAAGCAAAAGGACAATAGTGAGTCCCTTTGTGATAGTCAGCCATCTGTACCAGCTGTaGGTAGATCTTCTCCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: PEKPESKRTIVSPFVIVSHLYQL*VDLLLL Trigger: AAGCAGGAGAAGATCTACCAACAGCTGGTACAGATG...GCTGACTATCACAAAGGGACTCACTATTGTCCTTTTGCTTTCAGGTTTCTCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
||
| CDS-3UTR CAA 90 bp | GACACAGTCTTCCTCACCGATGTTGTTAGGCTCCCCTCTATTCCAATATTTCTGTCGGTATTTGGGGTTTaGGAGACTTGGAAAAGAATG | + |
|
Preference number: 5 (lower is better) Translates to: DTVFLTDVVRLPSIPIFLSVFGV*ETWKRM Trigger: CATTCTTTTCCAAGTCTCCAAAACCCCAAATACCGA...CAGAAATATTGGAATAGAGGGGAGCCTAACAACATCGGTGAGGAAGACTGTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111014.8 |
||
| CDS-3UTR CAA 90 bp | CAACTCCTGTCTCAAGGGAGTAAAGAGCTATCAAAGAGAACACCAATGTCTTCTCTTCAGCTGCATCAGTaGCTCAGAGATCTTCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: QLLSQGSKELSKRTPMSSLQLHQ*LRDLLL Trigger: CAAGAGAAGATCTCTGAGCAACTGATGCAGCTGAAG...AGAAGACATTGGTGTTCTCTTTGATAGCTCTTTACTCCCTTGAGACAGGAGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
||
| CDS TCA 72 bp | TCCTCTGGAGATGGGGGCATGCCTGGGTCTGCTGGATaGCAGAGTAGAACCATCTACCCAGAGCCACGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SSGDGGMPGSAG*QSRTIYPEPRG Trigger: GCCACGTGGCTCTGGGTAGATGGTTCTACTCTGTCATCCAGCAGACCCAGGCATGCCCCCATCTCCAGAGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000188386.2 |
||
| CDS TCA 72 bp | ATCTACCCAGAGCCACGTGGCCTCCTTCTTCAGGTCTaGCAGGCCCATCCAGGTTGGTCCTTTAGCCTTAGA | + |
|
Preference number: 6 (lower is better) Translates to: IYPEPRGLLLQV*QAHPGWSFSLR Trigger: TCTAAGGCTAAAGGACCAACCTGGATGGGCCTGTCAGACCTGAAGAAGGAGGCCACGTGGCTCTGGGTAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084086.9 ENSMUST00000171635.8 ENSMUST00000188386.2 |
||
| CDS CCA 72 bp | TCCTTCCAGAATGCATATTGTAGATGGGCCTTCCTCTaGAGATGGGGGCATGCCTGGGTCTGCTGGATGACA | + |
|
Preference number: 6 (lower is better) Translates to: SFQNAYCRWAFL*RWGHAWVCWMT Trigger: TGTCATCCAGCAGACCCAGGCATGCCCCCATCTCCAGAGGAAGGCCCATCTACAATATGCATTCTGGAAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000188386.2 |
||
| CDS CAA 90 bp | CATCAGTTGCTCAGTGATCTTCGCCTGCATGGACTCATTCTTCCCTaGGGAGATGGGGATCCTGGACGTAAGCTCATCTGTCAGCTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: HQLLSDLRLHGLILP*GDGDPGRKLICQLG Trigger: ACCCAGCTGACAGATGAGCTTACGTCCAGGATCCCCATCTCCCAAGGGAAGAATGAGTCCATGCAGGCGAAGATCACTGAGCAACTGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 ENSMUST00000171635.8 ENSMUST00000188386.2 |
||
| CDS CCA 72 bp | CTGGACGTAAGCTCATCTGTCAGCTGGGTCAGTTCCTaGAGGATCTTCTCTTGTTCCTTCTGCCTCTCGGTA | + |
|
Preference number: 6 (lower is better) Translates to: LDVSSSVSWVSS*RIFSCSFCLSV Trigger: TACCGAGAGGCAGAAGGAACAAGAGAAGATCCTCCAGGAACTGACCCAGCTGACAGATGAGCTTACGTCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 ENSMUST00000171635.8 ENSMUST00000188386.2 |
||
| CDS CCA 72 bp | GAGATGGGGATCCTGGACGTAAGCTCATCTGTCAGCTaGGTCAGTTCCTGGAGGATCTTCTCTTGTTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: EMGILDVSSSVS*VSSWRIFSCSF Trigger: GAAGGAACAAGAGAAGATCCTCCAGGAACTGACCCAGCTGACAGATGAGCTTACGTCCAGGATCCCCATCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 ENSMUST00000171635.8 ENSMUST00000188386.2 |
||
| CDS CCA 72 bp | TCAGTGATCTTCGCCTGCATGGACTCATTCTTCCCTTaGGAGATGGGGATCCTGGACGTAAGCTCATCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: SVIFACMDSFFP*EMGILDVSSSV Trigger: GACAGATGAGCTTACGTCCAGGATCCCCATCTCCCAAGGGAAGAATGAGTCCATGCAGGCGAAGATCACTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 ENSMUST00000171635.8 ENSMUST00000188386.2 |
||
| CDS CAA 72 bp | CTCAGTGATCTTCGCCTGCATGGACTCATTCTTCCCTaGGGAGATGGGGATCCTGGACGTAAGCTCATCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LSDLRLHGLILP*GDGDPGRKLIC Trigger: ACAGATGAGCTTACGTCCAGGATCCCCATCTCCCAAGGGAAGAATGAGTCCATGCAGGCGAAGATCACTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 ENSMUST00000171635.8 ENSMUST00000188386.2 |
||
| CDS CAA 90 bp | CGTAAGCTCATCTGTCAGCTGGGTCAGTTCCTGGAGGATCTTCTCTaGTTCCTTCTGCCTCTCGGTATTTGGGGTTTTGGAGACTGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: RKLICQLGQFLEDLL*FLLPLGIWGFGDCQ Trigger: TTGGCAGTCTCCAAAACCCCAAATACCGAGAGGCAGAAGGAACAAGAGAAGATCCTCCAGGAACTGACCCAGCTGACAGATGAGCTTACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000171635.8 ENSMUST00000188386.2 |
||
| CDS GCA 72 bp | GTTTTCAGCTGCATCAGTTGCTCAGTGATCTTCGCCTaGATGGACTCATTCTTCCCTTGGGAGATGGGGATC | + |
|
Preference number: 6 (lower is better) Translates to: VFSCISCSVIFA*MDSFFPWEMGI Trigger: GATCCCCATCTCCCAAGGGAAGAATGAGTCCATGCAGGCGAAGATCACTGAGCAACTGATGCAGCTGAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 ENSMUST00000171635.8 ENSMUST00000188386.2 |
||
| CDS CCA 72 bp | ATTTCTGGAATCTCCTTCCAGAATGCATATTGTAGATaGGCCTTCCTCTGGAGATGGGGGCATGCCTGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: ISGISFQNAYCR*AFLWRWGHAWV Trigger: GACCCAGGCATGCCCCCATCTCCAGAGGAAGGCCCATCTACAATATGCATTCTGGAAGGAGATTCCAGAAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000188386.2 |
||
| CDS CAA 90 bp | CGTAAGCTCATCTGTCAGCTGGGTCAGTTCCTGGAGGATCTTCTCTaGTTCCTTCTGCCTCTCGGTATTTGGGGTTTTGGAGACTTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: RKLICQLGQFLEDLL*FLLPLGIWGFGDLE Trigger: TTCCAAGTCTCCAAAACCCCAAATACCGAGAGGCAGAAGGAACAAGAGAAGATCCTCCAGGAACTGACCCAGCTGACAGATGAGCTTACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
||
| CDS GCA 72 bp | TGGGTCAGTTCCTGGAGGATCTTCTCTTGTTCCTTCTaGCTCTCGGTATTTGGGGTTTTGGAGACTGCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: WVSSWRIFSCSF*LSVFGVLETAK Trigger: TTTGGCAGTCTCCAAAACCCCAAATACCGAGAGGCAGAAGGAACAAGAGAAGATCCTCCAGGAACTGACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000171635.8 ENSMUST00000188386.2 |
||
| CDS CCA 72 bp | TCAGCTGCATCAGTTGCTCAGAGATCTTCTCTTGTATaGACTCATTCTGCCCCTGGAAGATGGGAATCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SAASVAQRSSLV*THSAPGRWESW Trigger: CCAGGATTCCCATCTTCCAGGGGCAGAATGAGTCCATACAAGAGAAGATCTCTGAGCAACTGATGCAGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 ENSMUST00000171635.8 ENSMUST00000188386.2 |
||
| CDS CAA 90 bp | GAAGATGGGAATCCTGGACAAGAGTTCAGTTTTCAGCTGCATCAGTaGCTCAGTGATCTTCGCCTGCATGGACTCATTCTTCCCTTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: EDGNPGQEFSFQLHQ*LSDLRLHGLILPLG Trigger: TCCCAAGGGAAGAATGAGTCCATGCAGGCGAAGATCACTGAGCAACTGATGCAGCTGAAAACTGAACTCTTGTCCAGGATTCCCATCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 ENSMUST00000171635.8 ENSMUST00000188386.2 |
||
| CDS TCA 72 bp | ACAAGAGTTCAGTTTTCAGCTGCATCAGTTGCTCAGTaGTCTTCGCCTGCATGGACTCATTCTTCCCTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: TRVQFSAASVAQ*SSPAWTHSSLG Trigger: CCCAAGGGAAGAATGAGTCCATGCAGGCGAAGATCACTGAGCAACTGATGCAGCTGAAAACTGAACTCTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 ENSMUST00000171635.8 ENSMUST00000188386.2 |
||
| CDS GCA 72 bp | TGGGTCAGTTCCTGGAGGATCTTCTCTTGTTCCTTCTaGCTCTCGGTATTTGGGGTTTTGGAGACTTGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: WVSSWRIFSCSF*LSVFGVLETWK Trigger: TTTCCAAGTCTCCAAAACCCCAAATACCGAGAGGCAGAAGGAACAAGAGAAGATCCTCCAGGAACTGACCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 |
||
| CDS GCA 72 bp | CCCATCCAGGTTGGTCCTTTAGCCTTAGAAGTCTGCTaGAGGAAGGTCTGCTCTTCATCACTATTGATGATG | + |
|
Preference number: 6 (lower is better) Translates to: PIQVGPLALEVC*RKVCSSSLLMM Trigger: CATCATCAATAGTGATGAAGAGCAGACCTTCCTGCAGCAGACTTCTAAGGCTAAAGGACCAACCTGGATGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084086.9 ENSMUST00000171635.8 ENSMUST00000188386.2 |
||
| CDS CCA 72 bp | GTATGGACTCATTCTGCCCCTGGAAGATGGGAATCCTaGACAAGAGTTCAGTTTTCAGCTGCATCAGTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: VWTHSAPGRWES*TRVQFSAASVA Trigger: AGCAACTGATGCAGCTGAAAACTGAACTCTTGTCCAGGATTCCCATCTTCCAGGGGCAGAATGAGTCCATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 ENSMUST00000171635.8 ENSMUST00000188386.2 |
||
| CDS CAA 72 bp | AGCCTTCAGCTGCATCAGTTGCTCAGAGATCTTCTCTaGTATGGACTCATTCTGCCCCTGGAAGATGGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: SLQLHQLLRDLL*YGLILPLEDGN Trigger: ATTCCCATCTTCCAGGGGCAGAATGAGTCCATACAAGAGAAGATCTCTGAGCAACTGATGCAGCTGAAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 ENSMUST00000171635.8 ENSMUST00000188386.2 |
||
| CDS CAA 90 bp | AAGAAGTTCAGCCTTCAGCTGCATCAGTTGCTCAGAGATCTTCTCTaGTATGGACTCATTCTGCCCCTGGAAGATGGGAATCCTGGACAA | + |
|
Preference number: 6 (lower is better) Translates to: KKFSLQLHQLLRDLL*YGLILPLEDGNPGQ Trigger: TTGTCCAGGATTCCCATCTTCCAGGGGCAGAATGAGTCCATACAAGAGAAGATCTCTGAGCAACTGATGCAGCTGAAGGCTGAACTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 ENSMUST00000171635.8 ENSMUST00000188386.2 |
||
| CDS CAA 90 bp | GAAGCTGGAGATCTTGGAAAGAAGTTCAGCCTTCAGCTGCATCAGTaGCTCAGAGATCTTCTCTTGTATGGACTCATTCTGCCCCTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: EAGDLGKKFSLQLHQ*LRDLLLYGLILPLE Trigger: TTCCAGGGGCAGAATGAGTCCATACAAGAGAAGATCTCTGAGCAACTGATGCAGCTGAAGGCTGAACTTCTTTCCAAGATCTCCAGCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 ENSMUST00000171635.8 ENSMUST00000188386.2 |
||
| CDS CAA 90 bp | TTCCAGCCATCCCCAGCAAATTCGACACAGTCTTCCTCACCGATGTaGTTAGGCTCCCCTCTATTCCAATATTTCTGGAATCTCCTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: FQPSPANSTQSSSPM*LGSPLFQYFWNLLP Trigger: TGGAAGGAGATTCCAGAAATATTGGAATAGAGGGGAGCCTAACAACATCGGTGAGGAAGACTGTGTCGAATTTGCTGGGGATGGCTGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188386.2 |
||
| CDS CAA 90 bp | TGGAGGATCTTCTCTTGTTCCTTCTGCCTCTCGGTATTTGGGGTTTaGGAGACTGCCAAACACTTGATTCCAGAATTTGGTCGTAGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: WRIFSCSFCLSVFGV*ETAKHLIPEFGRSL Trigger: CAGACTACGACCAAATTCTGGAATCAAGTGTTTGGCAGTCTCCAAAACCCCAAATACCGAGAGGCAGAAGGAACAAGAGAAGATCCTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171635.8 ENSMUST00000188386.2 |
||
| CDS GCA 72 bp | AGTTGCTCAGAGATCTTCTCTTGTATGGACTCATTCTaGCCCTGGAAGATGGGAATCCTGGACAAGAGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SCSEIFSCMDSF*PWKMGILDKSS Trigger: TGAACTCTTGTCCAGGATTCCCATCTTCCAGGGGCAGAATGAGTCCATACAAGAGAAGATCTCTGAGCAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 ENSMUST00000171635.8 ENSMUST00000188386.2 |
||
| CDS CCA 72 bp | TCTTCTCTTGTATGGACTCATTCTGCCCCTGGAAGATaGGAATCCTGGACAAGAGTTCAGTTTTCAGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: SSLVWTHSAPGR*ESWTRVQFSAA Trigger: TGCAGCTGAAAACTGAACTCTTGTCCAGGATTCCCATCTTCCAGGGGCAGAATGAGTCCATACAAGAGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 ENSMUST00000171635.8 ENSMUST00000188386.2 |
||
| CDS TCA 72 bp | AAGGTCTGCTCTTCATCACTATTGATGATGACTAGTTaGGCCTTCACTTCTTTGCAAGCTGTGACGGCGTCA | + |
|
Preference number: 6 (lower is better) Translates to: KVCSSSLLMMTS*AFTSLQAVTAS Trigger: TGACGCCGTCACAGCTTGCAAAGAAGTGAAGGCTCAACTAGTCATCATCAATAGTGATGAAGAGCAGACCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084086.9 ENSMUST00000171635.8 ENSMUST00000188386.2 |
||
| CDS CCA 72 bp | TCAGAGATCTTCTCTTGTATGGACTCATTCTGCCCCTaGAAGATGGGAATCCTGGACAAGAGTTCAGTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SEIFSCMDSFCP*KMGILDKSSVF Trigger: GAAAACTGAACTCTTGTCCAGGATTCCCATCTTCCAGGGGCAGAATGAGTCCATACAAGAGAAGATCTCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 ENSMUST00000171635.8 ENSMUST00000188386.2 |
||
| CDS CAA 72 bp | CAGGCGGAAGAGTTCAGTCTTCATCTGTACCAGCTGTaGGTAGATCTTCTCCTGCTTAGAATCATCCTTTAC | + |
|
Preference number: 6 (lower is better) Translates to: QAEEFSLHLYQL*VDLLLLRIILY Trigger: GTAAAGGATGATTCTAAGCAGGAGAAGATCTACCAACAGCTGGTACAGATGAAGACTGAACTCTTCCGCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084086.9 ENSMUST00000171635.8 ENSMUST00000188386.2 |
||
| CDS GCA 72 bp | ATCTTGGAAAGAAGTTCAGCCTTCAGCTGCATCAGTTaGTCAGAGATCTTCTCTTGTATGGACTCATTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ILERSSAFSCIS*SEIFSCMDSFC Trigger: GCAGAATGAGTCCATACAAGAGAAGATCTCTGAGCAACTGATGCAGCTGAAGGCTGAACTTCTTTCCAAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 ENSMUST00000171635.8 ENSMUST00000188386.2 |
||
| CDS CAA 72 bp | GATCTTGGAAAGAAGTTCAGCCTTCAGCTGCATCAGTaGCTCAGAGATCTTCTCTTGTATGGACTCATTCTG | + |
|
Preference number: 6 (lower is better) Translates to: DLGKKFSLQLHQ*LRDLLLYGLIL Trigger: CAGAATGAGTCCATACAAGAGAAGATCTCTGAGCAACTGATGCAGCTGAAGGCTGAACTTCTTTCCAAGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084086.9 ENSMUST00000111014.8 ENSMUST00000171635.8 ENSMUST00000188386.2 |
||
| CDS CAA 72 bp | AGGAAGGTAGAGTTCAGTCTTCATCTGTACCAGCTGTaGGTAGATCTTCTCCTGCTTAGAATCATCCTTTAC | + |
|
Preference number: 6 (lower is better) Translates to: RKVEFSLHLYQL*VDLLLLRIILY Trigger: GTAAAGGATGATTCTAAGCAGGAGAAGATCTACCAACAGCTGGTACAGATGAAGACTGAACTCTACCTTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111014.8 |
||