Pregenerated sensors for CD200 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022661Ensembl transcript IDs: ENSMUST00000023341.15, ENSMUST00000163230.8, ENSMUST00000166512.2, ENSMUST00000167355.8
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACCCGAGGCACTCGACTTCCTCTTGGAATGCAAACACCGAGGACCTaGGACAACAGCAAAAAGTCAAATCCCTCACAGGCTCGTGTCTGG | + |
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Preference number: 1 (lower is better) Translates to: TRGTRLPLGMQTPRT*DNSKKSNPSQARVW Trigger: CCAGACACGAGCCTGTGAGGGATTTGACTTTTTGCTGTTGTCCCAGGTCCTCGGTGTTTGCATTCCAAGAGGAAGTCGAGTGCCTCGGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| 3UTR CCA 90 bp | ACTACGATTTGTTCCTCCGATGGGAGCCCTAGTCGGTCTGAGAGCTaGCTTGGCACTGGTGGTTCTAAGTCTGGAGCCTTTCTAACAGCA | + |
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Preference number: 1 (lower is better) Translates to: TTICSSDGSPSRSES*LGTGGSKSGAFLTA Trigger: TGCTGTTAGAAAGGCTCCAGACTTAGAACCACCAGTGCCAAGCCAGCTCTCAGACCGACTAGGGCTCCCATCGGAGGAACAAATCGTAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| 3UTR TCA 90 bp | ACCCGGAGGATGCTGGTGACAGATGTAGTCCCATTTGAATGGAAGTaGCTCTCGGTACTATTCTCAATTCCTGTCCCAGTACCCTTCCAG | + |
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Preference number: 1 (lower is better) Translates to: TRRMLVTDVVPFEWK*LSVLFSIPVPVPFQ Trigger: CTGGAAGGGTACTGGGACAGGAATTGAGAATAGTACCGAGAGTCACTTCCATTCAAATGGGACTACATCTGTCACCAGCATCCTCCGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166512.2 ENSMUST00000167355.8 |
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| 3UTR TCA 90 bp | GGGGTCTTTGACCCGGAGGATGCTGGTGACAGATGTAGTCCCATTTaGATGGAAGTGACTCTCGGTACTATTCTCAATTCCTGTCCCAGT | + |
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Preference number: 1 (lower is better) Translates to: GVFDPEDAGDRCSPI*MEVTLGTILNSCPS Trigger: ACTGGGACAGGAATTGAGAATAGTACCGAGAGTCACTTCCATTCAAATGGGACTACATCTGTCACCAGCATCCTCCGGGTCAAAGACCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166512.2 ENSMUST00000167355.8 |
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| 3UTR GCA 90 bp | ATCAAGTCCTACAACAGACCCGAGGCACTCGACTTCCTCTTGGAATaGAAACACCGAGGACCTGGGACAACAGCAAAAAGTCAAATCCCT | + |
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Preference number: 1 (lower is better) Translates to: IKSYNRPEALDFLLE*KHRGPGTTAKSQIP Trigger: AGGGATTTGACTTTTTGCTGTTGTCCCAGGTCCTCGGTGTTTGCATTCCAAGAGGAAGTCGAGTGCCTCGGGTCTGTTGTAGGACTTGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| 3UTR CCA 90 bp | ACAGGATTCAGAATGGCCTCAAAGAGAGTGTTATTGTGGGCCCAATaGATAGGGAGAGCATGCTTTTGTAAAGATGTGAACTACTCACTA | + |
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Preference number: 1 (lower is better) Translates to: TGFRMASKRVLLWAQ*IGRACFCKDVNYSL Trigger: TAGTGAGTAGTTCACATCTTTACAAAAGCATGCTCTCCCTATCCATTGGGCCCACAATAACACTCTCTTTGAGGCCATTCTGAATCCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| 3UTR GCA 90 bp | GCCTCAAAGAGAGTGTTATTGTGGGCCCAATGGATAGGGAGAGCATaGTTTTGTAAAGATGTGAACTACTCACTAAGACTAACAATATTG | + |
|
Preference number: 1 (lower is better) Translates to: ASKRVLLWAQWIGRA*FCKDVNYSLRLTIL Trigger: CAATATTGTTAGTCTTAGTGAGTAGTTCACATCTTTACAAAAGCATGCTCTCCCTATCCATTGGGCCCACAATAACACTCTCTTTGAGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| 3UTR CCA 90 bp | TTTCTTCCTAAAAATTCCATCAGATTTCAGACATGGCCAATTTTCTaGTCCCACTCCTTTCTACTTTGTGTAAGGACCAGAGAGCTCTGT | + |
|
Preference number: 1 (lower is better) Translates to: FLPKNSIRFQTWPIF*SHSFLLCVRTRELC Trigger: ACAGAGCTCTCTGGTCCTTACACAAAGTAGAAAGGAGTGGGACCAGAAAATTGGCCATGTCTGAAATCTGATGGAATTTTTAGGAAGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| 3UTR GCA 90 bp | ATAGTAAGATGGAGATCAAGATCAGAAGAATTACCAGAGAAACAATaGTTAGCAACAGTGGAACTGAAAACCAAAATCCTTTGTCCAGAC | + |
|
Preference number: 1 (lower is better) Translates to: IVRWRSRSEELPEKQ*LATVELKTKILCPD Trigger: GTCTGGACAAAGGATTTTGGTTTTCAGTTCCACTGTTGCTAAGCATTGTTTCTCTGGTAATTCTTCTGATCTTGATCTCCATCTTACTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166512.2 ENSMUST00000167355.8 |
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| 3UTR-3UTR CCA 90 bp | CGGTCTGAGAGCTGGCTTGGCACTGGTGGTTCTAAGTCTGGAGCCTTTCTAACAAGGTCCTATGGAGAATaGCCTTTTCCCTCCTGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: RSESWLGTGGSKSGAFLTRSYGE*PFPSCF Trigger: AAAGCAGGAGGGAAAAGGCCATTCTCCATAGGACCT...TGTTAGAAAGGCTCCAGACTTAGAACCACCAGTGCCAAGCCAGCTCTCAGACCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTACAACAGACCCGAGGCACTCGACTTCCTCTTGGAATGCAAACACCGAGGAAGGTCCTATGGAGAATaGCCTTTTCCCTCCTGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: SYNRPEALDFLLECKHRGRSYGE*PFPSCF Trigger: AAAGCAGGAGGGAAAAGGCCATTCTCCATAGGACCT...TCCTCGGTGTTTGCATTCCAAGAGGAAGTCGAGTGCCTCGGGTCTGTTGTAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| 3UTR CAA 90 bp | ACAACAGCAAAAAGTCAAATCCCTCACAGGCTCGTGTCTGGTCTTTaGCTCTCCTTAGGTCCTATGGAGAATGGCCTTTTCCCTCCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: TTAKSQIPHRLVSGL*LSLGPMENGLFPPA Trigger: AGCAGGAGGGAAAAGGCCATTCTCCATAGGACCTAAGGAGAGCAAAAGACCAGACACGAGCCTGTGAGGGATTTGACTTTTTGCTGTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| 3UTR-3UTR GCA 90 bp | GGAAACACACTGGCGGACCTAAGAACAAAACCAGAGCTGGGACACCAACAGAAATGGCCTTTTCCCTCCTaGTTTTCTTTCACATCAGAT | + |
|
Preference number: 2 (lower is better) Translates to: GNTLADLRTKPELGHQQKWPFPS*FSFTSD Trigger: ATCTGATGTGAAAGAAAAGCAGGAGGGAAAAGGCCA...TTTCTGTTGGTGTCCCAGCTCTGGTTTTGTTCTTAGGTCCGCCAGTGTGTTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| 3UTR-3UTR CCA 90 bp | GGAAACACACTGGCGGACCTAAGAACAAAACCAGAGCTGGGACACCAACAGAAAATCAGATTTCAGACATaGCCAATTTTCTGGTCCCAC | + |
|
Preference number: 2 (lower is better) Translates to: GNTLADLRTKPELGHQQKIRFQT*PIFWSH Trigger: GTGGGACCAGAAAATTGGCCATGTCTGAAATCTGAT...TTTCTGTTGGTGTCCCAGCTCTGGTTTTGTTCTTAGGTCCGCCAGTGTGTTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| 3UTR-3UTR GCA 90 bp | TCCCCTGTGATGATTCACCCCGCTCCTGATTTCGGTGACGTTTCCAGTATAGTATTACCAGAGAAACAATaGTTAGCAACAGTGGAACTG | + |
|
Preference number: 2 (lower is better) Translates to: SPVMIHPAPDFGDVSSIVLPEKQ*LATVEL Trigger: CAGTTCCACTGTTGCTAAGCATTGTTTCTCTGGTAA...TACTATACTGGAAACGTCACCGAAATCAGGAGCGGGGTGAATCATCACAGGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166512.2 ENSMUST00000167355.8 |
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| 3UTR CAA 90 bp | TCATTACACGAGACAGGATTCAGAATGGCCTCAAAGAGAGTGTTATaGTGGGCCCAATGGATAGGGAGAGCATGCTTTTGTAAAGATGTG | + |
|
Preference number: 2 (lower is better) Translates to: SLHETGFRMASKRVL*WAQWIGRACFCKDV Trigger: CACATCTTTACAAAAGCATGCTCTCCCTATCCATTGGGCCCACAATAACACTCTCTTTGAGGCCATTCTGAATCCTGTCTCGTGTAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| 3UTR-3UTR CCA 90 bp | GCCCAATGGATAGGGAGAGCATGCTTTTGTAAAGATGTGAACTACTCACTAAGAATCAGATTTCAGACATaGCCAATTTTCTGGTCCCAC | + |
|
Preference number: 2 (lower is better) Translates to: AQWIGRACFCKDVNYSLRIRFQT*PIFWSH Trigger: GTGGGACCAGAAAATTGGCCATGTCTGAAATCTGAT...TCTTAGTGAGTAGTTCACATCTTTACAAAAGCATGCTCTCCCTATCCATTGGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| 3UTR-3UTR CCA 90 bp | CAGTATAGTAAGATGGAGATCAAGATCAGAAGAATTACCAGAGAAACAATGCTTCCCAGGTATAAAACCTaGCAGATCACTTCCTTCCCA | + |
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Preference number: 2 (lower is better) Translates to: QYSKMEIKIRRITRETMLPRYKT*QITSFP Trigger: TGGGAAGGAAGTGATCTGCCAGGTTTTATACCTGGG...AAGCATTGTTTCTCTGGTAATTCTTCTGATCTTGATCTCCATCTTACTATACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166512.2 ENSMUST00000167355.8 |
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| 3UTR-3UTR GCA 90 bp | GGGTTAAGAATTAATAGTTCACGATGTCTTCAGAACAAAGCGATTGTATTCAGGTGGCCTTTTCCCTCCTaGTTTTCTTTCACATCAGAT | + |
|
Preference number: 2 (lower is better) Translates to: GLRINSSRCLQNKAIVFRWPFPS*FSFTSD Trigger: ATCTGATGTGAAAGAAAAGCAGGAGGGAAAAGGCCA...CCTGAATACAATCGCTTTGTTCTGAAGACATCGTGAACTATTAATTCTTAACCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| 3UTR-3UTR TCA 90 bp | GGGTTAAGAATTAATAGTTCACGATGTCTTCAGAACAAAGCGATTGTATTCAGGGAGAGAATAAACAACTaGCTGCTGTACAGGAAATTC | + |
|
Preference number: 2 (lower is better) Translates to: GLRINSSRCLQNKAIVFRERINN*LLYRKF Trigger: GAATTTCCTGTACAGCAGTCAGTTGTTTATTCTCTC...CCTGAATACAATCGCTTTGTTCTGAAGACATCGTGAACTATTAATTCTTAACCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| 3UTR CCA 72 bp | TGTTCCTCCGATGGGAGCCCTAGTCGGTCTGAGAGCTaGCTTGGCACTGGTGGTTCTAAGTCTGGAGCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: CSSDGSPSRSES*LGTGGSKSGAF Trigger: AAAGGCTCCAGACTTAGAACCACCAGTGCCAAGCCAGCTCTCAGACCGACTAGGGCTCCCATCGGAGGAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| 3UTR CCA 72 bp | AGTCCTACAACAGACCCGAGGCACTCGACTTCCTCTTaGAATGCAAACACCGAGGACCTGGGACAACAGCAA | + |
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Preference number: 3 (lower is better) Translates to: SPTTDPRHSTSS*NANTEDLGQQQ Trigger: TTGCTGTTGTCCCAGGTCCTCGGTGTTTGCATTCCAAGAGGAAGTCGAGTGCCTCGGGTCTGTTGTAGGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| 3UTR GCA 72 bp | TACAACAGACCCGAGGCACTCGACTTCCTCTTGGAATaGAAACACCGAGGACCTGGGACAACAGCAAAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: YNRPEALDFLLE*KHRGPGTTAKS Trigger: ACTTTTTGCTGTTGTCCCAGGTCCTCGGTGTTTGCATTCCAAGAGGAAGTCGAGTGCCTCGGGTCTGTTGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| 3UTR CCA 72 bp | ACTCGACTTCCTCTTGGAATGCAAACACCGAGGACCTaGGACAACAGCAAAAAGTCAAATCCCTCACAGGCT | + |
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Preference number: 3 (lower is better) Translates to: TRLPLGMQTPRT*DNSKKSNPSQA Trigger: AGCCTGTGAGGGATTTGACTTTTTGCTGTTGTCCCAGGTCCTCGGTGTTTGCATTCCAAGAGGAAGTCGAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| 3UTR TCA 72 bp | GACCCGGAGGATGCTGGTGACAGATGTAGTCCCATTTaGATGGAAGTGACTCTCGGTACTATTCTCAATTCC | + |
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Preference number: 3 (lower is better) Translates to: DPEDAGDRCSPI*MEVTLGTILNS Trigger: GGAATTGAGAATAGTACCGAGAGTCACTTCCATTCAAATGGGACTACATCTGTCACCAGCATCCTCCGGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166512.2 ENSMUST00000167355.8 |
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| 3UTR-3UTR CAA 90 bp | AAAGGTACTCTCAGAAGCTCTTTGGACCCTTCTGTGTTCTTTCTTCTTTTGCTTGGTCTGAGAGCTGGCTaGGCACTGGTGGTTCTAAGT | + |
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Preference number: 3 (lower is better) Translates to: KGTLRSSLDPSVFFLLLLGLRAG*ALVVLS Trigger: ACTTAGAACCACCAGTGCCAAGCCAGCTCTCAGACC...AAGCAAAAGAAGAAAGAACACAGAAGGGTCCAAAGAGCTTCTGAGAGTACCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| 3UTR-3UTR CAA 90 bp | AAAATTCCATCAGATTTCAGACATGGCCAATTTTCTGGTCCCACTCCTTTCTACGGTCTGAGAGCTGGCTaGGCACTGGTGGTTCTAAGT | + |
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Preference number: 3 (lower is better) Translates to: KIPSDFRHGQFSGPTPFYGLRAG*ALVVLS Trigger: ACTTAGAACCACCAGTGCCAAGCCAGCTCTCAGACC...GTAGAAAGGAGTGGGACCAGAAAATTGGCCATGTCTGAAATCTGATGGAATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| 3UTR CCA 72 bp | AGAATGGCCTCAAAGAGAGTGTTATTGTGGGCCCAATaGATAGGGAGAGCATGCTTTTGTAAAGATGTGAAC | + |
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Preference number: 3 (lower is better) Translates to: RMASKRVLLWAQ*IGRACFCKDVN Trigger: GTTCACATCTTTACAAAAGCATGCTCTCCCTATCCATTGGGCCCACAATAACACTCTCTTTGAGGCCATTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| 3UTR CCA 72 bp | AAAAATTCCATCAGATTTCAGACATGGCCAATTTTCTaGTCCCACTCCTTTCTACTTTGTGTAAGGACCAGA | + |
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Preference number: 3 (lower is better) Translates to: KNSIRFQTWPIF*SHSFLLCVRTR Trigger: TCTGGTCCTTACACAAAGTAGAAAGGAGTGGGACCAGAAAATTGGCCATGTCTGAAATCTGATGGAATTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| CDS-3UTR GCA 90 bp | TCCTACAACAGACCCGAGGCACTCGACTTCCTCTTGGAATGCAAACACCGAGGAGCGCTACTGCTGCCATaGCCCAAATCAGGCTGTAGG | + |
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Preference number: 4 (lower is better) Translates to: SYNRPEALDFLLECKHRGALLLP*PKSGCR Trigger: CCTACAGCCTGATTTGGGGCATGGCAGCAGTAGCGC...TCCTCGGTGTTTGCATTCCAAGAGGAAGTCGAGTGCCTCGGGTCTGTTGTAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| CDS-3UTR TCA 90 bp | CGGTCTGAGAGCTGGCTTGGCACTGGTGGTTCTAAGTCTGGAGCCTTTCTAACACCAGAAGGTGATGCTTaGGTTCCAGAGTCCCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: RSESWLGTGGSKSGAFLTPEGDA*VPESQL Trigger: GAGCTGGGACTCTGGAACTCAAGCATCACCTTCTGG...TGTTAGAAAGGCTCCAGACTTAGAACCACCAGTGCCAAGCCAGCTCTCAGACCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| CDS-3UTR GCA 90 bp | TTGGGGTCTTTGACCCGGAGGATGCTGGTGACAGATGTAGTCCCATTTGAATGGGCGCTACTGCTGCCATaGCCCAAATCAGGCTGTAGG | + |
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Preference number: 4 (lower is better) Translates to: LGSLTRRMLVTDVVPFEWALLLP*PKSGCR Trigger: CCTACAGCCTGATTTGGGGCATGGCAGCAGTAGCGC...CCATTCAAATGGGACTACATCTGTCACCAGCATCCTCCGGGTCAAAGACCCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166512.2 |
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| 3UTR CAA 72 bp | AAGTCCTACAACAGACCCGAGGCACTCGACTTCCTCTaGGAATGCAAACACCGAGGACCTGGGACAACAGCA | + |
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Preference number: 4 (lower is better) Translates to: KSYNRPEALDFL*ECKHRGPGTTA Trigger: TGCTGTTGTCCCAGGTCCTCGGTGTTTGCATTCCAAGAGGAAGTCGAGTGCCTCGGGTCTGTTGTAGGACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| CDS-3UTR TCA 90 bp | TCCCCTGTGATGATTCACCCCGCTCCTGATTTCGGTGACGTTTCCAGTATAGTAGTCACCACTTCCACTTaGGCTGTGCTCAGCGCTACT | + |
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Preference number: 4 (lower is better) Translates to: SPVMIHPAPDFGDVSSIVVTTST*AVLSAT Trigger: AGTAGCGCTGAGCACAGCTCAAGTGGAAGTGGTGAC...TACTATACTGGAAACGTCACCGAAATCAGGAGCGGGGTGAATCATCACAGGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166512.2 ENSMUST00000167355.8 |
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| CDS-3UTR TCA 90 bp | TCCCCTGTGATGATTCACCCCGCTCCTGATTTCGGTGACGTTTCCAGTATAGTACCAGAAGGTGATGCTTaGGTTCCAGAGTCCCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: SPVMIHPAPDFGDVSSIVPEGDA*VPESQL Trigger: GAGCTGGGACTCTGGAACTCAAGCATCACCTTCTGG...TACTATACTGGAAACGTCACCGAAATCAGGAGCGGGGTGAATCATCACAGGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166512.2 ENSMUST00000167355.8 |
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| CDS-3UTR CCA 90 bp | TCCTACAACAGACCCGAGGCACTCGACTTCCTCTTGGAATGCAAACACCGAGGACCCAGGTATAAAACCTaGCAGATCACTTCCTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: SYNRPEALDFLLECKHRGPRYKT*QITSFP Trigger: TGGGAAGGAAGTGATCTGCCAGGTTTTATACCTGGG...TCCTCGGTGTTTGCATTCCAAGAGGAAGTCGAGTGCCTCGGGTCTGTTGTAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| CDS-3UTR TCA 90 bp | CAGGGAAACACACTGGCGGACCTAAGAACAAAACCAGAGCTGGGACACCAACAGAGAGTCCCAGCTCTGTaGCATTTATCCTGTCTTTGT | + |
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Preference number: 4 (lower is better) Translates to: QGNTLADLRTKPELGHQQRVPAL*HLSCLC Trigger: ACAAAGACAGGATAAATGTCACAGAGCTGGGACTCT...CTGTTGGTGTCCCAGCTCTGGTTTTGTTCTTAGGTCCGCCAGTGTGTTTCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| CDS-3UTR TCA 90 bp | AGTCAATCACATTCCCCAGGTATAAAACCTGGCAGATCACTTCCTTCCCAACTTGTCACCACTTCCACTTaGGCTGTGCTCAGCGCTACT | + |
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Preference number: 4 (lower is better) Translates to: SQSHSPGIKPGRSLPSQLVTTST*AVLSAT Trigger: AGTAGCGCTGAGCACAGCTCAAGTGGAAGTGGTGAC...AAGTTGGGAAGGAAGTGATCTGCCAGGTTTTATACCTGGGGAATGTGATTGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166512.2 ENSMUST00000167355.8 |
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| CDS-3UTR TCA 90 bp | TGCTTTTCTTTCACATCAGATTCAAGTAGACCAGGGAAACACGTTCAGGGTTCTGTCACCACTTCCACTTaGGCTGTGCTCAGCGCTACT | + |
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Preference number: 4 (lower is better) Translates to: CFSFTSDSSRPGKHVQGSVTTST*AVLSAT Trigger: AGTAGCGCTGAGCACAGCTCAAGTGGAAGTGGTGAC...AGAACCCTGAACGTGTTTCCCTGGTCTACTTGAATCTGATGTGAAAGAAAAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| CDS-3UTR GCA 90 bp | TGCTTTTCTTTCACATCAGATTCAAGTAGACCAGGGAAACACGTTCAGGGTTCTCTTCCACTTGAGCTGTaGTCAGCGCTACTGCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: CFSFTSDSSRPGKHVQGSLPLEL*SALLLP Trigger: TGGCAGCAGTAGCGCTGAGCACAGCTCAAGTGGAAG...AGAACCCTGAACGTGTTTCCCTGGTCTACTTGAATCTGATGTGAAAGAAAAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| CDS-3UTR GCA 90 bp | AGAAAGGCAAAAGGTACTCTCAGAAGCTCTTTGGACCCTTCTGTGTTCTTTCTTCTTCCACTTGAGCTGTaGTCAGCGCTACTGCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: RKAKGTLRSSLDPSVFFLLPLEL*SALLLP Trigger: TGGCAGCAGTAGCGCTGAGCACAGCTCAAGTGGAAG...AAGAAAGAACACAGAAGGGTCCAAAGAGCTTCTGAGAGTACCTTTTGCCTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| CDS-3UTR TCA 90 bp | CCTGCTTTTCTTTCACATCAGATTCAAGTAGACCAGGGAAACACGTTCAGGGTTGGGTTTTGCTGTAGGTaGCCATGTTTTCTGGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PAFLSHQIQVDQGNTFRVGFCCR*PCFLGS Trigger: TGAGCCCAGAAAACATGGTCACCTACAGCAAAACCC...AACCCTGAACGTGTTTCCCTGGTCTACTTGAATCTGATGTGAAAGAAAAGCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| CDS-3UTR GCA 90 bp | TTCTTCCTAAAAATTCCATCAGATTTCAGACATGGCCAATTTTCTGGTCCCACTGCGCTACTGCTGCCATaGCCCAAATCAGGCTGTAGG | + |
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Preference number: 4 (lower is better) Translates to: FFLKIPSDFRHGQFSGPTALLLP*PKSGCR Trigger: CCTACAGCCTGATTTGGGGCATGGCAGCAGTAGCGC...AGTGGGACCAGAAAATTGGCCATGTCTGAAATCTGATGGAATTTTTAGGAAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| 3UTR CAA 72 bp | AAAAGTCAAATCCCTCACAGGCTCGTGTCTGGTCTTTaGCTCTCCTTAGGTCCTATGGAGAATGGCCTTTTC | + |
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Preference number: 4 (lower is better) Translates to: KSQIPHRLVSGL*LSLGPMENGLF Trigger: GAAAAGGCCATTCTCCATAGGACCTAAGGAGAGCAAAAGACCAGACACGAGCCTGTGAGGGATTTGACTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| CDS-3UTR TCA 90 bp | TTCTTCCTAAAAATTCCATCAGATTTCAGACATGGCCAATTTTCTGGTCCCACTCCAGAAGGTGATGCTTaGGTTCCAGAGTCCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FFLKIPSDFRHGQFSGPTPEGDA*VPESQL Trigger: GAGCTGGGACTCTGGAACTCAAGCATCACCTTCTGG...AGTGGGACCAGAAAATTGGCCATGTCTGAAATCTGATGGAATTTTTAGGAAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| CDS-3UTR TCA 90 bp | TCCTGCTTTTCTTTCACATCAGATTCAAGTAGACCAGGGAAACACGTTCAGGGTACTTCCTTCCCAACTTaGGTTTTGGGGTCTTTGACC | + |
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Preference number: 4 (lower is better) Translates to: SCFSFTSDSSRPGKHVQGTSFPT*VLGSLT Trigger: GGTCAAAGACCCCAAAACTCAAGTTGGGAAGGAAGT...ACCCTGAACGTGTTTCCCTGGTCTACTTGAATCTGATGTGAAAGAAAAGCAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| CDS-3UTR CCA 90 bp | TTGGGGTCTTTGACCCGGAGGATGCTGGTGACAGATGTAGTCCCATTTGAATGGACAATCAAGGGTTCCTaGGATGTTTTTAGAGAACAT | + |
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Preference number: 4 (lower is better) Translates to: LGSLTRRMLVTDVVPFEWTIKGS*DVFREH Trigger: ATGTTCTCTAAAAACATCCCAGGAACCCTTGATTGT...CCATTCAAATGGGACTACATCTGTCACCAGCATCCTCCGGGTCAAAGACCCCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000166512.2 ENSMUST00000167355.8 |
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| CDS-3UTR TCA 90 bp | GGGTTAAGAATTAATAGTTCACGATGTCTTCAGAACAAAGCGATTGTATTCAGGGTCACCACTTCCACTTaGGCTGTGCTCAGCGCTACT | + |
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Preference number: 4 (lower is better) Translates to: GLRINSSRCLQNKAIVFRVTTST*AVLSAT Trigger: AGTAGCGCTGAGCACAGCTCAAGTGGAAGTGGTGAC...CCTGAATACAATCGCTTTGTTCTGAAGACATCGTGAACTATTAATTCTTAACCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| CDS-3UTR TCA 90 bp | TGCTTTTCTTTCACATCAGATTCAAGTAGACCAGGGAAACACGTTCAGGGTTCTCAGTCGCAGAGCAAGTaGTGTTTAGGTGGTCTTCAA | + |
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Preference number: 4 (lower is better) Translates to: CFSFTSDSSRPGKHVQGSQSQSK*CLGGLQ Trigger: TTGAAGACCACCTAAACATCACTTGCTCTGCGACTG...AGAACCCTGAACGTGTTTCCCTGGTCTACTTGAATCTGATGTGAAAGAAAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| CDS-3UTR TCA 90 bp | GCCCAATGGATAGGGAGAGCATGCTTTTGTAAAGATGTGAACTACTCACTAAGACAGTCGCAGAGCAAGTaGTGTTTAGGTGGTCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: AQWIGRACFCKDVNYSLRQSQSK*CLGGLQ Trigger: TTGAAGACCACCTAAACATCACTTGCTCTGCGACTG...TCTTAGTGAGTAGTTCACATCTTTACAAAAGCATGCTCTCCCTATCCATTGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| CDS-3UTR TCA 90 bp | AAAGGCAAAAGGTACTCTCAGAAGCTCTTTGGACCCTTCTGTGTTCTTTCTTCTACTTCCTTCCCAACTTaGGTTTTGGGGTCTTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: KGKRYSQKLFGPFCVLSSTSFPT*VLGSLT Trigger: GGTCAAAGACCCCAAAACTCAAGTTGGGAAGGAAGT...AGAAGAAAGAACACAGAAGGGTCCAAAGAGCTTCTGAGAGTACCTTTTGCCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| CDS-3UTR TCA 90 bp | AAAGGCAAAAGGTACTCTCAGAAGCTCTTTGGACCCTTCTGTGTTCTTTCTTCTAGAGTCCCAGCTCTGTaGCATTTATCCTGTCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KGKRYSQKLFGPFCVLSSRVPAL*HLSCLC Trigger: ACAAAGACAGGATAAATGTCACAGAGCTGGGACTCT...AGAAGAAAGAACACAGAAGGGTCCAAAGAGCTTCTGAGAGTACCTTTTGCCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| CDS-3UTR TCA 90 bp | CAGTATAGTAAGATGGAGATCAAGATCAGAAGAATTACCAGAGAAACAATGCTTCCAGAAGGTGATGCTTaGGTTCCAGAGTCCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QYSKMEIKIRRITRETMLPEGDA*VPESQL Trigger: GAGCTGGGACTCTGGAACTCAAGCATCACCTTCTGG...AAGCATTGTTTCTCTGGTAATTCTTCTGATCTTGATCTCCATCTTACTATACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166512.2 ENSMUST00000167355.8 |
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| CDS-3UTR CCA 90 bp | CACCCCGCTCCTGATTTCGGTGACGTTTCCAGTATAGTAAGATGGAGATCAAGAACAATCAAGGGTTCCTaGGATGTTTTTAGAGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: HPAPDFGDVSSIVRWRSRTIKGS*DVFREH Trigger: ATGTTCTCTAAAAACATCCCAGGAACCCTTGATTGT...TCTTGATCTCCATCTTACTATACTGGAAACGTCACCGAAATCAGGAGCGGGGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000166512.2 ENSMUST00000167355.8 |
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| CDS-3UTR CCA 90 bp | AGAAAGGCAAAAGGTACTCTCAGAAGCTCTTTGGACCCTTCTGTGTTCTTTCTTGGTGACCATGTTTTCTaGGCTCACGGCTTTCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RKAKGTLRSSLDPSVFFLGDHVF*AHGFLF Trigger: AAAAAGAAAGCCGTGAGCCCAGAAAACATGGTCACC...AAGAAAGAACACAGAAGGGTCCAAAGAGCTTCTGAGAGTACCTTTTGCCTTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| CDS-3UTR GCA 90 bp | AGGCAAAAGGTACTCTCAGAAGCTCTTTGGACCCTTCTGTGTTCTTTCTTCTTTTTACCAGAGAAACAATaGTTAGCAACAGTGGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: RQKVLSEALWTLLCSFFFLPEKQ*LATVEL Trigger: CAGTTCCACTGTTGCTAAGCATTGTTTCTCTGGTAA...AAAGAAGAAAGAACACAGAAGGGTCCAAAGAGCTTCTGAGAGTACCTTTTGCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| CDS-3UTR CCA 90 bp | CCATCAGATTTCAGACATGGCCAATTTTCTGGTCCCACTCCTTTCTACTTTGTGACAATCAAGGGTTCCTaGGATGTTTTTAGAGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: PSDFRHGQFSGPTPFYFVTIKGS*DVFREH Trigger: ATGTTCTCTAAAAACATCCCAGGAACCCTTGATTGT...CACAAAGTAGAAAGGAGTGGGACCAGAAAATTGGCCATGTCTGAAATCTGATGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| CDS-3UTR CCA 90 bp | TCCTGCTTTTCTTTCACATCAGATTCAAGTAGACCAGGGAAACACGTTCAGGGTACAATCAAGGGTTCCTaGGATGTTTTTAGAGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: SCFSFTSDSSRPGKHVQGTIKGS*DVFREH Trigger: ATGTTCTCTAAAAACATCCCAGGAACCCTTGATTGT...ACCCTGAACGTGTTTCCCTGGTCTACTTGAATCTGATGTGAAAGAAAAGCAGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| CDS-3UTR CCA 90 bp | GGGTTAAGAATTAATAGTTCACGATGTCTTCAGAACAAAGCGATTGTATTCAGGCCCAGGTATAAAACCTaGCAGATCACTTCCTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GLRINSSRCLQNKAIVFRPRYKT*QITSFP Trigger: TGGGAAGGAAGTGATCTGCCAGGTTTTATACCTGGG...CCTGAATACAATCGCTTTGTTCTGAAGACATCGTGAACTATTAATTCTTAACCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| CDS-3UTR GCA 90 bp | CTTTCACATCAGATTCAAGTAGACCAGGGAAACACGTTCAGGGTTCTGTATAATTTACCAGAGAAACAATaGTTAGCAACAGTGGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: LSHQIQVDQGNTFRVLYNLPEKQ*LATVEL Trigger: CAGTTCCACTGTTGCTAAGCATTGTTTCTCTGGTAA...ATTATACAGAACCCTGAACGTGTTTCCCTGGTCTACTTGAATCTGATGTGAAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| CDS-3UTR CCA 90 bp | CCATCAGATTTCAGACATGGCCAATTTTCTGGTCCCACTCCTTTCTACTTTGTGTCCAGTATAGTAAGATaGAGATCAAGATCAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PSDFRHGQFSGPTPFYFVSSIVR*RSRSEE Trigger: TTCTTCTGATCTTGATCTCCATCTTACTATACTGGA...CACAAAGTAGAAAGGAGTGGGACCAGAAAATTGGCCATGTCTGAAATCTGATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| CDS-3UTR TCA 90 bp | GTTTCCAGTATAGTAAGATGGAGATCAAGATCAGAAGAATTACCAGAGAAACAAAGAGTCCCAGCTCTGTaGCATTTATCCTGTCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VSSIVRWRSRSEELPEKQRVPAL*HLSCLC Trigger: ACAAAGACAGGATAAATGTCACAGAGCTGGGACTCT...TTGTTTCTCTGGTAATTCTTCTGATCTTGATCTCCATCTTACTATACTGGAAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166512.2 ENSMUST00000167355.8 |
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| CDS-3UTR TCA 90 bp | CAGTATAGTAAGATGGAGATCAAGATCAGAAGAATTACCAGAGAAACAATGCTTAGAGTCCCAGCTCTGTaGCATTTATCCTGTCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QYSKMEIKIRRITRETMLRVPAL*HLSCLC Trigger: ACAAAGACAGGATAAATGTCACAGAGCTGGGACTCT...AAGCATTGTTTCTCTGGTAATTCTTCTGATCTTGATCTCCATCTTACTATACTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166512.2 ENSMUST00000167355.8 |
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| CDS-3UTR CCA 90 bp | TTCCTAAAAATTCCATCAGATTTCAGACATGGCCAATTTTCTGGTCCCACTCCTTCCAGTATAGTAAGATaGAGATCAAGATCAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FLKIPSDFRHGQFSGPTPSSIVR*RSRSEE Trigger: TTCTTCTGATCTTGATCTCCATCTTACTATACTGGA...AGGAGTGGGACCAGAAAATTGGCCATGTCTGAAATCTGATGGAATTTTTAGGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| CDS TCA 90 bp | CCTTCCAGGAGATGGCAGGGGCTGGACGGGCAGTCGCAGAGCAAGTaGTGTTTAGGTGGTCTTCAAAATAGTTGTAGTGAAGGTGTACTA | + |
|
Preference number: 5 (lower is better) Translates to: PSRRWQGLDGQSQSK*CLGGLQNSCSEGVL Trigger: TAGTACACCTTCACTACAACTATTTTGAAGACCACCTAAACATCACTTGCTCTGCGACTGCCCGTCCAGCCCCTGCCATCTCCTGGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| CDS-3UTR CAA 90 bp | TTCCTTCCCAACTTGAGTTTTGGGGTCTTTGACCCGGAGGATGCTGGTGACAGAATCGTAAGGATGCAGTaGTGTGCAGCGCCTTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: FLPNLSFGVFDPEDAGDRIVRMQ*CAAPFF Trigger: AAAGAAAGGCGCTGCACACAACTGCATCCTTACGAT...TCTGTCACCAGCATCCTCCGGGTCAAAGACCCCAAAACTCAAGTTGGGAAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166512.2 ENSMUST00000167355.8 |
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| CDS CCA 90 bp | GGGCTCACGGCTTTCTTTTTCTGCCATGTCACAATCAAGGGTTCCTaGGATGTTTTTAGAGAACATCGTAAGGATGCAGTTGTGTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GLTAFFFCHVTIKGS*DVFREHRKDAVVCS Trigger: GCTGCACACAACTGCATCCTTACGATGTTCTCTAAAAACATCCCAGGAACCCTTGATTGTGACATGGCAGAAAAAGAAAGCCGTGAGCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 ENSMUST00000166512.2 ENSMUST00000167355.8 |
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| CDS TCA 90 bp | GTAGCAGCCCTCATCTTCCAATGTTGTGTTCCAGAAGGTGATGCTTaGGTTCCAGAGTCCCAGCTCTGTGACATTTATCCTGTCTTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: VAALIFQCCVPEGDA*VPESQLCDIYPVFV Trigger: TACAAAGACAGGATAAATGTCACAGAGCTGGGACTCTGGAACTCAAGCATCACCTTCTGGAACACAACATTGGAAGATGAGGGCTGCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 ENSMUST00000166512.2 ENSMUST00000167355.8 |
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| CDS TCA 90 bp | AAGGTGTACTATGGGCTGTACATAGAGGGTAAGGCAAGCTGTTCCTaGGACCTTCTGAGAACCAAACGTGTTGAAGAGACACATGTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: KVYYGLYIEGKASCS*DLLRTKRVEETHVA Trigger: TGCTACATGTGTCTCTTCAACACGTTTGGTTCTCAGAAGGTCTCAGGAACAGCTTGCCTTACCCTCTATGTACAGCCCATAGTACACCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| CDS-3UTR CAA 90 bp | CCATCAGATTTCAGACATGGCCAATTTTCTGGTCCCACTCCTTTCTACTTTGTGATCGTAAGGATGCAGTaGTGTGCAGCGCCTTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: PSDFRHGQFSGPTPFYFVIVRMQ*CAAPFF Trigger: AAAGAAAGGCGCTGCACACAACTGCATCCTTACGAT...CACAAAGTAGAAAGGAGTGGGACCAGAAAATTGGCCATGTCTGAAATCTGATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| CDS-3UTR CAA 90 bp | AGTCAATCACATTCCCCAGGTATAAAACCTGGCAGATCACTTCCTTCCCAACTTATCGTAAGGATGCAGTaGTGTGCAGCGCCTTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SQSHSPGIKPGRSLPSQLIVRMQ*CAAPFF Trigger: AAAGAAAGGCGCTGCACACAACTGCATCCTTACGAT...AAGTTGGGAAGGAAGTGATCTGCCAGGTTTTATACCTGGGGAATGTGATTGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166512.2 ENSMUST00000167355.8 |
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| CDS-3UTR CAA 90 bp | TTCCTAAAAATTCCATCAGATTTCAGACATGGCCAATTTTCTGGTCCCACTCCTATCGTAAGGATGCAGTaGTGTGCAGCGCCTTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: FLKIPSDFRHGQFSGPTPIVRMQ*CAAPFF Trigger: AAAGAAAGGCGCTGCACACAACTGCATCCTTACGAT...AGGAGTGGGACCAGAAAATTGGCCATGTCTGAAATCTGATGGAATTTTTAGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| CDS-3UTR CAA 90 bp | AAAGGTACTCTCAGAAGCTCTTTGGACCCTTCTGTGTTCTTTCTTCTTTTGCTTCACTTCCTTCCCAACTaGAGTTTTGGGGTCTTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: KGTLRSSLDPSVFFLLLLHFLPN*SFGVFD Trigger: GTCAAAGACCCCAAAACTCAAGTTGGGAAGGAAGTG...AAGCAAAAGAAGAAAGAACACAGAAGGGTCCAAAGAGCTTCTGAGAGTACCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| CDS TCA 72 bp | AGATGGCAGGGGCTGGACGGGCAGTCGCAGAGCAAGTaGTGTTTAGGTGGTCTTCAAAATAGTTGTAGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: RWQGLDGQSQSK*CLGGLQNSCSE Trigger: TTCACTACAACTATTTTGAAGACCACCTAAACATCACTTGCTCTGCGACTGCCCGTCCAGCCCCTGCCATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| CDS CAA 72 bp | CCTGGGATGTTTTTAGAGAACATCGTAAGGATGCAGTaGTGTGCAGCGCCTTTCTTTCATCCTGGGTCACCA | + |
|
Preference number: 6 (lower is better) Translates to: PGMFLENIVRMQ*CAAPFFHPGSP Trigger: TGGTGACCCAGGATGAAAGAAAGGCGCTGCACACAACTGCATCCTTACGATGTTCTCTAAAAACATCCCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 ENSMUST00000166512.2 ENSMUST00000167355.8 |
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| CDS CAA 90 bp | TCAAGGGTTCCTGGGATGTTTTTAGAGAACATCGTAAGGATGCAGTaGTGTGCAGCGCCTTTCTTTCATCCTGGGTCACCACTTCCACTT | + |
|
Preference number: 6 (lower is better) Translates to: SRVPGMFLENIVRMQ*CAAPFFHPGSPLPL Trigger: AAGTGGAAGTGGTGACCCAGGATGAAAGAAAGGCGCTGCACACAACTGCATCCTTACGATGTTCTCTAAAAACATCCCAGGAACCCTTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 ENSMUST00000166512.2 ENSMUST00000167355.8 |
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| CDS TCA 72 bp | AAGCTGTTCCTGAGACCTTCTGAGAACCAAACGTGTTaGAGAGACACATGTAGCAGCCCTCATCTTCCAATG | + |
|
Preference number: 6 (lower is better) Translates to: KLFLRPSENQTC*RDTCSSPHLPM Trigger: CATTGGAAGATGAGGGCTGCTACATGTGTCTCTTCAACACGTTTGGTTCTCAGAAGGTCTCAGGAACAGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 ENSMUST00000166512.2 ENSMUST00000167355.8 |
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| CDS TCA 72 bp | TATGGGCTGTACATAGAGGGTAAGGCAAGCTGTTCCTaGGACCTTCTGAGAACCAAACGTGTTGAAGAGACA | + |
|
Preference number: 6 (lower is better) Translates to: YGLYIEGKASCS*DLLRTKRVEET Trigger: TGTCTCTTCAACACGTTTGGTTCTCAGAAGGTCTCAGGAACAGCTTGCCTTACCCTCTATGTACAGCCCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 |
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| CDS TCA 72 bp | TGTACTATGGGCATAGAGGGTAAGGCAAGCTGTTCCTaGGACCTTCTGAGAACCAAACGTGTTGAAGAGACA | + |
|
Preference number: 6 (lower is better) Translates to: CTMGIEGKASCS*DLLRTKRVEET Trigger: TGTCTCTTCAACACGTTTGGTTCTCAGAAGGTCTCAGGAACAGCTTGCCTTACCCTCTATGCCCATAGTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166512.2 ENSMUST00000167355.8 |
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| CDS GCA 72 bp | GATGTTTTTAGAGAACATCGTAAGGATGCAGTTGTGTaGAGCGCCTTTCTTTCATCCTGGGTCACCACTTCC | + |
|
Preference number: 6 (lower is better) Translates to: DVFREHRKDAVV*SAFLSSWVTTS Trigger: GGAAGTGGTGACCCAGGATGAAAGAAAGGCGCTGCACACAACTGCATCCTTACGATGTTCTCTAAAAACATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 ENSMUST00000166512.2 ENSMUST00000167355.8 |
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| CDS TCA 72 bp | CTCATCTTCCAATGTTGTGTTCCAGAAGGTGATGCTTaGGTTCCAGAGTCCCAGCTCTGTGACATTTATCCT | + |
|
Preference number: 6 (lower is better) Translates to: LIFQCCVPEGDA*VPESQLCDIYP Trigger: AGGATAAATGTCACAGAGCTGGGACTCTGGAACTCAAGCATCACCTTCTGGAACACAACATTGGAAGATGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 ENSMUST00000166512.2 ENSMUST00000167355.8 |
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| CDS GCA 72 bp | GTGACCATGTTTTCTGGGCTCACGGCTTTCTTTTTCTaGCATGTCACAATCAAGGGTTCCTGGGATGTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: VTMFSGLTAFFF*HVTIKGSWDVF Trigger: AAAAACATCCCAGGAACCCTTGATTGTGACATGGCAGAAAAAGAAAGCCGTGAGCCCAGAAAACATGGTCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000023341.15 ENSMUST00000163230.8 ENSMUST00000166512.2 ENSMUST00000167355.8 |
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