Pregenerated sensors for CD1D2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041750Ensembl transcript IDs: ENSMUST00000041920.5, ENSMUST00000192481.2, ENSMUST00000194208.6
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CTTTTAAGATCACTAGTATTCAAGAGCACAGACACCACCCCCACCTCACTCCGCAAGGAGCATACTGGTTaGTCTTCACTTCTTCAGGAT | + |
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Preference number: 2 (lower is better) Translates to: LLRSLVFKSTDTTPTSLRKEHTG*SSLLQD Trigger: ATCCTGAAGAAGTGAAGAGCAACCAGTATGCTCCTT...GCGGAGTGAGGTGGGGGTGGTGTCTGTGCTCTTGAATACTAGTGATCTTAAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194208.6 |
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| 3UTR-3UTR CAA 90 bp | CTACTTTTAAGATCACTAGTATTCAAGAGCACAGACACCACCCCCACCTCACTCAAAGGAGCATACTGGTaGCTCTTCACTTCTTCAGGA | + |
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Preference number: 3 (lower is better) Translates to: LLLRSLVFKSTDTTPTSLKGAYW*LFTSSG Trigger: TCCTGAAGAAGTGAAGAGCAACCAGTATGCTCCTTT...GAGTGAGGTGGGGGTGGTGTCTGTGCTCTTGAATACTAGTGATCTTAAAAGTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194208.6 |
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| CDS-3UTR CCA 90 bp | GGTTGCTCTTCACTTCTTCAGGATTCCTCTCTTTCATCCCCAGATCCTGAGCAGGGCCATGTGCAGAGCTaGGGACACTGGACAACCAGG | + |
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Preference number: 4 (lower is better) Translates to: GCSSLLQDSSLSSPDPEQGHVQS*GHWTTR Trigger: CCTGGTTGTCCAGTGTCCCCAGCTCTGCACATGGCC...CTGCTCAGGATCTGGGGATGAAAGAGAGGAATCCTGAAGAAGTGAAGAGCAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041920.5 ENSMUST00000192481.2 ENSMUST00000194208.6 |
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| CDS-3UTR GCA 90 bp | GGTTGCTCTTCACTTCTTCAGGATTCCTCTCTTTCATCCCCAGATCCTGAGCAGCTGCAGATGGCCATGTaGAGAGCTGGGGACACTGGA | + |
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Preference number: 4 (lower is better) Translates to: GCSSLLQDSSLSSPDPEQLQMAM*RAGDTG Trigger: TCCAGTGTCCCCAGCTCTGCACATGGCCATCTGCAG...CTGCTCAGGATCTGGGGATGAAAGAGAGGAATCCTGAAGAAGTGAAGAGCAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041920.5 ENSMUST00000192481.2 ENSMUST00000194208.6 |
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| CDS-3UTR CCA 90 bp | GCATACTGGTTGCTCTTCACTTCTTCAGGATTCCTCTCTTTCATCCCCAGATCCCAGAGCTGGGGACACTaGACAACCAGGCCACTGGCT | + |
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Preference number: 4 (lower is better) Translates to: AYWLLFTSSGFLSFIPRSQSWGH*TTRPLA Trigger: AGCCAGTGGCCTGGTTGTCCAGTGTCCCCAGCTCTG...GGATCTGGGGATGAAAGAGAGGAATCCTGAAGAAGTGAAGAGCAACCAGTATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041920.5 ENSMUST00000192481.2 ENSMUST00000194208.6 |
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| CDS-3UTR CCA 90 bp | CATACTGGTTGCTCTTCACTTCTTCAGGATTCCTCTCTTTCATCCCCAGATCCTCAGAGCTGGGGACACTaGACAACCAGGCCACTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HTGCSSLLQDSSLSSPDPQSWGH*TTRPLA Trigger: AGCCAGTGGCCTGGTTGTCCAGTGTCCCCAGCTCTG...AGGATCTGGGGATGAAAGAGAGGAATCCTGAAGAAGTGAAGAGCAACCAGTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041920.5 ENSMUST00000192481.2 ENSMUST00000194208.6 |
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| CDS-3UTR CCA 90 bp | CTACTTTTAAGATCACTAGTATTCAAGAGCACAGACACCACCCCCACCTCACTCCAGAGCTGGGGACACTaGACAACCAGGCCACTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLLRSLVFKSTDTTPTSLQSWGH*TTRPLA Trigger: AGCCAGTGGCCTGGTTGTCCAGTGTCCCCAGCTCTG...GAGTGAGGTGGGGGTGGTGTCTGTGCTCTTGAATACTAGTGATCTTAAAAGTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000194208.6 |
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| CDS-3UTR CCA 90 bp | AGCATACTGGTTGCTCTTCACTTCTTCAGGATTCCTCTCTTTCATCCCCAGATCGGCCATGTGCAGAGCTaGGGACACTGGACAACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SILVALHFFRIPLFHPQIGHVQS*GHWTTR Trigger: CCTGGTTGTCCAGTGTCCCCAGCTCTGCACATGGCC...GATCTGGGGATGAAAGAGAGGAATCCTGAAGAAGTGAAGAGCAACCAGTATGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041920.5 ENSMUST00000192481.2 ENSMUST00000194208.6 |
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| CDS-3UTR CCA 90 bp | AGCATACTGGTTGCTCTTCACTTCTTCAGGATTCCTCTCTTTCATCCCCAGATCCACACCAGCTGCAGATaGCCATGTGCAGAGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SILVALHFFRIPLFHPQIHTSCR*PCAELG Trigger: CCCCAGCTCTGCACATGGCCATCTGCAGCTGGTGTG...GATCTGGGGATGAAAGAGAGGAATCCTGAAGAAGTGAAGAGCAACCAGTATGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041920.5 ENSMUST00000192481.2 ENSMUST00000194208.6 |
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| CDS-3UTR GCA 90 bp | GCATACTGGTTGCTCTTCACTTCTTCAGGATTCCTCTCTTTCATCCCCAGATCCCTCCAACGGTGTGTCTaGAGATCCCCCAGCAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: AYWLLFTSSGFLSFIPRSLQRCV*RSPSKI Trigger: GATCTTGCTGGGGGATCTGCAGACACACCGTTGGAG...GGATCTGGGGATGAAAGAGAGGAATCCTGAAGAAGTGAAGAGCAACCAGTATGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041920.5 ENSMUST00000192481.2 ENSMUST00000194208.6 |
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| CDS-3UTR GCA 90 bp | GGAGCATACTGGTTGCTCTTCACTTCTTCAGGATTCCTCTCTTTCATCCCCAGACTCCAACGGTGTGTCTaGAGATCCCCCAGCAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: GAYWLLFTSSGFLSFIPRLQRCV*RSPSKI Trigger: GATCTTGCTGGGGGATCTGCAGACACACCGTTGGAG...TCTGGGGATGAAAGAGAGGAATCCTGAAGAAGTGAAGAGCAACCAGTATGCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000041920.5 ENSMUST00000192481.2 ENSMUST00000194208.6 |
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| CDS-3UTR TCA 90 bp | GGAGCATACTGGTTGCTCTTCACTTCTTCAGGATTCCTCTCTTTCATCCCCAGAGAAGCTGATGATGGCTaGGTCATTACTCCAACGGTG | + |
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Preference number: 4 (lower is better) Translates to: GAYWLLFTSSGFLSFIPREADDG*VITPTV Trigger: CACCGTTGGAGTAATGACTCAGCCATCATCAGCTTC...TCTGGGGATGAAAGAGAGGAATCCTGAAGAAGTGAAGAGCAACCAGTATGCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041920.5 ENSMUST00000192481.2 ENSMUST00000194208.6 |
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| CDS-3UTR TCA 90 bp | ACTTTTAAGATCACTAGTATTCAAGAGCACAGACACCACCCCCACCTCACTCCGGAAGCTGATGATGGCTaGGTCATTACTCCAACGGTG | + |
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Preference number: 4 (lower is better) Translates to: TFKITSIQEHRHHPHLTPEADDG*VITPTV Trigger: CACCGTTGGAGTAATGACTCAGCCATCATCAGCTTC...CGGAGTGAGGTGGGGGTGGTGTCTGTGCTCTTGAATACTAGTGATCTTAAAAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194208.6 |
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| CDS-3UTR TCA 90 bp | AGCATACTGGTTGCTCTTCACTTCTTCAGGATTCCTCTCTTTCATCCCCAGATCCATCCCAGTAGAGGATaGTATCCTGTCCTCCTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SILVALHFFRIPLFHPQIHPSRG*YPVLLG Trigger: GCCTAGGAGGACAGGATATCATCCTCTACTGGGATG...GATCTGGGGATGAAAGAGAGGAATCCTGAAGAAGTGAAGAGCAACCAGTATGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041920.5 ENSMUST00000192481.2 ENSMUST00000194208.6 |
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| CDS-3UTR CCA 90 bp | GGCTGCAGGGAAACCGCAGGCTCTCCTACTTTTAAGATCACTAGTATTCAAGAGTTACTCAACTTGCCCTaGGACCATGGCTTCGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GCRETAGSPTFKITSIQELLNLP*DHGFVK Trigger: CTTCACGAAGCCATGGTCCCAGGGCAAGTTGAGTAA...CTCTTGAATACTAGTGATCTTAAAAGTAGGAGAGCCTGCGGTTTCCCTGCAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194208.6 |
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| CDS-3UTR CCA 90 bp | AAATTTAAAGGAGCATACTGGTTGCTCTTCACTTCTTCAGGATTCCTCTCTTTCGGCCATGTGCAGAGCTaGGGACACTGGACAACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KFKGAYWLLFTSSGFLSFGHVQS*GHWTTR Trigger: CCTGGTTGTCCAGTGTCCCCAGCTCTGCACATGGCC...GAAAGAGAGGAATCCTGAAGAAGTGAAGAGCAACCAGTATGCTCCTTTAAATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041920.5 ENSMUST00000192481.2 ENSMUST00000194208.6 |
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| CDS-3UTR CCA 90 bp | ATTCCTAAATTTAAAGGAGCATACTGGTTGCTCTTCACTTCTTCAGGATTCCTCCACACCAGCTGCAGATaGCCATGTGCAGAGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: IPKFKGAYWLLFTSSGFLHTSCR*PCAELG Trigger: CCCCAGCTCTGCACATGGCCATCTGCAGCTGGTGTG...GAGGAATCCTGAAGAAGTGAAGAGCAACCAGTATGCTCCTTTAAATTTAGGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041920.5 ENSMUST00000192481.2 ENSMUST00000194208.6 |
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| CDS-3UTR CCA 90 bp | AAATTTAAAGGAGCATACTGGTTGCTCTTCACTTCTTCAGGATTCCTCTCTTTCCACACCAGCTGCAGATaGCCATGTGCAGAGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KFKGAYWLLFTSSGFLSFHTSCR*PCAELG Trigger: CCCCAGCTCTGCACATGGCCATCTGCAGCTGGTGTG...GAAAGAGAGGAATCCTGAAGAAGTGAAGAGCAACCAGTATGCTCCTTTAAATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041920.5 ENSMUST00000192481.2 ENSMUST00000194208.6 |
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| CDS-3UTR GCA 90 bp | TTCCTAAATTTAAAGGAGCATACTGGTTGCTCTTCACTTCTTCAGGATTCCTCTCTGCAGATGGCCATGTaGAGAGCTGGGGACACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: FLNLKEHTGCSSLLQDSSLQMAM*RAGDTG Trigger: TCCAGTGTCCCCAGCTCTGCACATGGCCATCTGCAG...AGAGGAATCCTGAAGAAGTGAAGAGCAACCAGTATGCTCCTTTAAATTTAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041920.5 ENSMUST00000192481.2 ENSMUST00000194208.6 |
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| CDS-3UTR CCA 90 bp | ATTCCTAAATTTAAAGGAGCATACTGGTTGCTCTTCACTTCTTCAGGATTCCTCAGACCACGGGCAAACTaGGGCCAGGTGTCATTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: IPKFKGAYWLLFTSSGFLRPRAN*GQVSFR Trigger: CCTGAATGACACCTGGCCCCAGTTTGCCCGTGGTCT...GAGGAATCCTGAAGAAGTGAAGAGCAACCAGTATGCTCCTTTAAATTTAGGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041920.5 ENSMUST00000192481.2 ENSMUST00000194208.6 |
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| CDS-3UTR CCA 90 bp | GCATACTGGTTGCTCTTCACTTCTTCAGGATTCCTCTCTTTCATCCCCAGATCCTGTCTCATCAGCATTTaGCAGGAAATCACCTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: AYWLLFTSSGFLSFIPRSCLISI*QEITSV Trigger: CACAGAGGTGATTTCCTGCCAAATGCTGATGAGACA...GGATCTGGGGATGAAAGAGAGGAATCCTGAAGAAGTGAAGAGCAACCAGTATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041920.5 ENSMUST00000192481.2 ENSMUST00000194208.6 |
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| CDS-3UTR GCA 90 bp | ATATTCCTAAATTTAAAGGAGCATACTGGTTGCTCTTCACTTCTTCAGGATTCCCTCCAACGGTGTGTCTaGAGATCCCCCAGCAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: IFLNLKEHTGCSSLLQDSLQRCV*RSPSKI Trigger: GATCTTGCTGGGGGATCTGCAGACACACCGTTGGAG...GGAATCCTGAAGAAGTGAAGAGCAACCAGTATGCTCCTTTAAATTTAGGAATAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041920.5 ENSMUST00000192481.2 ENSMUST00000194208.6 |
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| CDS-3UTR CCA 90 bp | GTAATATTCCTAAATTTAAAGGAGCATACTGGTTGCTCTTCACTTCTTCAGGATAGACCACGGGCAAACTaGGGCCAGGTGTCATTCAGG | + |
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Preference number: 4 (lower is better) Translates to: VIFLNLKEHTGCSSLLQDRPRAN*GQVSFR Trigger: CCTGAATGACACCTGGCCCCAGTTTGCCCGTGGTCT...ATCCTGAAGAAGTGAAGAGCAACCAGTATGCTCCTTTAAATTTAGGAATATTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041920.5 ENSMUST00000192481.2 ENSMUST00000194208.6 |
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| CDS-3UTR TCA 90 bp | ATTCCTAAATTTAAAGGAGCATACTGGTTGCTCTTCACTTCTTCAGGATTCCTCGAAGCTGATGATGGCTaGGTCATTACTCCAACGGTG | + |
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Preference number: 4 (lower is better) Translates to: IPKFKGAYWLLFTSSGFLEADDG*VITPTV Trigger: CACCGTTGGAGTAATGACTCAGCCATCATCAGCTTC...GAGGAATCCTGAAGAAGTGAAGAGCAACCAGTATGCTCCTTTAAATTTAGGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041920.5 ENSMUST00000192481.2 ENSMUST00000194208.6 |
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| CDS-3UTR TCA 90 bp | AATATTCCTAAATTTAAAGGAGCATACTGGTTGCTCTTCACTTCTTCAGGATTCCATCCCAGTAGAGGATaGTATCCTGTCCTCCTAGGC | + |
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Preference number: 4 (lower is better) Translates to: NIPKFKGAYWLLFTSSGFHPSRG*YPVLLG Trigger: GCCTAGGAGGACAGGATATCATCCTCTACTGGGATG...GAATCCTGAAGAAGTGAAGAGCAACCAGTATGCTCCTTTAAATTTAGGAATATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041920.5 ENSMUST00000192481.2 ENSMUST00000194208.6 |
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| CDS-3UTR CCA 90 bp | ATATTCCTAAATTTAAAGGAGCATACTGGTTGCTCTTCACTTCTTCAGGATTCCTTACTCAACTTGCCCTaGGACCATGGCTTCGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: IFLNLKEHTGCSSLLQDSLLNLP*DHGFVK Trigger: CTTCACGAAGCCATGGTCCCAGGGCAAGTTGAGTAA...GGAATCCTGAAGAAGTGAAGAGCAACCAGTATGCTCCTTTAAATTTAGGAATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041920.5 ENSMUST00000194208.6 |
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| CDS-3UTR CCA 90 bp | AATATTCCTAAATTTAAAGGAGCATACTGGTTGCTCTTCACTTCTTCAGGATTCAACTTCTCCCACTGCTaGTTACTCAACTTGCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: NIPKFKGAYWLLFTSSGFNFSHC*LLNLPW Trigger: CCAGGGCAAGTTGAGTAACCAGCAGTGGGAGAAGTT...GAATCCTGAAGAAGTGAAGAGCAACCAGTATGCTCCTTTAAATTTAGGAATATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041920.5 ENSMUST00000194208.6 |
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| CDS-3UTR CCA 90 bp | AAATTTAAAGGAGCATACTGGTTGCTCTTCACTTCTTCAGGATTCCTCTCTTTCTGTCTCATCAGCATTTaGCAGGAAATCACCTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: KFKGAYWLLFTSSGFLSFCLISI*QEITSV Trigger: CACAGAGGTGATTTCCTGCCAAATGCTGATGAGACA...GAAAGAGAGGAATCCTGAAGAAGTGAAGAGCAACCAGTATGCTCCTTTAAATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041920.5 ENSMUST00000192481.2 ENSMUST00000194208.6 |
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| CDS-3UTR CCA 90 bp | AATATTCCTAAATTTAAAGGAGCATACTGGTTGCTCTTCACTTCTTCAGGATTCATCTCAATGGGATCCTaGGACCATGGCTTCGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: NIPKFKGAYWLLFTSSGFISMGS*DHGFVK Trigger: CTTCACGAAGCCATGGTCCCAGGATCCCATTGAGAT...GAATCCTGAAGAAGTGAAGAGCAACCAGTATGCTCCTTTAAATTTAGGAATATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192481.2 |
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| CDS-3UTR CCA 90 bp | AATATTCCTAAATTTAAAGGAGCATACTGGTTGCTCTTCACTTCTTCAGGATTCTGTCTCATCAGCATTTaGCAGGAAATCACCTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: NIPKFKGAYWLLFTSSGFCLISI*QEITSV Trigger: CACAGAGGTGATTTCCTGCCAAATGCTGATGAGACA...GAATCCTGAAGAAGTGAAGAGCAACCAGTATGCTCCTTTAAATTTAGGAATATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041920.5 ENSMUST00000192481.2 ENSMUST00000194208.6 |
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| CDS GCA 90 bp | TGTGCAGAGCTGGGGACACTGGACAACCAGGCCACTGGCTTCTCTTaGTTCTCTAGGTCTGACTTCCCTGCCTCTAGGAGACCACGGGCA | + |
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Preference number: 5 (lower is better) Translates to: CAELGTLDNQATGFS*FSRSDFPASRRPRA Trigger: TGCCCGTGGTCTCCTAGAGGCAGGGAAGTCAGACCTAGAGAAGCAAGAGAAGCCAGTGGCCTGGTTGTCCAGTGTCCCCAGCTCTGCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041920.5 ENSMUST00000192481.2 ENSMUST00000194208.6 |
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| CDS CCA 90 bp | TTCTCTAGGTCTGACTTCCCTGCCTCTAGGAGACCACGGGCAAACTaGGGCCAGGTGTCATTCAGGAGCGTCTGCACGGTTGCACTTGTC | + |
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Preference number: 5 (lower is better) Translates to: FSRSDFPASRRPRAN*GQVSFRSVCTVALV Trigger: GACAAGTGCAACCGTGCAGACGCTCCTGAATGACACCTGGCCCCAGTTTGCCCGTGGTCTCCTAGAGGCAGGGAAGTCAGACCTAGAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041920.5 ENSMUST00000192481.2 ENSMUST00000194208.6 |
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| CDS TCA 90 bp | GGCCAGGTGTCATTCAGGAGCGTCTGCACGGTTGCACTTGTCCCTTaGTCAGCGTTGAGCACTTTGATGGGCAAGTCTAACCAAGATGGG | + |
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Preference number: 5 (lower is better) Translates to: GQVSFRSVCTVALVP*SALSTLMGKSNQDG Trigger: CCCATCTTGGTTAGACTTGCCCATCAAAGTGCTCAACGCTGATCAAGGGACAAGTGCAACCGTGCAGACGCTCCTGAATGACACCTGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041920.5 ENSMUST00000192481.2 ENSMUST00000194208.6 |
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| CDS GCA 90 bp | TTCGTGAAGCTGATGATGGCTGAGTCATTACTCCAACGGTGTGTCTaGAGATCCCCCAGCAAGATCAGGCTGTCTGTGCGGGACCAGCTT | + |
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Preference number: 5 (lower is better) Translates to: FVKLMMAESLLQRCV*RSPSKIRLSVRDQL Trigger: AAGCTGGTCCCGCACAGACAGCCTGATCTTGCTGGGGGATCTGCAGACACACCGTTGGAGTAATGACTCAGCCATCATCAGCTTCACGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041920.5 ENSMUST00000192481.2 ENSMUST00000194208.6 |
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| CDS TCA 90 bp | ACTCAACTTGCCCTGGGACCATGGCTTCGTGAAGCTGATGATGGCTaGGTCATTACTCCAACGGTGTGTCTGCAGATCCCCCAGCAAGAT | + |
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Preference number: 5 (lower is better) Translates to: TQLALGPWLREADDG*VITPTVCLQIPQQD Trigger: ATCTTGCTGGGGGATCTGCAGACACACCGTTGGAGTAATGACTCAGCCATCATCAGCTTCACGAAGCCATGGTCCCAGGGCAAGTTGAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041920.5 ENSMUST00000194208.6 |
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| CDS-3UTR CAA 90 bp | ACTTTTAAGATCACTAGTATTCAAGAGCACAGACACCACCCCCACCTCACTCCGTGCTGGTTACTCAACTaGCCCTGGGACCATGGCTTC | + |
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Preference number: 5 (lower is better) Translates to: TFKITSIQEHRHHPHLTPCWLLN*PWDHGF Trigger: GAAGCCATGGTCCCAGGGCAAGTTGAGTAACCAGCA...CGGAGTGAGGTGGGGGTGGTGTCTGTGCTCTTGAATACTAGTGATCTTAAAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194208.6 |
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| CDS-3UTR CAA 90 bp | CATACTGGTTGCTCTTCACTTCTTCAGGATTCCTCTCTTTCATCCCCAGATCCTTGCTGGTTACTCAACTaGCCCTGGGACCATGGCTTC | + |
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Preference number: 5 (lower is better) Translates to: HTGCSSLLQDSSLSSPDPCWLLN*PWDHGF Trigger: GAAGCCATGGTCCCAGGGCAAGTTGAGTAACCAGCA...AGGATCTGGGGATGAAAGAGAGGAATCCTGAAGAAGTGAAGAGCAACCAGTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041920.5 ENSMUST00000194208.6 |
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| CDS-3UTR CAA 90 bp | GGTTGCTCTTCACTTCTTCAGGATTCCTCTCTTTCATCCCCAGATCCTGAGCAGGAAGGTGTAATTCTTTaGCTGGACTTCAGATTGTCC | + |
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Preference number: 5 (lower is better) Translates to: GCSSLLQDSSLSSPDPEQEGVIL*LDFRLS Trigger: GGACAATCTGAAGTCCAGCAAAAGAATTACACCTTC...CTGCTCAGGATCTGGGGATGAAAGAGAGGAATCCTGAAGAAGTGAAGAGCAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041920.5 ENSMUST00000192481.2 ENSMUST00000194208.6 |
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| CDS-3UTR CAA 90 bp | CTACTTTTAAGATCACTAGTATTCAAGAGCACAGACACCACCCCCACCTCACTCTTAGGTGACATCATTTaGACTAATTCCTGTATGTCC | + |
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Preference number: 5 (lower is better) Translates to: LLLRSLVFKSTDTTPTSLLGDII*TNSCMS Trigger: GGACATACAGGAATTAGTCAAAATGATGTCACCTAA...GAGTGAGGTGGGGGTGGTGTCTGTGCTCTTGAATACTAGTGATCTTAAAAGTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194208.6 |
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| CDS-3UTR CAA 90 bp | ATTCCTAAATTTAAAGGAGCATACTGGTTGCTCTTCACTTCTTCAGGATTCCTCGAAGGTGTAATTCTTTaGCTGGACTTCAGATTGTCC | + |
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Preference number: 5 (lower is better) Translates to: IPKFKGAYWLLFTSSGFLEGVIL*LDFRLS Trigger: GGACAATCTGAAGTCCAGCAAAAGAATTACACCTTC...GAGGAATCCTGAAGAAGTGAAGAGCAACCAGTATGCTCCTTTAAATTTAGGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041920.5 ENSMUST00000192481.2 ENSMUST00000194208.6 |
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| CDS-3UTR CAA 90 bp | AAATTTAAAGGAGCATACTGGTTGCTCTTCACTTCTTCAGGATTCCTCTCTTTCGAAGGTGTAATTCTTTaGCTGGACTTCAGATTGTCC | + |
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Preference number: 5 (lower is better) Translates to: KFKGAYWLLFTSSGFLSFEGVIL*LDFRLS Trigger: GGACAATCTGAAGTCCAGCAAAAGAATTACACCTTC...GAAAGAGAGGAATCCTGAAGAAGTGAAGAGCAACCAGTATGCTCCTTTAAATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041920.5 ENSMUST00000192481.2 ENSMUST00000194208.6 |
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| CDS-3UTR CAA 90 bp | AAATTTAAAGGAGCATACTGGTTGCTCTTCACTTCTTCAGGATTCCTCTCTTTCTTAGGTGACATCATTTaGACTAATTCCTGTATGTCC | + |
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Preference number: 5 (lower is better) Translates to: KFKGAYWLLFTSSGFLSFLGDII*TNSCMS Trigger: GGACATACAGGAATTAGTCAAAATGATGTCACCTAA...GAAAGAGAGGAATCCTGAAGAAGTGAAGAGCAACCAGTATGCTCCTTTAAATTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041920.5 ENSMUST00000194208.6 |
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| CDS CCA 72 bp | TCTGACTTCCCTGCCTCTAGGAGACCACGGGCAAACTaGGGCCAGGTGTCATTCAGGAGCGTCTGCACGGTT | + |
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Preference number: 6 (lower is better) Translates to: SDFPASRRPRAN*GQVSFRSVCTV Trigger: AACCGTGCAGACGCTCCTGAATGACACCTGGCCCCAGTTTGCCCGTGGTCTCCTAGAGGCAGGGAAGTCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041920.5 ENSMUST00000192481.2 ENSMUST00000194208.6 |
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| CDS TCA 72 bp | GCCCTGGGACCATGGCTTCGTGAAGCTGATGATGGCTaGGTCATTACTCCAACGGTGTGTCTGCAGATCCCC | + |
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Preference number: 6 (lower is better) Translates to: ALGPWLREADDG*VITPTVCLQIP Trigger: GGGGATCTGCAGACACACCGTTGGAGTAATGACTCAGCCATCATCAGCTTCACGAAGCCATGGTCCCAGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041920.5 ENSMUST00000194208.6 |
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| CDS GCA 72 bp | CTGATGATGGCTGAGTCATTACTCCAACGGTGTGTCTaGAGATCCCCCAGCAAGATCAGGCTGTCTGTGCGG | + |
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Preference number: 6 (lower is better) Translates to: LMMAESLLQRCV*RSPSKIRLSVR Trigger: CCGCACAGACAGCCTGATCTTGCTGGGGGATCTGCAGACACACCGTTGGAGTAATGACTCAGCCATCATCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000041920.5 ENSMUST00000192481.2 ENSMUST00000194208.6 |
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| CDS GCA 72 bp | CTGGGGCCAGGTGTCATTCAGGAGCGTCTGCACGGTTaGACTTGTCCCTTGATCAGCGTTGAGCACTTTGAT | + |
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Preference number: 6 (lower is better) Translates to: LGPGVIQERLHG*TCPLISVEHFD Trigger: ATCAAAGTGCTCAACGCTGATCAAGGGACAAGTGCAACCGTGCAGACGCTCCTGAATGACACCTGGCCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041920.5 ENSMUST00000192481.2 ENSMUST00000194208.6 |
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| CDS TCA 72 bp | ATCCTGGGACCATGGCTTCGTGAAGCTGATGATGGCTaGGTCATTACTCCAACGGTGTGTCTGCAGATCCCC | + |
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Preference number: 6 (lower is better) Translates to: ILGPWLREADDG*VITPTVCLQIP Trigger: GGGGATCTGCAGACACACCGTTGGAGTAATGACTCAGCCATCATCAGCTTCACGAAGCCATGGTCCCAGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192481.2 |
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| CDS CCA 72 bp | GCATTCCCAGGGTACATTTCACAGCCGGTAGACAACTaGATCTCAATGGGATCCTGGGACCATGGCTTCGTG | + |
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Preference number: 6 (lower is better) Translates to: AFPGYISQPVDN*ISMGSWDHGFV Trigger: CACGAAGCCATGGTCCCAGGATCCCATTGAGATCCAGTTGTCTACCGGCTGTGAAATGTACCCTGGGAATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192481.2 |
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| CDS TCA 72 bp | TCATTCAGGAGCGTCTGCACGGTTGCACTTGTCCCTTaGTCAGCGTTGAGCACTTTGATGGGCAAGTCTAAC | + |
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Preference number: 6 (lower is better) Translates to: SFRSVCTVALVP*SALSTLMGKSN Trigger: GTTAGACTTGCCCATCAAAGTGCTCAACGCTGATCAAGGGACAAGTGCAACCGTGCAGACGCTCCTGAATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041920.5 ENSMUST00000192481.2 ENSMUST00000194208.6 |
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