Pregenerated sensors for CD19 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030724Ensembl transcript IDs: ENSMUST00000032968.7, ENSMUST00000206325.2
Found 148 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGAGAGGCAGACAGTGTTTCCCAGTTTGTGCAGGGTGAGCAGGGATaGGTTACAACCAAACAGTCTGCTAGTCCCATCACTGTCTCTCCC | + |
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Preference number: 1 (lower is better) Translates to: READSVSQFVQGEQG*VTTKQSASPITVSP Trigger: GGGAGAGACAGTGATGGGACTAGCAGACTGTTTGGTTGTAACCCATCCCTGCTCACCCTGCACAAACTGGGAAACACTGTCTGCCTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| 3UTR GCA 90 bp | GAGCAGGCAGGATTAAAAGAGAGGCAGACAGTGTTTCCCAGTTTGTaGAGGGTGAGCAGGGATGGGTTACAACCAAACAGTCTGCTAGTC | + |
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Preference number: 1 (lower is better) Translates to: EQAGLKERQTVFPSL*RVSRDGLQPNSLLV Trigger: GACTAGCAGACTGTTTGGTTGTAACCCATCCCTGCTCACCCTGCACAAACTGGGAAACACTGTCTGCCTCTCTTTTAATCCTGCCTGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| 3UTR CCA 90 bp | GTTACAACCAAACAGTCTGCTAGTCCCATCACTGTCTCTCCCTTGTaGGACACCATGGAATGTAGCGGCTGGACATATTTGCATCACTGG | + |
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Preference number: 1 (lower is better) Translates to: VTTKQSASPITVSPL*DTMECSGWTYLHHW Trigger: CCAGTGATGCAAATATGTCCAGCCGCTACATTCCATGGTGTCCCACAAGGGAGAGACAGTGATGGGACTAGCAGACTGTTTGGTTGTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| 3UTR-3UTR TCA 90 bp | AGGCAGACAGTGTTTCCCAGTTTGTGCAGGGTGAGCAGGGATGGGTTACAACCATCTCCTTCCTCTGGGTaGCTCAGGGCTGGATTCAAC | + |
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Preference number: 2 (lower is better) Translates to: RQTVFPSLCRVSRDGLQPSPSSG*LRAGFN Trigger: GTTGAATCCAGCCCTGAGTCACCCAGAGGAAGGAGA...TGGTTGTAACCCATCCCTGCTCACCCTGCACAAACTGGGAAACACTGTCTGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| 3UTR-3UTR CCA 90 bp | AAACTCAGAGCTGGGGTGGTGTCTACATATGGTCAGAAGCTGAACCCCCTGAGCTGGGTGACTCAGGGCTaGATTCAACCCCATCTTCCC | + |
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Preference number: 2 (lower is better) Translates to: KLRAGVVSTYGQKLNPLSWVTQG*IQPHLP Trigger: GGGAAGATGGGGTTGAATCCAGCCCTGAGTCACCCA...GCTCAGGGGGTTCAGCTTCTGACCATATGTAGACACCACCCCAGCTCTGAGTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| 3UTR-3UTR CCA 90 bp | AAACTCAGAGCTGGGGTGGTGTCTACATATGGTCAGAAGCTGAACCCCCTGAGCCCTTGTGGGACACCATaGAATGTAGCGGCTGGACAT | + |
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Preference number: 2 (lower is better) Translates to: KLRAGVVSTYGQKLNPLSPCGTP*NVAAGH Trigger: ATGTCCAGCCGCTACATTCCATGGTGTCCCACAAGG...GCTCAGGGGGTTCAGCTTCTGACCATATGTAGACACCACCCCAGCTCTGAGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| 3UTR CAA 90 bp | CTGGAGCAGGCAGGATTAAAAGAGAGGCAGACAGTGTTTCCCAGTTaGTGCAGGGTGAGCAGGGATGGGTTACAACCAAACAGTCTGCTA | + |
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Preference number: 2 (lower is better) Translates to: LEQAGLKERQTVFPS*CRVSRDGLQPNSLL Trigger: TAGCAGACTGTTTGGTTGTAACCCATCCCTGCTCACCCTGCACAAACTGGGAAACACTGTCTGCCTCTCTTTTAATCCTGCCTGCTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| 3UTR-3UTR CCA 90 bp | GACTCAGGGCTGGATTCAACCCCATCTTCCCTTCCTATCCCACACAAGGGCCGGTTTCAGAATCAGATGTaGTTCTTGGGACCTAACGAA | + |
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Preference number: 2 (lower is better) Translates to: DSGLDSTPSSLPIPHKGRFQNQM*FLGPNE Trigger: TTCGTTAGGTCCCAAGAACCACATCTGATTCTGAAA...CCGGCCCTTGTGTGGGATAGGAAGGGAAGATGGGGTTGAATCCAGCCCTGAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGACATATTTGCATCACTGGATGTTAGGTGGCTAAATGCCAGGCCATGGGAAGGTCATTTCACTGACTaGCACCATCTGGGATCTCCA | + |
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Preference number: 2 (lower is better) Translates to: LDIFASLDVRWLNARPWEGHFTD*HHLGSP Trigger: TGGAGATCCCAGATGGTGTCAGTCAGTGAAATGACC...TTCCCATGGCCTGGCATTTAGCCACCTAACATCCAGTGATGCAAATATGTCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| 3UTR-3UTR GCA 90 bp | ATGTGTAAACTCAGAGCTGGGGTGGTGTCTACATATGGTCAGAAGCTGAACCCCGTGTGTGTGTCAGCATaGACACATCCTGATCAAGGT | + |
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Preference number: 2 (lower is better) Translates to: MCKLRAGVVSTYGQKLNPVCVSA*THPDQG Trigger: ACCTTGATCAGGATGTGTGCATGCTGACACACACAC...GGGGTTCAGCTTCTGACCATATGTAGACACCACCCCAGCTCTGAGTTTACACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| 3UTR-3UTR CCA 90 bp | TACTGGCCTGTTAGCCTGGAGCAGGCAGGATTAAAAGAGAGGCAGACAGTGTTTCTGACTGACACCATCTaGGATCTCCAGATTTCAGAA | + |
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Preference number: 2 (lower is better) Translates to: YWPVSLEQAGLKERQTVFLTDTI*DLQISE Trigger: TTCTGAAATCTGGAGATCCCAGATGGTGTCAGTCAG...AAACACTGTCTGCCTCTCTTTTAATCCTGCCTGCTCCAGGCTAACAGGCCAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGACATATTTGCATCACTGGATGTTAGGTGGCTAAATGCCAGGCCATGGGAACTAATTGGGTTTATTTaGGGAAAGCAAAGGGTCAAA | + |
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Preference number: 2 (lower is better) Translates to: LDIFASLDVRWLNARPWELIGFI*GKQRVK Trigger: TTTGACCCTTTGCTTTCCCCAAATAAACCCAATTAG...TTCCCATGGCCTGGCATTTAGCCACCTAACATCCAGTGATGCAAATATGTCCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| 3UTR-3UTR CCA 90 bp | ATGTGTAAACTCAGAGCTGGGGTGGTGTCTACATATGGTCAGAAGCTGAACCCCTTCAGAGAATTTGAGTaGCTAATTGGGTTTATTTGG | + |
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Preference number: 2 (lower is better) Translates to: MCKLRAGVVSTYGQKLNPFREFE*LIGFIW Trigger: CCAAATAAACCCAATTAGCCACTCAAATTCTCTGAA...GGGGTTCAGCTTCTGACCATATGTAGACACCACCCCAGCTCTGAGTTTACACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGACATATTTGCATCACTGGATGTTAGGTGGCTAAATGCCAGGCCATGGGAATTCAGAGAATTTGAGTaGCTAATTGGGTTTATTTGG | + |
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Preference number: 2 (lower is better) Translates to: LDIFASLDVRWLNARPWEFREFE*LIGFIW Trigger: CCAAATAAACCCAATTAGCCACTCAAATTCTCTGAA...TTCCCATGGCCTGGCATTTAGCCACCTAACATCCAGTGATGCAAATATGTCCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| 3UTR TCA 72 bp | GCAGGCACTCAGGTAGTGTTGCCAGAAACTCGAAGGTaGGGGTACTGGCCTGTTAGCCTGGAGCAGGCAGGA | + |
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Preference number: 3 (lower is better) Translates to: AGTQVVLPETRR*GYWPVSLEQAG Trigger: TCCTGCCTGCTCCAGGCTAACAGGCCAGTACCCTCACCTTCGAGTTTCTGGCAACACTACCTGAGTGCCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| 3UTR TCA 72 bp | AGGATGTACTCAGACCTCAGTTCTCCTTCCTCTGGGTaGCTCAGGGCTGGATTCAACCCCATCTTCCCTTCC | + |
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Preference number: 3 (lower is better) Translates to: RMYSDLSSPSSG*LRAGFNPIFPS Trigger: GGAAGGGAAGATGGGGTTGAATCCAGCCCTGAGTCACCCAGAGGAAGGAGAACTGAGGTCTGAGTACATCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| 3UTR CCA 72 bp | CTAGTCCCATCACTGTCTCTCCCTTGTGGGACACCATaGAATGTAGCGGCTGGACATATTTGCATCACTGGA | + |
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Preference number: 3 (lower is better) Translates to: LVPSLSLPCGTP*NVAAGHICITG Trigger: TCCAGTGATGCAAATATGTCCAGCCGCTACATTCCATGGTGTCCCACAAGGGAGAGACAGTGATGGGACTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| 3UTR CCA 72 bp | GACAGTGTTTCCCAGTTTGTGCAGGGTGAGCAGGGATaGGTTACAACCAAACAGTCTGCTAGTCCCATCACT | + |
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Preference number: 3 (lower is better) Translates to: DSVSQFVQGEQG*VTTKQSASPIT Trigger: AGTGATGGGACTAGCAGACTGTTTGGTTGTAACCCATCCCTGCTCACCCTGCACAAACTGGGAAACACTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| 3UTR CCA 72 bp | CTGGGATCTCCAGATTTCAGAATCAGATGTGGTTCTTaGGACCTAACGAAGTCCAGGCTAGTCACTTGGGAG | + |
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Preference number: 3 (lower is better) Translates to: LGSPDFRIRCGS*DLTKSRLVTWE Trigger: CTCCCAAGTGACTAGCCTGGACTTCGTTAGGTCCCAAGAACCACATCTGATTCTGAAATCTGGAGATCCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| 3UTR CCA 72 bp | AAACAGTCTGCTAGTCCCATCACTGTCTCTCCCTTGTaGGACACCATGGAATGTAGCGGCTGGACATATTTG | + |
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Preference number: 3 (lower is better) Translates to: KQSASPITVSPL*DTMECSGWTYL Trigger: CAAATATGTCCAGCCGCTACATTCCATGGTGTCCCACAAGGGAGAGACAGTGATGGGACTAGCAGACTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| 3UTR GCA 72 bp | GGATTAAAAGAGAGGCAGACAGTGTTTCCCAGTTTGTaGAGGGTGAGCAGGGATGGGTTACAACCAAACAGT | + |
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Preference number: 3 (lower is better) Translates to: GLKERQTVFPSL*RVSRDGLQPNS Trigger: ACTGTTTGGTTGTAACCCATCCCTGCTCACCCTGCACAAACTGGGAAACACTGTCTGCCTCTCTTTTAATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| 3UTR CCA 72 bp | ACACCATCTGGGATCTCCAGATTTCAGAATCAGATGTaGTTCTTGGGACCTAACGAAGTCCAGGCTAGTCAC | + |
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Preference number: 3 (lower is better) Translates to: TPSGISRFQNQM*FLGPNEVQASH Trigger: GTGACTAGCCTGGACTTCGTTAGGTCCCAAGAACCACATCTGATTCTGAAATCTGGAGATCCCAGATGGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| 3UTR CCA 72 bp | CTATCCCACACAAGGGCCGGCTTCAGAGAATTTGAGTaGCTAATTGGGTTTATTTGGGGAAAGCAAAGGGTC | + |
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Preference number: 3 (lower is better) Translates to: LSHTRAGFREFE*LIGFIWGKQRV Trigger: GACCCTTTGCTTTCCCCAAATAAACCCAATTAGCCACTCAAATTCTCTGAAGCCGGCCCTTGTGTGGGATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| 3UTR-3UTR CAA 90 bp | CTGGACATATTTGCATCACTGGATGTTAGGTGGCTAAATGCCAGGCCATGGGAAGGTCAAAAGGAAGCTTaGCTTGAACATGCATATGAG | + |
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Preference number: 3 (lower is better) Translates to: LDIFASLDVRWLNARPWEGQKEA*LEHAYE Trigger: CTCATATGCATGTTCAAGCAAAGCTTCCTTTTGACC...TTCCCATGGCCTGGCATTTAGCCACCTAACATCCAGTGATGCAAATATGTCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| 3UTR TCA 72 bp | GCATGCACACATCCTGATCAAGGTCATTTCACTGACTaGCACCATCTGGGATCTCCAGATTTCAGAATCAGA | + |
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Preference number: 3 (lower is better) Translates to: ACTHPDQGHFTD*HHLGSPDFRIR Trigger: TCTGATTCTGAAATCTGGAGATCCCAGATGGTGTCAGTCAGTGAAATGACCTTGATCAGGATGTGTGCATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| 3UTR CCA 72 bp | ATCCTGATCAAGGTCATTTCACTGACTGACACCATCTaGGATCTCCAGATTTCAGAATCAGATGTGGTTCTT | + |
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Preference number: 3 (lower is better) Translates to: ILIKVISLTDTI*DLQISESDVVL Trigger: AAGAACCACATCTGATTCTGAAATCTGGAGATCCCAGATGGTGTCAGTCAGTGAAATGACCTTGATCAGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| 3UTR GCA 72 bp | TTTATTTGGGGAAAGCAAAGGGTCAAAAGGAAGCTTTaGTTGAACATGCATATGAGTGTGTGTGTGTCAGCA | + |
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Preference number: 3 (lower is better) Translates to: FIWGKQRVKRKL*LNMHMSVCVSA Trigger: TGCTGACACACACACACTCATATGCATGTTCAAGCAAAGCTTCCTTTTGACCCTTTGCTTTCCCCAAATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| CDS-3UTR GCA 90 bp | CATGGGAAGGCTAGAGCCAGGATGTACTCAGACCTCAGTTCTCCTTCCTCTGGGGGACCCAAGCGAGGATaGTTCCCGGCTGGGGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: HGKARARMYSDLSSPSSGGPKRG*FPAGVP Trigger: TGGGACCCCAGCCGGGAAGCATCCTCGCTTGGGTCC...CCCAGAGGAAGGAGAACTGAGGTCTGAGTACATCCTGGCTCTAGCCTTCCCATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| CDS-3UTR TCA 90 bp | TGTTGCCAGAAACTCGAAGGTGAGGGTACTGGCCTGTTAGCCTGGAGCAGGCAGCTCAGAAGAGACAGGTaGGGAGTCCGGGAGGCATGG | + |
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Preference number: 4 (lower is better) Translates to: CCQKLEGEGTGLLAWSRQLRRDR*GVREAW Trigger: CCATGCCTCCCGGACTCCTCACCTGTCTCTTCTGAG...CTGCCTGCTCCAGGCTAACAGGCCAGTACCCTCACCTTCGAGTTTCTGGCAACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| CDS-3UTR TCA 90 bp | TCCCAGTTTGTGCAGGGTGAGCAGGGATGGGTTACAACCAAACAGTCTGCTAGTCCAGCAGCCCAACGCTaGGCATGGGCCTGGCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: SQFVQGEQGWVTTKQSASPAAQR*AWAWPE Trigger: CTCTGGCCAGGCCCATGCTCAGCGTTGGGCTGCTGG...ACTAGCAGACTGTTTGGTTGTAACCCATCCCTGCTCACCCTGCACAAACTGGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| CDS-3UTR TCA 90 bp | GTGACTCAGGGCTGGATTCAACCCCATCTTCCCTTCCTATCCCACACAAGGGCCGGGACCGGACTGAATTaGGTGGAGCTGAGGAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: VTQGWIQPHLPFLSHTRAGTGLN*VELRSC Trigger: GCAGCTCCTCAGCTCCACTCAATTCAGTCCGGTCCC...GGCCCTTGTGTGGGATAGGAAGGGAAGATGGGGTTGAATCCAGCCCTGAGTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| CDS-3UTR CCA 90 bp | GTGACTCAGGGCTGGATTCAACCCCATCTTCCCTTCCTATCCCACACAAGGGCCGCTGGGAACCAGAAGTaGACCTGTGGCTCCCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: VTQGWIQPHLPFLSHTRAAGNQK*TCGSQR Trigger: CCTCTGGGAGCCACAGGTCCACTTCTGGTTCCCAGC...GGCCCTTGTGTGGGATAGGAAGGGAAGATGGGGTTGAATCCAGCCCTGAGTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| CDS-3UTR TCA 90 bp | GTGACTCAGGGCTGGATTCAACCCCATCTTCCCTTCCTATCCCACACAAGGGCCAGGGAGGCGTCACTTTaGAGAATCTCCTGGCGGGGT | + |
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Preference number: 4 (lower is better) Translates to: VTQGWIQPHLPFLSHTRAREASL*RISWRG Trigger: ACCCCGCCAGGAGATTCTTCAAAGTGACGCCTCCCT...GGCCCTTGTGTGGGATAGGAAGGGAAGATGGGGTTGAATCCAGCCCTGAGTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| CDS-3UTR TCA 90 bp | ATGTGTAAACTCAGAGCTGGGGTGGTGTCTACATATGGTCAGAAGCTGAACCCCCCAGCAGCCCAACGCTaGGCATGGGCCTGGCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: MCKLRAGVVSTYGQKLNPPAAQR*AWAWPE Trigger: CTCTGGCCAGGCCCATGCTCAGCGTTGGGCTGCTGG...GGGGTTCAGCTTCTGACCATATGTAGACACCACCCCAGCTCTGAGTTTACACAT 58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| CDS-3UTR CCA 90 bp | GACTCAGGGCTGGATTCAACCCCATCTTCCCTTCCTATCCCACACAAGGGCCGGGCCCACACATACAGCTaGGAACCAGAAGTGGACCTG | + |
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Preference number: 4 (lower is better) Translates to: DSGLDSTPSSLPIPHKGRAHTYS*EPEVDL Trigger: CAGGTCCACTTCTGGTTCCCAGCTGTATGTGTGGGC...CCGGCCCTTGTGTGGGATAGGAAGGGAAGATGGGGTTGAATCCAGCCCTGAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| CDS-3UTR CCA 90 bp | AGGCAGACAGTGTTTCCCAGTTTGTGCAGGGTGAGCAGGGATGGGTTACAACCAGGAGCCTTTGGCCACTaGGACAGGGGGTACCCCACA | + |
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Preference number: 4 (lower is better) Translates to: RQTVFPSLCRVSRDGLQPGAFGH*DRGYPT Trigger: TGTGGGGTACCCCCTGTCCCAGTGGCCAAAGGCTCC...TGGTTGTAACCCATCCCTGCTCACCCTGCACAAACTGGGAAACACTGTCTGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| CDS-3UTR CCA 90 bp | TGTTGCCAGAAACTCGAAGGTGAGGGTACTGGCCTGTTAGCCTGGAGCAGGCAGCCATCCTGGGAAACCTaGTCCTGCCCAAGGTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: CCQKLEGEGTGLLAWSRQPSWET*SCPRLE Trigger: CTCCAACCTTGGGCAGGACCAGGTTTCCCAGGATGG...CTGCCTGCTCCAGGCTAACAGGCCAGTACCCTCACCTTCGAGTTTCTGGCAACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| CDS-3UTR TCA 90 bp | CATGGGAAGGCTAGAGCCAGGATGTACTCAGACCTCAGTTCTCCTTCCTCTGGGAGGGAGGCGTCACTTTaGAGAATCTCCTGGCGGGGT | + |
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Preference number: 4 (lower is better) Translates to: HGKARARMYSDLSSPSSGREASL*RISWRG Trigger: ACCCCGCCAGGAGATTCTTCAAAGTGACGCCTCCCT...CCCAGAGGAAGGAGAACTGAGGTCTGAGTACATCCTGGCTCTAGCCTTCCCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| CDS-3UTR GCA 90 bp | GACTCAGGGCTGGATTCAACCCCATCTTCCCTTCCTATCCCACACAAGGGCCGGGTGGAGCTGAGGAGCTaGATAGAGGATCCCTCTCAT | + |
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Preference number: 4 (lower is better) Translates to: DSGLDSTPSSLPIPHKGRVELRS*IEDPSH Trigger: ATGAGAGGGATCCTCTATGCAGCTCCTCAGCTCCAC...CCGGCCCTTGTGTGGGATAGGAAGGGAAGATGGGGTTGAATCCAGCCCTGAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| CDS-3UTR CCA 90 bp | TCCCAGTTTGTGCAGGGTGAGCAGGGATGGGTTACAACCAAACAGTCTGCTAGTGGAGCCTTTGGCCACTaGGACAGGGGGTACCCCACA | + |
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Preference number: 4 (lower is better) Translates to: SQFVQGEQGWVTTKQSASGAFGH*DRGYPT Trigger: TGTGGGGTACCCCCTGTCCCAGTGGCCAAAGGCTCC...ACTAGCAGACTGTTTGGTTGTAACCCATCCCTGCTCACCCTGCACAAACTGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| CDS-3UTR CCA 90 bp | CATGGGAAGGCTAGAGCCAGGATGTACTCAGACCTCAGTTCTCCTTCCTCTGGGCTTCCTCTGGACCCATaGGCTCATCCTCGGGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: HGKARARMYSDLSSPSSGLPLDP*AHPRGS Trigger: AGAACCCCGAGGATGAGCCCATGGGTCCAGAGGAAG...CCCAGAGGAAGGAGAACTGAGGTCTGAGTACATCCTGGCTCTAGCCTTCCCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| CDS-3UTR GCA 90 bp | CATGGGAAGGCTAGAGCCAGGATGTACTCAGACCTCAGTTCTCCTTCCTCTGGGTGGGAAACCTGGTCCTaGCCAAGGTTGGAGTCGTTC | + |
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Preference number: 4 (lower is better) Translates to: HGKARARMYSDLSSPSSGWETWS*PRLESF Trigger: GAACGACTCCAACCTTGGGCAGGACCAGGTTTCCCA...CCCAGAGGAAGGAGAACTGAGGTCTGAGTACATCCTGGCTCTAGCCTTCCCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| CDS-3UTR CCA 90 bp | GTGACTCAGGGCTGGATTCAACCCCATCTTCCCTTCCTATCCCACACAAGGGCCACCAGTAAGGACTTCTaGGGCCTGCCTCCTACTAAG | + |
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Preference number: 4 (lower is better) Translates to: VTQGWIQPHLPFLSHTRATSKDF*GLPPTK Trigger: CTTAGTAGGAGGCAGGCCCCAGAAGTCCTTACTGGT...GGCCCTTGTGTGGGATAGGAAGGGAAGATGGGGTTGAATCCAGCCCTGAGTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| CDS-3UTR CCA 90 bp | GACTCAGGGCTGGATTCAACCCCATCTTCCCTTCCTATCCCACACAAGGGCCGGTCTAAAGCTGTGGCTTaGGGCAGAAGCAGAAGAGAC | + |
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Preference number: 4 (lower is better) Translates to: DSGLDSTPSSLPIPHKGRSKAVA*GRSRRD Trigger: GTCTCTTCTGCTTCTGCCCCAAGCCACAGCTTTAGA...CCGGCCCTTGTGTGGGATAGGAAGGGAAGATGGGGTTGAATCCAGCCCTGAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| CDS-3UTR CCA 90 bp | AAACTCAGAGCTGGGGTGGTGTCTACATATGGTCAGAAGCTGAACCCCCTGAGCTTCCCGTACTGGTTCTaGGTCCCGTTTCCCGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KLRAGVVSTYGQKLNPLSFPYWF*VPFPEG Trigger: TCCCTCGGGAAACGGGACCCAGAACCAGTACGGGAA...GCTCAGGGGGTTCAGCTTCTGACCATATGTAGACACCACCCCAGCTCTGAGTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS-3UTR CCA 90 bp | TCCCAGTTTGTGCAGGGTGAGCAGGGATGGGTTACAACCAAACAGTCTGCTAGTTCCCACGCAGACCCATaGGGGCTCAGGAAGTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: SQFVQGEQGWVTTKQSASSHADP*GLRKSI Trigger: GATGGACTTCCTGAGCCCCCATGGGTCTGCGTGGGA...ACTAGCAGACTGTTTGGTTGTAACCCATCCCTGCTCACCCTGCACAAACTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS-3UTR CCA 90 bp | ATGTGTAAACTCAGAGCTGGGGTGGTGTCTACATATGGTCAGAAGCTGAACCCCAGGATGCTTCCCGGCTaGGGTCCCACGCAGACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: MCKLRAGVVSTYGQKLNPRMLPG*GPTQTH Trigger: ATGGGTCTGCGTGGGACCCCAGCCGGGAAGCATCCT...GGGGTTCAGCTTCTGACCATATGTAGACACCACCCCAGCTCTGAGTTTACACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS-3UTR TCA 90 bp | TACTGGCCTGTTAGCCTGGAGCAGGCAGGATTAAAAGAGAGGCAGACAGTGTTTGCTGCCAGATGTCCTTaGAAGGGGGCCTCTTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: YWPVSLEQAGLKERQTVFAARCP*KGASSG Trigger: GCCAGAAGAGGCCCCCTTTCAAGGACATCTGGCAGC...AAACACTGTCTGCCTCTCTTTTAATCCTGCCTGCTCCAGGCTAACAGGCCAGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS-3UTR TCA 90 bp | AGGCAGACAGTGTTTCCCAGTTTGTGCAGGGTGAGCAGGGATGGGTTACAACCACCAGAGCCACACTGCTaGCCTTGCAATGACCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RQTVFPSLCRVSRDGLQPPEPHC*PCNDLH Trigger: GTGAAGGTCATTGCAAGGTCAGCAGTGTGGCTCTGG...TGGTTGTAACCCATCCCTGCTCACCCTGCACAAACTGGGAAACACTGTCTGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206325.2 |
||
| CDS-3UTR CCA 90 bp | TCCCAGTTTGTGCAGGGTGAGCAGGGATGGGTTACAACCAAACAGTCTGCTAGTCCAGAAGTGGACCTGTaGCTCCCAGAGGACCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SQFVQGEQGWVTTKQSASPEVDL*LPEDLF Trigger: GAACAGGTCCTCTGGGAGCCACAGGTCCACTTCTGG...ACTAGCAGACTGTTTGGTTGTAACCCATCCCTGCTCACCCTGCACAAACTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS-3UTR CCA 90 bp | AGGCAGACAGTGTTTCCCAGTTTGTGCAGGGTGAGCAGGGATGGGTTACAACCAGCCCACACATACAGCTaGGAACCAGAAGTGGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: RQTVFPSLCRVSRDGLQPAHTYS*EPEVDL Trigger: CAGGTCCACTTCTGGTTCCCAGCTGTATGTGTGGGC...TGGTTGTAACCCATCCCTGCTCACCCTGCACAAACTGGGAAACACTGTCTGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS-3UTR CCA 90 bp | AGGCAGACAGTGTTTCCCAGTTTGTGCAGGGTGAGCAGGGATGGGTTACAACCAGGAGTCTTCTTCCTCTaGACCCATGGGCTCATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RQTVFPSLCRVSRDGLQPGVFFL*THGLIL Trigger: GAGGATGAGCCCATGGGTCCAGAGGAAGAAGACTCC...TGGTTGTAACCCATCCCTGCTCACCCTGCACAAACTGGGAAACACTGTCTGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS-3UTR CCA 90 bp | AAACTCAGAGCTGGGGTGGTGTCTACATATGGTCAGAAGCTGAACCCCCTGAGCGGAGTCTTCTTCCTCTaGACCCATGGGCTCATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KLRAGVVSTYGQKLNPLSGVFFL*THGLIL Trigger: GAGGATGAGCCCATGGGTCCAGAGGAAGAAGACTCC...GCTCAGGGGGTTCAGCTTCTGACCATATGTAGACACCACCCCAGCTCTGAGTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS-3UTR CCA 90 bp | ATGTGTAAACTCAGAGCTGGGGTGGTGTCTACATATGGTCAGAAGCTGAACCCCTCCCACGCAGACCCATaGGGGCTCAGGAAGTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: MCKLRAGVVSTYGQKLNPSHADP*GLRKSI Trigger: GATGGACTTCCTGAGCCCCCATGGGTCTGCGTGGGA...GGGGTTCAGCTTCTGACCATATGTAGACACCACCCCAGCTCTGAGTTTACACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS-3UTR GCA 90 bp | CATGGGAAGGCTAGAGCCAGGATGTACTCAGACCTCAGTTCTCCTTCCTCTGGGATGGCAGCACAACATTaGCTCCCTCTTCTACCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HGKARARMYSDLSSPSSGMAAQH*LPLLPP Trigger: TGGAGGTAGAAGAGGGAGGCAATGTTGTGCTGCCAT...CCCAGAGGAAGGAGAACTGAGGTCTGAGTACATCCTGGCTCTAGCCTTCCCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS-3UTR CCA 90 bp | TCCCAGTTTGTGCAGGGTGAGCAGGGATGGGTTACAACCAAACAGTCTGCTAGTCTCCTAGGATGCACATaGGTCCAGGAGATGGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SQFVQGEQGWVTTKQSASLLGCT*VQEMEP Trigger: AGGCTCCATCTCCTGGACCCATGTGCATCCTAGGAG...ACTAGCAGACTGTTTGGTTGTAACCCATCCCTGCTCACCCTGCACAAACTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS-3UTR CCA 90 bp | TACTGGCCTGTTAGCCTGGAGCAGGCAGGATTAAAAGAGAGGCAGACAGTGTTTCCATCCTGGGAAACCTaGTCCTGCCCAAGGTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: YWPVSLEQAGLKERQTVFPSWET*SCPRLE Trigger: CTCCAACCTTGGGCAGGACCAGGTTTCCCAGGATGG...AAACACTGTCTGCCTCTCTTTTAATCCTGCCTGCTCCAGGCTAACAGGCCAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS-3UTR CCA 90 bp | CATCTGGGATCTCCAGATTTCAGAATCAGATGTGGTTCTTGGGACCTAACGAAGAGGATGCTTCCCGGCTaGGGTCCCACGCAGACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: HLGSPDFRIRCGSWDLTKRMLPG*GPTQTH Trigger: ATGGGTCTGCGTGGGACCCCAGCCGGGAAGCATCCT...CTTCGTTAGGTCCCAAGAACCACATCTGATTCTGAAATCTGGAGATCCCAGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS-3UTR CCA 90 bp | CTGGACATATTTGCATCACTGGATGTTAGGTGGCTAAATGCCAGGCCATGGGAACCCCAAGTCCCCATGTaGCCCTCTCCTTCCCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: LDIFASLDVRWLNARPWEPQVPM*PSPSHA Trigger: AGCATGGGAAGGAGAGGGCCACATGGGGACTTGGGG...TTCCCATGGCCTGGCATTTAGCCACCTAACATCCAGTGATGCAAATATGTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS-3UTR TCA 90 bp | CATCTGGGATCTCCAGATTTCAGAATCAGATGTGGTTCTTGGGACCTAACGAAGCTCAGAAGAGACAGGTaGGGAGTCCGGGAGGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: HLGSPDFRIRCGSWDLTKLRRDR*GVREAW Trigger: CCATGCCTCCCGGACTCCTCACCTGTCTCTTCTGAG...CTTCGTTAGGTCCCAAGAACCACATCTGATTCTGAAATCTGGAGATCCCAGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS-3UTR GCA 90 bp | ATGTGTAAACTCAGAGCTGGGGTGGTGTCTACATATGGTCAGAAGCTGAACCCCACTGTCCAGGCAGGCTaGCAGATGTCCTTGAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: MCKLRAGVVSTYGQKLNPTVQAG*QMSLKG Trigger: CCCTTTCAAGGACATCTGGCAGCCTGCCTGGACAGT...GGGGTTCAGCTTCTGACCATATGTAGACACCACCCCAGCTCTGAGTTTACACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS-3UTR GCA 90 bp | TGTTGCCAGAAACTCGAAGGTGAGGGTACTGGCCTGTTAGCCTGGAGCAGGCAGTATCCTGGACTTGAATaGGTGGATTTCCATAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: CCQKLEGEGTGLLAWSRQYPGLE*VDFHRT Trigger: GGTCCTATGGAAATCCACGCATTCAAGTCCAGGATA...CTGCCTGCTCCAGGCTAACAGGCCAGTACCCTCACCTTCGAGTTTCTGGCAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS-3UTR GCA 90 bp | TACTGGCCTGTTAGCCTGGAGCAGGCAGGATTAAAAGAGAGGCAGACAGTGTTTGGAAGTCCATCATCCTaGCAACTGGTTGGGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: YWPVSLEQAGLKERQTVFGSPSS*QLVGPA Trigger: AGCTGGCCCAACCAGTTGGCAGGATGATGGACTTCC...AAACACTGTCTGCCTCTCTTTTAATCCTGCCTGCTCCAGGCTAACAGGCCAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS-3UTR CCA 90 bp | TCCCAGTTTGTGCAGGGTGAGCAGGGATGGGTTACAACCAAACAGTCTGCTAGTACCAGTAAGGACTTCTaGGGCCTGCCTCCTACTAAG | + |
|
Preference number: 4 (lower is better) Translates to: SQFVQGEQGWVTTKQSASTSKDF*GLPPTK Trigger: CTTAGTAGGAGGCAGGCCCCAGAAGTCCTTACTGGT...ACTAGCAGACTGTTTGGTTGTAACCCATCCCTGCTCACCCTGCACAAACTGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS-3UTR CCA 90 bp | CATGGGAAGGCTAGAGCCAGGATGTACTCAGACCTCAGTTCTCCTTCCTCTGGGGGTCCTGCCCAAGGTTaGAGTCGTTCTCATAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: HGKARARMYSDLSSPSSGGPAQG*SRSHRI Trigger: AATTCTATGAGAACGACTCCAACCTTGGGCAGGACC...CCCAGAGGAAGGAGAACTGAGGTCTGAGTACATCCTGGCTCTAGCCTTCCCATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS-3UTR CCA 90 bp | ATGTGTAAACTCAGAGCTGGGGTGGTGTCTACATATGGTCAGAAGCTGAACCCCATCCTGCCAACTGGTTaGGCCAGCTCCTCATCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: MCKLRAGVVSTYGQKLNPILPTG*ASSSSA Trigger: TGCAGATGAGGAGCTGGCCCAACCAGTTGGCAGGAT...GGGGTTCAGCTTCTGACCATATGTAGACACCACCCCAGCTCTGAGTTTACACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS-3UTR CCA 90 bp | ATCTCCAGATTTCAGAATCAGATGTGGTTCTTGGGACCTAACGAAGTCCAGGCTCCCCAAGTCCCCATGTaGCCCTCTCCTTCCCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: ISRFQNQMWFLGPNEVQAPQVPM*PSPSHA Trigger: AGCATGGGAAGGAGAGGGCCACATGGGGACTTGGGG...AGCCTGGACTTCGTTAGGTCCCAAGAACCACATCTGATTCTGAAATCTGGAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS-3UTR TCA 90 bp | CTGGACATATTTGCATCACTGGATGTTAGGTGGCTAAATGCCAGGCCATGGGAACAGCCAGAGCCACACTaGCCTTGCAATGACCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LDIFASLDVRWLNARPWEQPEPH*PCNDLH Trigger: GTGAAGGTCATTGCAAGGTCAGTGTGGCTCTGGCTG...TTCCCATGGCCTGGCATTTAGCCACCTAACATCCAGTGATGCAAATATGTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032968.7 |
||
| CDS-3UTR GCA 90 bp | CTGGACATATTTGCATCACTGGATGTTAGGTGGCTAAATGCCAGGCCATGGGAAGGAAGTCCATCATCCTaGCAACTGGTTGGGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LDIFASLDVRWLNARPWEGSPSS*QLVGPA Trigger: AGCTGGCCCAACCAGTTGGCAGGATGATGGACTTCC...TTCCCATGGCCTGGCATTTAGCCACCTAACATCCAGTGATGCAAATATGTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS-3UTR GCA 90 bp | ATGTGTAAACTCAGAGCTGGGGTGGTGTCTACATATGGTCAGAAGCTGAACCCCGTGGAGCTGAGGAGCTaGATAGAGGATCCCTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: MCKLRAGVVSTYGQKLNPVELRS*IEDPSH Trigger: ATGAGAGGGATCCTCTATGCAGCTCCTCAGCTCCAC...GGGGTTCAGCTTCTGACCATATGTAGACACCACCCCAGCTCTGAGTTTACACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS-3UTR CCA 90 bp | CATCTGGGATCTCCAGATTTCAGAATCAGATGTGGTTCTTGGGACCTAACGAAGCCAGAAGTGGACCTGTaGCTCCCAGAGGACCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HLGSPDFRIRCGSWDLTKPEVDL*LPEDLF Trigger: GAACAGGTCCTCTGGGAGCCACAGGTCCACTTCTGG...CTTCGTTAGGTCCCAAGAACCACATCTGATTCTGAAATCTGGAGATCCCAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS-3UTR CCA 90 bp | CATCTGGGATCTCCAGATTTCAGAATCAGATGTGGTTCTTGGGACCTAACGAAGTTCCCGTACTGGTTCTaGGTCCCGTTTCCCGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: HLGSPDFRIRCGSWDLTKFPYWF*VPFPEG Trigger: TCCCTCGGGAAACGGGACCCAGAACCAGTACGGGAA...CTTCGTTAGGTCCCAAGAACCACATCTGATTCTGAAATCTGGAGATCCCAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS-3UTR CCA 90 bp | ATCTCCAGATTTCAGAATCAGATGTGGTTCTTGGGACCTAACGAAGTCCAGGCTCTTCCTCTGGACCCATaGGCTCATCCTCGGGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ISRFQNQMWFLGPNEVQALPLDP*AHPRGS Trigger: AGAACCCCGAGGATGAGCCCATGGGTCCAGAGGAAG...AGCCTGGACTTCGTTAGGTCCCAAGAACCACATCTGATTCTGAAATCTGGAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| 3UTR CAA 72 bp | ACCAAACAGTCTGCTAGTCCCATCACTGTCTCTCCCTaGTGGGACACCATGGAATGTAGCGGCTGGACATAT | + |
|
Preference number: 4 (lower is better) Translates to: TKQSASPITVSP*WDTMECSGWTY Trigger: ATATGTCCAGCCGCTACATTCCATGGTGTCCCACAAGGGAGAGACAGTGATGGGACTAGCAGACTGTTTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS-3UTR GCA 90 bp | TACTGGCCTGTTAGCCTGGAGCAGGCAGGATTAAAAGAGAGGCAGACAGTGTTTATGGCAGCACAACATTaGCTCCCTCTTCTACCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: YWPVSLEQAGLKERQTVFMAAQH*LPLLPP Trigger: TGGAGGTAGAAGAGGGAGGCAATGTTGTGCTGCCAT...AAACACTGTCTGCCTCTCTTTTAATCCTGCCTGCTCCAGGCTAACAGGCCAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS-3UTR GCA 90 bp | AAACTCAGAGCTGGGGTGGTGTCTACATATGGTCAGAAGCTGAACCCCCTGAGCTATCCTGGACTTGAATaGGTGGATTTCCATAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: KLRAGVVSTYGQKLNPLSYPGLE*VDFHRT Trigger: GGTCCTATGGAAATCCACGCATTCAAGTCCAGGATA...GCTCAGGGGGTTCAGCTTCTGACCATATGTAGACACCACCCCAGCTCTGAGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS-3UTR GCA 90 bp | ATCTCCAGATTTCAGAATCAGATGTGGTTCTTGGGACCTAACGAAGTCCAGGCTTGGGAAACCTGGTCCTaGCCAAGGTTGGAGTCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ISRFQNQMWFLGPNEVQAWETWS*PRLESF Trigger: GAACGACTCCAACCTTGGGCAGGACCAGGTTTCCCA...AGCCTGGACTTCGTTAGGTCCCAAGAACCACATCTGATTCTGAAATCTGGAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS-3UTR CCA 90 bp | ATCTCCAGATTTCAGAATCAGATGTGGTTCTTGGGACCTAACGAAGTCCAGGCTCTCCTAGGATGCACATaGGTCCAGGAGATGGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ISRFQNQMWFLGPNEVQALLGCT*VQEMEP Trigger: AGGCTCCATCTCCTGGACCCATGTGCATCCTAGGAG...AGCCTGGACTTCGTTAGGTCCCAAGAACCACATCTGATTCTGAAATCTGGAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS-3UTR CCA 90 bp | ATCTCCAGATTTCAGAATCAGATGTGGTTCTTGGGACCTAACGAAGTCCAGGCTATCCTGCCAACTGGTTaGGCCAGCTCCTCATCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ISRFQNQMWFLGPNEVQAILPTG*ASSSSA Trigger: TGCAGATGAGGAGCTGGCCCAACCAGTTGGCAGGAT...AGCCTGGACTTCGTTAGGTCCCAAGAACCACATCTGATTCTGAAATCTGGAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| 3UTR CAA 72 bp | GCAGGATTAAAAGAGAGGCAGACAGTGTTTCCCAGTTaGTGCAGGGTGAGCAGGGATGGGTTACAACCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: AGLKERQTVFPS*CRVSRDGLQPN Trigger: GTTTGGTTGTAACCCATCCCTGCTCACCCTGCACAAACTGGGAAACACTGTCTGCCTCTCTTTTAATCCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS-3UTR CCA 90 bp | AAACTCAGAGCTGGGGTGGTGTCTACATATGGTCAGAAGCTGAACCCCCTGAGCCATAAGACTCAGCATTaGAGAAGGAGTCTTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KLRAGVVSTYGQKLNPLSHKTQH*RRSLLP Trigger: AGGAAGAAGACTCCTTCTCCAATGCTGAGTCTTATG...GCTCAGGGGGTTCAGCTTCTGACCATATGTAGACACCACCCCAGCTCTGAGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| 3UTR CAA 72 bp | TCTGGGATCTCCAGATTTCAGAATCAGATGTGGTTCTaGGGACCTAACGAAGTCCAGGCTAGTCACTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SGISRFQNQMWF*GPNEVQASHLG Trigger: TCCCAAGTGACTAGCCTGGACTTCGTTAGGTCCCAAGAACCACATCTGATTCTGAAATCTGGAGATCCCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS-3UTR GCA 90 bp | CATCTGGGATCTCCAGATTTCAGAATCAGATGTGGTTCTTGGGACCTAACGAAGTTAGGTCTCCTAGGATaGACATGGGTCCAGGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: HLGSPDFRIRCGSWDLTKLGLLG*TWVQEM Trigger: CATCTCCTGGACCCATGTGCATCCTAGGAGACCTAA...CTTCGTTAGGTCCCAAGAACCACATCTGATTCTGAAATCTGGAGATCCCAGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS-3UTR TCA 90 bp | ATGTGTAAACTCAGAGCTGGGGTGGTGTCTACATATGGTCAGAAGCTGAACCCCTATGGTCTGAGACATTaGCAATCACTAGCAAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: MCKLRAGVVSTYGQKLNPYGLRH*QSLARC Trigger: GCATCTTGCTAGTGATTGTCAATGTCTCAGACCATA...GGGGTTCAGCTTCTGACCATATGTAGACACCACCCCAGCTCTGAGTTTACACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS-3UTR GCA 90 bp | AAAGCAAAGGGTCAAAAGGAAGCTTTGCTTGAACATGCATATGAGTGTGTGTGTACTGTCCAGGCAGGCTaGCAGATGTCCTTGAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KAKGQKEALLEHAYECVCTVQAG*QMSLKG Trigger: CCCTTTCAAGGACATCTGGCAGCCTGCCTGGACAGT...ACACACACACTCATATGCATGTTCAAGCAAAGCTTCCTTTTGACCCTTTGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS-3UTR CCA 90 bp | CATCTGGGATCTCCAGATTTCAGAATCAGATGTGGTTCTTGGGACCTAACGAAGCTTCATCTAAAGCTGTaGCTTGGGGCAGAAGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HLGSPDFRIRCGSWDLTKLHLKL*LGAEAE Trigger: TTCTGCTTCTGCCCCAAGCCACAGCTTTAGATGAAG...CTTCGTTAGGTCCCAAGAACCACATCTGATTCTGAAATCTGGAGATCCCAGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS-3UTR CCA 90 bp | CATCTGGGATCTCCAGATTTCAGAATCAGATGTGGTTCTTGGGACCTAACGAAGGGTCCTGCCCAAGGTTaGAGTCGTTCTCATAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: HLGSPDFRIRCGSWDLTKGPAQG*SRSHRI Trigger: AATTCTATGAGAACGACTCCAACCTTGGGCAGGACC...CTTCGTTAGGTCCCAAGAACCACATCTGATTCTGAAATCTGGAGATCCCAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS-3UTR TCA 90 bp | CATCTGGGATCTCCAGATTTCAGAATCAGATGTGGTTCTTGGGACCTAACGAAGTATGGTCTGAGACATTaGCAATCACTAGCAAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: HLGSPDFRIRCGSWDLTKYGLRH*QSLARC Trigger: GCATCTTGCTAGTGATTGTCAATGTCTCAGACCATA...CTTCGTTAGGTCCCAAGAACCACATCTGATTCTGAAATCTGGAGATCCCAGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS-3UTR CCA 90 bp | AAAGCAAAGGGTCAAAAGGAAGCTTTGCTTGAACATGCATATGAGTGTGTGTGTTCTAAAGCTGTGGCTTaGGGCAGAAGCAGAAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: KAKGQKEALLEHAYECVCSKAVA*GRSRRD Trigger: GTCTCTTCTGCTTCTGCCCCAAGCCACAGCTTTAGA...ACACACACACTCATATGCATGTTCAAGCAAAGCTTCCTTTTGACCCTTTGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| 3UTR CAA 72 bp | GTTTATTTGGGGAAAGCAAAGGGTCAAAAGGAAGCTTaGCTTGAACATGCATATGAGTGTGTGTGTGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VYLGKAKGQKEA*LEHAYECVCVS Trigger: GCTGACACACACACACTCATATGCATGTTCAAGCAAAGCTTCCTTTTGACCCTTTGCTTTCCCCAAATAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS-3UTR CCA 90 bp | AAAGCAAAGGGTCAAAAGGAAGCTTTGCTTGAACATGCATATGAGTGTGTGTGTCATAAGACTCAGCATTaGAGAAGGAGTCTTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KAKGQKEALLEHAYECVCHKTQH*RRSLLP Trigger: AGGAAGAAGACTCCTTCTCCAATGCTGAGTCTTATG...ACACACACACTCATATGCATGTTCAAGCAAAGCTTCCTTTTGACCCTTTGCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS CCA 90 bp | GACCCAAGCGAGGATGCTTCCCGGCTGGGGTCCCACGCAGACCCATaGGGGCTCAGGAAGTCCATCATCCTGCCAACTGGTTGGGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: DPSEDASRLGSHADP*GLRKSIILPTGWAS Trigger: GCTGGCCCAACCAGTTGGCAGGATGATGGACTTCCTGAGCCCCCATGGGTCTGCGTGGGACCCCAGCCGGGAAGCATCCTCGCTTGGGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS CCA 90 bp | TCATATCTTCATAGGACTGGGACCCAAGCGAGGATGCTTCCCGGCTaGGGTCCCACGCAGACCCATGGGGGCTCAGGAAGTCCATCATCC | + |
|
Preference number: 5 (lower is better) Translates to: SYLHRTGTQARMLPG*GPTQTHGGSGSPSS Trigger: GGATGATGGACTTCCTGAGCCCCCATGGGTCTGCGTGGGACCCCAGCCGGGAAGCATCCTCGCTTGGGTCCCAGTCCTATGAAGATATGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS-3UTR CAA 90 bp | GTGACTCAGGGCTGGATTCAACCCCATCTTCCCTTCCTATCCCACACAAGGGCCGGCTGCCAGATGTCCTaGAAAGGGGGCCTCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VTQGWIQPHLPFLSHTRAGCQMS*KGGLFW Trigger: CCAGAAGAGGCCCCCTTTCAAGGACATCTGGCAGCC...GGCCCTTGTGTGGGATAGGAAGGGAAGATGGGGTTGAATCCAGCCCTGAGTCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS-3UTR CAA 90 bp | AAACTCAGAGCTGGGGTGGTGTCTACATATGGTCAGAAGCTGAACCCCCTGAGCCAGGAGATGGAGCCTTaGGCCACTGGGACAGGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: KLRAGVVSTYGQKLNPLSQEMEP*ATGTGG Trigger: ACCCCCTGTCCCAGTGGCCAAAGGCTCCATCTCCTG...GCTCAGGGGGTTCAGCTTCTGACCATATGTAGACACCACCCCAGCTCTGAGTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS TCA 90 bp | TGTGGCTCCCAGAGGACCTGTTCCTTAGGTCACAGTCCAGGTCCCTaGCGTCTGAAGCATTCCACCGGAACATCTCCCCACTATCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: CGSQRTCSLGHSPGP*RLKHSTGTSPHYPP Trigger: TGGAGGATAGTGGGGAGATGTTCCGGTGGAATGCTTCAGACGTCAGGGACCTGGACTGTGACCTAAGGAACAGGTCCTCTGGGAGCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS GCA 90 bp | CCCCCAAGGCTTAGGCTCAGTAGTGAAACATTAGGTCTCCTAGGATaGACATGGGTCCAGGAGATGGAGCCTTTGGCCACTGGGACAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PPRLRLSSETLGLLG*TWVQEMEPLATGTG Trigger: CCCTGTCCCAGTGGCCAAAGGCTCCATCTCCTGGACCCATGTGCATCCTAGGAGACCTAATGTTTCACTACTGAGCCTAAGCCTTGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS CCA 90 bp | TGGTCTTTAGCCCACACATACAGCTGGGAACCAGAAGTGGACCTGTaGCTCCCAGAGGACCTGTTCCTTAGGTCACAGTCCAGGTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: WSLAHTYSWEPEVDL*LPEDLFLRSQSRSL Trigger: CAGGGACCTGGACTGTGACCTAAGGAACAGGTCCTCTGGGAGCCACAGGTCCACTTCTGGTTCCCAGCTGTATGTGTGGGCTAAAGACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS CCA 90 bp | GCCTGGCCAGAGGTAGATGTAGGAAGGGAGAGCACATTCCCGTACTaGTTCTGGGTCCCGTTTCCCGAGGGAGGCGTCACTTTGAAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: AWPEVDVGRESTFPY*FWVPFPEGGVTLKN Trigger: ATTCTTCAAAGTGACGCCTCCCTCGGGAAACGGGACCCAGAACCAGTACGGGAATGTGCTCTCCCTTCCTACATCTACCTCTGGCCAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS GCA 90 bp | GGCAGAAGCAGAAGAGACCCCCAAACCCACATCTCTCTGACCGGGTaGTCTCCCCCAAGGCTTAGGCTCAGTAGTGAAACATTAGGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: GRSRRDPQTHISLTG*SPPRLRLSSETLGL Trigger: GAGACCTAATGTTTCACTACTGAGCCTAAGCCTTGGGGGAGAGCACCCGGTCAGAGAGATGTGGGTTTGGGGGTCTCTTCTGCTTCTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS CCA 90 bp | AGGCTTAGGCTCAGTAGTGAAACATTAGGTCTCCTAGGATGCACATaGGTCCAGGAGATGGAGCCTTTGGCCACTGGGACAGGGGGTACC | + |
|
Preference number: 5 (lower is better) Translates to: RLRLSSETLGLLGCT*VQEMEPLATGTGGT Trigger: GGTACCCCCTGTCCCAGTGGCCAAAGGCTCCATCTCCTGGACCCATGTGCATCCTAGGAGACCTAATGTTTCACTACTGAGCCTAAGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS CCA 90 bp | CCAGAGGTAGATGTAGGAAGGGAGAGCACATTCCCGTACTGGTTCTaGGTCCCGTTTCCCGAGGGAGGCGTCACTTTGAAGAATCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PEVDVGRESTFPYWF*VPFPEGGVTLKNLL Trigger: CAGGAGATTCTTCAAAGTGACGCCTCCCTCGGGAAACGGGACCCAGAACCAGTACGGGAATGTGCTCTCCCTTCCTACATCTACCTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS CCA 90 bp | TCTCATAGCCACTCCCATCCTGGGAAACCTGGTCCTGCCCAAGGTTaGAGTCGTTCTCATAGAATTCAGAGCCCTCCTCGCTGTCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SHSHSHPGKPGPAQG*SRSHRIQSPPRCLA Trigger: AGCCAGACAGCGAGGAGGGCTCTGAATTCTATGAGAACGACTCCAACCTTGGGCAGGACCAGGTTTCCCAGGATGGGAGTGGCTATGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS-3UTR CAA 90 bp | TCCCAGTTTGTGCAGGGTGAGCAGGGATGGGTTACAACCAAACAGTCTGCTAGTGAGGGAGGCGTCACTTaGAAGAATCTCCTGGCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SQFVQGEQGWVTTKQSASEGGVT*KNLLAG Trigger: CCCCGCCAGGAGATTCTTCAAAGTGACGCCTCCCTC...ACTAGCAGACTGTTTGGTTGTAACCCATCCCTGCTCACCCTGCACAAACTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS-3UTR CAA 90 bp | ATGTGTAAACTCAGAGCTGGGGTGGTGTCTACATATGGTCAGAAGCTGAACCCCGGCTGCCAGATGTCCTaGAAAGGGGGCCTCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: MCKLRAGVVSTYGQKLNPGCQMS*KGGLFW Trigger: CCAGAAGAGGCCCCCTTTCAAGGACATCTGGCAGCC...GGGGTTCAGCTTCTGACCATATGTAGACACCACCCCAGCTCTGAGTTTACACAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS-3UTR CAA 90 bp | CTGGACATATTTGCATCACTGGATGTTAGGTGGCTAAATGCCAGGCCATGGGAACAGGAGATGGAGCCTTaGGCCACTGGGACAGGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LDIFASLDVRWLNARPWEQEMEP*ATGTGG Trigger: ACCCCCTGTCCCAGTGGCCAAAGGCTCCATCTCCTG...TTCCCATGGCCTGGCATTTAGCCACCTAACATCCAGTGATGCAAATATGTCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS-3UTR CAA 90 bp | TCCCAGTTTGTGCAGGGTGAGCAGGGATGGGTTACAACCAAACAGTCTGCTAGTTGGGACCGGACTGAATaGAGTGGAGCTGAGGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SQFVQGEQGWVTTKQSASWDRTE*SGAEEL Trigger: CAGCTCCTCAGCTCCACTCAATTCAGTCCGGTCCCA...ACTAGCAGACTGTTTGGTTGTAACCCATCCCTGCTCACCCTGCACAAACTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS TCA 90 bp | ATCCACCAGTTCTCAACAGCCAGAGCCACACTGCTGACCTTGCAATaGCCTTCACGTGCCTCTCGATGGTCAGGTTTCCTCGGAGACAAT | + |
|
Preference number: 5 (lower is better) Translates to: IHQFSTARATLLTLQ*PSRASRWSGFLGDN Trigger: ATTGTCTCCGAGGAAACCTGACCATCGAGAGGCACGTGAAGGTCATTGCAAGGTCAGCAGTGTGGCTCTGGCTGTTGAGAACTGGTGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206325.2 |
||
| CDS CCA 90 bp | CATAAGACTCAGCATTGGAGAAGGAGTCTTCTTCCTCTGGACCCATaGGCTCATCCTCGGGGTTCTCATAGCCACTCCCATCCTGGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: HKTQHWRRSLLPLDP*AHPRGSHSHSHPGK Trigger: TTTCCCAGGATGGGAGTGGCTATGAGAACCCCGAGGATGAGCCCATGGGTCCAGAGGAAGAAGACTCCTTCTCCAATGCTGAGTCTTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS-3UTR CAA 90 bp | TCCCAGTTTGTGCAGGGTGAGCAGGGATGGGTTACAACCAAACAGTCTGCTAGTCATGGCAGCACAACATaGCCTCCCTCTTCTACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SQFVQGEQGWVTTKQSASHGSTT*PPSSTS Trigger: GGAGGTAGAAGAGGGAGGCAATGTTGTGCTGCCATG...ACTAGCAGACTGTTTGGTTGTAACCCATCCCTGCTCACCCTGCACAAACTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS-3UTR CAA 90 bp | CTGGACATATTTGCATCACTGGATGTTAGGTGGCTAAATGCCAGGCCATGGGAAGAGGGAGGCGTCACTTaGAAGAATCTCCTGGCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LDIFASLDVRWLNARPWEEGGVT*KNLLAG Trigger: CCCCGCCAGGAGATTCTTCAAAGTGACGCCTCCCTC...TTCCCATGGCCTGGCATTTAGCCACCTAACATCCAGTGATGCAAATATGTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS GCA 90 bp | TCACGTGCCTCTCGATGGTCAGGTTTCCTCGGAGACAATAATAGGTaGCTTCATCTAAAGCTGTGGCTTGGGGCAGAAGCAGAAGAGACC | + |
|
Preference number: 5 (lower is better) Translates to: SRASRWSGFLGDNNR*LHLKLWLGAEAEET Trigger: GGTCTCTTCTGCTTCTGCCCCAAGCCACAGCTTTAGATGAAGGCACCTATTATTGTCTCCGAGGAAACCTGACCATCGAGAGGCACGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS CCA 90 bp | TCAGGTTTCCTCGGAGACAATAATAGGTGCCTTCATCTAAAGCTGTaGCTTGGGGCAGAAGCAGAAGAGACCCCCAAACCCACATCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SGFLGDNNRCLHLKL*LGAEAEETPKPTSL Trigger: GAGAGATGTGGGTTTGGGGGTCTCTTCTGCTTCTGCCCCAAGCCACAGCTTTAGATGAAGGCACCTATTATTGTCTCCGAGGAAACCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS CCA 90 bp | AAGGTTGGAGTCGTTCTCATAGAATTCAGAGCCCTCCTCGCTGTCTaGCTCTTCATAGGCCTCCCCTTCTTCTTCCAGTCCTGTTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: KVGVVLIEFRALLAV*LFIGLPFFFQSCFM Trigger: CATGAAACAGGACTGGAAGAAGAAGGGGAGGCCTATGAAGAGCCAGACAGCGAGGAGGGCTCTGAATTCTATGAGAACGACTCCAACCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS CCA 90 bp | TGCATTTTCATAAGACTCAGCATTGGAGAAGGAGTCTTCTTCCTCTaGACCCATGGGCTCATCCTCGGGGTTCTCATAGCCACTCCCATC | + |
|
Preference number: 5 (lower is better) Translates to: CIFIRLSIGEGVFFL*THGLILGVLIATPI Trigger: GATGGGAGTGGCTATGAGAACCCCGAGGATGAGCCCATGGGTCCAGAGGAAGAAGACTCCTTCTCCAATGCTGAGTCTTATGAAAATGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS GCA 90 bp | CAGGAAGTCCATCATCCTGCCAACTGGTTGGGCCAGCTCCTCATCTaGATTTTCATAAGACTCAGCATTGGAGAAGGAGTCTTCTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: QEVHHPANWLGQLLI*IFIRLSIGEGVFFL Trigger: GAGGAAGAAGACTCCTTCTCCAATGCTGAGTCTTATGAAAATGCAGATGAGGAGCTGGCCCAACCAGTTGGCAGGATGATGGACTTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS-3UTR CAA 90 bp | AGGCAGACAGTGTTTCCCAGTTTGTGCAGGGTGAGCAGGGATGGGTTACAACCACAGGATAAAGGCTCTTaGACAATAGAGAAAAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: RQTVFPSLCRVSRDGLQPQDKGS*TIEKSH Trigger: GTGGCTTTTCTCTATTGTCAAAGAGCCTTTATCCTG...TGGTTGTAACCCATCCCTGCTCACCCTGCACAAACTGGGAAACACTGTCTGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS TCA 90 bp | TTCATAAGAGTCTGCATCTTCTTCATGACTGGGACCGGACTGAATTaGGTGGAGCTGAGGAGCTGCATAGAGGATCCCTCTCATATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FIRVCIFFMTGTGLN*VELRSCIEDPSHIF Trigger: GAAGATATGAGAGGGATCCTCTATGCAGCTCCTCAGCTCCACTCAATTCAGTCCGGTCCCAGTCATGAAGAAGATGCAGACTCTTATGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS-3UTR CAA 90 bp | TCCCAGTTTGTGCAGGGTGAGCAGGGATGGGTTACAACCAAACAGTCTGCTAGTCAGGATAAAGGCTCTTaGACAATAGAGAAAAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SQFVQGEQGWVTTKQSASQDKGS*TIEKSH Trigger: GTGGCTTTTCTCTATTGTCAAAGAGCCTTTATCCTG...ACTAGCAGACTGTTTGGTTGTAACCCATCCCTGCTCACCCTGCACAAACTGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS TCA 90 bp | CTCTTTGACAATAGAGAAAAGCCACCAGAGAAACCATACAGAAGATaGCATATACTAAAGTCACCACTGGGACTATCCATCCACCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LFDNREKPPEKPYRR*HILKSPLGLSIHQF Trigger: GAACTGGTGGATGGATAGTCCCAGTGGTGACTTTAGTATATGTCATCTTCTGTATGGTTTCTCTGGTGGCTTTTCTCTATTGTCAAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS CCA 72 bp | CATAGGACTGGGACCCAAGCGAGGATGCTTCCCGGCTaGGGTCCCACGCAGACCCATGGGGGCTCAGGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: HRTGTQARMLPG*GPTQTHGGSGS Trigger: ACTTCCTGAGCCCCCATGGGTCTGCGTGGGACCCCAGCCGGGAAGCATCCTCGCTTGGGTCCCAGTCCTATG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS TCA 72 bp | GACCCAGGGACACTCCCTAGGCCAGCAGCCCAACGCTaGGCATGGGCCTGGCCAGAGGTAGATGTAGGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: DPGTLPRPAAQR*AWAWPEVDVGR Trigger: CCTTCCTACATCTACCTCTGGCCAGGCCCATGCTCAGCGTTGGGCTGCTGGCCTAGGGAGTGTCCCTGGGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS CCA 72 bp | GAGGATGCTTCCCGGCTGGGGTCCCACGCAGACCCATaGGGGCTCAGGAAGTCCATCATCCTGCCAACTGGT | + |
|
Preference number: 6 (lower is better) Translates to: EDASRLGSHADP*GLRKSIILPTG Trigger: ACCAGTTGGCAGGATGATGGACTTCCTGAGCCCCCATGGGTCTGCGTGGGACCCCAGCCGGGAAGCATCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS TCA 72 bp | GCCAGGGGACCCGGGGCTCAGCTCCAGGAAGGGTGTTaGCTGGTTACCTCGATACCAAGCCAGCTTCTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: ARGPGAQLQEGC*LVTSIPSQLLR Trigger: TCTGAGAAGCTGGCTTGGTATCGAGGTAACCAGTCAACACCCTTCCTGGAGCTGAGCCCCGGGTCCCCTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS CAA 90 bp | ACATTAGGTCTCCTAGGATGCACATGGGTCCAGGAGATGGAGCCTTaGGCCACTGGGACAGGGGGTACCCCACAGGACAGCCAAAGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: TLGLLGCTWVQEMEP*ATGTGGTPQDSQSV Trigger: CACACTTTGGCTGTCCTGTGGGGTACCCCCTGTCCCAGTGGCCAAAGGCTCCATCTCCTGGACCCATGTGCATCCTAGGAGACCTAATGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS TCA 72 bp | GCAGAAGCAGAAGAGACCCCCAAACCCACATCTCTCTaGCCGGGTGCTCTCCCCCAAGGCTTAGGCTCAGTA | + |
|
Preference number: 6 (lower is better) Translates to: AEAEETPKPTSL*PGALPQGLGSV Trigger: TACTGAGCCTAAGCCTTGGGGGAGAGCACCCGGTCAGAGAGATGTGGGTTTGGGGGTCTCTTCTGCTTCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS CCA 72 bp | GCCCACACATACAGCTGGGAACCAGAAGTGGACCTGTaGCTCCCAGAGGACCTGTTCCTTAGGTCACAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: AHTYSWEPEVDL*LPEDLFLRSQS Trigger: GGACTGTGACCTAAGGAACAGGTCCTCTGGGAGCCACAGGTCCACTTCTGGTTCCCAGCTGTATGTGTGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS CCA 72 bp | GAGGTAGATGTAGGAAGGGAGAGCACATTCCCGTACTaGTTCTGGGTCCCGTTTCCCGAGGGAGGCGTCACT | + |
|
Preference number: 6 (lower is better) Translates to: EVDVGRESTFPY*FWVPFPEGGVT Trigger: AGTGACGCCTCCCTCGGGAAACGGGACCCAGAACCAGTACGGGAATGTGCTCTCCCTTCCTACATCTACCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS TCA 72 bp | ACCTCGATACCAAGCCAGCTTCTCAGAAGAGACAGGTaGGGAGTCCGGGAGGCATGGCAGCACAACATTGCC | + |
|
Preference number: 6 (lower is better) Translates to: TSIPSQLLRRDR*GVREAWQHNIA Trigger: GGCAATGTTGTGCTGCCATGCCTCCCGGACTCCTCACCTGTCTCTTCTGAGAAGCTGGCTTGGTATCGAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS TCA 72 bp | CAGAGGACCTGTTCCTTAGGTCACAGTCCAGGTCCCTaGCGTCTGAAGCATTCCACCGGAACATCTCCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: QRTCSLGHSPGP*RLKHSTGTSPH Trigger: GTGGGGAGATGTTCCGGTGGAATGCTTCAGACGTCAGGGACCTGGACTGTGACCTAAGGAACAGGTCCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS GCA 72 bp | CAGGTGAGGAGTCCGGGAGGCATGGCAGCACAACATTaGCTCCCTCTTCTACCTCCACCAGTAAGGACTTCT | + |
|
Preference number: 6 (lower is better) Translates to: QVRSPGGMAAQH*LPLLPPPVRTS Trigger: AGAAGTCCTTACTGGTGGAGGTAGAAGAGGGAGGCAATGTTGTGCTGCCATGCCTCCCGGACTCCTCACCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS GCA 72 bp | ACGCAGACCCATGGGGGCTCAGGAAGTCCATCATCCTaGCAACTGGTTGGGCCAGCTCCTCATCTGCATTTT | + |
|
Preference number: 6 (lower is better) Translates to: TQTHGGSGSPSS*QLVGPAPHLHF Trigger: AAAATGCAGATGAGGAGCTGGCCCAACCAGTTGGCAGGATGATGGACTTCCTGAGCCCCCATGGGTCTGCGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
||
| CDS CCA 72 bp | GATGTAGGAAGGGAGAGCACATTCCCGTACTGGTTCTaGGTCCCGTTTCCCGAGGGAGGCGTCACTTTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: DVGRESTFPYWF*VPFPEGGVTLK Trigger: CTTCAAAGTGACGCCTCCCTCGGGAAACGGGACCCAGAACCAGTACGGGAATGTGCTCTCCCTTCCTACATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| CDS CCA 72 bp | CACTCCCATCCTGGGAAACCTGGTCCTGCCCAAGGTTaGAGTCGTTCTCATAGAATTCAGAGCCCTCCTCGC | + |
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Preference number: 6 (lower is better) Translates to: HSHPGKPGPAQG*SRSHRIQSPPR Trigger: GCGAGGAGGGCTCTGAATTCTATGAGAACGACTCCAACCTTGGGCAGGACCAGGTTTCCCAGGATGGGAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| CDS CAA 72 bp | ACAGGTGAGGAGTCCGGGAGGCATGGCAGCACAACATaGCCTCCCTCTTCTACCTCCACCAGTAAGGACTTC | + |
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Preference number: 6 (lower is better) Translates to: TGEESGRHGSTT*PPSSTSTSKDF Trigger: GAAGTCCTTACTGGTGGAGGTAGAAGAGGGAGGCAATGTTGTGCTGCCATGCCTCCCGGACTCCTCACCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| CDS GCA 72 bp | AGAAGAGACCCCCAAACCCACATCTCTCTGACCGGGTaGTCTCCCCCAAGGCTTAGGCTCAGTAGTGAAACA | + |
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Preference number: 6 (lower is better) Translates to: RRDPQTHISLTG*SPPRLRLSSET Trigger: TGTTTCACTACTGAGCCTAAGCCTTGGGGGAGAGCACCCGGTCAGAGAGATGTGGGTTTGGGGGTCTCTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| CDS CCA 72 bp | CAGCATTGGAGAAGGAGTCTTCTTCCTCTGGACCCATaGGCTCATCCTCGGGGTTCTCATAGCCACTCCCAT | + |
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Preference number: 6 (lower is better) Translates to: QHWRRSLLPLDP*AHPRGSHSHSH Trigger: ATGGGAGTGGCTATGAGAACCCCGAGGATGAGCCCATGGGTCCAGAGGAAGAAGACTCCTTCTCCAATGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| CDS CAA 90 bp | CGCAGACCCATGGGGGCTCAGGAAGTCCATCATCCTGCCAACTGGTaGGGCCAGCTCCTCATCTGCATTTTCATAAGACTCAGCATTGGA | + |
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Preference number: 6 (lower is better) Translates to: RRPMGAQEVHHPANW*GQLLICIFIRLSIG Trigger: TCCAATGCTGAGTCTTATGAAAATGCAGATGAGGAGCTGGCCCAACCAGTTGGCAGGATGATGGACTTCCTGAGCCCCCATGGGTCTGCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| CDS TCA 72 bp | TTCTCAACAGCCAGAGCCACACTGCTGACCTTGCAATaGCCTTCACGTGCCTCTCGATGGTCAGGTTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: FSTARATLLTLQ*PSRASRWSGFL Trigger: GAGGAAACCTGACCATCGAGAGGCACGTGAAGGTCATTGCAAGGTCAGCAGTGTGGCTCTGGCTGTTGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206325.2 |
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| CDS TCA 72 bp | TATCCATCCACCAGTTCTCAACAGCCAGAGCCACACTaGCCTTGCAATGACCTTCACGTGCCTCTCGATGGT | + |
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Preference number: 6 (lower is better) Translates to: YPSTSSQQPEPH*PCNDLHVPLDG Trigger: ACCATCGAGAGGCACGTGAAGGTCATTGCAAGGTCAGTGTGGCTCTGGCTGTTGAGAACTGGTGGATGGATA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032968.7 |
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| CDS CCA 72 bp | GGGGCACATACAGGCTTTGTTCCCCAGACCTTAGGATaGTCTTTAGCCCACACATACAGCTGGGAACCAGAA | + |
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Preference number: 6 (lower is better) Translates to: GAHTGFVPQTLG*SLAHTYSWEPE Trigger: TTCTGGTTCCCAGCTGTATGTGTGGGCTAAAGACCATCCTAAGGTCTGGGGAACAAAGCCTGTATGTGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| CDS CCA 72 bp | CTCGGAGACAATAATAGGTGCCTTCATCTAAAGCTGTaGCTTGGGGCAGAAGCAGAAGAGACCCCCAAACCC | + |
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Preference number: 6 (lower is better) Translates to: LGDNNRCLHLKL*LGAEAEETPKP Trigger: GGGTTTGGGGGTCTCTTCTGCTTCTGCCCCAAGCCACAGCTTTAGATGAAGGCACCTATTATTGTCTCCGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| CDS CCA 72 bp | ATAAGACTCAGCATTGGAGAAGGAGTCTTCTTCCTCTaGACCCATGGGCTCATCCTCGGGGTTCTCATAGCC | + |
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Preference number: 6 (lower is better) Translates to: IRLSIGEGVFFL*THGLILGVLIA Trigger: GGCTATGAGAACCCCGAGGATGAGCCCATGGGTCCAGAGGAAGAAGACTCCTTCTCCAATGCTGAGTCTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| CDS CAA 72 bp | AGTCTGCATCTTCTTCATGACTGGGACCGGACTGAATaGAGTGGAGCTGAGGAGCTGCATAGAGGATCCCTC | + |
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Preference number: 6 (lower is better) Translates to: SLHLLHDWDRTE*SGAEELHRGSL Trigger: GAGGGATCCTCTATGCAGCTCCTCAGCTCCACTCAATTCAGTCCGGTCCCAGTCATGAAGAAGATGCAGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| CDS GCA 72 bp | TTTCATGGCTCTGAGCTCCAGTATCCTGGACTTGAATaGGTGGATTTCCATAGGACCCAGGGACACTCCCTA | + |
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Preference number: 6 (lower is better) Translates to: FHGSELQYPGLE*VDFHRTQGHSL Trigger: TAGGGAGTGTCCCTGGGTCCTATGGAAATCCACGCATTCAAGTCCAGGATACTGGAGCTCAGAGCCATGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| CDS GCA 72 bp | TCTCGATGGTCAGGTTTCCTCGGAGACAATAATAGGTaGCTTCATCTAAAGCTGTGGCTTGGGGCAGAAGCA | + |
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Preference number: 6 (lower is better) Translates to: SRWSGFLGDNNR*LHLKLWLGAEA Trigger: TGCTTCTGCCCCAAGCCACAGCTTTAGATGAAGGCACCTATTATTGTCTCCGAGGAAACCTGACCATCGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| CDS CAA 90 bp | TTTCATAAGAGTCTGCATCTTCTTCATGACTGGGACCGGACTGAATaGAGTGGAGCTGAGGAGCTGCATAGAGGATCCCTCTCATATCTT | + |
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Preference number: 6 (lower is better) Translates to: FHKSLHLLHDWDRTE*SGAEELHRGSLSYL Trigger: AAGATATGAGAGGGATCCTCTATGCAGCTCCTCAGCTCCACTCAATTCAGTCCGGTCCCAGTCATGAAGAAGATGCAGACTCTTATGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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| CDS CAA 72 bp | CATTCGCTTCCTTTTCCTTCTCAGGATAAAGGCTCTTaGACAATAGAGAAAAGCCACCAGAGAAACCATACA | + |
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Preference number: 6 (lower is better) Translates to: HSLPFPSQDKGS*TIEKSHQRNHT Trigger: TGTATGGTTTCTCTGGTGGCTTTTCTCTATTGTCAAAGAGCCTTTATCCTGAGAAGGAAAAGGAAGCGAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032968.7 ENSMUST00000206325.2 |
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