Pregenerated sensors for CD180 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021624Ensembl transcript IDs: ENSMUST00000022124.10, ENSMUST00000167144.2, ENSMUST00000170878.2, ENSMUST00000171267.2, ENSMUST00000172138.2
Found 148 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CATTTAGCAGGTCGGCTGTCTTGTCACTGTGTGACAGGGTGGGACTaGAGACTTAGCTCGCGTGAGGATTATTTTAAGAAGGTTCTGAGC | + |
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Preference number: 1 (lower is better) Translates to: HLAGRLSCHCVTGWD*RLSSREDYFKKVLS Trigger: GCTCAGAACCTTCTTAAAATAATCCTCACGCGAGCTAAGTCTTCAGTCCCACCCTGTCACACAGTGACAAGACAGCCGACCTGCTAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170878.2 ENSMUST00000172138.2 |
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| 3UTR GCA 90 bp | TACCCACAAGTGAGTAGTGATATTGGCGGTAGCATCTCACAATGGTaGTTACAAACAAGAAATATCATCATAGGTGTGTGTGTTCTCCCG | + |
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Preference number: 1 (lower is better) Translates to: YPQVSSDIGGSISQW*LQTRNIIIGVCVLP Trigger: CGGGAGAACACACACACCTATGATGATATTTCTTGTTTGTAAGCACCATTGTGAGATGCTACCGCCAATATCACTACTCACTTGTGGGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171267.2 |
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| 3UTR CCA 90 bp | TCTCTCTTCTTTCCACATATGCAAGTTGCACACCCTCACTTGCTTTaGATATTTCTGCCCATTTGTTCTGAAACATTGCTTCAGCATTCA | + |
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Preference number: 1 (lower is better) Translates to: SLFFPHMQVAHPHLL*IFLPICSETLLQHS Trigger: TGAATGCTGAAGCAATGTTTCAGAACAAATGGGCAGAAATATCCAAAGCAAGTGAGGGTGTGCAACTTGCATATGTGGAAAGAAGAGAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171267.2 |
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| 3UTR CCA 90 bp | ATCTACCCACAAGTGAGTAGTGATATTGGCGGTAGCATCTCACAATaGTGCTTACAAACAAGAAATATCATCATAGGTGTGTGTGTTCTC | + |
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Preference number: 1 (lower is better) Translates to: IYPQVSSDIGGSISQ*CLQTRNIIIGVCVL Trigger: GAGAACACACACACCTATGATGATATTTCTTGTTTGTAAGCACCATTGTGAGATGCTACCGCCAATATCACTACTCACTTGTGGGTAGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171267.2 |
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| 3UTR TCA 90 bp | CCCTCCTCATGCCACAGCCCTTTAATACAGTTCCTCATGTTGTGGTaGCCCTCCAGCCATAAAATTATTTTGTTTATATTTCATAACTGT | + |
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Preference number: 1 (lower is better) Translates to: PSSCHSPLIQFLMLW*PSSHKIILFIFHNC Trigger: ACAGTTATGAAATATAAACAAAATAATTTTATGGCTGGAGGGTCACCACAACATGAGGAACTGTATTAAAGGGCTGTGGCATGAGGAGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171267.2 |
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| 3UTR CCA 90 bp | TTGCTTCAGCATTCACATAAAACTTTTCAGCTATATTTCACTAGTTaGAATCATGATTCGCCTCTAGAGCAGATAATGGAACTCTTTATC | + |
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Preference number: 1 (lower is better) Translates to: LLQHSHKTFQLYFTS*NHDSPLEQIMELFI Trigger: GATAAAGAGTTCCATTATCTGCTCTAGAGGCGAATCATGATTCCAACTAGTGAAATATAGCTGAAAAGTTTTATGTGAATGCTGAAGCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171267.2 |
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| 3UTR-3UTR TCA 90 bp | AGTTGGCCCCAGCATAGCCAAGTTGGGTGGAGGCTAGGCTGGGGGTGGGAGCCATTCAGAAAAGCTCAGTaGACCCCCAGCCCAGCCCTA | + |
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Preference number: 2 (lower is better) Translates to: SWPQHSQVGWRLGWGWEPFRKAQ*TPSPAL Trigger: TAGGGCTGGGCTGGGGGTTCACTGAGCTTTTCTGAA...TGGCTCCCACCCCCAGCCTAGCCTCCACCCAACTTGGCTATGCTGGGGCCAACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
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| 3UTR-3UTR GCA 90 bp | TCTCCACTTAGGAGGAGATCTCTCTTCAAGAAGCTGGCCAAGCAGCCTTCTCCTAGCAGCCTTCTCCTTTaGTCCACACCAGCCGAAGTT | + |
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Preference number: 2 (lower is better) Translates to: SPLRRRSLFKKLAKQPSPSSLLL*STPAEV Trigger: AACTTCGGCTGGTGTGGAGCAAAGGAGAAGGCTGCT...AGGAGAAGGCTGCTTGGCCAGCTTCTTGAAGAGAGATCTCCTCCTAAGTGGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170878.2 ENSMUST00000172138.2 |
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| 3UTR-3UTR GCA 90 bp | GAGGATTATTTTAAGAAGGTTCTGAGCCCTGTGCTTCTCTGTCTCCACTTAGGAAGCAGCCTTCTCCTTTaGTCCACACCAGCCGAAGTT | + |
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Preference number: 2 (lower is better) Translates to: EDYFKKVLSPVLLCLHLGSSLLL*STPAEV Trigger: AACTTCGGCTGGTGTGGAGCAAAGGAGAAGGCTGCT...TCCTAAGTGGAGACAGAGAAGCACAGGGCTCAGAACCTTCTTAAAATAATCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170878.2 ENSMUST00000172138.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGAAAGAGAGCAGTGGGTCAGAGTTGGCCCCAGCATAGCCAAGTTGGGTGGAGACAGTTTCTTCACTTaGGACAATTTTGCTAAACAC | + |
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Preference number: 2 (lower is better) Translates to: REREQWVRVGPSIAKLGGDSFFT*DNFAKH Trigger: GTGTTTAGCAAAATTGTCCCAAGTGAAGAAACTGTC...TCCACCCAACTTGGCTATGCTGGGGCCAACTCTGACCCACTGCTCTCTTTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
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| 3UTR-3UTR CCA 90 bp | CTTAGCTCGCGTGAGGATTATTTTAAGAAGGTTCTGAGCCCTGTGCTTCTCTGTCTCTCTTCAAGAAGCTaGCCAAGCAGCCTTCTCCTT | + |
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Preference number: 2 (lower is better) Translates to: LSSREDYFKKVLSPVLLCLSSRS*PSSLLL Trigger: AAGGAGAAGGCTGCTTGGCCAGCTTCTTGAAGAGAG...ACAGAGAAGCACAGGGCTCAGAACCTTCTTAAAATAATCCTCACGCGAGCTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170878.2 ENSMUST00000172138.2 |
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| 3UTR CAA 90 bp | TGTCTCGGAAGCCTCAGGCTTCTCTCTTCTTTCCACATATGCAAGTaGCACACCCTCACTTGCTTTGGATATTTCTGCCCATTTGTTCTG | + |
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Preference number: 2 (lower is better) Translates to: CLGSLRLLSSFHICK*HTLTCFGYFCPFVL Trigger: CAGAACAAATGGGCAGAAATATCCAAAGCAAGTGAGGGTGTGCAACTTGCATATGTGGAAAGAAGAGAGAAGCCTGAGGCTTCCGAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171267.2 |
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| 3UTR-3UTR TCA 90 bp | ATCAATTACACACTTGTGCACGTGAACACACACCCCTTTGTTTGCACACATGCGTTCCTCATGTTGTGGTaGCCCTCCAGCCATAAAATT | + |
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Preference number: 2 (lower is better) Translates to: INYTLVHVNTHPFVCTHAFLMLW*PSSHKI Trigger: AATTTTATGGCTGGAGGGTCACCACAACATGAGGAA...CGCATGTGTGCAAACAAAGGGGTGTGTGTTCACGTGCACAAGTGTGTAATTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171267.2 |
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| 3UTR-3UTR TCA 90 bp | ACTATGTGTCAGATGATAGATGGGGAAATGCTTCTTGAACTGGAAAACAGTAAACAAGGTCAGCCTGGCTaGCAGAGTGAATTCCAAGAC | + |
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Preference number: 2 (lower is better) Translates to: TMCQMIDGEMLLELENSKQGQPG*QSEFQD Trigger: GTCTTGGAATTCACTCTGTCAGCCAGGCTGACCTTG...TTTACTGTTTTCCAGTTCAAGAAGCATTTCCCCATCTATCATCTGACACATAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171267.2 |
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| 3UTR-3UTR GCA 90 bp | ACTATGTGTCAGATGATAGATGGGGAAATGCTTCTTGAACTGGAAAACAGTAAATTGCACACCCTCACTTaGTTTGGATATTTCTGCCCA | + |
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Preference number: 2 (lower is better) Translates to: TMCQMIDGEMLLELENSKLHTLT*FGYFCP Trigger: TGGGCAGAAATATCCAAAGCAAGTGAGGGTGTGCAA...TTTACTGTTTTCCAGTTCAAGAAGCATTTCCCCATCTATCATCTGACACATAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171267.2 |
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| 3UTR-3UTR CCA 90 bp | TCCACATATGCAAGTTGCACACCCTCACTTGCTTTGGATATTTCTGCCCATTTGCTATATTTCACTAGTTaGAATCATGATTCGCCTCTA | + |
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Preference number: 2 (lower is better) Translates to: STYASCTPSLALDISAHLLYFTS*NHDSPL Trigger: TAGAGGCGAATCATGATTCCAACTAGTGAAATATAG...CAAATGGGCAGAAATATCCAAAGCAAGTGAGGGTGTGCAACTTGCATATGTGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171267.2 |
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| 3UTR-3UTR CAA 90 bp | TGCTTAAACCGGTCCCTGTCATCTGGAGAGAGCCTCCCGGGTTCCCCAACTCACTCCCCAACTCACAGCTaGTCCCCGAGGTCTCCAACA | + |
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Preference number: 3 (lower is better) Translates to: CLNRSLSSGESLPGSPTHSPTHS*SPRSPT Trigger: TGTTGGAGACCTCGGGGACAAGCTGTGAGTTGGGGA...GTGAGTTGGGGAACCCGGGAGGCTCTCTCCAGATGACAGGGACCGGTTTAAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000170878.2 ENSMUST00000172138.2 |
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| 3UTR CCA 72 bp | CAGAAGTATAAGAGAAAGAGAGCAGTGGGTCAGAGTTaGCCCCAGCATAGCCAAGTTGGGTGGAGGCTAGGC | + |
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Preference number: 3 (lower is better) Translates to: QKYKRKRAVGQS*PQHSQVGWRLG Trigger: GCCTAGCCTCCACCCAACTTGGCTATGCTGGGGCCAACTCTGACCCACTGCTCTCTTTCTCTTATACTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
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| 3UTR-3UTR CAA 90 bp | AAGGTTCTGAGCCCTGTGCTTCTCTGTCTCCACTTAGGAGGAGATCTCTCTTCATCCCCAACTCACAGCTaGTCCCCGAGGTCTCCAACA | + |
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Preference number: 3 (lower is better) Translates to: KVLSPVLLCLHLGGDLSSSPTHS*SPRSPT Trigger: TGTTGGAGACCTCGGGGACAAGCTGTGAGTTGGGGA...TGAAGAGAGATCTCCTCCTAAGTGGAGACAGAGAAGCACAGGGCTCAGAACCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170878.2 ENSMUST00000172138.2 |
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| 3UTR CCA 72 bp | ACTGGAGGGACTGCCTCTGTGTCTCACAGCCATGTCTaGTCCTCCAACCACAGTACCATGGAAGACTCATAT | + |
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Preference number: 3 (lower is better) Translates to: TGGTASVSHSHV*SSNHSTMEDSY Trigger: ATATGAGTCTTCCATGGTACTGTGGTTGGAGGACCAGACATGGCTGTGAGACACAGAGGCAGTCCCTCCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
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| 3UTR TCA 72 bp | GGTCGGCTGTCTTGTCACTGTGTGACAGGGTGGGACTaGAGACTTAGCTCGCGTGAGGATTATTTTAAGAAG | + |
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Preference number: 3 (lower is better) Translates to: GRLSCHCVTGWD*RLSSREDYFKK Trigger: CTTCTTAAAATAATCCTCACGCGAGCTAAGTCTTCAGTCCCACCCTGTCACACAGTGACAAGACAGCCGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170878.2 ENSMUST00000172138.2 |
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| 3UTR GCA 72 bp | CTAAGCCATGAGAACGTTGTCAGCACAGAAGTGGCATaGTACCATTTAGCAGGTCGGCTGTCTTGTCACTGT | + |
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Preference number: 3 (lower is better) Translates to: LSHENVVSTEVA*YHLAGRLSCHC Trigger: ACAGTGACAAGACAGCCGACCTGCTAAATGGTAGCATGCCACTTCTGTGCTGACAACGTTCTCATGGCTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170878.2 |
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| 3UTR CCA 72 bp | ACCCCCAGCCCAGCCCTAGGAACTAATAGAAAAGTCTaGTCACTCAAGGATGACAGTTTCTTCACTTGGGAC | + |
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Preference number: 3 (lower is better) Translates to: TPSPALGTNRKV*SLKDDSFFTWD Trigger: GTCCCAAGTGAAGAAACTGTCATCCTTGAGTGACCAGACTTTTCTATTAGTTCCTAGGGCTGGGCTGGGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
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| 3UTR-3UTR CAA 90 bp | GGGACTGCCTCTGTGTCTCACAGCCATGTCTGGTCCTCCAACCACAGTACCATGTCACTTGGGACAATTTaGCTAAACACATTTATCTGC | + |
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Preference number: 3 (lower is better) Translates to: GTASVSHSHVWSSNHSTMSLGTI*LNTFIC Trigger: GCAGATAAATGTGTTTAGCAAAATTGTCCCAAGTGA...CATGGTACTGTGGTTGGAGGACCAGACATGGCTGTGAGACACAGAGGCAGTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
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| 3UTR TCA 72 bp | GACATTCTTCATGTGTACTATCAGCCTCCTAAGCCATaGGAACGTTGTCAGCACAGAAGTGGCATGCTACCA | + |
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Preference number: 3 (lower is better) Translates to: DILHVYYQPPKP*ERCQHRSGMLP Trigger: TGGTAGCATGCCACTTCTGTGCTGACAACGTTCTCATGGCTTAGGAGGCTGATAGTACACATGAAGAATGTC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170878.2 |
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| 3UTR GCA 72 bp | CTCGGAAGCCTCAGGCTTCTCTCTTCTTTCCACATATaGAAGTTGCACACCCTCACTTGCTTTGGATATTTC | + |
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Preference number: 3 (lower is better) Translates to: LGSLRLLSSFHI*KLHTLTCFGYF Trigger: GAAATATCCAAAGCAAGTGAGGGTGTGCAACTTGCATATGTGGAAAGAAGAGAGAAGCCTGAGGCTTCCGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171267.2 |
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| 3UTR-3UTR CAA 90 bp | CTCAGGCTTCTCTCTTCTTTCCACATATGCAAGTTGCACACCCTCACTTGCTTTTCTCTTAAAATACCATaGCTCAGTGACAGCCAACTC | + |
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Preference number: 3 (lower is better) Translates to: LRLLSSFHICKLHTLTCFSLKIP*LSDSQL Trigger: GAGTTGGCTGTCACTGAGCAATGGTATTTTAAGAGA...AAAGCAAGTGAGGGTGTGCAACTTGCATATGTGGAAAGAAGAGAGAAGCCTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171267.2 |
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| 3UTR CCA 72 bp | CTCACAGCCATGTCTGGTCCTCCAACCACAGTACCATaGAAGACTCATATGAGTAAGACATATGTTCAGAAA | + |
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Preference number: 3 (lower is better) Translates to: LTAMSGPPTTVP*KTHMSKTYVQK Trigger: TTTCTGAACATATGTCTTACTCATATGAGTCTTCCATGGTACTGTGGTTGGAGGACCAGACATGGCTGTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
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| 3UTR GCA 72 bp | TGCAAGTTGCACACCCTCACTTGCTTTGGATATTTCTaGCCATTTGTTCTGAAACATTGCTTCAGCATTCAC | + |
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Preference number: 3 (lower is better) Translates to: CKLHTLTCFGYF*PFVLKHCFSIH Trigger: GTGAATGCTGAAGCAATGTTTCAGAACAAATGGGCAGAAATATCCAAAGCAAGTGAGGGTGTGCAACTTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171267.2 |
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| 3UTR CCA 72 bp | CAGGACCTAGCACATGCTAAGCATACATTCTACCAATaGGCTATAGTCTTGCTCTTTTCTCATCAGGTATAT | + |
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Preference number: 3 (lower is better) Translates to: QDLAHAKHTFYQ*AIVLLFSHQVY Trigger: ATATACCTGATGAGAAAAGAGCAAGACTATAGCCCATTGGTAGAATGTATGCTTAGCATGTGCTAGGTCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171267.2 |
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| 3UTR GCA 72 bp | GTGAGTAGTGATATTGGCGGTAGCATCTCACAATGGTaGTTACAAACAAGAAATATCATCATAGGTGTGTGT | + |
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Preference number: 3 (lower is better) Translates to: VSSDIGGSISQW*LQTRNIIIGVC Trigger: ACACACACCTATGATGATATTTCTTGTTTGTAAGCACCATTGTGAGATGCTACCGCCAATATCACTACTCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171267.2 |
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| 3UTR TCA 72 bp | TGCCACAGCCCTTTAATACAGTTCCTCATGTTGTGGTaGCCCTCCAGCCATAAAATTATTTTGTTTATATTT | + |
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Preference number: 3 (lower is better) Translates to: CHSPLIQFLMLW*PSSHKIILFIF Trigger: AAATATAAACAAAATAATTTTATGGCTGGAGGGTCACCACAACATGAGGAACTGTATTAAAGGGCTGTGGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171267.2 |
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| 3UTR GCA 72 bp | ACTAGAGAGATCTATGAATTTCTCTTAAAATACCATTaGTCAGTGACAGCCAACTCTATTAACAGGCAGTGT | + |
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Preference number: 3 (lower is better) Translates to: TREIYEFLLKYH*SVTANSINRQC Trigger: ACACTGCCTGTTAATAGAGTTGGCTGTCACTGAGCAATGGTATTTTAAGAGAAATTCATAGATCTCTCTAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171267.2 |
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| 3UTR CCA 72 bp | CATTCACATAAAACTTTTCAGCTATATTTCACTAGTTaGAATCATGATTCGCCTCTAGAGCAGATAATGGAA | + |
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Preference number: 3 (lower is better) Translates to: HSHKTFQLYFTS*NHDSPLEQIME Trigger: TTCCATTATCTGCTCTAGAGGCGAATCATGATTCCAACTAGTGAAATATAGCTGAAAAGTTTTATGTGAATG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171267.2 |
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| CDS-3UTR CCA 90 bp | AGTTGGCCCCAGCATAGCCAAGTTGGGTGGAGGCTAGGCTGGGGGTGGGAGCCAAGGCGTGCTGGTCAATaGAGGAGAGATCACAAAAGG | + |
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Preference number: 4 (lower is better) Translates to: SWPQHSQVGWRLGWGWEPRRAGQ*RRDHKR Trigger: CCTTTTGTGATCTCTCCTCCATTGACCAGCACGCCT...TGGCTCCCACCCCCAGCCTAGCCTCCACCCAACTTGGCTATGCTGGGGCCAACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
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| CDS-3UTR CCA 90 bp | GGTCAGAGTTGGCCCCAGCATAGCCAAGTTGGGTGGAGGCTAGGCTGGGGGTGGGTTTCAATGTCATCATaGCTGAGGTCAAGTTCGCGG | + |
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Preference number: 4 (lower is better) Translates to: GQSWPQHSQVGWRLGWGWVSMSS*LRSSSR Trigger: CCGCGAACTTGACCTCAGCCATGATGACATTGAAAC...CCACCCCCAGCCTAGCCTCCACCCAACTTGGCTATGCTGGGGCCAACTCTGACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
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| 3UTR CAA 72 bp | TCTGGAGAGAGCCTCCCGGGTTCCCCAACTCACAGCTaGTCCCCGAGGTCTCCAACACCCAGTTATCGTTCT | + |
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Preference number: 4 (lower is better) Translates to: SGESLPGSPTHS*SPRSPTPSYRS Trigger: AGAACGATAACTGGGTGTTGGAGACCTCGGGGACAAGCTGTGAGTTGGGGAACCCGGGAGGCTCTCTCCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172138.2 |
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| CDS-3UTR TCA 90 bp | GGGACTGCCTCTGTGTCTCACAGCCATGTCTGGTCCTCCAACCACAGTACCATGACTTTGGAAGACAGCTaGGTCGAAAGCCCCCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: GTASVSHSHVWSSNHSTMTLEDS*VESPQL Trigger: GAGCTGGGGGCTTTCGACTCAGCTGTCTTCCAAAGT...CATGGTACTGTGGTTGGAGGACCAGACATGGCTGTGAGACACAGAGGCAGTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
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| CDS-3UTR TCA 90 bp | AGAGAAAGAGAGCAGTGGGTCAGAGTTGGCCCCAGCATAGCCAAGTTGGGTGGAAGAGCTGCTCACTGCTaGTGTCAAGGAGGCTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: REREQWVRVGPSIAKLGGRAAHC*CQGGCG Trigger: CCCACAGCCTCCTTGACATCAGCAGTGAGCAGCTCT...TCCACCCAACTTGGCTATGCTGGGGCCAACTCTGACCCACTGCTCTCTTTCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
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| CDS-3UTR TCA 90 bp | CTCAGATGGGTAGAGCTGACTGTGGGTCGCTTCTCACTGGAGGGACTGCCTCTGTCATCTTCAGACTGGTaGAGGCGTGCTGGTCAATGG | + |
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Preference number: 4 (lower is better) Translates to: LRWVELTVGRFSLEGLPLSSSDW*RRAGQW Trigger: CCATTGACCAGCACGCCTTCACCAGTCTGAAGATGA...CAGAGGCAGTCCCTCCAGTGAGAAGCGACCCACAGTCAGCTCTACCCATCTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
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| CDS-3UTR CCA 90 bp | GGTCAGAGTTGGCCCCAGCATAGCCAAGTTGGGTGGAGGCTAGGCTGGGGGTGGAGGCCACTGAAGCAATaGAATGTGTTGGAGGAAATG | + |
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Preference number: 4 (lower is better) Translates to: GQSWPQHSQVGWRLGWGWRPLKQ*NVLEEM Trigger: CATTTCCTCCAACACATTCCATTGCTTCAGTGGCCT...CCACCCCCAGCCTAGCCTCCACCCAACTTGGCTATGCTGGGGCCAACTCTGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
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| CDS-3UTR CCA 90 bp | CTCAGATGGGTAGAGCTGACTGTGGGTCGCTTCTCACTGGAGGGACTGCCTCTGGTTAGGTCCAGTTCCTaGAGGCCACTGAAGCAATGG | + |
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Preference number: 4 (lower is better) Translates to: LRWVELTVGRFSLEGLPLVRSSS*RPLKQW Trigger: CCATTGCTTCAGTGGCCTCCAGGAACTGGACCTAAC...CAGAGGCAGTCCCTCCAGTGAGAAGCGACCCACAGTCAGCTCTACCCATCTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
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| CDS-3UTR TCA 90 bp | CTCAGATGGGTAGAGCTGACTGTGGGTCGCTTCTCACTGGAGGGACTGCCTCTGTCTAGGAGTTCTAGCTaGGGGCATTCTTTGAATGCC | + |
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Preference number: 4 (lower is better) Translates to: LRWVELTVGRFSLEGLPLSRSSS*GHSLNA Trigger: GGCATTCAAAGAATGCCCTCAGCTAGAACTCCTAGA...CAGAGGCAGTCCCTCCAGTGAGAAGCGACCCACAGTCAGCTCTACCCATCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
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| CDS-3UTR GCA 90 bp | GGTCAGAGTTGGCCCCAGCATAGCCAAGTTGGGTGGAGGCTAGGCTGGGGGTGGAAATGTTTGAGCAAGTaGAGTCAAGGGGATTTTGTC | + |
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Preference number: 4 (lower is better) Translates to: GQSWPQHSQVGWRLGWGWKCLSK*SQGDFV Trigger: GACAAAATCCCCTTGACTGCACTTGCTCAAACATTT...CCACCCCCAGCCTAGCCTCCACCCAACTTGGCTATGCTGGGGCCAACTCTGACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
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| CDS-3UTR CCA 90 bp | GAGATCTCTCTTCAAGAAGCTGGCCAAGCAGCCTTCTCCTTTGCTCCACACCAGGATCTGAGGATGTGGTaGCTCGGCAACTGGCCAAGA | + |
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Preference number: 4 (lower is better) Translates to: EISLQEAGQAAFSFAPHQDLRMW*LGNWPR Trigger: TCTTGGCCAGTTGCCGAGCCACCACATCCTCAGATC...CTGGTGTGGAGCAAAGGAGAAGGCTGCTTGGCCAGCTTCTTGAAGAGAGATCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170878.2 ENSMUST00000172138.2 |
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| CDS-3UTR TCA 90 bp | GAGATCTCTCTTCAAGAAGCTGGCCAAGCAGCCTTCTCCTTTGCTCCACACCAGAATGCACTTCTGATCTaGGGATGTGGTGGCTCGGCA | + |
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Preference number: 4 (lower is better) Translates to: EISLQEAGQAAFSFAPHQNALLI*GCGGSA Trigger: TGCCGAGCCACCACATCCTCAGATCAGAAGTGCATT...CTGGTGTGGAGCAAAGGAGAAGGCTGCTTGGCCAGCTTCTTGAAGAGAGATCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170878.2 ENSMUST00000172138.2 |
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| CDS-3UTR TCA 90 bp | GGTCAGAGTTGGCCCCAGCATAGCCAAGTTGGGTGGAGGCTAGGCTGGGGGTGGTGCCAGGAATTTCATTaGGACCTAAATTTTCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: GQSWPQHSQVGWRLGWGWCQEFH*DLNFHS Trigger: ACTGTGAAAATTTAGGTCTCAATGAAATTCCTGGCA...CCACCCCCAGCCTAGCCTCCACCCAACTTGGCTATGCTGGGGCCAACTCTGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
||
| CDS-3UTR GCA 90 bp | GGGACTGCCTCTGTGTCTCACAGCCATGTCTGGTCCTCCAACCACAGTACCATGAAATTAATGGTCCTCTaGTGGGACAAGATGGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GTASVSHSHVWSSNHSTMKLMVL*WDKMGR Trigger: CCTCCCCATCTTGTCCCAGCAGAGGACCATTAATTT...CATGGTACTGTGGTTGGAGGACCAGACATGGCTGTGAGACACAGAGGCAGTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
||
| CDS-3UTR CCA 90 bp | TTAGGAGGAGATCTCTCTTCAAGAAGCTGGCCAAGCAGCCTTCTCCTTTGCTCCGATCTGAGGATGTGGTaGCTCGGCAACTGGCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGGDLSSRSWPSSLLLCSDLRMW*LGNWPR Trigger: TCTTGGCCAGTTGCCGAGCCACCACATCCTCAGATC...GGAGCAAAGGAGAAGGCTGCTTGGCCAGCTTCTTGAAGAGAGATCTCCTCCTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170878.2 ENSMUST00000172138.2 |
||
| CDS-3UTR TCA 90 bp | CTCCACTTAGGAGGAGATCTCTCTTCAAGAAGCTGGCCAAGCAGCCTTCTCCTTAATGCACTTCTGATCTaGGGATGTGGTGGCTCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LHLGGDLSSRSWPSSLLLNALLI*GCGGSA Trigger: TGCCGAGCCACCACATCCTCAGATCAGAAGTGCATT...AAGGAGAAGGCTGCTTGGCCAGCTTCTTGAAGAGAGATCTCCTCCTAAGTGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170878.2 ENSMUST00000172138.2 |
||
| CDS-3UTR TCA 90 bp | CTGCCTCTGTGTCTCACAGCCATGTCTGGTCCTCCAACCACAGTACCATGGAAGTTCTCAATGCACTTCTaGTCTGAGGATGTGGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LPLCLTAMSGPPTTVPWKFSMHF*SEDVVA Trigger: AGCCACCACATCCTCAGATCAGAAGTGCATTGAGAA...CTTCCATGGTACTGTGGTTGGAGGACCAGACATGGCTGTGAGACACAGAGGCAG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
||
| CDS-3UTR GCA 90 bp | CTGCCTCTGTGTCTCACAGCCATGTCTGGTCCTCCAACCACAGTACCATGGAAGGAACAGATGCTTCAATaGCTTAGGCCCACTAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LPLCLTAMSGPPTTVPWKEQMLQ*LRPTKC Trigger: GCACTTAGTGGGCCTAAGGCATTGAAGCATCTGTTC...CTTCCATGGTACTGTGGTTGGAGGACCAGACATGGCTGTGAGACACAGAGGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
||
| CDS-3UTR CCA 90 bp | AGAGAAAGAGAGCAGTGGGTCAGAGTTGGCCCCAGCATAGCCAAGTTGGGTGGACTTCAGCTTCTCTGTTaGGAAACCTTTGGGGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: REREQWVRVGPSIAKLGGLQLLC*ETFGEL Trigger: AAGCTCCCCAAAGGTTTCCCAACAGAGAAGCTGAAG...TCCACCCAACTTGGCTATGCTGGGGCCAACTCTGACCCACTGCTCTCTTTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
||
| CDS-3UTR TCA 90 bp | GAAGGTTCTGAGCCCTGTGCTTCTCTGTCTCCACTTAGGAGGAGATCTCTCTTCTTCTCAATGCACTTCTaGTCTGAGGATGTGGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: EGSEPCASLSPLRRRSLFFSMHF*SEDVVA Trigger: AGCCACCACATCCTCAGATCAGAAGTGCATTGAGAA...GAAGAGAGATCTCCTCCTAAGTGGAGACAGAGAAGCACAGGGCTCAGAACCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170878.2 |
||
| CDS-3UTR TCA 90 bp | AATGCTCTTCTTTCTCAGATGGGTAGAGCTGACTGTGGGTCGCTTCTCACTGGATTCAGGCTCTGTAAGTaGGACAGGTTTCGGAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: NALLSQMGRADCGSLLTGFRLCK*DRFRSC Trigger: GCAACTCCGAAACCTGTCTCACTTACAGAGCCTGAA...TCCAGTGAGAAGCGACCCACAGTCAGCTCTACCCATCTGAGAAAGAAGAGCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
||
| CDS-3UTR TCA 90 bp | AGAAAGAGAGCAGTGGGTCAGAGTTGGCCCCAGCATAGCCAAGTTGGGTGGAGGTCCCAGTGTCTGAAGTaGGTTGGTCTTTTGAATATT | + |
|
Preference number: 4 (lower is better) Translates to: RKRAVGQSWPQHSQVGWRSQCLK*VGLLNI Trigger: AATATTCAAAAGACCAACTCACTTCAGACACTGGGA...CCTCCACCCAACTTGGCTATGCTGGGGCCAACTCTGACCCACTGCTCTCTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
||
| CDS-3UTR GCA 90 bp | ACTGGAGGGACTGCCTCTGTGTCTCACAGCCATGTCTGGTCCTCCAACCACAGTTTCGGAGTTGCAGGTTaGAACAATCAGAAGTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: TGGTASVSHSHVWSSNHSFGVAG*NNQKFQ Trigger: TTGAAACTTCTGATTGTTGCAACCTGCAACTCCGAA...ACTGTGGTTGGAGGACCAGACATGGCTGTGAGACACAGAGGCAGTCCCTCCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
||
| 3UTR CAA 72 bp | TTACACACTTGTGCACGTGAACACACACCCCTTTGTTaGCACACATGCGTACTGATGGCTCCCTCATCTACC | + |
|
Preference number: 4 (lower is better) Translates to: LHTCAREHTPLC*HTCVLMAPSST Trigger: GGTAGATGAGGGAGCCATCAGTACGCATGTGTGCAAACAAAGGGGTGTGTGTTCACGTGCACAAGTGTGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171267.2 |
||
| CDS-3UTR TCA 90 bp | ACTCATATGAGTAAGACATATGTTCAGAAAAGCTCAGTGAACCCCCAGCCCAGCAATGCACTTCTGATCTaGGGATGTGGTGGCTCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: THMSKTYVQKSSVNPQPSNALLI*GCGGSA Trigger: TGCCGAGCCACCACATCCTCAGATCAGAAGTGCATT...GCTGGGCTGGGGGTTCACTGAGCTTTTCTGAACATATGTCTTACTCATATGAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
||
| CDS-3UTR TCA 90 bp | GGGACTGCCTCTGTGTCTCACAGCCATGTCTGGTCCTCCAACCACAGTACCATGTTCCCTTTTGGAAAGTaGTTTCCCTGTAAGTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GTASVSHSHVWSSNHSTMFPFGK*FPCKFK Trigger: TTTGAACTTACAGGGAAATCACTTTCCAAAAGGGAA...CATGGTACTGTGGTTGGAGGACCAGACATGGCTGTGAGACACAGAGGCAGTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
||
| CDS-3UTR GCA 90 bp | AGAGAAAGAGAGCAGTGGGTCAGAGTTGGCCCCAGCATAGCCAAGTTGGGTGGATGGAGGAAATATGGTTaGTTCCGAGATAGAGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: REREQWVRVGPSIAKLGGWRKYG*FRDRDF Trigger: AAAGTCTCTATCTCGGAAGCAACCATATTTCCTCCA...TCCACCCAACTTGGCTATGCTGGGGCCAACTCTGACCCACTGCTCTCTTTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
||
| CDS-3UTR TCA 90 bp | CTGCCTCTGTGTCTCACAGCCATGTCTGGTCCTCCAACCACAGTACCATGGAAGAGTGAGTTGGTCTTTTaGATATTCCCTTTTGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LPLCLTAMSGPPTTVPWKSELVF*IFPFGK Trigger: CTTTCCAAAAGGGAATATTCAAAAGACCAACTCACT...CTTCCATGGTACTGTGGTTGGAGGACCAGACATGGCTGTGAGACACAGAGGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
||
| CDS-3UTR TCA 90 bp | AGACTTAGCTCGCGTGAGGATTATTTTAAGAAGGTTCTGAGCCCTGTGCTTCTCCTCTCAATGCACTTCTaGTCTGAGGATGTGGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RLSSREDYFKKVLSPVLLLSMHF*SEDVVA Trigger: AGCCACCACATCCTCAGATCAGAAGTGCATTGAGAG...GAGAAGCACAGGGCTCAGAACCTTCTTAAAATAATCCTCACGCGAGCTAAGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172138.2 |
||
| CDS-3UTR GCA 90 bp | AATGCTCTTCTTTCTCAGATGGGTAGAGCTGACTGTGGGTCGCTTCTCACTGGATGGATGAAGAACAGATaGTTCAATGCCTTAGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: NALLSQMGRADCGSLLTGWMKNR*FNALGP Trigger: TGGGCCTAAGGCATTGAAGCATCTGTTCTTCATCCA...TCCAGTGAGAAGCGACCCACAGTCAGCTCTACCCATCTGAGAAAGAAGAGCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
||
| CDS-3UTR CCA 90 bp | ATTAGTGGCTTGCTGGAGAGAGCTCATATCTTCTTTAGACAGGTAATGGATAGCGATCTGAGGATGTGGTaGCTCGGCAACTGGCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ISGLLERAHIFFRQVMDSDLRMW*LGNWPR Trigger: TCTTGGCCAGTTGCCGAGCCACCACATCCTCAGATC...GCTATCCATTACCTGTCTAAAGAAGATATGAGCTCTCTCCAGCAAGCCACTAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167144.2 |
||
| CDS-3UTR TCA 90 bp | CAGATTAGTGGCTTGCTGGAGAGAGCTCATATCTTCTTTAGACAGGTAATGGATAATGCACTTCTGATCTaGGGATGTGGTGGCTCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QISGLLERAHIFFRQVMDNALLI*GCGGSA Trigger: TGCCGAGCCACCACATCCTCAGATCAGAAGTGCATT...ATCCATTACCTGTCTAAAGAAGATATGAGCTCTCTCCAGCAAGCCACTAATCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167144.2 |
||
| CDS-3UTR CCA 90 bp | GAAAAGTCTGGTCACTCAAGGATGACAGTTTCTTCACTTGGGACAATTTTGCTAGATCTGAGGATGTGGTaGCTCGGCAACTGGCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: EKSGHSRMTVSSLGTILLDLRMW*LGNWPR Trigger: TCTTGGCCAGTTGCCGAGCCACCACATCCTCAGATC...TAGCAAAATTGTCCCAAGTGAAGAAACTGTCATCCTTGAGTGACCAGACTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
||
| CDS-3UTR CCA 90 bp | ATAGCACTCGGAATGCATTTCTTAGGAAAGGATAAACACACAAGCAGCTTCTCTGATCTGAGGATGTGGTaGCTCGGCAACTGGCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: IALGMHFLGKDKHTSSFSDLRMW*LGNWPR Trigger: TCTTGGCCAGTTGCCGAGCCACCACATCCTCAGATC...AGAGAAGCTGCTTGTGTGTTTATCCTTTCCTAAGAAATGCATTCCGAGTGCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171267.2 |
||
| 3UTR CAA 72 bp | AGCCTCAGGCTTCTCTCTTCTTTCCACATATGCAAGTaGCACACCCTCACTTGCTTTGGATATTTCTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLRLLSSFHICK*HTLTCFGYFCP Trigger: TGGGCAGAAATATCCAAAGCAAGTGAGGGTGTGCAACTTGCATATGTGGAAAGAAGAGAGAAGCCTGAGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171267.2 |
||
| CDS-3UTR TCA 90 bp | CCTCACTTGCTTTGGATATTTCTGCCCATTTGTTCTGAAACATTGCTTCAGCATAATGCACTTCTGATCTaGGGATGTGGTGGCTCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PHLLWIFLPICSETLLQHNALLI*GCGGSA Trigger: TGCCGAGCCACCACATCCTCAGATCAGAAGTGCATT...ATGCTGAAGCAATGTTTCAGAACAAATGGGCAGAAATATCCAAAGCAAGTGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171267.2 |
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| CDS-3UTR TCA 90 bp | TCCACATATGCAAGTTGCACACCCTCACTTGCTTTGGATATTTCTGCCCATTTGTTCTCAATGCACTTCTaGTCTGAGGATGTGGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: STYASCTPSLALDISAHLFSMHF*SEDVVA Trigger: AGCCACCACATCCTCAGATCAGAAGTGCATTGAGAA...CAAATGGGCAGAAATATCCAAAGCAAGTGAGGGTGTGCAACTTGCATATGTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171267.2 |
||
| CDS-3UTR TCA 90 bp | ATTAGTGGCTTGCTGGAGAGAGCTCATATCTTCTTTAGACAGGTAATGGATAGCTCCTCAATGCACTTCTaGTCTGAGGATGTGGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ISGLLERAHIFFRQVMDSSSMHF*SEDVVA Trigger: AGCCACCACATCCTCAGATCAGAAGTGCATTGAGGA...GCTATCCATTACCTGTCTAAAGAAGATATGAGCTCTCTCCAGCAAGCCACTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167144.2 |
||
| CDS-3UTR TCA 90 bp | CTAATAGAAAAGTCTGGTCACTCAAGGATGACAGTTTCTTCACTTGGGACAATTGTTCCTGGAGGCCACTaGAGCAATGGAATGTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LIEKSGHSRMTVSSLGTIVPGGH*SNGMCW Trigger: CCAACACATTCCATTGCTTCAGTGGCCTCCAGGAAC...AATTGTCCCAAGTGAAGAAACTGTCATCCTTGAGTGACCAGACTTTTCTATTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
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| CDS-3UTR TCA 90 bp | ACTCATATGAGTAAGACATATGTTCAGAAAAGCTCAGTGAACCCCCAGCCCAGCGGAAATTGGAAGCACTaGTTTGGCACAAATTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: THMSKTYVQKSSVNPQPSGNWKH*FGTNSQ Trigger: TTGAGAATTTGTGCCAAATCAGTGCTTCCAATTTCC...GCTGGGCTGGGGGTTCACTGAGCTTTTCTGAACATATGTCTTACTCATATGAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
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| CDS-3UTR GCA 90 bp | CATATGAGTAAGACATATGTTCAGAAAAGCTCAGTGAACCCCCAGCCCAGCCCTGTGTCCTCGAGTTTTTaGATGTTTTCTTTGTACCAT | + |
|
Preference number: 4 (lower is better) Translates to: HMSKTYVQKSSVNPQPSPVSSSF*MFSLYH Trigger: ATGGTACAAAGAAAACATGCAAAAACTCGAGGACAC...AGGGCTGGGCTGGGGGTTCACTGAGCTTTTCTGAACATATGTCTTACTCATATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
||
| CDS-3UTR CCA 90 bp | CTAATAGAAAAGTCTGGTCACTCAAGGATGACAGTTTCTTCACTTGGGACAATTATGTCAAGGAGGCTGTaGGAGAGATTCAGCACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LIEKSGHSRMTVSSLGTIMSRRL*ERFSTF Trigger: GAAGGTGCTGAATCTCTCCCACAGCCTCCTTGACAT...AATTGTCCCAAGTGAAGAAACTGTCATCCTTGAGTGACCAGACTTTTCTATTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
||
| CDS-3UTR TCA 90 bp | CTTAGCTCGCGTGAGGATTATTTTAAGAAGGTTCTGAGCCCTGTGCTTCTCTGTTGCCAGGAATTTCATTaGGACCTAAATTTTCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSSREDYFKKVLSPVLLCCQEFH*DLNFHS Trigger: ACTGTGAAAATTTAGGTCTCAATGAAATTCCTGGCA...ACAGAGAAGCACAGGGCTCAGAACCTTCTTAAAATAATCCTCACGCGAGCTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170878.2 |
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| CDS-3UTR TCA 90 bp | ACACTGAATCAATTACACACTTGTGCACGTGAACACACACCCCTTTGTTTGCACTGCCAGGAATTTCATTaGGACCTAAATTTTCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: TLNQLHTCAREHTPLCLHCQEFH*DLNFHS Trigger: ACTGTGAAAATTTAGGTCTCAATGAAATTCCTGGCA...GTGCAAACAAAGGGGTGTGTGTTCACGTGCACAAGTGTGTAATTGATTCAGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171267.2 |
||
| CDS-3UTR GCA 90 bp | AGTGGCTTGCTGGAGAGAGCTCATATCTTCTTTAGACAGGTAATGGATAGCATTTGGAGGAAATATGGTTaGTTCCGAGATAGAGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: SGLLERAHIFFRQVMDSIWRKYG*FRDRDF Trigger: AAAGTCTCTATCTCGGAAGCAACCATATTTCCTCCA...AATGCTATCCATTACCTGTCTAAAGAAGATATGAGCTCTCTCCAGCAAGCCACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167144.2 |
||
| CDS-3UTR CCA 90 bp | GAAAAGTCTGGTCACTCAAGGATGACAGTTTCTTCACTTGGGACAATTTTGCTACTGGATATTCCTGTTTaGATGAAGAACAGATGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: EKSGHSRMTVSSLGTILLLDIPV*MKNRCF Trigger: GAAGCATCTGTTCTTCATCCAAACAGGAATATCCAG...TAGCAAAATTGTCCCAAGTGAAGAAACTGTCATCCTTGAGTGACCAGACTTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
||
| CDS-3UTR GCA 90 bp | CTAATAGAAAAGTCTGGTCACTCAAGGATGACAGTTTCTTCACTTGGGACAATTACTAAGTGCTGTCTCTaGCATAAATATCAGGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: LIEKSGHSRMTVSSLGTITKCCL*HKYQGI Trigger: AATCCCCTGATATTTATGGCAGAGACAGCACTTAGT...AATTGTCCCAAGTGAAGAAACTGTCATCCTTGAGTGACCAGACTTTTCTATTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
||
| CDS-3UTR CCA 90 bp | GAAAAGTCTGGTCACTCAAGGATGACAGTTTCTTCACTTGGGACAATTTTGCTACCAAAGTTTAAACTTTaGAAGACAGCTGAGTCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: EKSGHSRMTVSSLGTILLPKFKL*KTAESK Trigger: TTTCGACTCAGCTGTCTTCCAAAGTTTAAACTTTGG...TAGCAAAATTGTCCCAAGTGAAGAAACTGTCATCCTTGAGTGACCAGACTTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
||
| 3UTR CAA 72 bp | CACTCAAGGATGACAGTTTCTTCACTTGGGACAATTTaGCTAAACACATTTATCTGCCTTCTCTGGAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: HSRMTVSSLGTI*LNTFICLLWKS Trigger: AGATTTCCAGAGAAGGCAGATAAATGTGTTTAGCAAAATTGTCCCAAGTGAAGAAACTGTCATCCTTGAGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
||
| 3UTR CAA 72 bp | CATGCTAAGCATACATTCTACCAATGGGCTATAGTCTaGCTCTTTTCTCATCAGGTATATGCAAAAGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: HAKHTFYQWAIV*LFSHQVYAKGV Trigger: AACTCCTTTTGCATATACCTGATGAGAAAAGAGCAAGACTATAGCCCATTGGTAGAATGTATGCTTAGCATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171267.2 |
||
| CDS-3UTR TCA 90 bp | CTAATAGAAAAGTCTGGTCACTCAAGGATGACAGTTTCTTCACTTGGGACAATTATATTCCTGTTTGGATaGAGAACAGATGCTTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: LIEKSGHSRMTVSSLGTIIFLFG*RTDASM Trigger: CATTGAAGCATCTGTTCTTCATCCAAACAGGAATAT...AATTGTCCCAAGTGAAGAAACTGTCATCCTTGAGTGACCAGACTTTTCTATTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
||
| CDS-3UTR CCA 90 bp | AAAGTCTGGTCACTCAAGGATGACAGTTTCTTCACTTGGGACAATTTTGCTAAAAACCGATGTTGGCTTTaGAAAGTATCTTCATGTATC | + |
|
Preference number: 4 (lower is better) Translates to: KVWSLKDDSFFTWDNFAKNRCWL*KVSSCI Trigger: GATACATGAAGATACTTTCCAAAGCCAACATCGGTT...TTTAGCAAAATTGTCCCAAGTGAAGAAACTGTCATCCTTGAGTGACCAGACTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
||
| CDS-3UTR CCA 90 bp | CTAGGAACTAATAGAAAAGTCTGGTCACTCAAGGATGACAGTTTCTTCACTTGGTTGGAAGCACTGATTTaGCACAAATTCTCAAACTTA | + |
|
Preference number: 4 (lower is better) Translates to: LGTNRKVWSLKDDSFFTWLEALI*HKFSNL Trigger: TAAGTTTGAGAATTTGTGCCAAATCAGTGCTTCCAA...CCAAGTGAAGAAACTGTCATCCTTGAGTGACCAGACTTTTCTATTAGTTCCTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
||
| CDS-3UTR CAA 90 bp | AGTTGGCCCCAGCATAGCCAAGTTGGGTGGAGGCTAGGCTGGGGGTGGGAGCCATCTGTTGGGAAACCTTaGGGGAGCTTAATGGAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SWPQHSQVGWRLGWGWEPSVGKP*GSLMEE Trigger: TTCCTCCATTAAGCTCCCCAAAGGTTTCCCAACAGA...TGGCTCCCACCCCCAGCCTAGCCTCCACCCAACTTGGCTATGCTGGGGCCAACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
||
| CDS-3UTR CAA 90 bp | AGAAAGAGAGCAGTGGGTCAGAGTTGGCCCCAGCATAGCCAAGTTGGGTGGAGGGTAAGGGAGGGGAAATaGGAAGCACTGATTTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RKRAVGQSWPQHSQVGWRVREGK*EALIWH Trigger: GTGCCAAATCAGTGCTTCCAATTTCCCCTCCCTTAC...CCTCCACCCAACTTGGCTATGCTGGGGCCAACTCTGACCCACTGCTCTCTTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
||
| CDS-3UTR CAA 90 bp | GGTCAGAGTTGGCCCCAGCATAGCCAAGTTGGGTGGAGGCTAGGCTGGGGGTGGACTTTCCAAGGTTTTTaGATTGTGCAGTGGGATAAA | + |
|
Preference number: 5 (lower is better) Translates to: GQSWPQHSQVGWRLGWGWTFQGF*IVQWDK Trigger: TTTATCCCACTGCACAATCAAAAAACCTTGGAAAGT...CCACCCCCAGCCTAGCCTCCACCCAACTTGGCTATGCTGGGGCCAACTCTGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
||
| CDS-3UTR CAA 90 bp | GCAGTGGGTCAGAGTTGGCCCCAGCATAGCCAAGTTGGGTGGAGGCTAGGCTGGGAGTTCTTCAAACCCTaGAAGATAACTAGCAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: AVGQSWPQHSQVGWRLGWEFFKP*KITSKF Trigger: GAACTTGCTAGTTATCTTCAAGGGTTTGAAGAACTC...CCAGCCTAGCCTCCACCCAACTTGGCTATGCTGGGGCCAACTCTGACCCACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
||
| CDS TCA 90 bp | TCAAATGCTGGAGTGCTGGCAGGCCATCGAAGAGCTGCTCACTGCTaGTGTCAAGGAGGCTGTGGGAGAGATTCAGCACCTTCAAAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: SNAGVLAGHRRAAHC*CQGGCGRDSAPSKD Trigger: ATCTTTTGAAGGTGCTGAATCTCTCCCACAGCCTCCTTGACATCAGCAGTGAGCAGCTCTTCGATGGCCTGCCAGCACTCCAGCATTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
||
| CDS TCA 90 bp | CCAGTACCGAGCTCAAGTCTCTTCGTGTTGCCCTTGATGGAAAGGTaGGTAAGGGAGGGGAAATTGGAAGCACTGATTTGGCACAAATTC | + |
|
Preference number: 5 (lower is better) Translates to: PVPSSSLFVLPLMER*VREGKLEALIWHKF Trigger: GAATTTGTGCCAAATCAGTGCTTCCAATTTCCCCTCCCTTACTCACCTTTCCATCAAGGGCAACACGAAGAGACTTGAGCTCGGTACTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
||
| CDS CCA 90 bp | TCAATACTGGATATTCCTCAATGCACTTCTGATCTGAGGATGTGGTaGCTCGGCAACTGGCCAAGAAGAGGGCCACTAAAAAGAAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SILDIPQCTSDLRMW*LGNWPRRGPLKRSS Trigger: GCTGCTTCTTTTTAGTGGCCCTCTTCTTGGCCAGTTGCCGAGCCACCACATCCTCAGATCAGAAGTGCATTGAGGAATATCCAGTATTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167144.2 |
||
| CDS-3UTR CAA 90 bp | ACTGGAGGGACTGCCTCTGTGTCTCACAGCCATGTCTGGTCCTCCAACCACAGTAACATTCTGTTGAGTTaGGTAAAGTGCCAGGAATTT | + |
|
Preference number: 5 (lower is better) Translates to: TGGTASVSHSHVWSSNHSNILLS*VKCQEF Trigger: AAATTCCTGGCACTTTACCAAACTCAACAGAATGTT...ACTGTGGTTGGAGGACCAGACATGGCTGTGAGACACAGAGGCAGTCCCTCCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
||
| CDS-3UTR CAA 90 bp | AATGCTCTTCTTTCTCAGATGGGTAGAGCTGACTGTGGGTCGCTTCTCACTGGATCCAGGAAGGTGAGATaGATAAGTCTGCTGAAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: NALLSQMGRADCGSLLTGSRKVR*ISLLKV Trigger: GACCTTCAGCAGACTTATCAATCTCACCTTCCTGGA...TCCAGTGAGAAGCGACCCACAGTCAGCTCTACCCATCTGAGAAAGAAGAGCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
||
| CDS-3UTR CAA 90 bp | AGAGAAAGAGAGCAGTGGGTCAGAGTTGGCCCCAGCATAGCCAAGTTGGGTGGATGTGTCCTCGAGTTTTaGCATGTTTTCTTTGTACCA | + |
|
Preference number: 5 (lower is better) Translates to: REREQWVRVGPSIAKLGGCVLEF*HVFFVP Trigger: TGGTACAAAGAAAACATGCAAAAACTCGAGGACACA...TCCACCCAACTTGGCTATGCTGGGGCCAACTCTGACCCACTGCTCTCTTTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
||
| CDS-3UTR CAA 90 bp | AAGTTTCTCCTGCTTAAACCGGTCCCTGTCATCTGGAGAGAGCCTCCCGGGTTCAACATTCTGTTGAGTTaGGTAAAGTGCCAGGAATTT | + |
|
Preference number: 5 (lower is better) Translates to: KFLLLKPVPVIWREPPGFNILLS*VKCQEF Trigger: AAATTCCTGGCACTTTACCAAACTCAACAGAATGTT...GAACCCGGGAGGCTCTCTCCAGATGACAGGGACCGGTTTAAGCAGGAGAAACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170878.2 |
||
| CDS-3UTR CAA 90 bp | AGAGAAAGAGAGCAGTGGGTCAGAGTTGGCCCCAGCATAGCCAAGTTGGGTGGAAAGCAATGGAATGTGTaGGAGGAAATGTTGAAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: REREQWVRVGPSIAKLGGKQWNV*EEMLKK Trigger: TTTCTTCAACATTTCCTCCAACACATTCCATTGCTT...TCCACCCAACTTGGCTATGCTGGGGCCAACTCTGACCCACTGCTCTCTTTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
||
| CDS TCA 90 bp | TTTTCACAGTTGTATGTTTTGTTGACTTCTTTCTCAATGCACTTCTaGTCTGAGGATGTGGTGGCTCGGCAACTGGCCAAGAAGAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: FSQLYVLLTSFSMHF*SEDVVARQLAKKRA Trigger: GGCCCTCTTCTTGGCCAGTTGCCGAGCCACCACATCCTCAGATCAGAAGTGCATTGAGAAAGAAGTCAACAAAACATACAACTGTGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022124.10 ENSMUST00000170878.2 ENSMUST00000171267.2 |
||
| CDS TCA 90 bp | TCTTTCACCTTTAGTCGAGTAAATGCCAAATCTAGGAGTTCTAGCTaGGGGCATTCTTTGAATGCCTCCGTCTTGAGGCTCAGGGGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SFTFSRVNAKSRSSS*GHSLNASVLRLRGS Trigger: TGAACCCCTGAGCCTCAAGACGGAGGCATTCAAAGAATGCCCTCAGCTAGAACTCCTAGATTTGGCATTTACTCGACTAAAGGTGAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
||
| CDS CCA 90 bp | AAATCAATACTGGATATTCCTCAATGCACTTCTGATCTGAGGATGTaGTGGCTCGGCAACTGGCCAAGAAGAGGGCCACTAAAAAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: KSILDIPQCTSDLRM*WLGNWPRRGPLKRS Trigger: GCTTCTTTTTAGTGGCCCTCTTCTTGGCCAGTTGCCGAGCCACCACATCCTCAGATCAGAAGTGCATTGAGGAATATCCAGTATTGATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167144.2 |
||
| CDS-3UTR CAA 90 bp | TCTCCACTTAGGAGGAGATCTCTCTTCAAGAAGCTGGCCAAGCAGCCTTCTCCTGTGCCAGGAATTTCATaGAGACCTAAATTTTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: SPLRRRSLFKKLAKQPSPVPGIS*RPKFSQ Trigger: CTGTGAAAATTTAGGTCTCAATGAAATTCCTGGCAC...AGGAGAAGGCTGCTTGGCCAGCTTCTTGAAGAGAGATCTCCTCCTAAGTGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170878.2 |
||
| CDS-3UTR CAA 90 bp | CATATGAGTAAGACATATGTTCAGAAAAGCTCAGTGAACCCCCAGCCCAGCCCTGCTGAAGGTCGTGTTTaGAATGGTAGGCAAGACATT | + |
|
Preference number: 5 (lower is better) Translates to: HMSKTYVQKSSVNPQPSPAEGRV*NGRQDI Trigger: AATGTCTTGCCTACCATTCAAAACACGACCTTCAGC...AGGGCTGGGCTGGGGGTTCACTGAGCTTTTCTGAACATATGTCTTACTCATATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
||
| CDS-3UTR CAA 90 bp | AGACTTAGCTCGCGTGAGGATTATTTTAAGAAGGTTCTGAGCCCTGTGCTTCTCTCCAGGAAGGTGAGATaGATAAGTCTGCTGAAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RLSSREDYFKKVLSPVLLSRKVR*ISLLKV Trigger: GACCTTCAGCAGACTTATCAATCTCACCTTCCTGGA...GAGAAGCACAGGGCTCAGAACCTTCTTAAAATAATCCTCACGCGAGCTAAGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170878.2 |
||
| CDS TCA 90 bp | GCCTGTTGTGACTCAGGTCTACATGATTCATCATCTTCAGACTGGTaGAGGCGTGCTGGTCAATGGAGGAGAGATCACAAAAGGATAAAA | + |
|
Preference number: 5 (lower is better) Translates to: ACCDSGLHDSSSSDW*RRAGQWRRDHKRIK Trigger: TTTTATCCTTTTGTGATCTCTCCTCCATTGACCAGCACGCCTTCACCAGTCTGAAGATGATGAATCATGTAGACCTGAGTCACAACAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
||
| CDS-3UTR CAA 90 bp | CACTTAGGAGGAGATCTCTCTTCAAGAAGCTGGCCAAGCAGCCTTCTCCTTTGCCAGTTGTATGTTTTGTaGACTTCTTTCTCAATGCAC | + |
|
Preference number: 5 (lower is better) Translates to: HLGGDLSSRSWPSSLLLCQLYVL*TSFSMH Trigger: GTGCATTGAGAAAGAAGTCAACAAAACATACAACTG...GCAAAGGAGAAGGCTGCTTGGCCAGCTTCTTGAAGAGAGATCTCCTCCTAAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170878.2 |
||
| CDS-3UTR CAA 90 bp | AGCTCGCGTGAGGATTATTTTAAGAAGGTTCTGAGCCCTGTGCTTCTCTGTCTCACTCCAAACATTCTGTaGAGTTTGGTAAAGTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SSREDYFKKVLSPVLLCLTPNIL*SLVKCQ Trigger: CTGGCACTTTACCAAACTCAACAGAATGTTTGGAGT...GAGACAGAGAAGCACAGGGCTCAGAACCTTCTTAAAATAATCCTCACGCGAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170878.2 |
||
| CDS-3UTR CAA 90 bp | CTTAGCTCGCGTGAGGATTATTTTAAGAAGGTTCTGAGCCCTGTGCTTCTCTGTGCTGAAGGTCGTGTTTaGAATGGTAGGCAAGACATT | + |
|
Preference number: 5 (lower is better) Translates to: LSSREDYFKKVLSPVLLCAEGRV*NGRQDI Trigger: AATGTCTTGCCTACCATTCAAAACACGACCTTCAGC...ACAGAGAAGCACAGGGCTCAGAACCTTCTTAAAATAATCCTCACGCGAGCTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170878.2 |
||
| CDS-3UTR CAA 90 bp | CTAGGAACTAATAGAAAAGTCTGGTCACTCAAGGATGACAGTTTCTTCACTTGGTTGAATGCCTCCGTCTaGAGGCTCAGGGGTTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: LGTNRKVWSLKDDSFFTWLNASV*RLRGSL Trigger: CAATGAACCCCTGAGCCTCAAGACGGAGGCATTCAA...CCAAGTGAAGAAACTGTCATCCTTGAGTGACCAGACTTTTCTATTAGTTCCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
||
| CDS-3UTR CAA 90 bp | ATTAGTGGCTTGCTGGAGAGAGCTCATATCTTCTTTAGACAGGTAATGGATAGCTCTGTTGGGAAACCTTaGGGGAGCTTAATGGAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: ISGLLERAHIFFRQVMDSSVGKP*GSLMEE Trigger: TTCCTCCATTAAGCTCCCCAAAGGTTTCCCAACAGA...GCTATCCATTACCTGTCTAAAGAAGATATGAGCTCTCTCCAGCAAGCCACTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167144.2 |
||
| CDS CCA 90 bp | ATATCTTCGTCATCCATGTCCTCAAATGTCCCCAGCCAAAGAGACTaGATCGTAGAGTTCTTCAAACCCTTGAAGATAACTAGCAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: ISSSSMSSNVPSQRD*IVEFFKPLKITSKF Trigger: GAACTTGCTAGTTATCTTCAAGGGTTTGAAGAACTCTACGATCCAGTCTCTTTGGCTGGGGACATTTGAGGACATGGATGACGAAGATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
||
| CDS TCA 90 bp | TGGATCGTAGAGTTCTTCAAACCCTTGAAGATAACTAGCAAGTTCTaGGTCCCTCCAAAGTTTAAACTTTGGAAGACAGCTGAGTCGAAA | + |
|
Preference number: 5 (lower is better) Translates to: WIVEFFKPLKITSKF*VPPKFKLWKTAESK Trigger: TTTCGACTCAGCTGTCTTCCAAAGTTTAAACTTTGGAGGGACTCAGAACTTGCTAGTTATCTTCAAGGGTTTGAAGAACTCTACGATCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
||
| CDS GCA 90 bp | GGGATAAAATCAATACTGGATATTCCTGTTTGGATGAAGAACAGATaGTTCAATGCCTTAGGCCCACTAAGTGCTGTCTCTGCCATAAAT | + |
|
Preference number: 5 (lower is better) Translates to: GIKSILDIPVWMKNR*FNALGPLSAVSAIN Trigger: ATTTATGGCAGAGACAGCACTTAGTGGGCCTAAGGCATTGAAGCATCTGTTCTTCATCCAAACAGGAATATCCAGTATTGATTTTATCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
||
| CDS-3UTR CAA 90 bp | ATAGCACTCGGAATGCATTTCTTAGGAAAGGATAAACACACAAGCAGCTTCTCTACTCCAAACATTCTGTaGAGTTTGGTAAAGTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: IALGMHFLGKDKHTSSFSTPNIL*SLVKCQ Trigger: CTGGCACTTTACCAAACTCAACAGAATGTTTGGAGT...AGAGAAGCTGCTTGTGTGTTTATCCTTTCCTAAGAAATGCATTCCGAGTGCTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171267.2 |
||
| CDS-3UTR CAA 90 bp | TATCGGAGACACTTGGGATGTAGAATACAGTTTTGCTTAAGTAAAATGTCAAGGTCCAGGAAGGTGAGATaGATAAGTCTGCTGAAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: YRRHLGCRIQFCLSKMSRSRKVR*ISLLKV Trigger: GACCTTCAGCAGACTTATCAATCTCACCTTCCTGGA...CCTTGACATTTTACTTAAGCAAAACTGTATTCTACATCCCAAGTGTCTCCGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171267.2 |
||
| CDS-3UTR CAA 90 bp | CTAATAGAAAAGTCTGGTCACTCAAGGATGACAGTTTCTTCACTTGGGACAATTACTCCAAACATTCTGTaGAGTTTGGTAAAGTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LIEKSGHSRMTVSSLGTITPNIL*SLVKCQ Trigger: CTGGCACTTTACCAAACTCAACAGAATGTTTGGAGT...AATTGTCCCAAGTGAAGAAACTGTCATCCTTGAGTGACCAGACTTTTCTATTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
||
| CDS-3UTR CAA 90 bp | ACTATGTGTCAGATGATAGATGGGGAAATGCTTCTTGAACTGGAAAACAGTAAAGCTGAAGGTCGTGTTTaGAATGGTAGGCAAGACATT | + |
|
Preference number: 5 (lower is better) Translates to: TMCQMIDGEMLLELENSKAEGRV*NGRQDI Trigger: AATGTCTTGCCTACCATTCAAAACACGACCTTCAGC...TTTACTGTTTTCCAGTTCAAGAAGCATTTCCCCATCTATCATCTGACACATAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171267.2 |
||
| CDS-3UTR CAA 90 bp | ATTAGTGGCTTGCTGGAGAGAGCTCATATCTTCTTTAGACAGGTAATGGATAGCACTTTCCAAGGTTTTTaGATTGTGCAGTGGGATAAA | + |
|
Preference number: 5 (lower is better) Translates to: ISGLLERAHIFFRQVMDSTFQGF*IVQWDK Trigger: TTTATCCCACTGCACAATCAAAAAACCTTGGAAAGT...GCTATCCATTACCTGTCTAAAGAAGATATGAGCTCTCTCCAGCAAGCCACTAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167144.2 |
||
| CDS-3UTR CAA 90 bp | GAAAAGTCTGGTCACTCAAGGATGACAGTTTCTTCACTTGGGACAATTTTGCTACAGTTGTATGTTTTGTaGACTTCTTTCTCAATGCAC | + |
|
Preference number: 5 (lower is better) Translates to: EKSGHSRMTVSSLGTILLQLYVL*TSFSMH Trigger: GTGCATTGAGAAAGAAGTCAACAAAACATACAACTG...TAGCAAAATTGTCCCAAGTGAAGAAACTGTCATCCTTGAGTGACCAGACTTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
||
| CDS-3UTR CAA 90 bp | CTAATAGAAAAGTCTGGTCACTCAAGGATGACAGTTTCTTCACTTGGGACAATTGTGCCAGGAATTTCATaGAGACCTAAATTTTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: LIEKSGHSRMTVSSLGTIVPGIS*RPKFSQ Trigger: CTGTGAAAATTTAGGTCTCAATGAAATTCCTGGCAC...AATTGTCCCAAGTGAAGAAACTGTCATCCTTGAGTGACCAGACTTTTCTATTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
||
| CDS-3UTR CAA 90 bp | ATAGCACTCGGAATGCATTTCTTAGGAAAGGATAAACACACAAGCAGCTTCTCTAACATTCTGTTGAGTTaGGTAAAGTGCCAGGAATTT | + |
|
Preference number: 5 (lower is better) Translates to: IALGMHFLGKDKHTSSFSNILLS*VKCQEF Trigger: AAATTCCTGGCACTTTACCAAACTCAACAGAATGTT...AGAGAAGCTGCTTGTGTGTTTATCCTTTCCTAAGAAATGCATTCCGAGTGCTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171267.2 |
||
| CDS-3UTR CAA 90 bp | ACTATGTGTCAGATGATAGATGGGGAAATGCTTCTTGAACTGGAAAACAGTAAACAGTTGTATGTTTTGTaGACTTCTTTCTCAATGCAC | + |
|
Preference number: 5 (lower is better) Translates to: TMCQMIDGEMLLELENSKQLYVL*TSFSMH Trigger: GTGCATTGAGAAAGAAGTCAACAAAACATACAACTG...TTTACTGTTTTCCAGTTCAAGAAGCATTTCCCCATCTATCATCTGACACATAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000171267.2 |
||
| CDS TCA 72 bp | GGAGTGCTGGCAGGCCATCGAAGAGCTGCTCACTGCTaGTGTCAAGGAGGCTGTGGGAGAGATTCAGCACCT | + |
|
Preference number: 6 (lower is better) Translates to: GVLAGHRRAAHC*CQGGCGRDSAP Trigger: AGGTGCTGAATCTCTCCCACAGCCTCCTTGACATCAGCAGTGAGCAGCTCTTCGATGGCCTGCCAGCACTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
||
| CDS GCA 72 bp | TTCAAATGCTGGAGTGCTGGCAGGCCATCGAAGAGCTaGTCACTGCTGATGTCAAGGAGGCTGTGGGAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: FKCWSAGRPSKS*SLLMSRRLWER Trigger: TCTCTCCCACAGCCTCCTTGACATCAGCAGTGAGCAGCTCTTCGATGGCCTGCCAGCACTCCAGCATTTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
||
| CDS TCA 72 bp | CTTAGTCCCACAAGTCCAGAAGGCAATTCACTCAGGTaGGTGGCTGTTAGGTCCAGTTCCTGGAGGCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: LSPTSPEGNSLR*VAVRSSSWRPL Trigger: CAGTGGCCTCCAGGAACTGGACCTAACAGCCACTCACCTGAGTGAATTGCCTTCTGGACTTGTGGGACTAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
||
| CDS TCA 72 bp | TCTCCTAGACAGACAGCTCTCAATGCACTTCTGATCTaGGGATGTGGTGGCTCGGCAACTGGCCAAGAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: SPRQTALNALLI*GCGGSATGQEE Trigger: CTCTTCTTGGCCAGTTGCCGAGCCACCACATCCTCAGATCAGAAGTGCATTGAGAGCTGTCTGTCTAGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172138.2 |
||
| CDS CCA 72 bp | CTGGATATTCCTCAATGCACTTCTGATCTGAGGATGTaGTGGCTCGGCAACTGGCCAAGAAGAGGGCCACTA | + |
|
Preference number: 6 (lower is better) Translates to: LDIPQCTSDLRM*WLGNWPRRGPL Trigger: TAGTGGCCCTCTTCTTGGCCAGTTGCCGAGCCACCACATCCTCAGATCAGAAGTGCATTGAGGAATATCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167144.2 |
||
| CDS CCA 72 bp | GACAGCTCTCAATGCACTTCTGATCTGAGGATGTGGTaGCTCGGCAACTGGCCAAGAAGAGGGCCACTAAAA | + |
|
Preference number: 6 (lower is better) Translates to: DSSQCTSDLRMW*LGNWPRRGPLK Trigger: TTTTAGTGGCCCTCTTCTTGGCCAGTTGCCGAGCCACCACATCCTCAGATCAGAAGTGCATTGAGAGCTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172138.2 |
||
| CDS CCA 72 bp | TCGAAGAGCTGCTCACTGCTGATGTCAAGGAGGCTGTaGGAGAGATTCAGCACCTTCAAAAGATGGAGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: SKSCSLLMSRRL*ERFSTFKRWRF Trigger: GAACCTCCATCTTTTGAAGGTGCTGAATCTCTCCCACAGCCTCCTTGACATCAGCAGTGAGCAGCTCTTCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
||
| CDS CCA 72 bp | CTTCTTTCTCAATGCACTTCTGATCTGAGGATGTGGTaGCTCGGCAACTGGCCAAGAAGAGGGCCACTAAAA | + |
|
Preference number: 6 (lower is better) Translates to: LLSQCTSDLRMW*LGNWPRRGPLK Trigger: TTTTAGTGGCCCTCTTCTTGGCCAGTTGCCGAGCCACCACATCCTCAGATCAGAAGTGCATTGAGAAAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022124.10 ENSMUST00000170878.2 ENSMUST00000171267.2 |
||
| CDS CCA 72 bp | GATATTCCTCAATGCACTTCTGATCTGAGGATGTGGTaGCTCGGCAACTGGCCAAGAAGAGGGCCACTAAAA | + |
|
Preference number: 6 (lower is better) Translates to: DIPQCTSDLRMW*LGNWPRRGPLK Trigger: TTTTAGTGGCCCTCTTCTTGGCCAGTTGCCGAGCCACCACATCCTCAGATCAGAAGTGCATTGAGGAATATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167144.2 |
||
| CDS TCA 72 bp | TGTTTTGTTGACTTCTTTCTCAATGCACTTCTGATCTaGGGATGTGGTGGCTCGGCAACTGGCCAAGAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: CFVDFFLNALLI*GCGGSATGQEE Trigger: CTCTTCTTGGCCAGTTGCCGAGCCACCACATCCTCAGATCAGAAGTGCATTGAGAAAGAAGTCAACAAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022124.10 ENSMUST00000170878.2 ENSMUST00000171267.2 |
||
| CDS TCA 72 bp | GACTCAGGTCTACATGATTCATCATCTTCAGACTGGTaGAGGCGTGCTGGTCAATGGAGGAGAGATCACAAA | + |
|
Preference number: 6 (lower is better) Translates to: DSGLHDSSSSDW*RRAGQWRRDHK Trigger: TTTGTGATCTCTCCTCCATTGACCAGCACGCCTTCACCAGTCTGAAGATGATGAATCATGTAGACCTGAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
||
| CDS TCA 72 bp | AATCAATACTGGATATTCCTCAATGCACTTCTGATCTaGGGATGTGGTGGCTCGGCAACTGGCCAAGAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: NQYWIFLNALLI*GCGGSATGQEE Trigger: CTCTTCTTGGCCAGTTGCCGAGCCACCACATCCTCAGATCAGAAGTGCATTGAGGAATATCCAGTATTGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167144.2 |
||
| CDS GCA 72 bp | GAAGAACAGATGCTTCAATGCCTTAGGCCCACTAAGTaGTGTCTCTGCCATAAATATCAGGGGATTTGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: EEQMLQCLRPTK*CLCHKYQGICG Trigger: ACCGCAAATCCCCTGATATTTATGGCAGAGACAGCACTTAGTGGGCCTAAGGCATTGAAGCATCTGTTCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
||
| CDS TCA 72 bp | TTGTATGTTTTGTTGACTTCTTTCTCAATGCACTTCTaGTCTGAGGATGTGGTGGCTCGGCAACTGGCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: LYVLLTSFSMHF*SEDVVARQLAK Trigger: CTTGGCCAGTTGCCGAGCCACCACATCCTCAGATCAGAAGTGCATTGAGAAAGAAGTCAACAAAACATACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022124.10 ENSMUST00000170878.2 ENSMUST00000171267.2 |
||
| CDS TCA 72 bp | TTTAGTCGAGTAAATGCCAAATCTAGGAGTTCTAGCTaGGGGCATTCTTTGAATGCCTCCGTCTTGAGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: FSRVNAKSRSSS*GHSLNASVLRL Trigger: GAGCCTCAAGACGGAGGCATTCAAAGAATGCCCTCAGCTAGAACTCCTAGATTTGGCATTTACTCGACTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
||
| CDS GCA 72 bp | TGCAGTGGGATAAAATCAATACTGGATATTCCTCAATaGACTTCTGATCTGAGGATGTGGTGGCTCGGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: CSGIKSILDIPQ*TSDLRMWWLGN Trigger: GTTGCCGAGCCACCACATCCTCAGATCAGAAGTGCATTGAGGAATATCCAGTATTGATTTTATCCCACTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167144.2 |
||
| CDS GCA 72 bp | GGATATTCCTGTTTGGATGAAGAACAGATGCTTCAATaGCTTAGGCCCACTAAGTGCTGTCTCTGCCATAAA | + |
|
Preference number: 6 (lower is better) Translates to: GYSCLDEEQMLQ*LRPTKCCLCHK Trigger: TTTATGGCAGAGACAGCACTTAGTGGGCCTAAGGCATTGAAGCATCTGTTCTTCATCCAAACAGGAATATCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
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| CDS CCA 72 bp | TCATCCATGTCCTCAAATGTCCCCAGCCAAAGAGACTaGATCGTAGAGTTCTTCAAACCCTTGAAGATAACT | + |
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Preference number: 6 (lower is better) Translates to: SSMSSNVPSQRD*IVEFFKPLKIT Trigger: AGTTATCTTCAAGGGTTTGAAGAACTCTACGATCCAGTCTCTTTGGCTGGGGACATTTGAGGACATGGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
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| CDS CAA 90 bp | GTCTTCCCAGTGTCTGAAGTGAGTTGGTCTTTTGAATATTCCCTTTaGGAAAGTGATTTCCCTGTAAGTTCAAATGCTGGAGTGCTGGCA | + |
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Preference number: 6 (lower is better) Translates to: VFPVSEVSWSFEYSL*ESDFPVSSNAGVLA Trigger: TGCCAGCACTCCAGCATTTGAACTTACAGGGAAATCACTTTCCAAAAGGGAATATTCAAAAGACCAACTCACTTCAGACACTGGGAAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
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| CDS CAA 72 bp | GTGCAGTGGGATAAAATCAATACTGGATATTCCTGTTaGGATGAAGAACAGATGCTTCAATGCCTTAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: VQWDKINTGYSC*DEEQMLQCLRP Trigger: GGGCCTAAGGCATTGAAGCATCTGTTCTTCATCCAAACAGGAATATCCAGTATTGATTTTATCCCACTGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
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| CDS CCA 72 bp | TGCAGTGGGATAAAATCAATACTGGATATTCCTGTTTaGATGAAGAACAGATGCTTCAATGCCTTAGGCCCA | + |
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Preference number: 6 (lower is better) Translates to: CSGIKSILDIPV*MKNRCFNALGP Trigger: TGGGCCTAAGGCATTGAAGCATCTGTTCTTCATCCAAACAGGAATATCCAGTATTGATTTTATCCCACTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
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| CDS CAA 72 bp | GAAGGTGAGATTGATAAGTCTGCTGAAGGTCGTGTTTaGAATGGTAGGCAAGACATTAAAGCTGAACTCCAA | + |
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Preference number: 6 (lower is better) Translates to: EGEIDKSAEGRV*NGRQDIKAELQ Trigger: TTGGAGTTCAGCTTTAATGTCTTGCCTACCATTCAAAACACGACCTTCAGCAGACTTATCAATCTCACCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022124.10 ENSMUST00000170878.2 ENSMUST00000171267.2 |
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| CDS CAA 90 bp | TTTTTGATTGTGCAGTGGGATAAAATCAATACTGGATATTCCTGTTaGGATGAAGAACAGATGCTTCAATGCCTTAGGCCCACTAAGTGC | + |
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Preference number: 6 (lower is better) Translates to: FLIVQWDKINTGYSC*DEEQMLQCLRPTKC Trigger: GCACTTAGTGGGCCTAAGGCATTGAAGCATCTGTTCTTCATCCAAACAGGAATATCCAGTATTGATTTTATCCCACTGCACAATCAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
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| CDS TCA 72 bp | GAGTTCTTCAAACCCTTGAAGATAACTAGCAAGTTCTaGGTCCCTCCAAAGTTTAAACTTTGGAAGACAGCT | + |
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Preference number: 6 (lower is better) Translates to: EFFKPLKITSKF*VPPKFKLWKTA Trigger: AGCTGTCTTCCAAAGTTTAAACTTTGGAGGGACTCAGAACTTGCTAGTTATCTTCAAGGGTTTGAAGAACTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
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| CDS CAA 72 bp | GTGTCTGAAGTGAGTTGGTCTTTTGAATATTCCCTTTaGGAAAGTGATTTCCCTGTAAGTTCAAATGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: VSEVSWSFEYSL*ESDFPVSSNAG Trigger: TCCAGCATTTGAACTTACAGGGAAATCACTTTCCAAAAGGGAATATTCAAAAGACCAACTCACTTCAGACAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022124.10 |
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