Pregenerated sensors for CD164L2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028865Ensembl transcript IDs: ENSMUST00000105910.2
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCACTAAGCCTGCGTGGTGCCCTTGTGCCTACAGGGACCAGAAACTaGTGGCCAACATTTGTCCCACCCCCAGTGCCCATAAAGCAACCA | + |
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Preference number: 1 (lower is better) Translates to: ALSLRGALVPTGTRN*WPTFVPPPVPIKQP Trigger: TGGTTGCTTTATGGGCACTGGGGGTGGGACAAATGTTGGCCACCAGTTTCTGGTCCCTGTAGGCACAAGGGCACCACGCAGGCTTAGTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105910.2 |
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| 3UTR CCA 90 bp | CTAAGCCTGCGTGGTGCCCTTGTGCCTACAGGGACCAGAAACTGGTaGCCAACATTTGTCCCACCCCCAGTGCCCATAAAGCAACCAAGA | + |
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Preference number: 1 (lower is better) Translates to: LSLRGALVPTGTRNW*PTFVPPPVPIKQPR Trigger: TCTTGGTTGCTTTATGGGCACTGGGGGTGGGACAAATGTTGGCCACCAGTTTCTGGTCCCTGTAGGCACAAGGGCACCACGCAGGCTTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105910.2 |
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| 3UTR CCA 90 bp | CCAGACCCAGGACAGGAAATGTCAGCCATCAGCACTAAGCCTGCGTaGTGCCCTTGTGCCTACAGGGACCAGAAACTGGTGGCCAACATT | + |
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Preference number: 1 (lower is better) Translates to: PDPGQEMSAISTKPA*CPCAYRDQKLVANI Trigger: AATGTTGGCCACCAGTTTCTGGTCCCTGTAGGCACAAGGGCACCACGCAGGCTTAGTGCTGATGGCTGACATTTCCTGTCCTGGGTCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105910.2 |
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| 3UTR GCA 90 bp | GACCCAGGACAGGAAATGTCAGCCATCAGCACTAAGCCTGCGTGGTaGCCTTGTGCCTACAGGGACCAGAAACTGGTGGCCAACATTTGT | + |
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Preference number: 1 (lower is better) Translates to: DPGQEMSAISTKPAW*PCAYRDQKLVANIC Trigger: ACAAATGTTGGCCACCAGTTTCTGGTCCCTGTAGGCACAAGGGCACCACGCAGGCTTAGTGCTGATGGCTGACATTTCCTGTCCTGGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105910.2 |
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| 3UTR-3UTR CCA 90 bp | AGACACGAGGTGGCTGGAGGGTGCTCTCAGCTGCAGGTACCAGACCCAGGACAGAGCACTAAGCCTGCGTaGTGCCCTTGTGCCTACAGG | + |
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Preference number: 2 (lower is better) Translates to: RHEVAGGCSQLQVPDPGQSTKPA*CPCAYR Trigger: CCTGTAGGCACAAGGGCACCACGCAGGCTTAGTGCT...CTGTCCTGGGTCTGGTACCTGCAGCTGAGAGCACCCTCCAGCCACCTCGTGTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105910.2 |
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| 3UTR CCA 72 bp | CTGCGTGGTGCCCTTGTGCCTACAGGGACCAGAAACTaGTGGCCAACATTTGTCCCACCCCCAGTGCCCATA | + |
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Preference number: 3 (lower is better) Translates to: LRGALVPTGTRN*WPTFVPPPVPI Trigger: TATGGGCACTGGGGGTGGGACAAATGTTGGCCACCAGTTTCTGGTCCCTGTAGGCACAAGGGCACCACGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105910.2 |
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| 3UTR GCA 72 bp | CAGGAAATGTCAGCCATCAGCACTAAGCCTGCGTGGTaGCCTTGTGCCTACAGGGACCAGAAACTGGTGGCC | + |
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Preference number: 3 (lower is better) Translates to: QEMSAISTKPAW*PCAYRDQKLVA Trigger: GGCCACCAGTTTCTGGTCCCTGTAGGCACAAGGGCACCACGCAGGCTTAGTGCTGATGGCTGACATTTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105910.2 |
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| 3UTR CCA 72 bp | CGTGGTGCCCTTGTGCCTACAGGGACCAGAAACTGGTaGCCAACATTTGTCCCACCCCCAGTGCCCATAAAG | + |
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Preference number: 3 (lower is better) Translates to: RGALVPTGTRNW*PTFVPPPVPIK Trigger: CTTTATGGGCACTGGGGGTGGGACAAATGTTGGCCACCAGTTTCTGGTCCCTGTAGGCACAAGGGCACCACG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105910.2 |
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| 3UTR CCA 72 bp | GGACAGGAAATGTCAGCCATCAGCACTAAGCCTGCGTaGTGCCCTTGTGCCTACAGGGACCAGAAACTGGTG | + |
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Preference number: 3 (lower is better) Translates to: GQEMSAISTKPA*CPCAYRDQKLV Trigger: CACCAGTTTCTGGTCCCTGTAGGCACAAGGGCACCACGCAGGCTTAGTGCTGATGGCTGACATTTCCTGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105910.2 |
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| CDS-3UTR CCA 90 bp | AGACACGAGGTGGCTGGAGGGTGCTCTCAGCTGCAGGTACCAGACCCAGGACAGTGTGGTCTTCAGGGATaGGGGGACTCCCTGTGGTAC | + |
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Preference number: 4 (lower is better) Translates to: RHEVAGGCSQLQVPDPGQCGLQG*GDSLWY Trigger: GTACCACAGGGAGTCCCCCCATCCCTGAAGACCACA...CTGTCCTGGGTCTGGTACCTGCAGCTGAGAGCACCCTCCAGCCACCTCGTGTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105910.2 |
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| CDS-3UTR CCA 90 bp | AGCACTAAGCCTGCGTGGTGCCCTTGTGCCTACAGGGACCAGAAACTGGTGGCCCCAGCTAGAACCAGCTaGGCACACAGGAGAAGGCAA | + |
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Preference number: 4 (lower is better) Translates to: STKPAWCPCAYRDQKLVAPARTS*AHRRRQ Trigger: TTGCCTTCTCCTGTGTGCCCAGCTGGTTCTAGCTGG...GGCCACCAGTTTCTGGTCCCTGTAGGCACAAGGGCACCACGCAGGCTTAGTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105910.2 |
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| CDS-3UTR CCA 90 bp | CTCAGGGGGCCCAGCAGGCTGGATGAGACACGAGGTGGCTGGAGGGTGCTCTCACAAATGGAGAAGTTGTaGGCTCTGTCCACACAGTGT | + |
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Preference number: 4 (lower is better) Translates to: LRGPSRLDETRGGWRVLSQMEKL*ALSTQC Trigger: ACACTGTGTGGACAGAGCCCACAACTTCTCCATTTG...TGAGAGCACCCTCCAGCCACCTCGTGTCTCATCCAGCCTGCTGGGCCCCCTGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105910.2 |
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| CDS-3UTR CCA 90 bp | CCTGCGTGGTGCCCTTGTGCCTACAGGGACCAGAAACTGGTGGCCAACATTTGTGGCCACACAGTGTCCTaGCTCCTCTGGCCCACATTG | + |
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Preference number: 4 (lower is better) Translates to: PAWCPCAYRDQKLVANICGHTVS*LLWPTL Trigger: CAATGTGGGCCAGAGGAGCCAGGACACTGTGTGGCC...ACAAATGTTGGCCACCAGTTTCTGGTCCCTGTAGGCACAAGGGCACCACGCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105910.2 |
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| CDS-3UTR TCA 90 bp | ACAGGGACCAGAAACTGGTGGCCAACATTTGTCCCACCCCCAGTGCCCATAAAGTTGAGCAACCCTCCTTaGCCACTTCAGCTTGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: TGTRNWWPTFVPPPVPIKLSNPP*PLQLGP Trigger: TGGCCCAAGCTGAAGTGGTCAAGGAGGGTTGCTCAA...CTTTATGGGCACTGGGGGTGGGACAAATGTTGGCCACCAGTTTCTGGTCCCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105910.2 |
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| CDS-3UTR CCA 90 bp | ACAGGGACCAGAAACTGGTGGCCAACATTTGTCCCACCCCCAGTGCCCATAAAGTTGACCACTTCAGCTTaGGCCACACAGTGTCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: TGTRNWWPTFVPPPVPIKLTTSA*ATQCPG Trigger: GCCAGGACACTGTGTGGCCCAAGCTGAAGTGGTCAA...CTTTATGGGCACTGGGGGTGGGACAAATGTTGGCCACCAGTTTCTGGTCCCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105910.2 |
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| CDS-3UTR CCA 90 bp | CTTGTGCCTACAGGGACCAGAAACTGGTGGCCAACATTTGTCCCACCCCCAGTGACTCCCTGTGGTACTTaGCTTCGGTTCCTCTGTGGA | + |
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Preference number: 4 (lower is better) Translates to: LVPTGTRNWWPTFVPPPVTPCGT*LRFLCG Trigger: TCCACAGAGGAACCGAAGCCAAGTACCACAGGGAGT...CACTGGGGGTGGGACAAATGTTGGCCACCAGTTTCTGGTCCCTGTAGGCACAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105910.2 |
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| CDS-3UTR CCA 90 bp | TGTCAGCCATCAGCACTAAGCCTGCGTGGTGCCCTTGTGCCTACAGGGACCAGAAGCTCCATCAAAACCTaGGCTGTGGTCTTCAGGGAT | + |
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Preference number: 4 (lower is better) Translates to: CQPSALSLRGALVPTGTRSSIKT*AVVFRD Trigger: ATCCCTGAAGACCACAGCCCAGGTTTTGATGGAGCT...TCTGGTCCCTGTAGGCACAAGGGCACCACGCAGGCTTAGTGCTGATGGCTGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105910.2 |
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| CDS-3UTR TCA 90 bp | AGCTGCAGGTACCAGACCCAGGACAGGAAATGTCAGCCATCAGCACTAAGCCTGTGCTGTCCTTGGCCTTaGGGAAGCGAAGCACAAAGA | + |
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Preference number: 4 (lower is better) Translates to: SCRYQTQDRKCQPSALSLCCPWP*GSEAQR Trigger: TCTTTGTGCTTCGCTTCCTCAAGGCCAAGGACAGCA...CAGGCTTAGTGCTGATGGCTGACATTTCCTGTCCTGGGTCTGGTACCTGCAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105910.2 |
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| CDS-3UTR CCA 90 bp | CCTACAGGGACCAGAAACTGGTGGCCAACATTTGTCCCACCCCCAGTGCCCATAGCTGCCAGACACAAATaGAGAAGTTGTGGGCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: PTGTRNWWPTFVPPPVPIAARHK*RSCGLC Trigger: ACAGAGCCCACAACTTCTCCATTTGTGTCTGGCAGC...TATGGGCACTGGGGGTGGGACAAATGTTGGCCACCAGTTTCTGGTCCCTGTAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105910.2 |
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| CDS-3UTR CCA 90 bp | CTTGTGCCTACAGGGACCAGAAACTGGTGGCCAACATTTGTCCCACCCCCAGTGGCTTCGGTTCCTCTGTaGAATGATGATGGGAAGCTG | + |
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Preference number: 4 (lower is better) Translates to: LVPTGTRNWWPTFVPPPVASVPL*NDDGKL Trigger: CAGCTTCCCATCATCATTCCACAGAGGAACCGAAGC...CACTGGGGGTGGGACAAATGTTGGCCACCAGTTTCTGGTCCCTGTAGGCACAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105910.2 |
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| CDS-3UTR GCA 90 bp | ACAGGGACCAGAAACTGGTGGCCAACATTTGTCCCACCCCCAGTGCCCATAAAGCACAAAGAAAGCTGTTaGTTGCAGGCTCAGTACCAG | + |
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Preference number: 4 (lower is better) Translates to: TGTRNWWPTFVPPPVPIKHKESC*LQAQYQ Trigger: CTGGTACTGAGCCTGCAAGCAACAGCTTTCTTTGTG...CTTTATGGGCACTGGGGGTGGGACAAATGTTGGCCACCAGTTTCTGGTCCCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105910.2 |
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| CDS-3UTR CAA 90 bp | CTCAGGGGGCCCAGCAGGCTGGATGAGACACGAGGTGGCTGGAGGGTGCTCTCAATTGAGCAACCCTCCTaGACCACTTCAGCTTGGGCC | + |
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Preference number: 5 (lower is better) Translates to: LRGPSRLDETRGGWRVLSIEQPS*TTSAWA Trigger: GGCCCAAGCTGAAGTGGTCAAGGAGGGTTGCTCAAT...TGAGAGCACCCTCCAGCCACCTCGTGTCTCATCCAGCCTGCTGGGCCCCCTGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105910.2 |
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| CDS CCA 90 bp | CTGTCCACACAGTGTTCACAGTGTCCCAGGTGTTTGCAGCCCCCTTaGGTAGTAGGCCAAACGTTCAGGCGGAGCAGGGCTCCCCGACCA | + |
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Preference number: 5 (lower is better) Translates to: LSTQCSQCPRCLQPP*VVGQTFRRSRAPRP Trigger: TGGTCGGGGAGCCCTGCTCCGCCTGAACGTTTGGCCTACTACCCAAGGGGGCTGCAAACACCTGGGACACTGTGAACACTGTGTGGACAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105910.2 |
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| CDS-3UTR CAA 90 bp | GCAGGCTGGATGAGACACGAGGTGGCTGGAGGGTGCTCTCAGCTGCAGGTACCACTTGACCACTTCAGCTaGGGCCACACAGTGTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: AGWMRHEVAGGCSQLQVPLDHFS*GHTVSW Trigger: CCAGGACACTGTGTGGCCCAAGCTGAAGTGGTCAAG...TGGTACCTGCAGCTGAGAGCACCCTCCAGCCACCTCGTGTCTCATCCAGCCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105910.2 |
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| CDS-3UTR CAA 90 bp | AGCACTAAGCCTGCGTGGTGCCCTTGTGCCTACAGGGACCAGAAACTGGTGGCCACACAAATGGAGAAGTaGTGGGCTCTGTCCACACAG | + |
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Preference number: 5 (lower is better) Translates to: STKPAWCPCAYRDQKLVATQMEK*WALSTQ Trigger: CTGTGTGGACAGAGCCCACAACTTCTCCATTTGTGT...GGCCACCAGTTTCTGGTCCCTGTAGGCACAAGGGCACCACGCAGGCTTAGTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105910.2 |
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| CDS-3UTR CAA 90 bp | AGCACTAAGCCTGCGTGGTGCCCTTGTGCCTACAGGGACCAGAAACTGGTGGCCAAAGAAAGCTGTTGCTaGCAGGCTCAGTACCAGCAC | + |
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Preference number: 5 (lower is better) Translates to: STKPAWCPCAYRDQKLVAKESCC*QAQYQH Trigger: GTGCTGGTACTGAGCCTGCAAGCAACAGCTTTCTTT...GGCCACCAGTTTCTGGTCCCTGTAGGCACAAGGGCACCACGCAGGCTTAGTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105910.2 |
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| CDS-3UTR CAA 90 bp | CTTGTGCCTACAGGGACCAGAAACTGGTGGCCAACATTTGTCCCACCCCCAGTGGTGCTGTCCTTGGCCTaGAGGAAGCGAAGCACAAAG | + |
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Preference number: 5 (lower is better) Translates to: LVPTGTRNWWPTFVPPPVVLSLA*RKRSTK Trigger: CTTTGTGCTTCGCTTCCTCAAGGCCAAGGACAGCAC...CACTGGGGGTGGGACAAATGTTGGCCACCAGTTTCTGGTCCCTGTAGGCACAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105910.2 |
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| CDS TCA 90 bp | AAGCTGGGCATGACTCTGAGTGGTTATAGATTGAGCAACCCTCCTTaGCCACTTCAGCTTGGGCCACACAGTGTCCTGGCTCCTCTGGCC | + |
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Preference number: 5 (lower is better) Translates to: KLGMTLSGYRLSNPP*PLQLGPHSVLAPLA Trigger: GGCCAGAGGAGCCAGGACACTGTGTGGCCCAAGCTGAAGTGGTCAAGGAGGGTTGCTCAATCTATAACCACTCAGAGTCATGCCCAGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105910.2 |
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| CDS CCA 90 bp | GGCTCCTCTGGCCCACATTGCTGCCAGACACAAATGGAGAAGTTGTaGGCTCTGTCCACACAGTGTTCACAGTGTCCCAGGTGTTTGCAG | + |
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Preference number: 5 (lower is better) Translates to: GSSGPHCCQTQMEKL*ALSTQCSQCPRCLQ Trigger: CTGCAAACACCTGGGACACTGTGAACACTGTGTGGACAGAGCCCACAACTTCTCCATTTGTGTCTGGCAGCAATGTGGGCCAGAGGAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105910.2 |
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| CDS GCA 90 bp | CTGTCCTTGGCCTTGAGGAAGCGAAGCACAAAGAAAGCTGTTGCTTaGAGGCTCAGTACCAGCACGATGCCCCCAATGAAGCTAGCTCCA | + |
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Preference number: 5 (lower is better) Translates to: LSLALRKRSTKKAVA*RLSTSTMPPMKLAP Trigger: TGGAGCTAGCTTCATTGGGGGCATCGTGCTGGTACTGAGCCTGCAAGCAACAGCTTTCTTTGTGCTTCGCTTCCTCAAGGCCAAGGACAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105910.2 |
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| CDS GCA 90 bp | AGTGCTGTCCTTGGCCTTGAGGAAGCGAAGCACAAAGAAAGCTGTTaGTTGCAGGCTCAGTACCAGCACGATGCCCCCAATGAAGCTAGC | + |
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Preference number: 5 (lower is better) Translates to: SAVLGLEEAKHKESC*LQAQYQHDAPNEAS Trigger: GCTAGCTTCATTGGGGGCATCGTGCTGGTACTGAGCCTGCAAGCAACAGCTTTCTTTGTGCTTCGCTTCCTCAAGGCCAAGGACAGCACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105910.2 |
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| CDS-3UTR CAA 90 bp | TACAGGGACCAGAAACTGGTGGCCAACATTTGTCCCACCCCCAGTGCCCATAAAGCACAAAGAAAGCTGTaGCTTGCAGGCTCAGTACCA | + |
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Preference number: 5 (lower is better) Translates to: YRDQKLVANICPTPSAHKAQRKL*LAGSVP Trigger: TGGTACTGAGCCTGCAAGCAACAGCTTTCTTTGTGC...TTTATGGGCACTGGGGGTGGGACAAATGTTGGCCACCAGTTTCTGGTCCCTGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105910.2 |
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| CDS CAA 90 bp | TCTGTCCACACAGTGTTCACAGTGTCCCAGGTGTTTGCAGCCCCCTaGGGTAGTAGGCCAAACGTTCAGGCGGAGCAGGGCTCCCCGACC | + |
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Preference number: 6 (lower is better) Translates to: SVHTVFTVSQVFAAP*GSRPNVQAEQGSPT Trigger: GGTCGGGGAGCCCTGCTCCGCCTGAACGTTTGGCCTACTACCCAAGGGGGCTGCAAACACCTGGGACACTGTGAACACTGTGTGGACAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105910.2 |
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| CDS CAA 90 bp | CCTGGCTCCTCTGGCCCACATTGCTGCCAGACACAAATGGAGAAGTaGTGGGCTCTGTCCACACAGTGTTCACAGTGTCCCAGGTGTTTG | + |
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Preference number: 6 (lower is better) Translates to: PGSSGPHCCQTQMEK*WALSTQCSQCPRCL Trigger: CAAACACCTGGGACACTGTGAACACTGTGTGGACAGAGCCCACAACTTCTCCATTTGTGTCTGGCAGCAATGTGGGCCAGAGGAGCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105910.2 |
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| CDS CAA 90 bp | GCTGTCCTTGGCCTTGAGGAAGCGAAGCACAAAGAAAGCTGTTGCTaGCAGGCTCAGTACCAGCACGATGCCCCCAATGAAGCTAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: AVLGLEEAKHKESCC*QAQYQHDAPNEASS Trigger: GGAGCTAGCTTCATTGGGGGCATCGTGCTGGTACTGAGCCTGCAAGCAACAGCTTTCTTTGTGCTTCGCTTCCTCAAGGCCAAGGACAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105910.2 |
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| CDS GCA 72 bp | GCCTTGAGGAAGCGAAGCACAAAGAAAGCTGTTGCTTaGAGGCTCAGTACCAGCACGATGCCCCCAATGAAG | + |
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Preference number: 6 (lower is better) Translates to: ALRKRSTKKAVA*RLSTSTMPPMK Trigger: CTTCATTGGGGGCATCGTGCTGGTACTGAGCCTGCAAGCAACAGCTTTCTTTGTGCTTCGCTTCCTCAAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105910.2 |
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| CDS CAA 72 bp | GGCCTTGAGGAAGCGAAGCACAAAGAAAGCTGTTGCTaGCAGGCTCAGTACCAGCACGATGCCCCCAATGAA | + |
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Preference number: 6 (lower is better) Translates to: GLEEAKHKESCC*QAQYQHDAPNE Trigger: TTCATTGGGGGCATCGTGCTGGTACTGAGCCTGCAAGCAACAGCTTTCTTTGTGCTTCGCTTCCTCAAGGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105910.2 |
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