Pregenerated sensors for CD160 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038304Ensembl transcript IDs: ENSMUST00000047702.8, ENSMUST00000107074.8, ENSMUST00000165991.8
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAGATTTATTTAGTGTGTGTGTGTGTGTCGGGGGATGCGAGTGAGTaGGTGAGTGCAGATGCATGTGCTCATAGAGGCCTGAAGAGGGTG | + |
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Preference number: 1 (lower is better) Translates to: KIYLVCVCVSGDASE*VSADACAHRGLKRV Trigger: CACCCTCTTCAGGCCTCTATGAGCACATGCATCTGCACTCACGCACTCACTCGCATCCCCCGACACACACACACACACTAAATAAATCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| 3UTR CCA 90 bp | ATCTCTTCAGCTCCTTTCCTCTTATCTTTTAAAAACGTGCTTATTTaGGGCTGGCGAGACAGCTCAGCAGCTGAAAGCACTTGCACAAGC | + |
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Preference number: 1 (lower is better) Translates to: ISSAPFLLSFKNVLI*GWRDSSAAESTCTS Trigger: GCTTGTGCAAGTGCTTTCAGCTGCTGAGCTGTCTCGCCAGCCCCAAATAAGCACGTTTTTAAAAGATAAGAGGAAAGGAGCTGAAGAGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| 3UTR TCA 90 bp | GGAACCTTCCCTGTATTTGGATGTGGTGTTGAGATGACTGTGGTCTaGGTAATTCCAGAAGATTCTCTGAAGAGTAAAAGGCAAATGACT | + |
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Preference number: 1 (lower is better) Translates to: GTFPVFGCGVEMTVV*VIPEDSLKSKRQMT Trigger: AGTCATTTGCCTTTTACTCTTCAGAGAATCTTCTGGAATTACTCAGACCACAGTCATCTCAACACCACATCCAAATACAGGGAAGGTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| 3UTR TCA 90 bp | TGGGTTTGTAGGTTCTTTGTAATAGCTCAGTGGCTTCACAAATTGTaGATTATTCATATAGATTTTGGGCTTCATACACGAAAGTTCACG | + |
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Preference number: 1 (lower is better) Translates to: WVCRFFVIAQWLHKL*IIHIDFGLHTRKFT Trigger: CGTGAACTTTCGTGTATGAAGCCCAAAATCTATATGAATAATTCACAATTTGTGAAGCCACTGAGCTATTACAAAGAACCTACAAACCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| 3UTR-3UTR CCA 90 bp | CCAACCTCGCTCTGGCAGTCAGGAAGGAGATCCAGAGGTATACCAACTGTTCTGTTTTGTTGCCTGGGGTaGAGGCACGGCACCCAGTGG | + |
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Preference number: 2 (lower is better) Translates to: PTSLWQSGRRSRGIPTVLFCCLG*RHGTQW Trigger: CCACTGGGTGCCGTGCCTCCACCCCAGGCAACAAAA...CAGAACAGTTGGTATACCTCTGGATCTCCTTCCTGACTGCCAGAGCGAGGTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGTTTCCTCTGACCTCCGTGTGTGTGCAGTGCTCTCACAAATGCCTCATGCATGCACGGGTTGGACCTaGAATGTGGCAGGCAAACAC | + |
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Preference number: 2 (lower is better) Translates to: RVSSDLRVCAVLSQMPHACTGWT*NVAGKH Trigger: GTGTTTGCCTGCCACATTGCAGGTCCAACCCGTGCA...TGCATGAGGCATTTGTGAGAGCACTGCACACACACGGAGGTCAGAGGAAACTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| 3UTR-3UTR GCA 90 bp | CTTATTTGGGGCTGGCGAGACAGCTCAGCAGCTGAAAGCACTTGCACAAGCCAGTCCGTGTGTGTGCAGTaGTCTCACAAATGCCTCATG | + |
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Preference number: 2 (lower is better) Translates to: LIWGWRDSSAAESTCTSQSVCVQ*SHKCLM Trigger: CATGAGGCATTTGTGAGAGCACTGCACACACACGGA...CTGGCTTGTGCAAGTGCTTTCAGCTGCTGAGCTGTCTCGCCAGCCCCAAATAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGGCCCTTTGAAGCTGAGGCTTATGGGAACTGTTGGCTTGTTACATGGGTGCAAGCCAACCTCGCTCTaGCAGTCAGGAAGGAGATCC | + |
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Preference number: 2 (lower is better) Translates to: SGPLKLRLMGTVGLLHGCKPTSL*QSGRRS Trigger: GGATCTCCTTCCTGACTGCCAGAGCGAGGTTGGCTT...GCACCCATGTAACAAGCCAACAGTTCCCATAAGCCTCAGCTTCAAAGGGCCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| 3UTR-3UTR GCA 90 bp | TCAGCAACATTTGCAAAACGTTTTCTTTATTGGCACCGAGGTGGGAGAAGCCAATGCACGGGTTGGACCTaGAATGTGGCAGGCAAACAC | + |
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Preference number: 2 (lower is better) Translates to: SATFAKRFLYWHRGGRSQCTGWT*NVAGKH Trigger: GTGTTTGCCTGCCACATTGCAGGTCCAACCCGTGCA...TTGGCTTCTCCCACCTCGGTGCCAATAAAGAAAACGTTTTGCAAATGTTGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| 3UTR-3UTR CCA 90 bp | AGTTCAGTGCCTGTGAATGTCTTGTTAAACGAGCAGAGATCATATGTCTTGTGTTCAGAGGACAGCCTGTaGGAGTCAGTTCTCTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: SSVPVNVLLNEQRSYVLCSEDSL*ESVLSL Trigger: GAGGGAGAGAACTGACTCCCACAGGCTGTCCTCTGA...ACACAAGACATATGATCTCTGCTCGTTTAACAAGACATTCACAGGCACTGAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| 3UTR-3UTR TCA 90 bp | TCTCTTTTGGTTCCGAATATAGGGTCTTATTTGATTCTTAGAAAAACACTGTGGCAGTTCCAGGGGATCTaGTGCCCTTGTCTGGGCACC | + |
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Preference number: 2 (lower is better) Translates to: SLLVPNIGSYLILRKTLWQFQGI*CPCLGT Trigger: GGTGCCCAGACAAGGGCATCAGATCCCCTGGAACTG...CCACAGTGTTTTTCTAAGAATCAAATAAGACCCTATATTCGGAACCAAAAGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| 3UTR-3UTR CCA 90 bp | GAAACATTATTCTGTGGTATAAAACATACCTGGCATTCAAGGACTATACATCAGAGGCACGGCACCCAGTaGAGATCAGAGGACAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: ETLFCGIKHTWHSRTIHQRHGTQ*RSEDSL Trigger: CAGGCTGTCCTCTGATCTCCACTGGGTGCCGTGCCT...CTGATGTATAGTCCTTGAATGCCAGGTATGTTTTATACCACAGAATAATGTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| 3UTR-3UTR CCA 90 bp | TCTCTTTTGGTTCCGAATATAGGGTCTTATTTGATTCTTAGAAAAACACTGTGGTTTTGTTGCCTGGGGTaGAGGCACGGCACCCAGTGG | + |
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Preference number: 2 (lower is better) Translates to: SLLVPNIGSYLILRKTLWFCCLG*RHGTQW Trigger: CCACTGGGTGCCGTGCCTCCACCCCAGGCAACAAAA...CCACAGTGTTTTTCTAAGAATCAAATAAGACCCTATATTCGGAACCAAAAGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| 3UTR-3UTR GCA 90 bp | GTGTGCACTTCAGTTAATACAATATGCTATATGGAACCTTCCCTGTATTTGGATTGCACGGGTTGGACCTaGAATGTGGCAGGCAAACAC | + |
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Preference number: 2 (lower is better) Translates to: VCTSVNTICYMEPSLYLDCTGWT*NVAGKH Trigger: GTGTTTGCCTGCCACATTGCAGGTCCAACCCGTGCA...ATCCAAATACAGGGAAGGTTCCATATAGCATATTGTATTAACTGAAGTGCACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| 3UTR-3UTR GCA 90 bp | GTGTGCACTTCAGTTAATACAATATGCTATATGGAACCTTCCCTGTATTTGGATGGGGATGCGAGTGAGTaGGTGAGTGCAGATGCATGT | + |
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Preference number: 2 (lower is better) Translates to: VCTSVNTICYMEPSLYLDGDASE*VSADAC Trigger: ACATGCATCTGCACTCACGCACTCACTCGCATCCCC...ATCCAAATACAGGGAAGGTTCCATATAGCATATTGTATTAACTGAAGTGCACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| 3UTR-3UTR CCA 90 bp | CATTCAAGGACTATACATCAGCAACATTTGCAAAACGTTTTCTTTATTGGCACCTCAGAGGACAGCCTGTaGGAGTCAGTTCTCTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: HSRTIHQQHLQNVFFIGTSEDSL*ESVLSL Trigger: GAGGGAGAGAACTGACTCCCACAGGCTGTCCTCTGA...GGTGCCAATAAAGAAAACGTTTTGCAAATGTTGCTGATGTATAGTCCTTGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| 3UTR-3UTR CCA 90 bp | AGTTCAGTGCCTGTGAATGTCTTGTTAAACGAGCAGAGATCATATGTCTTGTGTGCTTATTTTATTGTGTaGAGGGGAAACATTATTCTG | + |
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Preference number: 2 (lower is better) Translates to: SSVPVNVLLNEQRSYVLCAYFIV*RGNIIL Trigger: CAGAATAATGTTTCCCCTCCACACAATAAAATAAGC...ACACAAGACATATGATCTCTGCTCGTTTAACAAGACATTCACAGGCACTGAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| 3UTR-3UTR GCA 90 bp | TCTCTTTTGGTTCCGAATATAGGGTCTTATTTGATTCTTAGAAAAACACTGTGGCTCACAAATGCCTCATaGACACACATACAATTAAAA | + |
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Preference number: 2 (lower is better) Translates to: SLLVPNIGSYLILRKTLWLTNAS*THIQLK Trigger: TTTTAATTGTATGTGTGTGCATGAGGCATTTGTGAG...CCACAGTGTTTTTCTAAGAATCAAATAAGACCCTATATTCGGAACCAAAAGAGA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| 3UTR CCA 72 bp | ACACTGGAAGCTAGCGAGCCCCAGCAATCCTGTCTCTaGCCCTTTGAAGCTGAGGCTTATGGGAACTGTTGG | + |
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Preference number: 3 (lower is better) Translates to: TLEASEPQQSCL*PFEAEAYGNCW Trigger: CCAACAGTTCCCATAAGCCTCAGCTTCAAAGGGCCAGAGACAGGATTGCTGGGGCTCGCTAGCTTCCAGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| 3UTR TCA 72 bp | CATGGTAGAAGAGAGCTAACTCCCAAGAGTTTCCTCTaGCCTCCGTGTGTGTGCAGTGCTCTCACAAATGCC | + |
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Preference number: 3 (lower is better) Translates to: HGRRELTPKSFL*PPCVCSALTNA Trigger: GGCATTTGTGAGAGCACTGCACACACACGGAGGTCAGAGGAAACTCTTGGGAGTTAGCTCTCTTCTACCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| 3UTR CCA 72 bp | CAATGTGGCAGGCAAACACCTTTACCCTTGACCGTCTaGCCGGCCCCAGTGTTCAGAGTATATCCGTTTTAT | + |
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Preference number: 3 (lower is better) Translates to: QCGRQTPLPLTV*PAPVFRVYPFY Trigger: ATAAAACGGATATACTCTGAACACTGGGGCCGGCCAGACGGTCAAGGGTAAAGGTGTTTGCCTGCCACATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| 3UTR CCA 72 bp | CTCTGGCCCTTTGAAGCTGAGGCTTATGGGAACTGTTaGCTTGTTACATGGGTGCTGAGATGCAAACACCAG | + |
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Preference number: 3 (lower is better) Translates to: LWPFEAEAYGNC*LVTWVLRCKHQ Trigger: CTGGTGTTTGCATCTCAGCACCCATGTAACAAGCCAACAGTTCCCATAAGCCTCAGCTTCAAAGGGCCAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| 3UTR TCA 72 bp | TGTTACATGGGTGCTGAGATGCAAACACCAGTGTTATaGCTGCACGCTCCCTCTAAGCCATCTCTTCAGCTC | + |
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Preference number: 3 (lower is better) Translates to: CYMGAEMQTPVL*LHAPSKPSLQL Trigger: GAGCTGAAGAGATGGCTTAGAGGGAGCGTGCAGTCATAACACTGGTGTTTGCATCTCAGCACCCATGTAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| 3UTR TCA 72 bp | AGGCTTATGGGAACTGTTGGCTTGTTACATGGGTGCTaGGATGCAAACACCAGTGTTATGACTGCACGCTCC | + |
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Preference number: 3 (lower is better) Translates to: RLMGTVGLLHGC*DANTSVMTARS Trigger: GGAGCGTGCAGTCATAACACTGGTGTTTGCATCTCAGCACCCATGTAACAAGCCAACAGTTCCCATAAGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| 3UTR GCA 72 bp | ACATGGGTGCTGAGATGCAAACACCAGTGTTATGACTaGACGCTCCCTCTAAGCCATCTCTTCAGCTCCTTT | + |
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Preference number: 3 (lower is better) Translates to: TWVLRCKHQCYD*TLPLSHLFSSF Trigger: AAAGGAGCTGAAGAGATGGCTTAGAGGGAGCGTGCAGTCATAACACTGGTGTTTGCATCTCAGCACCCATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| 3UTR CCA 72 bp | AACATTTGCAAAACGTTTTCTTTATTGGCACCGAGGTaGGAGAAGCCAACCTCGCTCTGGCAGTCAGGAAGG | + |
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Preference number: 3 (lower is better) Translates to: NICKTFSLLAPR*EKPTSLWQSGR Trigger: CCTTCCTGACTGCCAGAGCGAGGTTGGCTTCTCCCACCTCGGTGCCAATAAAGAAAACGTTTTGCAAATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| 3UTR GCA 72 bp | CTGATGCCCTTGTCTGGGCACCAGGTATTCATGTGGTaGACACATGTGCAGGCATACACTCAACACATAAAA | + |
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Preference number: 3 (lower is better) Translates to: LMPLSGHQVFMW*THVQAYTQHIK Trigger: TTTTATGTGTTGAGTGTATGCCTGCACATGTGTGCACCACATGAATACCTGGTGCCCAGACAAGGGCATCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| 3UTR CCA 72 bp | GAAGCTGAGGCTTATGGGAACTGTTGGCTTGTTACATaGGTGCTGAGATGCAAACACCAGTGTTATGACTGC | + |
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Preference number: 3 (lower is better) Translates to: EAEAYGNCWLVT*VLRCKHQCYDC Trigger: GCAGTCATAACACTGGTGTTTGCATCTCAGCACCCATGTAACAAGCCAACAGTTCCCATAAGCCTCAGCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| 3UTR CCA 72 bp | TATACATCAGCAACATTTGCAAAACGTTTTCTTTATTaGCACCGAGGTGGGAGAAGCCAACCTCGCTCTGGC | + |
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Preference number: 3 (lower is better) Translates to: YTSATFAKRFLY*HRGGRSQPRSG Trigger: GCCAGAGCGAGGTTGGCTTCTCCCACCTCGGTGCCAATAAAGAAAACGTTTTGCAAATGTTGCTGATGTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| 3UTR CCA 72 bp | GCTCCTTTCCTCTTATCTTTTAAAAACGTGCTTATTTaGGGCTGGCGAGACAGCTCAGCAGCTGAAAGCACT | + |
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Preference number: 3 (lower is better) Translates to: APFLLSFKNVLI*GWRDSSAAEST Trigger: AGTGCTTTCAGCTGCTGAGCTGTCTCGCCAGCCCCAAATAAGCACGTTTTTAAAAGATAAGAGGAAAGGAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| 3UTR-3UTR CAA 90 bp | GATATTTTTGTTTTCCTTGCAAGCCAGTCACTACACCTGATTCTCTTGCTCTCTGGCCTGAAGAGGGTGTaGGGTTTCCTCTTGTTCTCT | + |
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Preference number: 3 (lower is better) Translates to: DIFVFLASQSLHLILLLSGLKRV*GFLLFS Trigger: AGAGAACAAGAGGAAACCCAACACCCTCTTCAGGCC...AGAGAGCAAGAGAATCAGGTGTAGTGACTGGCTTGCAAGGAAAACAAAAATATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| 3UTR-3UTR CAA 90 bp | GTGTGCACTTCAGTTAATACAATATGCTATATGGAACCTTCCCTGTATTTGGATCCTGTCTCTGGCCCTTaGAAGCTGAGGCTTATGGGA | + |
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Preference number: 3 (lower is better) Translates to: VCTSVNTICYMEPSLYLDPVSGP*KLRLMG Trigger: TCCCATAAGCCTCAGCTTCAAAGGGCCAGAGACAGG...ATCCAAATACAGGGAAGGTTCCATATAGCATATTGTATTAACTGAAGTGCACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| 3UTR TCA 72 bp | GCTATATGGAACCTTCCCTGTATTTGGATGTGGTGTTaGGATGACTGTGGTCTGAGTAATTCCAGAAGATTC | + |
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Preference number: 3 (lower is better) Translates to: AIWNLPCIWMWC*DDCGLSNSRRF Trigger: GAATCTTCTGGAATTACTCAGACCACAGTCATCTCAACACCACATCCAAATACAGGGAAGGTTCCATATAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| 3UTR TCA 72 bp | CCTGTATTTGGATGTGGTGTTGAGATGACTGTGGTCTaGGTAATTCCAGAAGATTCTCTGAAGAGTAAAAGG | + |
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Preference number: 3 (lower is better) Translates to: PVFGCGVEMTVV*VIPEDSLKSKR Trigger: CCTTTTACTCTTCAGAGAATCTTCTGGAATTACTCAGACCACAGTCATCTCAACACCACATCCAAATACAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| 3UTR-3UTR CAA 90 bp | GTGTGCACTTCAGTTAATACAATATGCTATATGGAACCTTCCCTGTATTTGGATTCTCTACCTACTCCTTaGAGTAGGGTCTCACATTTT | + |
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Preference number: 3 (lower is better) Translates to: VCTSVNTICYMEPSLYLDSLPTP*SRVSHF Trigger: AAAATGTGAGACCCTACTCAAAGGAGTAGGTAGAGA...ATCCAAATACAGGGAAGGTTCCATATAGCATATTGTATTAACTGAAGTGCACAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| 3UTR-3UTR CAA 90 bp | AGTTCAGTGCCTGTGAATGTCTTGTTAAACGAGCAGAGATCATATGTCTTGTGTATTCAGATATCTCTTTaGGTTCCGAATATAGGGTCT | + |
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Preference number: 3 (lower is better) Translates to: SSVPVNVLLNEQRSYVLCIQISL*VPNIGS Trigger: AGACCCTATATTCGGAACCAAAAGAGATATCTGAAT...ACACAAGACATATGATCTCTGCTCGTTTAACAAGACATTCACAGGCACTGAACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| 3UTR CCA 72 bp | GGAGGGGAAACATTATTCTGTGGTATAAAACATACCTaGCATTCAAGGACTATACATCAGCAACATTTGCAA | + |
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Preference number: 3 (lower is better) Translates to: GGETLFCGIKHT*HSRTIHQQHLQ Trigger: TTGCAAATGTTGCTGATGTATAGTCCTTGAATGCCAGGTATGTTTTATACCACAGAATAATGTTTCCCCTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| 3UTR TCA 72 bp | AGGTTCTTTGTAATAGCTCAGTGGCTTCACAAATTGTaGATTATTCATATAGATTTTGGGCTTCATACACGA | + |
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Preference number: 3 (lower is better) Translates to: RFFVIAQWLHKL*IIHIDFGLHTR Trigger: TCGTGTATGAAGCCCAAAATCTATATGAATAATTCACAATTTGTGAAGCCACTGAGCTATTACAAAGAACCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| CDS-3UTR CCA 90 bp | GTGGAGATCAGAGGACAGCCTGTGGGAGTCAGTTCTCTCCCTCCACCATGTGGGCAATTGCCAGCAGGATaGCCAGGGCACAGCAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: VEIRGQPVGVSSLPPPCGQLPAG*PGHSSF Trigger: AAAGCTGCTGTGCCCTGGCCATCCTGCTGGCAATTG...CCCACATGGTGGAGGGAGAGAACTGACTCCCACAGGCTGTCCTCTGATCTCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| CDS-3UTR TCA 90 bp | AGAGGACAGCCTGTGGGAGTCAGTTCTCTCCCTCCACCATGTGGGTGCACGGGTTCCTTTCTGGGATGCTaGGCTGGTGACATGAATACA | + |
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Preference number: 4 (lower is better) Translates to: RGQPVGVSSLPPPCGCTGSFLGC*AGDMNT Trigger: TGTATTCATGTCACCAGCTCAGCATCCCAGAAAGGA...ACCCGTGCACCCACATGGTGGAGGGAGAGAACTGACTCCCACAGGCTGTCCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| CDS-3UTR GCA 90 bp | AGAGGACAGCCTGTGGGAGTCAGTTCTCTCCCTCCACCATGTGGGTGCACGGGTGCTTCGTCTTTCTTGTaGCACAAAGTACAGGTGAGG | + |
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Preference number: 4 (lower is better) Translates to: RGQPVGVSSLPPPCGCTGASSFL*HKVQVR Trigger: CCTCACCTGTACTTTGTGGCACAAGAAAGACGAAGC...ACCCGTGCACCCACATGGTGGAGGGAGAGAACTGACTCCCACAGGCTGTCCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| CDS-3UTR CCA 90 bp | GAGAAGCCAACCTCGCTCTGGCAGTCAGGAAGGAGATCCAGAGGTATACCAACTAGGGCACAGCAGCTTTaGCCAGGGGCCATCAGGATT | + |
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Preference number: 4 (lower is better) Translates to: EKPTSLWQSGRRSRGIPTRAQQL*PGAIRI Trigger: AATCCTGATGGCCCCTGGCCAAAGCTGCTGTGCCCT...AGTTGGTATACCTCTGGATCTCCTTCCTGACTGCCAGAGCGAGGTTGGCTTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| CDS-3UTR CCA 90 bp | GGAGAAGCCAACCTCGCTCTGGCAGTCAGGAAGGAGATCCAGAGGTATACCAACCTGGTTTCTGGCTTCTaGCACAGCACTGGTAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: GEANLALAVRKEIQRYTNLVSGF*HSTGRS Trigger: GGACCTACCAGTGCTGTGCCAGAAGCCAGAAACCAG...GTTGGTATACCTCTGGATCTCCTTCCTGACTGCCAGAGCGAGGTTGGCTTCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| CDS-3UTR GCA 90 bp | AAGCTAGCGAGCCCCAGCAATCCTGTCTCTGGCCCTTTGAAGCTGAGGCTTATGTTGGAAGTTCACAATTaGCAGCAGGATGGCCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: KLASPSNPVSGPLKLRLMLEVHN*QQDGQG Trigger: GCCCTGGCCATCCTGCTGGCAATTGTGAACTTCCAA...CATAAGCCTCAGCTTCAAAGGGCCAGAGACAGGATTGCTGGGGCTCGCTAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| CDS-3UTR GCA 90 bp | GGAGAAGCCAACCTCGCTCTGGCAGTCAGGAAGGAGATCCAGAGGTATACCAACTTGGAAGTTCACAATTaGCAGCAGGATGGCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GEANLALAVRKEIQRYTNLEVHN*QQDGQG Trigger: GCCCTGGCCATCCTGCTGGCAATTGTGAACTTCCAA...GTTGGTATACCTCTGGATCTCCTTCCTGACTGCCAGAGCGAGGTTGGCTTCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 ENSMUST00000165991.8 |
||
| CDS-3UTR CCA 90 bp | CCAACCTCGCTCTGGCAGTCAGGAAGGAGATCCAGAGGTATACCAACTGTTCTGAGTCGCCCTCCTTTCTaGGATGCTGAGCTGGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: PTSLWQSGRRSRGIPTVLSRPPF*DAELVT Trigger: TGTCACCAGCTCAGCATCCCAGAAAGGAGGGCGACT...CAGAACAGTTGGTATACCTCTGGATCTCCTTCCTGACTGCCAGAGCGAGGTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 ENSMUST00000165991.8 |
||
| CDS-3UTR CCA 90 bp | CCAACCTCGCTCTGGCAGTCAGGAAGGAGATCCAGAGGTATACCAACTGTTCTGCTGGTTTCTGGCTTCTaGCACAGCACTGGTAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PTSLWQSGRRSRGIPTVLLVSGF*HSTGRS Trigger: GGACCTACCAGTGCTGTGCCAGAAGCCAGAAACCAG...CAGAACAGTTGGTATACCTCTGGATCTCCTTCCTGACTGCCAGAGCGAGGTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 ENSMUST00000165991.8 |
||
| CDS-3UTR TCA 90 bp | CTTATTTGGGGCTGGCGAGACAGCTCAGCAGCTGAAAGCACTTGCACAAGCCAGTACTTGCAGGAAGCCTaGACTGAGAGTGCCGTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LIWGWRDSSAAESTCTSQYLQEA*TESAVD Trigger: ATCAACGGCACTCTCAGTTCAGGCTTCCTGCAAGTA...CTGGCTTGTGCAAGTGCTTTCAGCTGCTGAGCTGTCTCGCCAGCCCCAAATAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107074.8 |
||
| CDS-3UTR GCA 90 bp | GTGGGAGAAGCCAACCTCGCTCTGGCAGTCAGGAAGGAGATCCAGAGGTATACCGCTTCGTCTTTCTTGTaGCACAAAGTACAGGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VGEANLALAVRKEIQRYTASSFL*HKVQVR Trigger: CCTCACCTGTACTTTGTGGCACAAGAAAGACGAAGC...GGTATACCTCTGGATCTCCTTCCTGACTGCCAGAGCGAGGTTGGCTTCTCCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 ENSMUST00000165991.8 |
||
| CDS-3UTR CCA 90 bp | CACCCAGTGGAGATCAGAGGACAGCCTGTGGGAGTCAGTTCTCTCCCTCCACCATGTCTTATCTCTGTGTaGTTCCCTGTGACTAGAACG | + |
|
Preference number: 4 (lower is better) Translates to: HPVEIRGQPVGVSSLPPPCLISV*FPVTRT Trigger: CGTTCTAGTCACAGGGAACCACACAGAGATAAGACA...TGGTGGAGGGAGAGAACTGACTCCCACAGGCTGTCCTCTGATCTCCACTGGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 |
||
| 3UTR CAA 72 bp | AAGCTAGCGAGCCCCAGCAATCCTGTCTCTGGCCCTTaGAAGCTGAGGCTTATGGGAACTGTTGGCTTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: KLASPSNPVSGP*KLRLMGTVGLL Trigger: TAACAAGCCAACAGTTCCCATAAGCCTCAGCTTCAAAGGGCCAGAGACAGGATTGCTGGGGCTCGCTAGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107074.8 ENSMUST00000165991.8 |
||
| CDS-3UTR TCA 90 bp | GCCAACCTCGCTCTGGCAGTCAGGAAGGAGATCCAGAGGTATACCAACTGTTCTGCTGAGCTGGTGACATaGATACATCCACCATGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ANLALAVRKEIQRYTNCSAELVT*IHPPCW Trigger: CCAACATGGTGGATGTATTCATGTCACCAGCTCAGC...AGAACAGTTGGTATACCTCTGGATCTCCTTCCTGACTGCCAGAGCGAGGTTGGC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 ENSMUST00000165991.8 |
||
| CDS-3UTR TCA 90 bp | CACCCAGTGGAGATCAGAGGACAGCCTGTGGGAGTCAGTTCTCTCCCTCCACCAATGGTGAACACCAACTaGGATGACTTTTCAGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: HPVEIRGQPVGVSSLPPPMVNTN*DDFSVM Trigger: CATCACTGAAAAGTCATCTCAGTTGGTGTTCACCAT...TGGTGGAGGGAGAGAACTGACTCCCACAGGCTGTCCTCTGATCTCCACTGGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 ENSMUST00000165991.8 |
||
| CDS-3UTR TCA 90 bp | GTGGAGATCAGAGGACAGCCTGTGGGAGTCAGTTCTCTCCCTCCACCATGTGGGATGGTGAACACCAACTaGGATGACTTTTCAGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: VEIRGQPVGVSSLPPPCGMVNTN*DDFSVM Trigger: CATCACTGAAAAGTCATCTCAGTTGGTGTTCACCAT...CCCACATGGTGGAGGGAGAGAACTGACTCCCACAGGCTGTCCTCTGATCTCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 ENSMUST00000165991.8 |
||
| CDS-3UTR GCA 90 bp | GAGAAGCCAACCTCGCTCTGGCAGTCAGGAAGGAGATCCAGAGGTATACCAACTCCCCAAGCCTTTACTTaGAGGAAGCCTGAACTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: EKPTSLWQSGRRSRGIPTPQAFT*RKPELR Trigger: TCTCAGTTCAGGCTTCCTGCAAGTAAAGGCTTGGGG...AGTTGGTATACCTCTGGATCTCCTTCCTGACTGCCAGAGCGAGGTTGGCTTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 |
||
| CDS-3UTR CCA 90 bp | TCGCTCTGGCAGTCAGGAAGGAGATCCAGAGGTATACCAACTGTTCTGCTAGATCAATTGCCAGCAGGATaGCCAGGGCACAGCAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLWQSGRRSRGIPTVLLDQLPAG*PGHSSF Trigger: AAAGCTGCTGTGCCCTGGCCATCCTGCTGGCAATTG...ATCTAGCAGAACAGTTGGTATACCTCTGGATCTCCTTCCTGACTGCCAGAGCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 ENSMUST00000165991.8 |
||
| CDS-3UTR CCA 90 bp | GCCAACCTCGCTCTGGCAGTCAGGAAGGAGATCCAGAGGTATACCAACTGTTCTAGAGTGCCGTTGATATaGCTGAAGTCAGGGTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: ANLALAVRKEIQRYTNCSRVPLI*LKSGCD Trigger: GTCACACCCTGACTTCAGCCATATCAACGGCACTCT...AGAACAGTTGGTATACCTCTGGATCTCCTTCCTGACTGCCAGAGCGAGGTTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 |
||
| CDS-3UTR TCA 90 bp | TCGCTCTGGCAGTCAGGAAGGAGATCCAGAGGTATACCAACTGTTCTGCTAGATAAGGTATATAGAGCTTaGAGGGCCACCAGGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SLWQSGRRSRGIPTVLLDKVYRA*RATRLV Trigger: CACCAGCCTGGTGGCCCTTCAAGCTCTATATACCTT...ATCTAGCAGAACAGTTGGTATACCTCTGGATCTCCTTCCTGACTGCCAGAGCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 |
||
| CDS-3UTR GCA 90 bp | TCGCTCTGGCAGTCAGGAAGGAGATCCAGAGGTATACCAACTGTTCTGCTAGATTTGGAAGTTCACAATTaGCAGCAGGATGGCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SLWQSGRRSRGIPTVLLDLEVHN*QQDGQG Trigger: GCCCTGGCCATCCTGCTGGCAATTGTGAACTTCCAA...ATCTAGCAGAACAGTTGGTATACCTCTGGATCTCCTTCCTGACTGCCAGAGCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 ENSMUST00000165991.8 |
||
| CDS-3UTR GCA 90 bp | AGTGGAGATCAGAGGACAGCCTGTGGGAGTCAGTTCTCTCCCTCCACCATGTGGTCCAAGGATTGTCTTTaGACCAGAAGAGTATTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SGDQRTACGSQFSPSTMWSKDCL*TRRVLA Trigger: GGCTAATACTCTTCTGGTGCAAAGACAATCCTTGGA...CCACATGGTGGAGGGAGAGAACTGACTCCCACAGGCTGTCCTCTGATCTCCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 ENSMUST00000165991.8 |
||
| CDS-3UTR CCA 90 bp | AACATTTGCAAAACGTTTTCTTTATTGGCACCGAGGTGGGAGAAGCCAACCTCGAGGGCACAGCAGCTTTaGCCAGGGGCCATCAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: NICKTFSLLAPRWEKPTSRAQQL*PGAIRI Trigger: AATCCTGATGGCCCCTGGCCAAAGCTGCTGTGCCCT...CGAGGTTGGCTTCTCCCACCTCGGTGCCAATAAAGAAAACGTTTTGCAAATGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 ENSMUST00000165991.8 |
||
| CDS-3UTR CCA 90 bp | GTGGAGATCAGAGGACAGCCTGTGGGAGTCAGTTCTCTCCCTCCACCATGTGGGATGAATGTAGATTTCTaGTTTCTGGCTTCTGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: VEIRGQPVGVSSLPPPCGMNVDF*FLASGT Trigger: TGTGCCAGAAGCCAGAAACCAGAAATCTACATTCAT...CCCACATGGTGGAGGGAGAGAACTGACTCCCACAGGCTGTCCTCTGATCTCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 ENSMUST00000165991.8 |
||
| CDS-3UTR TCA 90 bp | CATTTGCAAAACGTTTTCTTTATTGGCACCGAGGTGGGAGAAGCCAACCTCGCTGCTGAGCTGGTGACATaGATACATCCACCATGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: HLQNVFFIGTEVGEANLAAELVT*IHPPCW Trigger: CCAACATGGTGGATGTATTCATGTCACCAGCTCAGC...AGCGAGGTTGGCTTCTCCCACCTCGGTGCCAATAAAGAAAACGTTTTGCAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 ENSMUST00000165991.8 |
||
| CDS-3UTR TCA 90 bp | CGCCTAAGTTTGATCTCCAGACCCCATGGTAGAAGAGAGCTAACTCCCAAGAGTTCCTTTCTGGGATGCTaGGCTGGTGACATGAATACA | + |
|
Preference number: 4 (lower is better) Translates to: RLSLISRPHGRRELTPKSSFLGC*AGDMNT Trigger: TGTATTCATGTCACCAGCTCAGCATCCCAGAAAGGA...ACTCTTGGGAGTTAGCTCTCTTCTACCATGGGGTCTGGAGATCAAACTTAGGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107074.8 ENSMUST00000165991.8 |
||
| CDS-3UTR TCA 90 bp | AACATTTGCAAAACGTTTTCTTTATTGGCACCGAGGTGGGAGAAGCCAACCTCGAAGGTATATAGAGCTTaGAGGGCCACCAGGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: NICKTFSLLAPRWEKPTSKVYRA*RATRLV Trigger: CACCAGCCTGGTGGCCCTTCAAGCTCTATATACCTT...CGAGGTTGGCTTCTCCCACCTCGGTGCCAATAAAGAAAACGTTTTGCAAATGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 |
||
| CDS-3UTR GCA 90 bp | CCAACCTCGCTCTGGCAGTCAGGAAGGAGATCCAGAGGTATACCAACTGTTCTGTCCAAGGATTGTCTTTaGACCAGAAGAGTATTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PTSLWQSGRRSRGIPTVLSKDCL*TRRVLA Trigger: GGCTAATACTCTTCTGGTGCAAAGACAATCCTTGGA...CAGAACAGTTGGTATACCTCTGGATCTCCTTCCTGACTGCCAGAGCGAGGTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 ENSMUST00000165991.8 |
||
| CDS-3UTR TCA 90 bp | TCGCTCTGGCAGTCAGGAAGGAGATCCAGAGGTATACCAACTGTTCTGCTAGATGAACACCAACTGAGATaGCTTTTCAGTGATGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: SLWQSGRRSRGIPTVLLDEHQLR*LFSDAI Trigger: GATGGCATCACTGAAAAGTCATCTCAGTTGGTGTTC...ATCTAGCAGAACAGTTGGTATACCTCTGGATCTCCTTCCTGACTGCCAGAGCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 ENSMUST00000165991.8 |
||
| CDS-3UTR TCA 90 bp | AACATTTGCAAAACGTTTTCTTTATTGGCACCGAGGTGGGAGAAGCCAACCTCGTACTTGCAGGAAGCCTaGACTGAGAGTGCCGTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: NICKTFSLLAPRWEKPTSYLQEA*TESAVD Trigger: ATCAACGGCACTCTCAGTTCAGGCTTCCTGCAAGTA...CGAGGTTGGCTTCTCCCACCTCGGTGCCAATAAAGAAAACGTTTTGCAAATGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 |
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| CDS-3UTR GCA 90 bp | CAACATTTGCAAAACGTTTTCTTTATTGGCACCGAGGTGGGAGAAGCCAACCTCCCCCAAGCCTTTACTTaGAGGAAGCCTGAACTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QHLQNVFFIGTEVGEANLPQAFT*RKPELR Trigger: TCTCAGTTCAGGCTTCCTGCAAGTAAAGGCTTGGGG...GAGGTTGGCTTCTCCCACCTCGGTGCCAATAAAGAAAACGTTTTGCAAATGTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 |
||
| CDS-3UTR CCA 90 bp | GCCAACCTCGCTCTGGCAGTCAGGAAGGAGATCCAGAGGTATACCAACTGTTCTATGAATGTAGATTTCTaGTTTCTGGCTTCTGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: ANLALAVRKEIQRYTNCSMNVDF*FLASGT Trigger: TGTGCCAGAAGCCAGAAACCAGAAATCTACATTCAT...AGAACAGTTGGTATACCTCTGGATCTCCTTCCTGACTGCCAGAGCGAGGTTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 ENSMUST00000165991.8 |
||
| CDS-3UTR CCA 90 bp | TCAGCAACATTTGCAAAACGTTTTCTTTATTGGCACCGAGGTGGGAGAAGCCAAAGAGTGCCGTTGATATaGCTGAAGTCAGGGTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SATFAKRFLYWHRGGRSQRVPLI*LKSGCD Trigger: GTCACACCCTGACTTCAGCCATATCAACGGCACTCT...TTGGCTTCTCCCACCTCGGTGCCAATAAAGAAAACGTTTTGCAAATGTTGCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 |
||
| 3UTR CAA 72 bp | GGGTGTTGGGTTTCCTCTTGTTCTCTACCTACTCCTTaGAGTAGGGTCTCACATTTTTCTCCACTACACTGG | + |
|
Preference number: 4 (lower is better) Translates to: GCWVSSCSLPTP*SRVSHFSPLHW Trigger: CCAGTGTAGTGGAGAAAAATGTGAGACCCTACTCAAAGGAGTAGGTAGAGAACAAGAGGAAACCCAACACCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000107074.8 ENSMUST00000165991.8 |
||
| CDS-3UTR TCA 90 bp | TCAGCAACATTTGCAAAACGTTTTCTTTATTGGCACCGAGGTGGGAGAAGCCAAGCTGAAGTCAGGGTGTaGCCTTTGTCTCTGTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: SATFAKRFLYWHRGGRSQAEVRV*PLSLSY Trigger: ATAAGACAGAGACAAAGGTCACACCCTGACTTCAGC...TTGGCTTCTCCCACCTCGGTGCCAATAAAGAAAACGTTTTGCAAATGTTGCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 |
||
| CDS-3UTR CCA 90 bp | TTCAAGGACTATACATCAGCAACATTTGCAAAACGTTTTCTTTATTGGCACCGAAGGGCACAGCAGCTTTaGCCAGGGGCCATCAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: FKDYTSATFAKRFLYWHRRAQQL*PGAIRI Trigger: AATCCTGATGGCCCCTGGCCAAAGCTGCTGTGCCCT...TCGGTGCCAATAAAGAAAACGTTTTGCAAATGTTGCTGATGTATAGTCCTTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 ENSMUST00000165991.8 |
||
| CDS-3UTR CCA 90 bp | TTCAAGGACTATACATCAGCAACATTTGCAAAACGTTTTCTTTATTGGCACCGAAGTCGCCCTCCTTTCTaGGATGCTGAGCTGGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: FKDYTSATFAKRFLYWHRSRPPF*DAELVT Trigger: TGTCACCAGCTCAGCATCCCAGAAAGGAGGGCGACT...TCGGTGCCAATAAAGAAAACGTTTTGCAAATGTTGCTGATGTATAGTCCTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 ENSMUST00000165991.8 |
||
| CDS-3UTR CCA 90 bp | GGGGAAACATTATTCTGTGGTATAAAACATACCTGGCATTCAAGGACTATACATCTGGTTTCTGGCTTCTaGCACAGCACTGGTAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GETLFCGIKHTWHSRTIHLVSGF*HSTGRS Trigger: GGACCTACCAGTGCTGTGCCAGAAGCCAGAAACCAG...ATGTATAGTCCTTGAATGCCAGGTATGTTTTATACCACAGAATAATGTTTCCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 ENSMUST00000165991.8 |
||
| CDS-3UTR CCA 90 bp | TCAGCAACATTTGCAAAACGTTTTCTTTATTGGCACCGAGGTGGGAGAAGCCAATGTCTTATCTCTGTGTaGTTCCCTGTGACTAGAACG | + |
|
Preference number: 4 (lower is better) Translates to: SATFAKRFLYWHRGGRSQCLISV*FPVTRT Trigger: CGTTCTAGTCACAGGGAACCACACAGAGATAAGACA...TTGGCTTCTCCCACCTCGGTGCCAATAAAGAAAACGTTTTGCAAATGTTGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 |
||
| CDS-3UTR TCA 90 bp | TATACATCAGCAACATTTGCAAAACGTTTTCTTTATTGGCACCGAGGTGGGAGAGCTGAAGTCAGGGTGTaGCCTTTGTCTCTGTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: YTSATFAKRFLYWHRGGRAEVRV*PLSLSY Trigger: ATAAGACAGAGACAAAGGTCACACCCTGACTTCAGC...TCTCCCACCTCGGTGCCAATAAAGAAAACGTTTTGCAAATGTTGCTGATGTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 |
||
| CDS-3UTR CCA 90 bp | TCTCTTTTGGTTCCGAATATAGGGTCTTATTTGATTCTTAGAAAAACACTGTGGAGTCGCCCTCCTTTCTaGGATGCTGAGCTGGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: SLLVPNIGSYLILRKTLWSRPPF*DAELVT Trigger: TGTCACCAGCTCAGCATCCCAGAAAGGAGGGCGACT...CCACAGTGTTTTTCTAAGAATCAAATAAGACCCTATATTCGGAACCAAAAGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000107074.8 ENSMUST00000165991.8 |
||
| CDS-3UTR TCA 90 bp | CATTCAAGGACTATACATCAGCAACATTTGCAAAACGTTTTCTTTATTGGCACCGCTGAGCTGGTGACATaGATACATCCACCATGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: HSRTIHQQHLQNVFFIGTAELVT*IHPPCW Trigger: CCAACATGGTGGATGTATTCATGTCACCAGCTCAGC...GGTGCCAATAAAGAAAACGTTTTGCAAATGTTGCTGATGTATAGTCCTTGAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 ENSMUST00000165991.8 |
||
| CDS-3UTR TCA 90 bp | GATATTTTTGTTTTCCTTGCAAGCCAGTCACTACACCTGATTCTCTTGCTCTCTGAACACCAACTGAGATaGCTTTTCAGTGATGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: DIFVFLASQSLHLILLLSEHQLR*LFSDAI Trigger: GATGGCATCACTGAAAAGTCATCTCAGTTGGTGTTC...AGAGAGCAAGAGAATCAGGTGTAGTGACTGGCTTGCAAGGAAAACAAAAATATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000107074.8 ENSMUST00000165991.8 |
||
| CDS-3UTR GCA 90 bp | AGTTCAGTGCCTGTGAATGTCTTGTTAAACGAGCAGAGATCATATGTCTTGTGTTCCAAGGATTGTCTTTaGACCAGAAGAGTATTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSVPVNVLLNEQRSYVLCSKDCL*TRRVLA Trigger: GGCTAATACTCTTCTGGTGCAAAGACAATCCTTGGA...ACACAAGACATATGATCTCTGCTCGTTTAACAAGACATTCACAGGCACTGAACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107074.8 ENSMUST00000165991.8 |
||
| CDS-3UTR TCA 90 bp | TTCAAGGACTATACATCAGCAACATTTGCAAAACGTTTTCTTTATTGGCACCGAGAACACCAACTGAGATaGCTTTTCAGTGATGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: FKDYTSATFAKRFLYWHREHQLR*LFSDAI Trigger: GATGGCATCACTGAAAAGTCATCTCAGTTGGTGTTC...TCGGTGCCAATAAAGAAAACGTTTTGCAAATGTTGCTGATGTATAGTCCTTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 ENSMUST00000165991.8 |
||
| CDS-3UTR TCA 90 bp | CATTCAAGGACTATACATCAGCAACATTTGCAAAACGTTTTCTTTATTGGCACCAGGTATATAGAGCTGTaGCTAGAACGGAGAGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: HSRTIHQQHLQNVFFIGTRYIEL*LERRES Trigger: ACTTTCTCTCCGTTCTAGTCACAGCTCTATATACCT...GGTGCCAATAAAGAAAACGTTTTGCAAATGTTGCTGATGTATAGTCCTTGAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165991.8 |
||
| CDS-3UTR TCA 90 bp | GAAACATTATTCTGTGGTATAAAACATACCTGGCATTCAAGGACTATACATCAGATGGTGAACACCAACTaGGATGACTTTTCAGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: ETLFCGIKHTWHSRTIHQMVNTN*DDFSVM Trigger: CATCACTGAAAAGTCATCTCAGTTGGTGTTCACCAT...CTGATGTATAGTCCTTGAATGCCAGGTATGTTTTATACCACAGAATAATGTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 ENSMUST00000165991.8 |
||
| CDS-3UTR CCA 90 bp | GTGTGCACTTCAGTTAATACAATATGCTATATGGAACCTTCCCTGTATTTGGATATGAATGTAGATTTCTaGTTTCTGGCTTCTGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: VCTSVNTICYMEPSLYLDMNVDF*FLASGT Trigger: TGTGCCAGAAGCCAGAAACCAGAAATCTACATTCAT...ATCCAAATACAGGGAAGGTTCCATATAGCATATTGTATTAACTGAAGTGCACAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000107074.8 ENSMUST00000165991.8 |
||
| 3UTR CAA 72 bp | AGAGGATGTAATATAGTGGAGAAAGTTTCGGAGACTTaGGAGTCAAAATTCAGATATCTCTTTTGGTTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: RGCNIVEKVSET*ESKFRYLFWFR Trigger: TCGGAACCAAAAGAGATATCTGAATTTTGACTCCAAAGTCTCCGAAACTTTCTCCACTATATTACATCCTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| 3UTR CAA 72 bp | TTCGGAGACTTTGGAGTCAAAATTCAGATATCTCTTTaGGTTCCGAATATAGGGTCTTATTTGATTCTTAGA | + |
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Preference number: 4 (lower is better) Translates to: FGDFGVKIQISL*VPNIGSYLILR Trigger: TCTAAGAATCAAATAAGACCCTATATTCGGAACCAAAAGAGATATCTGAATTTTGACTCCAAAGTCTCCGAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| CDS-3UTR CAA 90 bp | CACCCAGTGGAGATCAGAGGACAGCCTGTGGGAGTCAGTTCTCTCCCTCCACCACAGGGCACAGCAGCTTaGGCCAGGGGCCATCAGGAT | + |
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Preference number: 5 (lower is better) Translates to: HPVEIRGQPVGVSSLPPPQGTAA*ARGHQD Trigger: ATCCTGATGGCCCCTGGCCAAAGCTGCTGTGCCCTG...TGGTGGAGGGAGAGAACTGACTCCCACAGGCTGTCCTCTGATCTCCACTGGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| CDS-3UTR CAA 90 bp | CGGCACCCAGTGGAGATCAGAGGACAGCCTGTGGGAGTCAGTTCTCTCCCTCCAGAACTGAGAGTGCCGTaGATATGGCTGAAGTCAGGG | + |
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Preference number: 5 (lower is better) Translates to: RHPVEIRGQPVGVSSLPPELRVP*IWLKSG Trigger: CCCTGACTTCAGCCATATCAACGGCACTCTCAGTTC...TGGAGGGAGAGAACTGACTCCCACAGGCTGTCCTCTGATCTCCACTGGGTGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 |
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| CDS-3UTR CAA 90 bp | AGAGTTTCCTCTGACCTCCGTGTGTGTGCAGTGCTCTCACAAATGCCTCATGCACAGGGCACAGCAGCTTaGGCCAGGGGCCATCAGGAT | + |
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Preference number: 5 (lower is better) Translates to: RVSSDLRVCAVLSQMPHAQGTAA*ARGHQD Trigger: ATCCTGATGGCCCCTGGCCAAAGCTGCTGTGCCCTG...TGCATGAGGCATTTGTGAGAGCACTGCACACACACGGAGGTCAGAGGAAACTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| CDS-3UTR CAA 90 bp | GAGGTGGGAGAAGCCAACCTCGCTCTGGCAGTCAGGAAGGAGATCCAGAGGTATCTAAGCTGTTCTAAGTaGGTCTCAGGGGAACAGTTC | + |
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Preference number: 5 (lower is better) Translates to: EVGEANLALAVRKEIQRYLSCSK*VSGEQF Trigger: GAACTGTTCCCCTGAGACCAACTTAGAACAGCTTAG...ATACCTCTGGATCTCCTTCCTGACTGCCAGAGCGAGGTTGGCTTCTCCCACCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| CDS GCA 90 bp | TCTTTGCACCAGAAGAGTATTAGCCCCTCAGCTTCGTCTTTCTTGTaGCACAAAGTACAGGTGAGGTCCAGTCGCCCTCCTTTCTGGGAT | + |
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Preference number: 5 (lower is better) Translates to: SLHQKSISPSASSFL*HKVQVRSSRPPFWD Trigger: ATCCCAGAAAGGAGGGCGACTGGACCTCACCTGTACTTTGTGGCACAAGAAAGACGAAGCTGAGGGGCTAATACTCTTCTGGTGCAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| CDS TCA 90 bp | CCACAAAGTACAGGTGAGGTCCAGTCGCCCTCCTTTCTGGGATGCTaGGCTGGTGACATGAATACATCCACCATGTTGGAAGTTCACAAT | + |
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Preference number: 5 (lower is better) Translates to: PQSTGEVQSPSFLGC*AGDMNTSTMLEVHN Trigger: ATTGTGAACTTCCAACATGGTGGATGTATTCATGTCACCAGCTCAGCATCCCAGAAAGGAGGGCGACTGGACCTCACCTGTACTTTGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| CDS-3UTR CAA 90 bp | GGAGAAGCCAACCTCGCTCTGGCAGTCAGGAAGGAGATCCAGAGGTATACCAACAATACATCCACCATGTaGGAAGTTCACAATTGCCAG | + |
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Preference number: 5 (lower is better) Translates to: GEANLALAVRKEIQRYTNNTSTM*EVHNCQ Trigger: CTGGCAATTGTGAACTTCCAACATGGTGGATGTATT...GTTGGTATACCTCTGGATCTCCTTCCTGACTGCCAGAGCGAGGTTGGCTTCTCC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| CDS CCA 90 bp | CAAGCCTTTACTTGCAGGAAGCCTGAACTGAGAGTGCCGTTGATATaGCTGAAGTCAGGGTGTGACCTTTGTCTCTGTCTTATCTCTGTG | + |
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Preference number: 5 (lower is better) Translates to: QAFTCRKPELRVPLI*LKSGCDLCLCLISV Trigger: CACAGAGATAAGACAGAGACAAAGGTCACACCCTGACTTCAGCCATATCAACGGCACTCTCAGTTCAGGCTTCCTGCAAGTAAAGGCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 |
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| CDS-3UTR CAA 90 bp | GAGAAGCCAACCTCGCTCTGGCAGTCAGGAAGGAGATCCAGAGGTATACCAACTAATACATCCACCATGTaGGAAGTTCACAATTGCCAG | + |
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Preference number: 5 (lower is better) Translates to: EKPTSLWQSGRRSRGIPTNTSTM*EVHNCQ Trigger: CTGGCAATTGTGAACTTCCAACATGGTGGATGTATT...AGTTGGTATACCTCTGGATCTCCTTCCTGACTGCCAGAGCGAGGTTGGCTTCTC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| CDS-3UTR CAA 90 bp | AACATTTGCAAAACGTTTTCTTTATTGGCACCGAGGTGGGAGAAGCCAACCTCGGAACTGAGAGTGCCGTaGATATGGCTGAAGTCAGGG | + |
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Preference number: 5 (lower is better) Translates to: NICKTFSLLAPRWEKPTSELRVP*IWLKSG Trigger: CCCTGACTTCAGCCATATCAACGGCACTCTCAGTTC...CGAGGTTGGCTTCTCCCACCTCGGTGCCAATAAAGAAAACGTTTTGCAAATGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 |
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| CDS-3UTR CAA 90 bp | GTGTGCACTTCAGTTAATACAATATGCTATATGGAACCTTCCCTGTATTTGGATCAGGGCACAGCAGCTTaGGCCAGGGGCCATCAGGAT | + |
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Preference number: 5 (lower is better) Translates to: VCTSVNTICYMEPSLYLDQGTAA*ARGHQD Trigger: ATCCTGATGGCCCCTGGCCAAAGCTGCTGTGCCCTG...ATCCAAATACAGGGAAGGTTCCATATAGCATATTGTATTAACTGAAGTGCACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| CDS TCA 90 bp | CAGGGTGTGACCTTTGTCTCTGTCTTATCTCTGTGTGGTTCCCTGTaGCTAGAACGGAGAGAAAGTGGCCATGAATGTAGATTTCTGGTT | + |
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Preference number: 5 (lower is better) Translates to: QGVTFVSVLSLCGSL*LERRESGHECRFLV Trigger: AACCAGAAATCTACATTCATGGCCACTTTCTCTCCGTTCTAGTCACAGGGAACCACACAGAGATAAGACAGAGACAAAGGTCACACCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 |
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| CDS-3UTR CAA 90 bp | GGGGAAACATTATTCTGTGGTATAAAACATACCTGGCATTCAAGGACTATACATCTAAGCTGTTCTAAGTaGGTCTCAGGGGAACAGTTC | + |
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Preference number: 5 (lower is better) Translates to: GETLFCGIKHTWHSRTIHLSCSK*VSGEQF Trigger: GAACTGTTCCCCTGAGACCAACTTAGAACAGCTTAG...ATGTATAGTCCTTGAATGCCAGGTATGTTTTATACCACAGAATAATGTTTCCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| CDS-3UTR CAA 90 bp | TCTCTTTTGGTTCCGAATATAGGGTCTTATTTGATTCTTAGAAAAACACTGTGGCTAAGCTGTTCTAAGTaGGTCTCAGGGGAACAGTTC | + |
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Preference number: 5 (lower is better) Translates to: SLLVPNIGSYLILRKTLWLSCSK*VSGEQF Trigger: GAACTGTTCCCCTGAGACCAACTTAGAACAGCTTAG...CCACAGTGTTTTTCTAAGAATCAAATAAGACCCTATATTCGGAACCAAAAGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| CDS TCA 72 bp | CCTCAGCTTCGTCTTTCTTGTGCCACAAAGTACAGGTaGGGTCCAGTCGCCCTCCTTTCTGGGATGCTGAGC | + |
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Preference number: 6 (lower is better) Translates to: PQLRLSCATKYR*GPVALLSGMLS Trigger: GCTCAGCATCCCAGAAAGGAGGGCGACTGGACCTCACCTGTACTTTGTGGCACAAGAAAGACGAAGCTGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| CDS GCA 72 bp | ACCAGGCTGGTGACCAACATCCCCCAAGCCTTTACTTaGAGGAAGCCTGAACTGAGAGTGCCGTTGATATGG | + |
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Preference number: 6 (lower is better) Translates to: TRLVTNIPQAFT*RKPELRVPLIW Trigger: CCATATCAACGGCACTCTCAGTTCAGGCTTCCTGCAAGTAAAGGCTTGGGGGATGTTGGTCACCAGCCTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 |
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| CDS TCA 72 bp | ACAGGTGAGGTCCAGTCGCCCTCCTTTCTGGGATGCTaGGCTGGTGACATGAATACATCCACCATGTTGGAA | + |
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Preference number: 6 (lower is better) Translates to: TGEVQSPSFLGC*AGDMNTSTMLE Trigger: TTCCAACATGGTGGATGTATTCATGTCACCAGCTCAGCATCCCAGAAAGGAGGGCGACTGGACCTCACCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| CDS TCA 72 bp | GACCAACATCCCCCAAGCCTTTACTTGCAGGAAGCCTaGACTGAGAGTGCCGTTGATATGGCTGAAGTCAGG | + |
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Preference number: 6 (lower is better) Translates to: DQHPPSLYLQEA*TESAVDMAEVR Trigger: CCTGACTTCAGCCATATCAACGGCACTCTCAGTTCAGGCTTCCTGCAAGTAAAGGCTTGGGGGATGTTGGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 |
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| CDS TCA 72 bp | ACAAGGTATATAGAGCTTGAAGGGCCACCAGGCTGGTaGCCAACATCCCCCAAGCCTTTACTTGCAGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: TRYIELEGPPGW*PTSPKPLLAGS Trigger: GCTTCCTGCAAGTAAAGGCTTGGGGGATGTTGGTCACCAGCCTGGTGGCCCTTCAAGCTCTATATACCTTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 |
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| CDS CAA 72 bp | CACCAGAAGAGTATTAGCCCCTCAGCTTCGTCTTTCTaGTGCCACAAAGTACAGGTGAGGTCCAGTCGCCCT | + |
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Preference number: 6 (lower is better) Translates to: HQKSISPSASSF*CHKVQVRSSRP Trigger: AGGGCGACTGGACCTCACCTGTACTTTGTGGCACAAGAAAGACGAAGCTGAGGGGCTAATACTCTTCTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| CDS CCA 72 bp | AGTGGCCATGAATGTAGATTTCTGGTTTCTGGCTTCTaGCACAGCACTGGTAGGTCCCACTGTCTGATGGTG | + |
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Preference number: 6 (lower is better) Translates to: SGHECRFLVSGF*HSTGRSHCLMV Trigger: CACCATCAGACAGTGGGACCTACCAGTGCTGTGCCAGAAGCCAGAAACCAGAAATCTACATTCATGGCCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| CDS CAA 72 bp | GCCTTTACTTGCAGGAAGCCTGAACTGAGAGTGCCGTaGATATGGCTGAAGTCAGGGTGTGACCTTTGTCTC | + |
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Preference number: 6 (lower is better) Translates to: AFTCRKPELRVP*IWLKSGCDLCL Trigger: GAGACAAAGGTCACACCCTGACTTCAGCCATATCAACGGCACTCTCAGTTCAGGCTTCCTGCAAGTAAAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 |
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| CDS CAA 90 bp | ATCCCCCAAGCCTTTACTTGCAGGAAGCCTGAACTGAGAGTGCCGTaGATATGGCTGAAGTCAGGGTGTGACCTTTGTCTCTGTCTTATC | + |
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Preference number: 6 (lower is better) Translates to: IPQAFTCRKPELRVP*IWLKSGCDLCLCLI Trigger: GATAAGACAGAGACAAAGGTCACACCCTGACTTCAGCCATATCAACGGCACTCTCAGTTCAGGCTTCCTGCAAGTAAAGGCTTGGGGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 |
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| CDS CCA 72 bp | TCAGGGTGTGACCTTTGTCTCTGTCTTATCTCTGTGTaGTTCCCTGTGACTAGAACGGAGAGAAAGTGGCCA | + |
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Preference number: 6 (lower is better) Translates to: SGCDLCLCLISV*FPVTRTERKWP Trigger: TGGCCACTTTCTCTCCGTTCTAGTCACAGGGAACCACACAGAGATAAGACAGAGACAAAGGTCACACCCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 |
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| CDS CCA 72 bp | ACTTGCAGGAAGCCTGAACTGAGAGTGCCGTTGATATaGCTGAAGTCAGGGTGTGACCTTTGTCTCTGTCTT | + |
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Preference number: 6 (lower is better) Translates to: TCRKPELRVPLI*LKSGCDLCLCL Trigger: AAGACAGAGACAAAGGTCACACCCTGACTTCAGCCATATCAACGGCACTCTCAGTTCAGGCTTCCTGCAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 |
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| CDS CAA 90 bp | ATGCCATCTGTCTCAGGATCCCTTTTAACCCTAAGCTGTTCTAAGTaGGTCTCAGGGGAACAGTTCCAAGGATTGTCTTTGCACCAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: MPSVSGSLLTLSCSK*VSGEQFQGLSLHQK Trigger: CTTCTGGTGCAAAGACAATCCTTGGAACTGTTCCCCTGAGACCAACTTAGAACAGCTTAGGGTTAAAAGGGATCCTGAGACAGATGGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 ENSMUST00000165991.8 |
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| CDS CAA 72 bp | GTCTCAGGATCCCTTTTAACCCTAAGCTGTTCTAAGTaGGTCTCAGGGGAACAGTTCCAAGGATTGTCTTTG | + |
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Preference number: 6 (lower is better) Translates to: VSGSLLTLSCSK*VSGEQFQGLSL Trigger: CAAAGACAATCCTTGGAACTGTTCCCCTGAGACCAACTTAGAACAGCTTAGGGTTAAAAGGGATCCTGAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047702.8 ENSMUST00000107074.8 ENSMUST00000165991.8 |
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