Pregenerated sensors for CD14 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051439Ensembl transcript IDs: ENSMUST00000061829.8
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | TTTGTGAGCACAGATGGACAACTTTCAGGAGTGAGTTTTCCCCTTCCGTGTGGACTGAACCATCTTGACTaGCTTTCTTTCCTTACATCG | + |
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Preference number: 2 (lower is better) Translates to: FVSTDGQLSGVSFPLPCGLNHLD*LSFLTS Trigger: CGATGTAAGGAAAGAAAGGCAGTCAAGATGGTTCAG...TCCACACGGAAGGGGAAAACTCACTCCTGAAAGTTGTCCATCTGTGCTCACAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| 3UTR-3UTR GCA 90 bp | TTATTTGTGAGCACAGATGGACAACTTTCAGGAGTGAGTTTTCCCCTTCCGTGTATCAGGGGTCAAGTTTaGTGGCTTTTACCCACTGAA | + |
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Preference number: 2 (lower is better) Translates to: LFVSTDGQLSGVSFPLPCIRGQV*WLLPTE Trigger: TTCAGTGGGTAAAAGCCAGCAAACTTGACCCCTGAT...ACACGGAAGGGGAAAACTCACTCCTGAAAGTTGTCCATCTGTGCTCACAAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| 3UTR GCA 72 bp | AAGTTTGCTGGCTTTTACCCACTGAACCATCTTGACTaGCTTTCTTTCCTTACATCGTGGATTAAGATTTTA | + |
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Preference number: 3 (lower is better) Translates to: KFAGFYPLNHLD*LSFLTSWIKIL Trigger: TAAAATCTTAATCCACGATGTAAGGAAAGAAAGGCAGTCAAGATGGTTCAGTGGGTAAAAGCCAGCAAACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS-3UTR TCA 90 bp | ATTTGTGAGCACAGATGGACAACTTTCAGGAGTGAGTTTTCCCCTTCCGTGTGGGGAGGGTCGGGAACTTaGGGGGACAGAGGGCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: ICEHRWTTFRSEFSPSVWGGSGT*GDRGLR Trigger: TCTCAGCCCTCTGTCCCCTCAAGTTCCCGACCCTCC...CCACACGGAAGGGGAAAACTCACTCCTGAAAGTTGTCCATCTGTGCTCACAAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS-3UTR GCA 90 bp | TTTGTGAGCACAGATGGACAACTTTCAGGAGTGAGTTTTCCCCTTCCGTGTGGAGGGGCGGGAGAGGCGTaGACCAGAAGCAACAGCAAC | + |
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Preference number: 4 (lower is better) Translates to: FVSTDGQLSGVSFPLPCGGAGEA*TRSNSN Trigger: GTTGCTGTTGCTTCTGGTGCACGCCTCTCCCGCCCC...TCCACACGGAAGGGGAAAACTCACTCCTGAAAGTTGTCCATCTGTGCTCACAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS-3UTR CCA 90 bp | TTATTTGTGAGCACAGATGGACAACTTTCAGGAGTGAGTTTTCCCCTTCCGTGTGGCTTCCAGAAGCGGTaGCGGCGCGGTGCCGGTTAC | + |
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Preference number: 4 (lower is better) Translates to: LFVSTDGQLSGVSFPLPCGFQKR*RRGAGY Trigger: GTAACCGGCACCGCGCCGCCACCGCTTCTGGAAGCC...ACACGGAAGGGGAAAACTCACTCCTGAAAGTTGTCCATCTGTGCTCACAAATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS-3UTR TCA 90 bp | TATTTATTTGTGAGCACAGATGGACAACTTTCAGGAGTGAGTTTTCCCCTTCCGGGCCACTGCTTGGGATaGTGGAGCTCCGGCGGTGAC | + |
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Preference number: 4 (lower is better) Translates to: YLFVSTDGQLSGVSFPLPGHCLG*WSSGGD Trigger: GTCACCGCCGGAGCTCCATCATCCCAAGCAGTGGCC...CGGAAGGGGAAAACTCACTCCTGAAAGTTGTCCATCTGTGCTCACAAATAAATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS-3UTR TCA 90 bp | AGATGGACAACTTTCAGGAGTGAGTTTTCCCCTTCCGTGTGGATCCTGAGGGTTCAAAGCCAGAGTTCCTaGCAAGGCCACTGCTTGGGA | + |
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Preference number: 4 (lower is better) Translates to: RWTTFRSEFSPSVWILRVQSQSS*QGHCLG Trigger: TCCCAAGCAGTGGCCTTGTCAGGAACTCTGGCTTTG...AACCCTCAGGATCCACACGGAAGGGGAAAACTCACTCCTGAAAGTTGTCCATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS-3UTR GCA 90 bp | TTTGTGAGCACAGATGGACAACTTTCAGGAGTGAGTTTTCCCCTTCCGTGTGGAGGCTTTAGCCACTGCTaGAGTTCTGCGAGCCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: FVSTDGQLSGVSFPLPCGGFSHC*SSASQA Trigger: TGCCTGGCTCGCAGAACTGCAGCAGTGGCTAAAGCC...TCCACACGGAAGGGGAAAACTCACTCCTGAAAGTTGTCCATCTGTGCTCACAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS-3UTR CCA 90 bp | TTTGTGAGCACAGATGGACAACTTTCAGGAGTGAGTTTTCCCCTTCCGTGTGGAGACAGGTTCCCCACTTaGGGCAGCTCATCTGGGCTA | + |
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Preference number: 4 (lower is better) Translates to: FVSTDGQLSGVSFPLPCGDRFPT*GSSSGL Trigger: TAGCCCAGATGAGCTGCCCCAAGTGGGGAACCTGTC...TCCACACGGAAGGGGAAAACTCACTCCTGAAAGTTGTCCATCTGTGCTCACAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS-3UTR TCA 90 bp | TATTTATTTGTGAGCACAGATGGACAACTTTCAGGAGTGAGTTTTCCCCTTCCGGAGGGGACAGAGGGCTaGGATCAGTCCTCTCTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: YLFVSTDGQLSGVSFPLPEGTEG*DQSSLA Trigger: GGCGAGAGAGGACTGATCTCAGCCCTCTGTCCCCTC...CGGAAGGGGAAAACTCACTCCTGAAAGTTGTCCATCTGTGCTCACAAATAAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS-3UTR CCA 90 bp | AGATGGACAACTTTCAGGAGTGAGTTTTCCCCTTCCGTGTGGATCCTGAGGGTTTTGAGCGAGTGTGCTTaGGCAATACTCAGTACCTTG | + |
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Preference number: 4 (lower is better) Translates to: RWTTFRSEFSPSVWILRVLSECA*AILSTL Trigger: CAAGGTACTGAGTATTGCCCAAGCACACTCGCTCAA...AACCCTCAGGATCCACACGGAAGGGGAAAACTCACTCCTGAAAGTTGTCCATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS-3UTR TCA 90 bp | ATTTGTGAGCACAGATGGACAACTTTCAGGAGTGAGTTTTCCCCTTCCGTGTGGATCTGGCTTCGGATCTaGGAAGTTGCAGGAACAACT | + |
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Preference number: 4 (lower is better) Translates to: ICEHRWTTFRSEFSPSVWIWLRI*EVAGTT Trigger: AGTTGTTCCTGCAACTTCTCAGATCCGAAGCCAGAT...CCACACGGAAGGGGAAAACTCACTCCTGAAAGTTGTCCATCTGTGCTCACAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS-3UTR CCA 90 bp | GATTTTAATAAATTTAAAGCAGAGGATTCGTTGACGAGGACCCTCAGAAACCAGCACGCTGAGCTTGGCTaGCAGCCCTTTAGGTACCTG | + |
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Preference number: 4 (lower is better) Translates to: DFNKFKAEDSLTRTLRNQHAELG*QPFRYL Trigger: CAGGTACCTAAAGGGCTGCCAGCCAAGCTCAGCGTG...CTGGTTTCTGAGGGTCCTCGTCAACGAATCCTCTGCTTTAAATTTATTAAAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS-3UTR TCA 90 bp | TATTTATTTGTGAGCACAGATGGACAACTTTCAGGAGTGAGTTTTCCCCTTCCGCAATACTCAGTACCTTaGGTCCAGGCTTTAGCCACT | + |
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Preference number: 4 (lower is better) Translates to: YLFVSTDGQLSGVSFPLPQYSVP*VQALAT Trigger: AGTGGCTAAAGCCTGGACTCAAGGTACTGAGTATTG...CGGAAGGGGAAAACTCACTCCTGAAAGTTGTCCATCTGTGCTCACAAATAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS-3UTR TCA 90 bp | GATTTTAATAAATTTAAAGCAGAGGATTCGTTGACGAGGACCCTCAGAAACCAGGGGATTTCCTTTAAGTaGCAGGTTCCCCACTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: DFNKFKAEDSLTRTLRNQGISFK*QVPHLG Trigger: CCCCAAGTGGGGAACCTGTCACTTAAAGGAAATCCC...CTGGTTTCTGAGGGTCCTCGTCAACGAATCCTCTGCTTTAAATTTATTAAAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS-3UTR GCA 90 bp | TATTTATTTGTGAGCACAGATGGACAACTTTCAGGAGTGAGTTTTCCCCTTCCGTCGGATCTGAGAAGTTaGAGGAACAACTTTCCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: YLFVSTDGQLSGVSFPLPSDLRS*RNNFPR Trigger: ACGAGGAAAGTTGTTCCTGCAACTTCTCAGATCCGA...CGGAAGGGGAAAACTCACTCCTGAAAGTTGTCCATCTGTGCTCACAAATAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS CCA 90 bp | CTTGCAGCTGTACCCTTGCTGCGGCCAGCGCAGAGCACACGCCGCTaGGCGTCTCCATCCCCGCGTTACGCAGCGCTAAAACTTGGAGGG | + |
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Preference number: 5 (lower is better) Translates to: LAAVPLLRPAQSTRR*ASPSPRYAALKLGG Trigger: CCCTCCAAGTTTTAGCGCTGCGTAACGCGGGGATGGAGACGCCCAGCGGCGTGTGCTCTGCGCTGGCCGCAGCAAGGGTACAGCTGCAAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS TCA 90 bp | AGGCATCCCTTGTTGCCCACGACACGTTGCGGAGGTTCAAGATGTTaGGATCGGGTCCGGTGGCTTCCAGAAGCGGTGGCGGCGCGGTGC | + |
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Preference number: 5 (lower is better) Translates to: RHPLLPTTRCGGSRC*DRVRWLPEAVAARC Trigger: GCACCGCGCCGCCACCGCTTCTGGAAGCCACCGGACCCGATCTCAACATCTTGAACCTCCGCAACGTGTCGTGGGCAACAAGGGATGCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS CCA 90 bp | GGCGGCGCGGTGCCGGTTACCTCGAGATTTTCAAGAGTCAGTTCCTaGAGGCCGGAAATCCCGAGCACACGCAGGGCTCCGAATAGAATC | + |
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Preference number: 5 (lower is better) Translates to: GGAVPVTSRFSRVSS*RPEIPSTRRAPNRI Trigger: GATTCTATTCGGAGCCCTGCGTGTGCTCGGGATTTCCGGCCTCCAGGAACTGACTCTTGAAAATCTCGAGGTAACCGGCACCGCGCCGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS TCA 90 bp | GGTACCTGCTTCAGCCCAGTGAAAGACAGATTGAGCGAGTTTAGCTaGCTGGGCCAGTCACAACTCGGAGCGCCTGCAGCATCCCGCAGT | + |
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Preference number: 5 (lower is better) Translates to: GTCFSPVKDRLSEFS*LGQSQLGAPAASRS Trigger: ACTGCGGGATGCTGCAGGCGCTCCGAGTTGTGACTGGCCCAGTCAGCTAAACTCGCTCAATCTGTCTTTCACTGGGCTGAAGCAGGTACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS CCA 90 bp | GAGGTTCAAGATGTTGAGATCGGGTCCGGTGGCTTCCAGAAGCGGTaGCGGCGCGGTGCCGGTTACCTCGAGATTTTCAAGAGTCAGTTC | + |
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Preference number: 5 (lower is better) Translates to: EVQDVEIGSGGFQKR*RRGAGYLEIFKSQF Trigger: GAACTGACTCTTGAAAATCTCGAGGTAACCGGCACCGCGCCGCCACCGCTTCTGGAAGCCACCGGACCCGATCTCAACATCTTGAACCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS GCA 90 bp | GCTTGGGCAATACTCAGTACCTTGAGTCCAGGCTTTAGCCACTGCTaGAGTTCTGCGAGCCAGGCATCCCTTGTTGCCCACGACACGTTG | + |
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Preference number: 5 (lower is better) Translates to: AWAILSTLSPGFSHC*SSASQASLVAHDTL Trigger: CAACGTGTCGTGGGCAACAAGGGATGCCTGGCTCGCAGAACTGCAGCAGTGGCTAAAGCCTGGACTCAAGGTACTGAGTATTGCCCAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS GCA 90 bp | TGTGCTTGGGCAATACTCAGTACCTTGAGTCCAGGCTTTAGCCACTaGTGCAGTTCTGCGAGCCAGGCATCCCTTGTTGCCCACGACACG | + |
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Preference number: 5 (lower is better) Translates to: CAWAILSTLSPGFSH*CSSASQASLVAHDT Trigger: CGTGTCGTGGGCAACAAGGGATGCCTGGCTCGCAGAACTGCAGCAGTGGCTAAAGCCTGGACTCAAGGTACTGAGTATTGCCCAAGCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS-3UTR CAA 90 bp | GTGAGCACAGATGGACAACTTTCAGGAGTGAGTTTTCCCCTTCCGTGTGGATCCGCCAGGCATCCCTTGTaGCCCACGACACGTTGCGGA | + |
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Preference number: 5 (lower is better) Translates to: VSTDGQLSGVSFPLPCGSARHPL*PTTRCG Trigger: TCCGCAACGTGTCGTGGGCAACAAGGGATGCCTGGC...GGATCCACACGGAAGGGGAAAACTCACTCCTGAAAGTTGTCCATCTGTGCTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS CCA 90 bp | GGGAAGACGCGGACCTGTTCGCAGGAAAAGTTGAGCGAGTGTGCTTaGGCAATACTCAGTACCTTGAGTCCAGGCTTTAGCCACTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: GKTRTCSQEKLSECA*AILSTLSPGFSHCC Trigger: GCAGCAGTGGCTAAAGCCTGGACTCAAGGTACTGAGTATTGCCCAAGCACACTCGCTCAACTTTTCCTGCGAACAGGTCCGCGTCTTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS CCA 90 bp | CCTATCCAGCCTGTTGTAACTGAGATCCAGCACGCTGAGCTTGGCTaGCAGCCCTTTAGGTACCTGCTTCAGCCCAGTGAAAGACAGATT | + |
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Preference number: 5 (lower is better) Translates to: PIQPVVTEIQHAELG*QPFRYLLQPSERQI Trigger: AATCTGTCTTTCACTGGGCTGAAGCAGGTACCTAAAGGGCTGCCAGCCAAGCTCAGCGTGCTGGATCTCAGTTACAACAGGCTGGATAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS-3UTR CAA 90 bp | TATTTATTTGTGAGCACAGATGGACAACTTTCAGGAGTGAGTTTTCCCCTTCCGCTTGCAGCTGTACCCTaGCTGCGGCCAGCGCAGAGC | + |
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Preference number: 5 (lower is better) Translates to: YLFVSTDGQLSGVSFPLPLAAVP*LRPAQS Trigger: GCTCTGCGCTGGCCGCAGCAAGGGTACAGCTGCAAG...CGGAAGGGGAAAACTCACTCCTGAAAGTTGTCCATCTGTGCTCACAAATAAATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS-3UTR CAA 90 bp | GTGAGCACAGATGGACAACTTTCAGGAGTGAGTTTTCCCCTTCCGTGTGGATCCTCGCCCAATTCAGGATaGTCAGACAGGTCTAAGGTG | + |
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Preference number: 5 (lower is better) Translates to: VSTDGQLSGVSFPLPCGSSPNSG*SDRSKV Trigger: CACCTTAGACCTGTCTGACAATCCTGAATTGGGCGA...GGATCCACACGGAAGGGGAAAACTCACTCCTGAAAGTTGTCCATCTGTGCTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS-3UTR CAA 90 bp | AGATGGACAACTTTCAGGAGTGAGTTTTCCCCTTCCGTGTGGATCCTGAGGGTTGCAATACTCAGTACCTaGAGTCCAGGCTTTAGCCAC | + |
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Preference number: 5 (lower is better) Translates to: RWTTFRSEFSPSVWILRVAILST*SPGFSH Trigger: GTGGCTAAAGCCTGGACTCAAGGTACTGAGTATTGC...AACCCTCAGGATCCACACGGAAGGGGAAAACTCACTCCTGAAAGTTGTCCATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS-3UTR CAA 90 bp | TATTTATTTGTGAGCACAGATGGACAACTTTCAGGAGTGAGTTTTCCCCTTCCGCGGAGGTTCAAGATGTaGAGATCGGGTCCGGTGGCT | + |
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Preference number: 5 (lower is better) Translates to: YLFVSTDGQLSGVSFPLPRRFKM*RSGPVA Trigger: AGCCACCGGACCCGATCTCAACATCTTGAACCTCCG...CGGAAGGGGAAAACTCACTCCTGAAAGTTGTCCATCTGTGCTCACAAATAAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS GCA 90 bp | ACCGTAAGCCGCTTTAAGGACAGAGACTTGATAATATCAGTGAACTaGCCCAGATCTGCTTCCGTGTCCACACGCTTTAGAAGGTATTCC | + |
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Preference number: 5 (lower is better) Translates to: TVSRFKDRDLIISVN*PRSASVSTRFRRYS Trigger: GGAATACCTTCTAAAGCGTGTGGACACGGAAGCAGATCTGGGGCAGTTCACTGATATTATCAAGTCTCTGTCCTTAAAGCGGCTTACGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS-3UTR CAA 90 bp | ATTTGTGAGCACAGATGGACAACTTTCAGGAGTGAGTTTTCCCCTTCCGTGTGGTTCGGATCTGAGAAGTaGCAGGAACAACTTTCCTCG | + |
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Preference number: 5 (lower is better) Translates to: ICEHRWTTFRSEFSPSVWFGSEK*QEQLSS Trigger: CGAGGAAAGTTGTTCCTGCAACTTCTCAGATCCGAA...CCACACGGAAGGGGAAAACTCACTCCTGAAAGTTGTCCATCTGTGCTCACAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS-3UTR CAA 90 bp | TATTTATTTGTGAGCACAGATGGACAACTTTCAGGAGTGAGTTTTCCCCTTCCGTGTTCGCAGGAAAAGTaGAGCGAGTGTGCTTGGGCA | + |
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Preference number: 5 (lower is better) Translates to: YLFVSTDGQLSGVSFPLPCSQEK*SECAWA Trigger: TGCCCAAGCACACTCGCTCAACTTTTCCTGCGAACA...CGGAAGGGGAAAACTCACTCCTGAAAGTTGTCCATCTGTGCTCACAAATAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS-3UTR CAA 90 bp | TATTTATTTGTGAGCACAGATGGACAACTTTCAGGAGTGAGTTTTCCCCTTCCGGTTGAGCGAGTGTGCTaGGGCAATACTCAGTACCTT | + |
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Preference number: 5 (lower is better) Translates to: YLFVSTDGQLSGVSFPLPVERVC*GNTQYL Trigger: AAGGTACTGAGTATTGCCCAAGCACACTCGCTCAAC...CGGAAGGGGAAAACTCACTCCTGAAAGTTGTCCATCTGTGCTCACAAATAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS-3UTR CAA 90 bp | AGATGGACAACTTTCAGGAGTGAGTTTTCCCCTTCCGTGTGGATCCTGAGGGTTTTTAAGGACAGAGACTaGATAATATCAGTGAACTGC | + |
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Preference number: 5 (lower is better) Translates to: RWTTFRSEFSPSVWILRVFKDRD*IISVNC Trigger: GCAGTTCACTGATATTATCAAGTCTCTGTCCTTAAA...AACCCTCAGGATCCACACGGAAGGGGAAAACTCACTCCTGAAAGTTGTCCATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS GCA 72 bp | TCTAGCTCGCAGGGCTCTGGTGGGGCGGGAGAGGCGTaGACCAGAAGCAACAGCAACAAGCCAAGCACACGC | + |
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Preference number: 6 (lower is better) Translates to: SSSQGSGGAGEA*TRSNSNKPSTR Trigger: GCGTGTGCTTGGCTTGTTGCTGTTGCTTCTGGTGCACGCCTCTCCCGCCCCACCAGAGCCCTGCGAGCTAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS CAA 90 bp | CAGGCATCCCTTGTTGCCCACGACACGTTGCGGAGGTTCAAGATGTaGAGATCGGGTCCGGTGGCTTCCAGAAGCGGTGGCGGCGCGGTG | + |
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Preference number: 6 (lower is better) Translates to: QASLVAHDTLRRFKM*RSGPVASRSGGGAV Trigger: CACCGCGCCGCCACCGCTTCTGGAAGCCACCGGACCCGATCTCAACATCTTGAACCTCCGCAACGTGTCGTGGGCAACAAGGGATGCCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS GCA 72 bp | CGGGTCCGGTGGCTTCCAGAAGCGGTGGCGGCGCGGTaGCGGTTACCTCGAGATTTTCAAGAGTCAGTTCCT | + |
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Preference number: 6 (lower is better) Translates to: RVRWLPEAVAAR*RLPRDFQESVP Trigger: AGGAACTGACTCTTGAAAATCTCGAGGTAACCGGCACCGCGCCGCCACCGCTTCTGGAAGCCACCGGACCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS GCA 72 bp | CTTCCGTGTCCACACGCTTTAGAAGGTATTCCAGGCTaGGGCCGCCGCCGTACAATTCCACATCTGCCGCCC | + |
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Preference number: 6 (lower is better) Translates to: LPCPHALEGIPG*GRRRTIPHLPP Trigger: GGGCGGCAGATGTGGAATTGTACGGCGGCGGCCGCAGCCTGGAATACCTTCTAAAGCGTGTGGACACGGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS TCA 72 bp | TTGTTGCCCACGACACGTTGCGGAGGTTCAAGATGTTaGGATCGGGTCCGGTGGCTTCCAGAAGCGGTGGCG | + |
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Preference number: 6 (lower is better) Translates to: LLPTTRCGGSRC*DRVRWLPEAVA Trigger: CGCCACCGCTTCTGGAAGCCACCGGACCCGATCTCAACATCTTGAACCTCCGCAACGTGTCGTGGGCAACAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS CCA 72 bp | GTGCCGGTTACCTCGAGATTTTCAAGAGTCAGTTCCTaGAGGCCGGAAATCCCGAGCACACGCAGGGCTCCG | + |
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Preference number: 6 (lower is better) Translates to: VPVTSRFSRVSS*RPEIPSTRRAP Trigger: CGGAGCCCTGCGTGTGCTCGGGATTTCCGGCCTCCAGGAACTGACTCTTGAAAATCTCGAGGTAACCGGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS CCA 72 bp | AGGAGCAAAGCCAGAGTTCCTGACAAGGCCACTGCTTaGGATGATGGAGCTCCGGCGGTGACTACGCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: RSKARVPDKATA*DDGAPAVTTPE Trigger: CTCTGGCGTAGTCACCGCCGGAGCTCCATCATCCCAAGCAGTGGCCTTGTCAGGAACTCTGGCTTTGCTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS CAA 72 bp | CTTGTTGCCCACGACACGTTGCGGAGGTTCAAGATGTaGAGATCGGGTCCGGTGGCTTCCAGAAGCGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: LVAHDTLRRFKM*RSGPVASRSGG Trigger: GCCACCGCTTCTGGAAGCCACCGGACCCGATCTCAACATCTTGAACCTCCGCAACGTGTCGTGGGCAACAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS CAA 72 bp | TCTGCGAGCCAGGCATCCCTTGTTGCCCACGACACGTaGCGGAGGTTCAAGATGTTGAGATCGGGTCCGGTG | + |
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Preference number: 6 (lower is better) Translates to: SASQASLVAHDT*RRFKMLRSGPV Trigger: CACCGGACCCGATCTCAACATCTTGAACCTCCGCAACGTGTCGTGGGCAACAAGGGATGCCTGGCTCGCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS CAA 90 bp | TGCTGCAGTTCTGCGAGCCAGGCATCCCTTGTTGCCCACGACACGTaGCGGAGGTTCAAGATGTTGAGATCGGGTCCGGTGGCTTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: CCSSASQASLVAHDT*RRFKMLRSGPVASR Trigger: TCTGGAAGCCACCGGACCCGATCTCAACATCTTGAACCTCCGCAACGTGTCGTGGGCAACAAGGGATGCCTGGCTCGCAGAACTGCAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS CAA 90 bp | CTGCGGCCGCCGCCGTACAATTCCACATCTGCCGCCCCCAAACAATaGAAAGCGCTGGACCAATCTGGCTTCGGATCTGAGAAGTTGCAG | + |
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Preference number: 6 (lower is better) Translates to: LRPPPYNSTSAAPKQ*KALDQSGFGSEKLQ Trigger: CTGCAACTTCTCAGATCCGAAGCCAGATTGGTCCAGCGCTTTCAATTGTTTGGGGGCGGCAGATGTGGAATTGTACGGCGGCGGCCGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS TCA 72 bp | CGTTACGCAGCGCTAAAACTTGGAGGGTCGGGAACTTaGGGGGACAGAGGGCTGAGATCAGTCCTCTCTCGC | + |
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Preference number: 6 (lower is better) Translates to: RYAALKLGGSGT*GDRGLRSVLSR Trigger: GCGAGAGAGGACTGATCTCAGCCCTCTGTCCCCTCAAGTTCCCGACCCTCCAAGTTTTAGCGCTGCGTAACG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS GCA 72 bp | CCACTGCTGCAGTTCTGCGAGCCAGGCATCCCTTGTTaGCCACGACACGTTGCGGAGGTTCAAGATGTTGAG | + |
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Preference number: 6 (lower is better) Translates to: PLLQFCEPGIPC*PRHVAEVQDVE Trigger: CTCAACATCTTGAACCTCCGCAACGTGTCGTGGGCAACAAGGGATGCCTGGCTCGCAGAACTGCAGCAGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS CCA 72 bp | TCTCGCCCAATTCAGGATTGTCAGACAGGTCTAAGGTaGAGAGGGCAGGGAAGACGCGGACCTGTTCGCAGG | + |
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Preference number: 6 (lower is better) Translates to: SRPIQDCQTGLR*RGQGRRGPVRR Trigger: CCTGCGAACAGGTCCGCGTCTTCCCTGCCCTCTCCACCTTAGACCTGTCTGACAATCCTGAATTGGGCGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS CAA 90 bp | AAGGTGGAGAGGGCAGGGAAGACGCGGACCTGTTCGCAGGAAAAGTaGAGCGAGTGTGCTTGGGCAATACTCAGTACCTTGAGTCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: KVERAGKTRTCSQEK*SECAWAILSTLSPG Trigger: GCCTGGACTCAAGGTACTGAGTATTGCCCAAGCACACTCGCTCAACTTTTCCTGCGAACAGGTCCGCGTCTTCCCTGCCCTCTCCACCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS CAA 72 bp | TTAGCCACTGCTGCAGTTCTGCGAGCCAGGCATCCCTaGTTGCCCACGACACGTTGCGGAGGTTCAAGATGT | + |
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Preference number: 6 (lower is better) Translates to: LATAAVLRARHP*LPTTRCGGSRC Trigger: ACATCTTGAACCTCCGCAACGTGTCGTGGGCAACAAGGGATGCCTGGCTCGCAGAACTGCAGCAGTGGCTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS TCA 72 bp | TTCAGCCCAGTGAAAGACAGATTGAGCGAGTTTAGCTaGCTGGGCCAGTCACAACTCGGAGCGCCTGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: FSPVKDRLSEFS*LGQSQLGAPAA Trigger: TGCTGCAGGCGCTCCGAGTTGTGACTGGCCCAGTCAGCTAAACTCGCTCAATCTGTCTTTCACTGGGCTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS GCA 72 bp | ATACTCAGTACCTTGAGTCCAGGCTTTAGCCACTGCTaGAGTTCTGCGAGCCAGGCATCCCTTGTTGCCCAC | + |
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Preference number: 6 (lower is better) Translates to: ILSTLSPGFSHC*SSASQASLVAH Trigger: GTGGGCAACAAGGGATGCCTGGCTCGCAGAACTGCAGCAGTGGCTAAAGCCTGGACTCAAGGTACTGAGTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS GCA 72 bp | GCAATACTCAGTACCTTGAGTCCAGGCTTTAGCCACTaGTGCAGTTCTGCGAGCCAGGCATCCCTTGTTGCC | + |
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Preference number: 6 (lower is better) Translates to: AILSTLSPGFSH*CSSASQASLVA Trigger: GGCAACAAGGGATGCCTGGCTCGCAGAACTGCAGCAGTGGCTAAAGCCTGGACTCAAGGTACTGAGTATTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS CCA 72 bp | CCTGTTGTAACTGAGATCCAGCACGCTGAGCTTGGCTaGCAGCCCTTTAGGTACCTGCTTCAGCCCAGTGAA | + |
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Preference number: 6 (lower is better) Translates to: PVVTEIQHAELG*QPFRYLLQPSE Trigger: TTCACTGGGCTGAAGCAGGTACCTAAAGGGCTGCCAGCCAAGCTCAGCGTGCTGGATCTCAGTTACAACAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS CAA 72 bp | AGGGCAGGGAAGACGCGGACCTGTTCGCAGGAAAAGTaGAGCGAGTGTGCTTGGGCAATACTCAGTACCTTG | + |
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Preference number: 6 (lower is better) Translates to: RAGKTRTCSQEK*SECAWAILSTL Trigger: CAAGGTACTGAGTATTGCCCAAGCACACTCGCTCAACTTTTCCTGCGAACAGGTCCGCGTCTTCCCTGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS GCA 72 bp | GACGCGGACCTGTTCGCAGGAAAAGTTGAGCGAGTGTaGTTGGGCAATACTCAGTACCTTGAGTCCAGGCTT | + |
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Preference number: 6 (lower is better) Translates to: DADLFAGKVERV*LGNTQYLESRL Trigger: AAGCCTGGACTCAAGGTACTGAGTATTGCCCAAGCACACTCGCTCAACTTTTCCTGCGAACAGGTCCGCGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS CAA 72 bp | AAAGCGCTGGACCAATCTGGCTTCGGATCTGAGAAGTaGCAGGAACAACTTTCCTCGTCTAGCTCGCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: KALDQSGFGSEK*QEQLSSSSSQG Trigger: GCCCTGCGAGCTAGACGAGGAAAGTTGTTCCTGCAACTTCTCAGATCCGAAGCCAGATTGGTCCAGCGCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS CCA 72 bp | CGGACCTGTTCGCAGGAAAAGTTGAGCGAGTGTGCTTaGGCAATACTCAGTACCTTGAGTCCAGGCTTTAGC | + |
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Preference number: 6 (lower is better) Translates to: RTCSQEKLSECA*AILSTLSPGFS Trigger: GCTAAAGCCTGGACTCAAGGTACTGAGTATTGCCCAAGCACACTCGCTCAACTTTTCCTGCGAACAGGTCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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| CDS GCA 72 bp | CGCTTTAAGGACAGAGACTTGATAATATCAGTGAACTaGCCCAGATCTGCTTCCGTGTCCACACGCTTTAGA | + |
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Preference number: 6 (lower is better) Translates to: RFKDRDLIISVN*PRSASVSTRFR Trigger: TCTAAAGCGTGTGGACACGGAAGCAGATCTGGGGCAGTTCACTGATATTATCAAGTCTCTGTCCTTAAAGCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061829.8 |
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