Pregenerated sensors for CD109 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046186Ensembl transcript IDs: ENSMUST00000093812.5
Found 160 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGCATCACTGGGCGCCATACAGCCCAATACCCAGACCCTGTGGCTaGAAGAGACTGAACAGCAGCCAGGACCAGCACTATAGAACTTCG | + |
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Preference number: 1 (lower is better) Translates to: QHHWAPYSPIPRPCG*KRLNSSQDQHYRTS Trigger: CGAAGTTCTATAGTGCTGGTCCTGGCTGCTGTTCAGTCTCTTCCAGCCACAGGGTCTGGGTATTGGGCTGTATGGCGCCCAGTGATGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| 3UTR CCA 90 bp | TCACTGAGACAGTGGGATGGGCCTACAGCAGAGTCAGGCCAGATGTaGGAAGGAACAGAGAGCAAAGTACCTCCTGTTGCTGCGATGATA | + |
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Preference number: 1 (lower is better) Translates to: SLRQWDGPTAESGQM*EGTESKVPPVAAMI Trigger: TATCATCGCAGCAACAGGAGGTACTTTGCTCTCTGTTCCTTCCCACATCTGGCCTGACTCTGCTGTAGGCCCATCCCACTGTCTCAGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| 3UTR GCA 90 bp | AGGCCAGATGTGGGAAGGAACAGAGAGCAAAGTACCTCCTGTTGCTaGGATGATAACACCAGGGCAGATGCTGAAGGACTGGATACAGGA | + |
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Preference number: 1 (lower is better) Translates to: RPDVGRNREQSTSCC*DDNTRADAEGLDTG Trigger: TCCTGTATCCAGTCCTTCAGCATCTGCCCTGGTGTTATCATCGCAGCAACAGGAGGTACTTTGCTCTCTGTTCCTTCCCACATCTGGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| 3UTR CCA 90 bp | ATAGAGACATGGCGTCGTCATCCTGGTCATCTTCCACACAAAGATTaGGTGAATTGTTTTACGTGCTTACACAAGCTCTGGCCTGTTACA | + |
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Preference number: 1 (lower is better) Translates to: IETWRRHPGHLPHKD*VNCFTCLHKLWPVT Trigger: TGTAACAGGCCAGAGCTTGTGTAAGCACGTAAAACAATTCACCCAATCTTTGTGTGGAAGATGACCAGGATGACGACGCCATGTCTCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| 3UTR TCA 90 bp | CTTTTAAAAACTTACTACCTACATTCTAAGAAAGAGTCAGCGTGCTaGTCAGAGAGTCTCACTGAGACAGTGGGATGGGCCTACAGCAGA | + |
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Preference number: 1 (lower is better) Translates to: LLKTYYLHSKKESAC*SESLTETVGWAYSR Trigger: TCTGCTGTAGGCCCATCCCACTGTCTCAGTGAGACTCTCTGATCAGCACGCTGACTCTTTCTTAGAATGTAGGTAGTAAGTTTTTAAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| 3UTR-3UTR CCA 90 bp | TGTCAGAGGGCTCTCCAGCTTGCACTCCTGAAGCAGGGTCAGAGTGAGACTGTCCAGATGCTGAAGGACTaGATACAGGAGAACCCCCAC | + |
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Preference number: 2 (lower is better) Translates to: CQRALQLALLKQGQSETVQMLKD*IQENPH Trigger: GTGGGGGTTCTCCTGTATCCAGTCCTTCAGCATCTG...GACAGTCTCACTCTGACCCTGCTTCAGGAGTGCAAGCTGGAGAGCCCTCTGACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| 3UTR-3UTR CCA 90 bp | GGAGAGTCAAGTCTGGGGCAGGTCATCAGAGCTGCAGCAGAAAAAGACCATTTTACTGAGACAGTGGGATaGGCCTACAGCAGAGTCAGG | + |
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Preference number: 2 (lower is better) Translates to: GESSLGQVIRAAAEKDHFTETVG*AYSRVR Trigger: CCTGACTCTGCTGTAGGCCCATCCCACTGTCTCAGT...AAAATGGTCTTTTTCTGCTGCAGCTCTGATGACCTGCCCCAGACTTGACTCTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| 3UTR-3UTR TCA 90 bp | GGAGAGTCAAGTCTGGGGCAGGTCATCAGAGCTGCAGCAGAAAAAGACCATTTTATCAGAGAGTCTCACTaGGACAGTGGGATGGGCCTA | + |
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Preference number: 2 (lower is better) Translates to: GESSLGQVIRAAAEKDHFIRESH*DSGMGL Trigger: TAGGCCCATCCCACTGTCTCAGTGAGACTCTCTGAT...AAAATGGTCTTTTTCTGCTGCAGCTCTGATGACCTGCCCCAGACTTGACTCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| 3UTR-3UTR TCA 90 bp | TGTAACCTATTTCAGAGTACTCAACAGGGAACACTGAAAGGGAGAGAAGAGGGGAAAGAGTCAGCGTGCTaGTCAGAGAGTCTCACTGAG | + |
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Preference number: 2 (lower is better) Translates to: CNLFQSTQQGTLKGREEGKESAC*SESLTE Trigger: CTCAGTGAGACTCTCTGATCAGCACGCTGACTCTTT...CCCCTCTTCTCTCCCTTTCAGTGTTCCCTGTTGAGTACTCTGAAATAGGTTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| 3UTR-3UTR TCA 90 bp | GCGTCGTCATCCTGGTCATCTTCCACACAAAGATTGGGTGAATTGTTTTACGTGGGAAAGGGAAACAATTaGTTTTCAGAACCGTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: ASSSWSSSTQRLGELFYVGKGNN*FSEPSE Trigger: CTCTGACGGTTCTGAAAATCAATTGTTTCCCTTTCC...CACGTAAAACAATTCACCCAATCTTTGTGTGGAAGATGACCAGGATGACGACGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| 3UTR CCA 72 bp | TCACTGGGCGCCATACAGCCCAATACCCAGACCCTGTaGCTGGAAGAGACTGAACAGCAGCCAGGACCAGCA | + |
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Preference number: 3 (lower is better) Translates to: SLGAIQPNTQTL*LEETEQQPGPA Trigger: TGCTGGTCCTGGCTGCTGTTCAGTCTCTTCCAGCCACAGGGTCTGGGTATTGGGCTGTATGGCGCCCAGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| 3UTR TCA 72 bp | GGCTCTCCAGCTTGCACTCCTGAAGCAGGGTCAGAGTaGGACTGTCGCCATGACAGAAGAGAACACCCCAGC | + |
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Preference number: 3 (lower is better) Translates to: GSPACTPEAGSE*DCRHDRREHPS Trigger: GCTGGGGTGTTCTCTTCTGTCATGGCGACAGTCTCACTCTGACCCTGCTTCAGGAGTGCAAGCTGGAGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| 3UTR CCA 72 bp | AGTCAGCGTGCTGATCAGAGAGTCTCACTGAGACAGTaGGATGGGCCTACAGCAGAGTCAGGCCAGATGTGG | + |
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Preference number: 3 (lower is better) Translates to: SQRADQRVSLRQ*DGPTAESGQMW Trigger: CCACATCTGGCCTGACTCTGCTGTAGGCCCATCCCACTGTCTCAGTGAGACTCTCTGATCAGCACGCTGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| 3UTR TCA 72 bp | ACAGCCCAATACCCAGACCCTGTGGCTGGAAGAGACTaGACAGCAGCCAGGACCAGCACTATAGAACTTCGG | + |
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Preference number: 3 (lower is better) Translates to: TAQYPDPVAGRD*TAARTSTIELR Trigger: CCGAAGTTCTATAGTGCTGGTCCTGGCTGCTGTTCAGTCTCTTCCAGCCACAGGGTCTGGGTATTGGGCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| 3UTR GCA 72 bp | GTGGGAAGGAACAGAGAGCAAAGTACCTCCTGTTGCTaGGATGATAACACCAGGGCAGATGCTGAAGGACTG | + |
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Preference number: 3 (lower is better) Translates to: VGRNREQSTSCC*DDNTRADAEGL Trigger: CAGTCCTTCAGCATCTGCCCTGGTGTTATCATCGCAGCAACAGGAGGTACTTTGCTCTCTGTTCCTTCCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| 3UTR-3UTR CAA 90 bp | TGTCAGAGGGCTCTCCAGCTTGCACTCCTGAAGCAGGGTCAGAGTGAGACTGTCTTCTCTATAAAGAAATaGGGGAGAGTCAAGTCTGGG | + |
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Preference number: 3 (lower is better) Translates to: CQRALQLALLKQGQSETVFSIKK*GRVKSG Trigger: CCCAGACTTGACTCTCCCCAATTTCTTTATAGAGAA...GACAGTCTCACTCTGACCCTGCTTCAGGAGTGCAAGCTGGAGAGCCCTCTGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| 3UTR-3UTR CAA 90 bp | TGTCAGAGGGCTCTCCAGCTTGCACTCCTGAAGCAGGGTCAGAGTGAGACTGTCCAAAGATTGGGTGAATaGTTTTACGTGCTTACACAA | + |
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Preference number: 3 (lower is better) Translates to: CQRALQLALLKQGQSETVQRLGE*FYVLTQ Trigger: TTGTGTAAGCACGTAAAACAATTCACCCAATCTTTG...GACAGTCTCACTCTGACCCTGCTTCAGGAGTGCAAGCTGGAGAGCCCTCTGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| 3UTR TCA 72 bp | ACTTACTACCTACATTCTAAGAAAGAGTCAGCGTGCTaGTCAGAGAGTCTCACTGAGACAGTGGGATGGGCC | + |
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Preference number: 3 (lower is better) Translates to: TYYLHSKKESAC*SESLTETVGWA Trigger: GGCCCATCCCACTGTCTCAGTGAGACTCTCTGATCAGCACGCTGACTCTTTCTTAGAATGTAGGTAGTAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| 3UTR TCA 72 bp | ATTCCTCATACTCTCAGTTCAGAGTGTCTCCTGGAATaGGCTCTTCTAGGCCAAGTCACGTGGGCATATGTC | + |
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Preference number: 3 (lower is better) Translates to: IPHTLSSECLLE*ALLGQVTWAYV Trigger: GACATATGCCCACGTGACTTGGCCTAGAAGAGCTCATTCCAGGAGACACTCTGAACTGAGAGTATGAGGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| 3UTR GCA 72 bp | CATCTTCCACACAAAGATTGGGTGAATTGTTTTACGTaGTTACACAAGCTCTGGCCTGTTACACTCCCCAGG | + |
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Preference number: 3 (lower is better) Translates to: HLPHKDWVNCFT*LHKLWPVTLPR Trigger: CCTGGGGAGTGTAACAGGCCAGAGCTTGTGTAAGCACGTAAAACAATTCACCCAATCTTTGTGTGGAAGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| 3UTR CCA 72 bp | TGGCGTCGTCATCCTGGTCATCTTCCACACAAAGATTaGGTGAATTGTTTTACGTGCTTACACAAGCTCTGG | + |
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Preference number: 3 (lower is better) Translates to: WRRHPGHLPHKD*VNCFTCLHKLW Trigger: CCAGAGCTTGTGTAAGCACGTAAAACAATTCACCCAATCTTTGTGTGGAAGATGACCAGGATGACGACGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| 3UTR CCA 72 bp | AAATTTCTCTATAAAGAAATTGGGGAGAGTCAAGTCTaGGGCAGGTCATCAGAGCTGCAGCAGAAAAAGACC | + |
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Preference number: 3 (lower is better) Translates to: KFLYKEIGESQV*GRSSELQQKKT Trigger: GGTCTTTTTCTGCTGCAGCTCTGATGACCTGCCCCAGACTTGACTCTCCCCAATTTCTTTATAGAGAAATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| 3UTR TCA 72 bp | ACCCTTGAAGGCAACTTTCAGTGTAATACAGCAGCATaGTACAGGAAATGTTTAAGACAGGAAAATTTCTCT | + |
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Preference number: 3 (lower is better) Translates to: TLEGNFQCNTAA*YRKCLRQENFS Trigger: AGAGAAATTTTCCTGTCTTAAACATTTCCTGTATCATGCTGCTGTATTACACTGAAAGTTGCCTTCAAGGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS-3UTR GCA 90 bp | GGAGAGTCAAGTCTGGGGCAGGTCATCAGAGCTGCAGCAGAAAAAGACCATTTTTCCACGGAGCGCGGCTaGCAGGACCCAGAGAGCGCA | + |
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Preference number: 4 (lower is better) Translates to: GESSLGQVIRAAAEKDHFSTERG*QDPESA Trigger: TGCGCTCTCTGGGTCCTGGCAGCCGCGCTCCGTGGA...AAAATGGTCTTTTTCTGCTGCAGCTCTGATGACCTGCCCCAGACTTGACTCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS-3UTR CCA 90 bp | ACCAGGGCAGATGCTGAAGGACTGGATACAGGAGAACCCCCACCCCTCACATCTGGGTCTGATGATCCCTaGGGCTGTCACCAGAAAGCG | + |
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Preference number: 4 (lower is better) Translates to: TRADAEGLDTGEPPPLTSGSDDP*GCHQKA Trigger: CGCTTTCTGGTGACAGCCCCAGGGATCATCAGACCC...AGATGTGAGGGGTGGGGGTTCTCCTGTATCCAGTCCTTCAGCATCTGCCCTGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS-3UTR TCA 90 bp | TGTCAGAGGGCTCTCCAGCTTGCACTCCTGAAGCAGGGTCAGAGTGAGACTGTCTGGACTGAGGTAACATaGGGACAGCTTCACCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: CQRALQLALLKQGQSETVWTEVT*GQLHLG Trigger: ACCCAGGTGAAGCTGTCCTCATGTTACCTCAGTCCA...GACAGTCTCACTCTGACCCTGCTTCAGGAGTGCAAGCTGGAGAGCCCTCTGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS-3UTR CCA 90 bp | TCACGTGGGCATATGTCAGAGGGCTCTCCAGCTTGCACTCCTGAAGCAGGGTCAGATTATACAGGCCTTTaGAGCCCAGGAAGCCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: SRGHMSEGSPACTPEAGSDYTGL*SPGSLW Trigger: CCAGAGGCTTCCTGGGCTCCAAAGGCCTGTATAATC...TGACCCTGCTTCAGGAGTGCAAGCTGGAGAGCCCTCTGACATATGCCCACGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS-3UTR GCA 90 bp | TGTCAGAGGGCTCTCCAGCTTGCACTCCTGAAGCAGGGTCAGAGTGAGACTGTCCCCAATAGTCACATTTaGTCCGGGTCTGATGATCCC | + |
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Preference number: 4 (lower is better) Translates to: CQRALQLALLKQGQSETVPNSHI*SGSDDP Trigger: GGGATCATCAGACCCGGAGCAAATGTGACTATTGGG...GACAGTCTCACTCTGACCCTGCTTCAGGAGTGCAAGCTGGAGAGCCCTCTGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS-3UTR TCA 90 bp | TGTCAGAGGGCTCTCCAGCTTGCACTCCTGAAGCAGGGTCAGAGTGAGACTGTCTTGAAATGGCCTCTGTaGAAGACTCCTTCTGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: CQRALQLALLKQGQSETVLKWPL*KTPSAS Trigger: GGAAGCAGAAGGAGTCTTTCACAGAGGCCATTTCAA...GACAGTCTCACTCTGACCCTGCTTCAGGAGTGCAAGCTGGAGAGCCCTCTGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS-3UTR TCA 90 bp | TCACGTGGGCATATGTCAGAGGGCTCTCCAGCTTGCACTCCTGAAGCAGGGTCACAGAGACCACATTCCTaGAATACAGCGAAGGAGTTC | + |
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Preference number: 4 (lower is better) Translates to: SRGHMSEGSPACTPEAGSQRPHS*NTAKEF Trigger: GAACTCCTTCGCTGTATTTCAGGAATGTGGTCTCTG...TGACCCTGCTTCAGGAGTGCAAGCTGGAGAGCCCTCTGACATATGCCCACGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS-3UTR TCA 90 bp | TCACGTGGGCATATGTCAGAGGGCTCTCCAGCTTGCACTCCTGAAGCAGGGTCAGTCTCCTTCCTTTTCTaGTCGCTGCATCAGCAAGTT | + |
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Preference number: 4 (lower is better) Translates to: SRGHMSEGSPACTPEAGSVSFLF*SLHQQV Trigger: AACTTGCTGATGCAGCGATCAGAAAAGGAAGGAGAC...TGACCCTGCTTCAGGAGTGCAAGCTGGAGAGCCCTCTGACATATGCCCACGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS-3UTR GCA 90 bp | TCACGTGGGCATATGTCAGAGGGCTCTCCAGCTTGCACTCCTGAAGCAGGGTCAATGCTGACAGCCAAGTaGTCCCAGAAGAGTCAATGT | + |
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Preference number: 4 (lower is better) Translates to: SRGHMSEGSPACTPEAGSMLTAK*SQKSQC Trigger: ACATTGACTCTTCTGGGAGCACTTGGCTGTCAGCAT...TGACCCTGCTTCAGGAGTGCAAGCTGGAGAGCCCTCTGACATATGCCCACGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS-3UTR CCA 90 bp | ACCAGGGCAGATGCTGAAGGACTGGATACAGGAGAACCCCCACCCCTCACATCTAGGCTGTTTCTTTGCTaGATGAGCCACCTCATAACC | + |
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Preference number: 4 (lower is better) Translates to: TRADAEGLDTGEPPPLTSRLFLC*MSHLIT Trigger: GGTTATGAGGTGGCTCATCCAGCAAAGAAACAGCCT...AGATGTGAGGGGTGGGGGTTCTCCTGTATCCAGTCCTTCAGCATCTGCCCTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS-3UTR TCA 90 bp | TGTCAGAGGGCTCTCCAGCTTGCACTCCTGAAGCAGGGTCAGAGTGAGACTGTCCCTTGTCTGTCTGAATaGGGACAGATATACTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: CQRALQLALLKQGQSETVPCLSE*GQIYSC Trigger: GCAAGAGTATATCTGTCCTCATTCAGACAGACAAGG...GACAGTCTCACTCTGACCCTGCTTCAGGAGTGCAAGCTGGAGAGCCCTCTGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS-3UTR TCA 90 bp | TGTCAGAGGGCTCTCCAGCTTGCACTCCTGAAGCAGGGTCAGAGTGAGACTGTCCCAATTGCTGTGATCTaGACTCTTTCACTGCCAATG | + |
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Preference number: 4 (lower is better) Translates to: CQRALQLALLKQGQSETVPIAVI*TLSLPM Trigger: CATTGGCAGTGAAAGAGTTCAGATCACAGCAATTGG...GACAGTCTCACTCTGACCCTGCTTCAGGAGTGCAAGCTGGAGAGCCCTCTGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS-3UTR GCA 90 bp | ACCAGGGCAGATGCTGAAGGACTGGATACAGGAGAACCCCCACCCCTCACATCTTGCCTCATTTTCCTCTaGAAAGCGTTCAGAATACTC | + |
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Preference number: 4 (lower is better) Translates to: TRADAEGLDTGEPPPLTSCLIFL*KAFRIL Trigger: GAGTATTCTGAACGCTTTGCAGAGGAAAATGAGGCA...AGATGTGAGGGGTGGGGGTTCTCCTGTATCCAGTCCTTCAGCATCTGCCCTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS-3UTR GCA 90 bp | ACCAGGGCAGATGCTGAAGGACTGGATACAGGAGAACCCCCACCCCTCACATCTAACCCAAGTGACTTGTaGACACATTCAGATTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: TRADAEGLDTGEPPPLTSNPSDL*THSDSG Trigger: ACCTGAATCTGAATGTGTGCACAAGTCACTTGGGTT...AGATGTGAGGGGTGGGGGTTCTCCTGTATCCAGTCCTTCAGCATCTGCCCTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS-3UTR CCA 90 bp | TGTCAGAGGGCTCTCCAGCTTGCACTCCTGAAGCAGGGTCAGAGTGAGACTGTCCCTGTGACGGTCAGTTaGATATCTGTATTTTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: CQRALQLALLKQGQSETVPVTVS*ISVFSL Trigger: CAAGGAAAATACAGATATCCAACTGACCGTCACAGG...GACAGTCTCACTCTGACCCTGCTTCAGGAGTGCAAGCTGGAGAGCCCTCTGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS-3UTR TCA 90 bp | TCACGTGGGCATATGTCAGAGGGCTCTCCAGCTTGCACTCCTGAAGCAGGGTCACAGCGAAGGAGTTCATaGACATGCCTAGATAATATT | + |
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Preference number: 4 (lower is better) Translates to: SRGHMSEGSPACTPEAGSQRRSS*TCLDNI Trigger: AATATTATCTAGGCATGTTCATGAACTCCTTCGCTG...TGACCCTGCTTCAGGAGTGCAAGCTGGAGAGCCCTCTGACATATGCCCACGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS-3UTR TCA 90 bp | TGTCAGAGGGCTCTCCAGCTTGCACTCCTGAAGCAGGGTCAGAGTGAGACTGTCACATCGATATTAGGCTaGTACTTTTTGTATCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: CQRALQLALLKQGQSETVTSILG*YFLYPR Trigger: CCTGGGATACAAAAAGTATCAGCCTAATATCGATGT...GACAGTCTCACTCTGACCCTGCTTCAGGAGTGCAAGCTGGAGAGCCCTCTGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS-3UTR GCA 90 bp | TGTCAGAGGGCTCTCCAGCTTGCACTCCTGAAGCAGGGTCAGAGTGAGACTGTCGGACAGATATACTCTTaGTCTCAAATGTTAAACGTG | + |
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Preference number: 4 (lower is better) Translates to: CQRALQLALLKQGQSETVGQIYS*SQMLNV Trigger: CACGTTTAACATTTGAGAGCAAGAGTATATCTGTCC...GACAGTCTCACTCTGACCCTGCTTCAGGAGTGCAAGCTGGAGAGCCCTCTGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS-3UTR GCA 90 bp | TCACGTGGGCATATGTCAGAGGGCTCTCCAGCTTGCACTCCTGAAGCAGGGTCAAAAATCAACCAGGTTTaGCTCATTTTCCTCTGCAAA | + |
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Preference number: 4 (lower is better) Translates to: SRGHMSEGSPACTPEAGSKINQV*LIFLCK Trigger: TTTGCAGAGGAAAATGAGGCAAACCTGGTTGATTTT...TGACCCTGCTTCAGGAGTGCAAGCTGGAGAGCCCTCTGACATATGCCCACGTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS-3UTR CCA 90 bp | TCAGAGGCAATCATCAGGTGTAGAAAGAAAACAATCACACTTGACTTTCTGGAACACAAGCAGAGAAGGTaGGCCGCGCTCAGGAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: SEAIIRCRKKTITLDFLEHKQRR*AALRSL Trigger: GAGGCTCCTGAGCGCGGCCCACCTTCTCTGCTTGTG...TTCCAGAAAGTCAAGTGTGATTGTTTTCTTTCTACACCTGATGATTGCCTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS-3UTR CCA 90 bp | ACCAGGGCAGATGCTGAAGGACTGGATACAGGAGAACCCCCACCCCTCACATCTTGTGAAGTTGAGAGATaGTTTCAAGACAGTCGTATA | + |
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Preference number: 4 (lower is better) Translates to: TRADAEGLDTGEPPPLTSCEVER*FQDSRI Trigger: TATACGACTGTCTTGAAACCATCTCTCAACTTCACA...AGATGTGAGGGGTGGGGGTTCTCCTGTATCCAGTCCTTCAGCATCTGCCCTGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS-3UTR CCA 90 bp | GCGTCGTCATCCTGGTCATCTTCCACACAAAGATTGGGTGAATTGTTTTACGTGGGCCGTAAGTGTTACTaGGCTTTTGGTGCCACCTTG | + |
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Preference number: 4 (lower is better) Translates to: ASSSWSSSTQRLGELFYVGRKCY*AFGATL Trigger: CAAGGTGGCACCAAAAGCCCAGTAACACTTACGGCC...CACGTAAAACAATTCACCCAATCTTTGTGTGGAAGATGACCAGGATGACGACGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS-3UTR TCA 90 bp | GGAGAGTCAAGTCTGGGGCAGGTCATCAGAGCTGCAGCAGAAAAAGACCATTTTGAAGAACGAGAGTCTTaGAATGGCCTCTGTGAAAGA | + |
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Preference number: 4 (lower is better) Translates to: GESSLGQVIRAAAEKDHFEERES*NGLCER Trigger: TCTTTCACAGAGGCCATTTCAAGACTCTCGTTCTTC...AAAATGGTCTTTTTCTGCTGCAGCTCTGATGACCTGCCCCAGACTTGACTCTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS-3UTR TCA 90 bp | TGTAACCTATTTCAGAGTACTCAACAGGGAACACTGAAAGGGAGAGAAGAGGGGTCTTCAGGAGTTAGTTaGTTGCCATCAGAGCGGCTG | + |
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Preference number: 4 (lower is better) Translates to: CNLFQSTQQGTLKGREEGSSGVS*LPSERL Trigger: CAGCCGCTCTGATGGCAATCAACTAACTCCTGAAGA...CCCCTCTTCTCTCCCTTTCAGTGTTCCCTGTTGAGTACTCTGAAATAGGTTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS-3UTR TCA 90 bp | GCGTCGTCATCCTGGTCATCTTCCACACAAAGATTGGGTGAATTGTTTTACGTGGTGTCGCAGAGATCCTaGGAGAGACCTTATCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: ASSSWSSSTQRLGELFYVVSQRS*ERPYQM Trigger: CATCTGATAAGGTCTCTCTCAGGATCTCTGCGACAC...CACGTAAAACAATTCACCCAATCTTTGTGTGGAAGATGACCAGGATGACGACGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS-3UTR TCA 90 bp | GCGTCGTCATCCTGGTCATCTTCCACACAAAGATTGGGTGAATTGTTTTACGTGAGTTGGTGTCTGGACTaGGGTAACATGAGGACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ASSSWSSSTQRLGELFYVSWCLD*GNMRTA Trigger: AGCTGTCCTCATGTTACCTCAGTCCAGACACCAACT...CACGTAAAACAATTCACCCAATCTTTGTGTGGAAGATGACCAGGATGACGACGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS-3UTR GCA 90 bp | GCGTCGTCATCCTGGTCATCTTCCACACAAAGATTGGGTGAATTGTTTTACGTGCCCAGGCTGTTTCTTTaGTGGATGAGCCACCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: ASSSWSSSTQRLGELFYVPRLFL*WMSHLI Trigger: TATGAGGTGGCTCATCCAGCAAAGAAACAGCCTGGG...CACGTAAAACAATTCACCCAATCTTTGTGTGGAAGATGACCAGGATGACGACGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS-3UTR GCA 90 bp | TGTAACCTATTTCAGAGTACTCAACAGGGAACACTGAAAGGGAGAGAAGAGGGGGCAAATCCCGAGCCATaGGCAGAAACATTAACGGTG | + |
|
Preference number: 4 (lower is better) Translates to: CNLFQSTQQGTLKGREEGANPEP*AETLTV Trigger: CACCGTTAATGTTTCTGCGCATGGCTCGGGATTTGC...CCCCTCTTCTCTCCCTTTCAGTGTTCCCTGTTGAGTACTCTGAAATAGGTTACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS-3UTR CCA 90 bp | TCACGTGGGCATATGTCAGAGGGCTCTCCAGCTTGCACTCCTGAAGCAGGGTCAGGAAATGGACATGACTaGGAATTCAATCTTAATGAT | + |
|
Preference number: 4 (lower is better) Translates to: SRGHMSEGSPACTPEAGSGNGHD*EFNLND Trigger: ATCATTAAGATTGAATTCCCAGTCATGTCCATTTCC...TGACCCTGCTTCAGGAGTGCAAGCTGGAGAGCCCTCTGACATATGCCCACGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS-3UTR TCA 90 bp | TGTAACCTATTTCAGAGTACTCAACAGGGAACACTGAAAGGGAGAGAAGAGGGGAAAACCCAGGTCTTCTaGGATGACAAAAGCCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: CNLFQSTQQGTLKGREEGKTQVF*DDKSRS Trigger: GCTTCGGCTTTTGTCATCTCAGAAGACCTGGGTTTT...CCCCTCTTCTCTCCCTTTCAGTGTTCCCTGTTGAGTACTCTGAAATAGGTTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS-3UTR CCA 90 bp | TGTAACCTATTTCAGAGTACTCAACAGGGAACACTGAAAGGGAGAGAAGAGGGGGTGTTACTGGGCTTTTaGTGCCACCTTGAAGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: CNLFQSTQQGTLKGREEGVLLGF*CHLEVH Trigger: GTGAACTTCAAGGTGGCACCAAAAGCCCAGTAACAC...CCCCTCTTCTCTCCCTTTCAGTGTTCCCTGTTGAGTACTCTGAAATAGGTTACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS-3UTR TCA 90 bp | GGAGAGTCAAGTCTGGGGCAGGTCATCAGAGCTGCAGCAGAAAAAGACCATTTTGCTGGGTCACTACTGTaGCCAAATCATTTTCTATTT | + |
|
Preference number: 4 (lower is better) Translates to: GESSLGQVIRAAAEKDHFAGSLL*PNHFLF Trigger: AAATAGAAAATGATTTGGTCACAGTAGTGACCCAGC...AAAATGGTCTTTTTCTGCTGCAGCTCTGATGACCTGCCCCAGACTTGACTCTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS-3UTR TCA 90 bp | GCAATCATCAGGTGTAGAAAGAAAACAATCACACTTGACTTTCTGGAAATGCTAATCAGAGGCAGTGGGTaGGGCAGCCGTCACTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: AIIRCRKKTITLDFLEMLIRGSG*GSRHCD Trigger: ATCACAGTGACGGCTGCCTCACCCACTGCCTCTGAT...TAGCATTTCCAGAAAGTCAAGTGTGATTGTTTTCTTTCTACACCTGATGATTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| 3UTR CAA 72 bp | ATGGCGTCGTCATCCTGGTCATCTTCCACACAAAGATaGGGTGAATTGTTTTACGTGCTTACACAAGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: MASSSWSSSTQR*GELFYVLTQAL Trigger: CAGAGCTTGTGTAAGCACGTAAAACAATTCACCCAATCTTTGTGTGGAAGATGACCAGGATGACGACGCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS-3UTR TCA 90 bp | GCGTCGTCATCCTGGTCATCTTCCACACAAAGATTGGGTGAATTGTTTTACGTGAATGCCTTGTCTGTCTaGATGAGGACAGATATACTC | + |
|
Preference number: 4 (lower is better) Translates to: ASSSWSSSTQRLGELFYVNALSV*MRTDIL Trigger: GAGTATATCTGTCCTCATTCAGACAGACAAGGCATT...CACGTAAAACAATTCACCCAATCTTTGTGTGGAAGATGACCAGGATGACGACGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS-3UTR CCA 90 bp | TGTAACCTATTTCAGAGTACTCAACAGGGAACACTGAAAGGGAGAGAAGAGGGGGTGAATCACTCTTCCTaGCTCCCAAAATTCACCATT | + |
|
Preference number: 4 (lower is better) Translates to: CNLFQSTQQGTLKGREEGVNHSS*LPKFTI Trigger: AATGGTGAATTTTGGGAGCCAGGAAGAGTGATTCAC...CCCCTCTTCTCTCCCTTTCAGTGTTCCCTGTTGAGTACTCTGAAATAGGTTACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS-3UTR CCA 90 bp | AAAACAATCACACTTGACTTTCTGGAAATGCTAGTTTTAGACGGAGTCCTTGAAATTCCCTCAGACACATaGTGCAGAGTGTGCGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KTITLDFLEMLVLDGVLEIPSDT*CRVCAS Trigger: GCTGGCGCACACTCTGCACCATGTGTCTGAGGGAAT...TTCAAGGACTCCGTCTAAAACTAGCATTTCCAGAAAGTCAAGTGTGATTGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| 3UTR CAA 72 bp | TCATCCTGGTCATCTTCCACACAAAGATTGGGTGAATaGTTTTACGTGCTTACACAAGCTCTGGCCTGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: SSWSSSTQRLGE*FYVLTQALACY Trigger: GTAACAGGCCAGAGCTTGTGTAAGCACGTAAAACAATTCACCCAATCTTTGTGTGGAAGATGACCAGGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS-3UTR TCA 90 bp | TCAGAGGCAATCATCAGGTGTAGAAAGAAAACAATCACACTTGACTTTCTGGAAGATCTGAGCAGAGTGTaGGCACCCGAAACTTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: SEAIIRCRKKTITLDFLEDLSRV*APETSL Trigger: AAGTGAAGTTTCGGGTGCTCACACTCTGCTCAGATC...TTCCAGAAAGTCAAGTGTGATTGTTTTCTTTCTACACCTGATGATTGCCTCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS-3UTR TCA 90 bp | GCAATCATCAGGTGTAGAAAGAAAACAATCACACTTGACTTTCTGGAAATGCTACTACAATTGTCTGGGTaGCAGCATCAGAGGCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AIIRCRKKTITLDFLEMLLQLSG*QHQRQW Trigger: CCACTGCCTCTGATGCTGTCACCCAGACAATTGTAG...TAGCATTTCCAGAAAGTCAAGTGTGATTGTTTTCTTTCTACACCTGATGATTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS-3UTR TCA 90 bp | GCAATCATCAGGTGTAGAAAGAAAACAATCACACTTGACTTTCTGGAAATGCTACATGCCTGTCCTCTCTaGACCCAAGTGACTTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: AIIRCRKKTITLDFLEMLHACPL*TQVTCA Trigger: TGCACAAGTCACTTGGGTTCAGAGAGGACAGGCATG...TAGCATTTCCAGAAAGTCAAGTGTGATTGTTTTCTTTCTACACCTGATGATTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS-3UTR CCA 90 bp | GCGTCGTCATCCTGGTCATCTTCCACACAAAGATTGGGTGAATTGTTTTACGTGTCTCTGGTTTTAAGCTaGATGTACGTCTTACTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ASSSWSSSTQRLGELFYVSLVLS*MYVLLG Trigger: TCCTAGTAAGACGTACATCCAGCTTAAAACCAGAGA...CACGTAAAACAATTCACCCAATCTTTGTGTGGAAGATGACCAGGATGACGACGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS-3UTR TCA 90 bp | GCGTCGTCATCCTGGTCATCTTCCACACAAAGATTGGGTGAATTGTTTTACGTGCCGAAATTCCTCTGCTaGATTCAAATTCCAAAAACT | + |
|
Preference number: 4 (lower is better) Translates to: ASSSWSSSTQRLGELFYVPKFLC*IQIPKT Trigger: AGTTTTTGGAATTTGAATTCAGCAGAGGAATTTCGG...CACGTAAAACAATTCACCCAATCTTTGTGTGGAAGATGACCAGGATGACGACGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS-3UTR TCA 90 bp | TGTAACCTATTTCAGAGTACTCAACAGGGAACACTGAAAGGGAGAGAAGAGGGGTCTTTTAGAAGAACCTaGACCTTTCACGTTATAGTC | + |
|
Preference number: 4 (lower is better) Translates to: CNLFQSTQQGTLKGREEGSFRRT*TFHVIV Trigger: GACTATAACGTGAAAGGTTCAGGTTCTTCTAAAAGA...CCCCTCTTCTCTCCCTTTCAGTGTTCCCTGTTGAGTACTCTGAAATAGGTTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS-3UTR CCA 90 bp | TCAGAGGCAATCATCAGGTGTAGAAAGAAAACAATCACACTTGACTTTCTGGAACAACAGTATCCTGAGTaGATACAAAACCTCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SEAIIRCRKKTITLDFLEQQYPE*IQNLPG Trigger: GCCTGGGAGGTTTTGTATCCACTCAGGATACTGTTG...TTCCAGAAAGTCAAGTGTGATTGTTTTCTTTCTACACCTGATGATTGCCTCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS-3UTR TCA 90 bp | GCAATCATCAGGTGTAGAAAGAAAACAATCACACTTGACTTTCTGGAAATGCTATGGGAAAAACAAGAGTaGCCCCATTATCCCTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: AIIRCRKKTITLDFLEMLWEKQE*PHYPWE Trigger: TTCCCAGGGATAATGGGGTCACTCTTGTTTTTCCCA...TAGCATTTCCAGAAAGTCAAGTGTGATTGTTTTCTTTCTACACCTGATGATTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS-3UTR TCA 90 bp | AAAACAATCACACTTGACTTTCTGGAAATGCTAGTTTTAGACGGAGTCCTTGAACTCTCTGAACCCAAGTaGCTTGTGCACACATTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KTITLDFLEMLVLDGVLELSEPK*LVHTFR Trigger: TCTGAATGTGTGCACAAGTCACTTGGGTTCAGAGAG...TTCAAGGACTCCGTCTAAAACTAGCATTTCCAGAAAGTCAAGTGTGATTGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS-3UTR TCA 90 bp | GCAATCATCAGGTGTAGAAAGAAAACAATCACACTTGACTTTCTGGAAATGCTATATCTCCAATTGCTGTaGTCTGAACTCTTTCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: AIIRCRKKTITLDFLEMLYLQLL*SELFHC Trigger: GCAGTGAAAGAGTTCAGATCACAGCAATTGGAGATA...TAGCATTTCCAGAAAGTCAAGTGTGATTGTTTTCTTTCTACACCTGATGATTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS-3UTR TCA 90 bp | TCAGAGGCAATCATCAGGTGTAGAAAGAAAACAATCACACTTGACTTTCTGGAACATCAAATCAAAAGGTaGCCCCACCTTTATATATTC | + |
|
Preference number: 4 (lower is better) Translates to: SEAIIRCRKKTITLDFLEHQIKR*PHLYIF Trigger: GAATATATAAAGGTGGGGTCACCTTTTGATTTGATG...TTCCAGAAAGTCAAGTGTGATTGTTTTCTTTCTACACCTGATGATTGCCTCTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS-3UTR CCA 90 bp | AAAACAATCACACTTGACTTTCTGGAAATGCTAGTTTTAGACGGAGTCCTTGAATCACTTGAACCTGAATaGACCAGTCACCAAATATTG | + |
|
Preference number: 4 (lower is better) Translates to: KTITLDFLEMLVLDGVLESLEPE*TSHQIL Trigger: CAATATTTGGTGACTGGTCCATTCAGGTTCAAGTGA...TTCAAGGACTCCGTCTAAAACTAGCATTTCCAGAAAGTCAAGTGTGATTGTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS-3UTR GCA 90 bp | AAAACAATCACACTTGACTTTCTGGAAATGCTAGTTTTAGACGGAGTCCTTGAAAAGGATATCTCCAATTaGTGTGATCTGAACTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KTITLDFLEMLVLDGVLEKDISN*CDLNSF Trigger: GAAAGAGTTCAGATCACAGCAATTGGAGATATCCTT...TTCAAGGACTCCGTCTAAAACTAGCATTTCCAGAAAGTCAAGTGTGATTGTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS-3UTR GCA 90 bp | AAAACAATCACACTTGACTTTCTGGAAATGCTAGTTTTAGACGGAGTCCTTGAATCTGTATTTTCCTTGTaGACAAGGGCTGAAAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: KTITLDFLEMLVLDGVLESVFSL*TRAENS Trigger: TGAATTTTCAGCCCTTGTGCACAAGGAAAATACAGA...TTCAAGGACTCCGTCTAAAACTAGCATTTCCAGAAAGTCAAGTGTGATTGTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS-3UTR CCA 90 bp | AAAACAATCACACTTGACTTTCTGGAAATGCTAGTTTTAGACGGAGTCCTTGAATTAAACGTGTCCTGTTaGAGAATACGATCTCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: KTITLDFLEMLVLDGVLELNVSC*RIRSHS Trigger: AGAATGAGATCGTATTCTCCAACAGGACACGTTTAA...TTCAAGGACTCCGTCTAAAACTAGCATTTCCAGAAAGTCAAGTGTGATTGTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS-3UTR CCA 90 bp | GCAATCATCAGGTGTAGAAAGAAAACAATCACACTTGACTTTCTGGAAATGCTAGGTATATGGTGCCATTaGTGTCATTTGAAGTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: AIIRCRKKTITLDFLEMLGIWCH*CHLKSL Trigger: TAATGACTTCAAATGACACCAATGGCACCATATACC...TAGCATTTCCAGAAAGTCAAGTGTGATTGTTTTCTTTCTACACCTGATGATTGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS CCA 90 bp | GAGATCCACCCCAATAGTCACATTTGCTCCGGGTCTGATGATCCCTaGGGCTGTCACCAGAAAGCGGGACCCTGGGGCGGCCAGCGCGAC | + |
|
Preference number: 5 (lower is better) Translates to: EIHPNSHICSGSDDP*GCHQKAGPWGGQRD Trigger: GTCGCGCTGGCCGCCCCAGGGTCCCGCTTTCTGGTGACAGCCCCAGGGATCATCAGACCCGGAGCAAATGTGACTATTGGGGTGGATCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS GCA 90 bp | AACCGGGATTCCCTCAGACACATGGTGCAGAGTGTGCGCCAGCAGTaGATAAGCAGCGATTTCGATGTCCACGGAGCGCGGCTGCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: NRDSLRHMVQSVRQQ*ISSDFDVHGARLPG Trigger: TCCTGGCAGCCGCGCTCCGTGGACATCGAAATCGCTGCTTATGCACTGCTGGCGCACACTCTGCACCATGTGTCTGAGGGAATCCCGGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS-3UTR CAA 90 bp | ACCAGGGCAGATGCTGAAGGACTGGATACAGGAGAACCCCCACCCCTCACATCTCGATTATACAGGCCTTaGGAGCCCAGGAAGCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: TRADAEGLDTGEPPPLTSRLYRP*EPRKPL Trigger: CAGAGGCTTCCTGGGCTCCAAAGGCCTGTATAATCG...AGATGTGAGGGGTGGGGGTTCTCCTGTATCCAGTCCTTCAGCATCTGCCCTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS TCA 90 bp | AGGCTTTACTACAATTGTCTGGGTGACAGCATCAGAGGCAGTGGGTaGGGCAGCCGTCACTGTGATGGGAATCTCTCCCAAGTGCGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: RLYYNCLGDSIRGSG*GSRHCDGNLSQVRG Trigger: CCCACGCACTTGGGAGAGATTCCCATCACAGTGACGGCTGCCTCACCCACTGCCTCTGATGCTGTCACCCAGACAATTGTAGTAAAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS TCA 90 bp | AGTCCGTGGCTCCGTCCGTGTGTGACTTGCAGTTGGTGTCTGGACTaGGGTAACATGAGGACAGCTTCACCTGGGTGTTGTAGCTTCGCA | + |
|
Preference number: 5 (lower is better) Translates to: SPWLRPCVTCSWCLD*GNMRTASPGCCSFA Trigger: TGCGAAGCTACAACACCCAGGTGAAGCTGTCCTCATGTTACCTCAGTCCAGACACCAACTGCAAGTCACACACGGACGGAGCCACGGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS GCA 90 bp | GCAGTGGGTGAGGCAGCCGTCACTGTGATGGGAATCTCTCCCAAGTaGGTGGGCTTGATGGGAAAAACAAGAGTGACCCCATTATCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: AVGEAAVTVMGISPK*VGLMGKTRVTPLSL Trigger: CAGGGATAATGGGGTCACTCTTGTTTTTCCCATCAAGCCCACGCACTTGGGAGAGATTCCCATCACAGTGACGGCTGCCTCACCCACTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS-3UTR CAA 90 bp | TGTCAGAGGGCTCTCCAGCTTGCACTCCTGAAGCAGGGTCAGAGTGAGACTGTCGTTCTTGAACTTTGTTaGCCTGCAGCCACCAACTGT | + |
|
Preference number: 5 (lower is better) Translates to: CQRALQLALLKQGQSETVVLELC*PAATNC Trigger: ACAGTTGGTGGCTGCAGGCAAACAAAGTTCAAGAAC...GACAGTCTCACTCTGACCCTGCTTCAGGAGTGCAAGCTGGAGAGCCCTCTGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS-3UTR CAA 90 bp | TCACGTGGGCATATGTCAGAGGGCTCTCCAGCTTGCACTCCTGAAGCAGGGTCATTGCTGATCATTCACTaGAACCTGAATGGACCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SRGHMSEGSPACTPEAGSLLIIH*NLNGPV Trigger: GACTGGTCCATTCAGGTTCAAGTGAATGATCAGCAA...TGACCCTGCTTCAGGAGTGCAAGCTGGAGAGCCCTCTGACATATGCCCACGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS-3UTR CAA 90 bp | ACCAGGGCAGATGCTGAAGGACTGGATACAGGAGAACCCCCACCCCTCACATCTACAGTGGCTGTGAAGTaGAGAGATGGTTTCAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: TRADAEGLDTGEPPPLTSTVAVK*RDGFKT Trigger: TGTCTTGAAACCATCTCTCAACTTCACAGCCACTGT...AGATGTGAGGGGTGGGGGTTCTCCTGTATCCAGTCCTTCAGCATCTGCCCTGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS-3UTR CAA 90 bp | ACCAGGGCAGATGCTGAAGGACTGGATACAGGAGAACCCCCACCCCTCACATCTCAAAATCAACCAGGTTaGCCTCATTTTCCTCTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: TRADAEGLDTGEPPPLTSQNQPG*PHFPLQ Trigger: TTGCAGAGGAAAATGAGGCAAACCTGGTTGATTTTG...AGATGTGAGGGGTGGGGGTTCTCCTGTATCCAGTCCTTCAGCATCTGCCCTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS TCA 90 bp | TCTTATCTGCACTGCTCAGAGGTAGTGCCGGAAGAACGAGAGTCTTaGAATGGCCTCTGTGAAAGACTCCTTCTGCTTCCAGGATGGATC | + |
|
Preference number: 5 (lower is better) Translates to: SYLHCSEVVPEERES*NGLCERLLLLPGWI Trigger: GATCCATCCTGGAAGCAGAAGGAGTCTTTCACAGAGGCCATTTCAAGACTCTCGTTCTTCCGGCACTACCTCTGAGCAGTGCAGATAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS-3UTR CAA 90 bp | TCACGTGGGCATATGTCAGAGGGCTCTCCAGCTTGCACTCCTGAAGCAGGGTCATCCTTGAATTGTCTGTaGCCACTAACCATCAAATCA | + |
|
Preference number: 5 (lower is better) Translates to: SRGHMSEGSPACTPEAGSSLNCL*PLTIKS Trigger: TGATTTGATGGTTAGTGGCAACAGACAATTCAAGGA...TGACCCTGCTTCAGGAGTGCAAGCTGGAGAGCCCTCTGACATATGCCCACGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS-3UTR CAA 90 bp | TCACGTGGGCATATGTCAGAGGGCTCTCCAGCTTGCACTCCTGAAGCAGGGTCAGGAGAATCTCATAGATaGCTGCTTACTTTCTACGTT | + |
|
Preference number: 5 (lower is better) Translates to: SRGHMSEGSPACTPEAGSGESHR*LLTFYV Trigger: AACGTAGAAAGTAAGCAGCAATCTATGAGATTCTCC...TGACCCTGCTTCAGGAGTGCAAGCTGGAGAGCCCTCTGACATATGCCCACGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS TCA 90 bp | CTCAGAGGTAGTGCCGGAAGAACGAGAGTCTTGAAATGGCCTCTGTaGAAGACTCCTTCTGCTTCCAGGATGGATCTCGATTTGTTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LRGSAGRTRVLKWPL*KTPSASRMDLDLLE Trigger: TTCCAACAAATCGAGATCCATCCTGGAAGCAGAAGGAGTCTTTCACAGAGGCCATTTCAAGACTCTCGTTCTTCCGGCACTACCTCTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS GCA 90 bp | ATGCCGGGCCCTGTGACGGTCAGTTGGATATCTGTATTTTCCTTGTaGACAAGGGCTGAAAATTCAGATAATGCCTTCAGGGCCACAACA | + |
|
Preference number: 5 (lower is better) Translates to: MPGPVTVSWISVFSL*TRAENSDNAFRATT Trigger: TGTTGTGGCCCTGAAGGCATTATCTGAATTTTCAGCCCTTGTGCACAAGGAAAATACAGATATCCAACTGACCGTCACAGGGCCCGGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS TCA 90 bp | AGGGCTGAAAATTCAGATAATGCCTTCAGGGCCACAACAGTATCCTaGGTGGATACAAAACCTCCCAGGCTGTTTCTTTGCTGGATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RAENSDNAFRATTVS*VDTKPPRLFLCWMS Trigger: GCTCATCCAGCAAAGAAACAGCCTGGGAGGTTTTGTATCCACTCAGGATACTGTTGTGGCCCTGAAGGCATTATCTGAATTTTCAGCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS TCA 90 bp | GCCACTGAGAAGGTTCACTTCCATAAGGACCATGCCTGTCCTCTCTaGACCCAAGTGACTTGTGCACACATTCAGATTCAGGTGACTAAT | + |
|
Preference number: 5 (lower is better) Translates to: ATEKVHFHKDHACPL*TQVTCAHIQIQVTN Trigger: ATTAGTCACCTGAATCTGAATGTGTGCACAAGTCACTTGGGTTCAGAGAGGACAGGCATGGTCCTTATGGAAGTGAACCTTCTCAGTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS-3UTR CAA 90 bp | TGTAACCTATTTCAGAGTACTCAACAGGGAACACTGAAAGGGAGAGAAGAGGGGGAAAAGGAAAAACGGTaGGAAGGCTTGCAGCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CNLFQSTQQGTLKGREEGEKEKR*EGLQLC Trigger: GCAGAGCTGCAAGCCTTCCAACCGTTTTTCCTTTTC...CCCCTCTTCTCTCCCTTTCAGTGTTCCCTGTTGAGTACTCTGAAATAGGTTACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS TCA 90 bp | ATCCTTAATGAAAATGTCCACGGATGTCCTATAAGGCTTGAGATCTaGGCAGAGTGTGAGCACCCGAAACTTCACTTCCTGCTTCGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: ILNENVHGCPIRLEI*AECEHPKLHFLLRL Trigger: AAGCCGAAGCAGGAAGTGAAGTTTCGGGTGCTCACACTCTGCTCAGATCTCAAGCCTTATAGGACATCCGTGGACATTTTCATTAAGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS TCA 90 bp | GGCTTGATGGGAAAAACAAGAGTGACCCCATTATCCCTGGGAACTTaGACAGTCTTCCGGTATATGGTGCCATTGGTGTCATTTGAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: GLMGKTRVTPLSLGT*TVFRYMVPLVSFEV Trigger: GACTTCAAATGACACCAATGGCACCATATACCGGAAGACTGTTCAAGTTCCCAGGGATAATGGGGTCACTCTTGTTTTTCCCATCAAGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS GCA 90 bp | GAGTGTGAGCACCCGAAACTTCACTTCCTGCTTCGGCTTGTAGAATaGCTTGTCTGTCTGAATGAGGACAGATATACTCTTGCTCTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: ECEHPKLHFLLRLVE*LVCLNEDRYTLALK Trigger: TTTGAGAGCAAGAGTATATCTGTCCTCATTCAGACAGACAAGGCATTCTACAAGCCGAAGCAGGAAGTGAAGTTTCGGGTGCTCACACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS-3UTR CAA 90 bp | GGAGAGTCAAGTCTGGGGCAGGTCATCAGAGCTGCAGCAGAAAAAGACCATTTTATAGAGAAGCTCCCTTaGGTAACCTTGCCTCATATA | + |
|
Preference number: 5 (lower is better) Translates to: GESSLGQVIRAAAEKDHFIEKLP*VTLPHI Trigger: TATATGAGGCAAGGTTACCAAAGGGAGCTTCTCTAT...AAAATGGTCTTTTTCTGCTGCAGCTCTGATGACCTGCCCCAGACTTGACTCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS CCA 90 bp | TTTGTATCCCAGGACAGAAGTCACAATATAGGCCGTAAGTGTTACTaGGCTTTTGGTGCCACCTTGAAGTTCACTGTGAATCACTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: FVSQDRSHNIGRKCY*AFGATLKFTVNHSS Trigger: GGAAGAGTGATTCACAGTGAACTTCAAGGTGGCACCAAAAGCCCAGTAACACTTACGGCCTATATTGTGACTTCTGTCCTGGGATACAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS CCA 90 bp | GGAGTCAGACTGTGTCGCAGAGATCCTGAGAGAGACCTTATCAGATaGCTTGACTGTAGGTTTACTCCAAAACAGCTTTACCTTATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GVRLCRRDPERDLIR*LDCRFTPKQLYLIF Trigger: GAAAATAAGGTAAAGCTGTTTTGGAGTAAACCTACAGTCAAGCCATCTGATAAGGTCTCTCTCAGGATCTCTGCGACACAGTCTGACTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS-3UTR CAA 90 bp | GCGTCGTCATCCTGGTCATCTTCCACACAAAGATTGGGTGAATTGTTTTACGTGGTTAAACGTGTCCTGTaGGAGAATACGATCTCATTC | + |
|
Preference number: 5 (lower is better) Translates to: ASSSWSSSTQRLGELFYVVKRVL*ENTISF Trigger: GAATGAGATCGTATTCTCCAACAGGACACGTTTAAC...CACGTAAAACAATTCACCCAATCTTTGTGTGGAAGATGACCAGGATGACGACGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS-3UTR CAA 90 bp | TGTAACCTATTTCAGAGTACTCAACAGGGAACACTGAAAGGGAGAGAAGAGGGGCGGTATATGGTGCCATaGGTGTCATTTGAAGTCATT | + |
|
Preference number: 5 (lower is better) Translates to: CNLFQSTQQGTLKGREEGRYMVP*VSFEVI Trigger: AATGACTTCAAATGACACCAATGGCACCATATACCG...CCCCTCTTCTCTCCCTTTCAGTGTTCCCTGTTGAGTACTCTGAAATAGGTTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS TCA 90 bp | ACTTCACTTCCTGCTTCGGCTTGTAGAATGCCTTGTCTGTCTGAATaGGGACAGATATACTCTTGCTCTCAAATGTTAAACGTGTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: TSLPASACRMPCLSE*GQIYSCSQMLNVSC Trigger: ACAGGACACGTTTAACATTTGAGAGCAAGAGTATATCTGTCCTCATTCAGACAGACAAGGCATTCTACAAGCCGAAGCAGGAAGTGAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS CCA 90 bp | GCCATCAGAGCGGCTGACCTTCACAGTGGCTGTGAAGTTGAGAGATaGTTTCAAGACAGTCGTATAATCAAAAATCTCAATGATGTAATC | + |
|
Preference number: 5 (lower is better) Translates to: AIRAADLHSGCEVER*FQDSRIIKNLNDVI Trigger: GATTACATCATTGAGATTTTTGATTATACGACTGTCTTGAAACCATCTCTCAACTTCACAGCCACTGTGAAGGTCAGCCGCTCTGATGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS-3UTR CAA 90 bp | AAAACAATCACACTTGACTTTCTGGAAATGCTAGTTTTAGACGGAGTCCTTGAAGCTCTGCTGGAACGGTaGTTAACCCAAAACCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: KTITLDFLEMLVLDGVLEALLER*LTQNPG Trigger: ACCTGGGTTTTGGGTTAACAACCGTTCCAGCAGAGC...TTCAAGGACTCCGTCTAAAACTAGCATTTCCAGAAAGTCAAGTGTGATTGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS-3UTR CAA 90 bp | GCAATCATCAGGTGTAGAAAGAAAACAATCACACTTGACTTTCTGGAAATGCTATCCCAGGCTGTTTCTTaGCTGGATGAGCCACCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: AIIRCRKKTITLDFLEMLSQAVS*LDEPPH Trigger: ATGAGGTGGCTCATCCAGCAAAGAAACAGCCTGGGA...TAGCATTTCCAGAAAGTCAAGTGTGATTGTTTTCTTTCTACACCTGATGATTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS GCA 90 bp | TCACTGCCAATGACCGTATCAGGAGGAAAGGAGAATCTCATAGATTaGTGCTTACTTTCTACGTTGCTATCTGTCAGATCCAATAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: SLPMTVSGGKENLID*CLLSTLLSVRSNKT Trigger: TGTCTTATTGGATCTGACAGATAGCAACGTAGAAAGTAAGCAGCAATCTATGAGATTCTCCTTTCCTCCTGATACGGTCATTGGCAGTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS-3UTR CAA 90 bp | TGTAACCTATTTCAGAGTACTCAACAGGGAACACTGAAAGGGAGAGAAGAGGGGATATCTGTATTTTCCTaGTGCACAAGGGCTGAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: CNLFQSTQQGTLKGREEGISVFS*CTRAEN Trigger: ATTTTCAGCCCTTGTGCACAAGGAAAATACAGATAT...CCCCTCTTCTCTCCCTTTCAGTGTTCCCTGTTGAGTACTCTGAAATAGGTTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS-3UTR CAA 90 bp | AAAACAATCACACTTGACTTTCTGGAAATGCTAGTTTTAGACGGAGTCCTTGAAGCACTGCCTGTCTCCTaGGTTCATAGTAGTCCATTA | + |
|
Preference number: 5 (lower is better) Translates to: KTITLDFLEMLVLDGVLEALPVS*VHSSPL Trigger: TAATGGACTACTATGAACCAAGGAGACAGGCAGTGC...TTCAAGGACTCCGTCTAAAACTAGCATTTCCAGAAAGTCAAGTGTGATTGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS TCA 90 bp | TCAACACCCAGAGACCACATTCCTGAAATACAGCGAAGGAGTTCATaGACATGCCTAGATAATATTCTGTGTTATAAAGTTCCAGTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: STPRDHIPEIQRRSS*TCLDNILCYKVPVH Trigger: ATGAACTGGAACTTTATAACACAGAATATTATCTAGGCATGTTCATGAACTCCTTCGCTGTATTTCAGGAATGTGGTCTCTGGGTGTTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS-3UTR CAA 90 bp | AAAACAATCACACTTGACTTTCTGGAAATGCTAGTTTTAGACGGAGTCCTTGAAAGGATGGATCTCGATTaGTTGGAAGCTATCTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: KTITLDFLEMLVLDGVLERMDLD*LEAILN Trigger: GTTCAAGATAGCTTCCAACAAATCGAGATCCATCCT...TTCAAGGACTCCGTCTAAAACTAGCATTTCCAGAAAGTCAAGTGTGATTGTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS-3UTR CAA 90 bp | AAAACAATCACACTTGACTTTCTGGAAATGCTAGTTTTAGACGGAGTCCTTGAAGGACTGTCACAGAACTaGTACCATCAAGAAAATAAG | + |
|
Preference number: 5 (lower is better) Translates to: KTITLDFLEMLVLDGVLEGLSQN*YHQENK Trigger: CTTATTTTCTTGATGGTACAAGTTCTGTGACAGTCC...TTCAAGGACTCCGTCTAAAACTAGCATTTCCAGAAAGTCAAGTGTGATTGTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS-3UTR CAA 90 bp | GCAATCATCAGGTGTAGAAAGAAAACAATCACACTTGACTTTCTGGAAATGCTAATCAATGTTACACTTTaGTCAACAGCTACAATCCCC | + |
|
Preference number: 5 (lower is better) Translates to: AIIRCRKKTITLDFLEMLINVTL*STATIP Trigger: GGGGATTGTAGCTGTTGACAAAAGTGTAACATTGAT...TAGCATTTCCAGAAAGTCAAGTGTGATTGTTTTCTTTCTACACCTGATGATTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS-3UTR CAA 90 bp | GCAATCATCAGGTGTAGAAAGAAAACAATCACACTTGACTTTCTGGAAATGCTATTAAAGAGAAAGTTCTaGAACTTTGTTTGCCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: AIIRCRKKTITLDFLEMLLKRKF*NFVCLQ Trigger: CTGCAGGCAAACAAAGTTCAAGAACTTTCTCTTTAA...TAGCATTTCCAGAAAGTCAAGTGTGATTGTTTTCTTTCTACACCTGATGATTGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS TCA 90 bp | ATTGTCCGAAATTCCTCTGCTGAATTCAAATTCCAAAAACTTGATTaGGTCTTGTACATCGATATTAGGCTGATACTTTTTGTATCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: IVRNSSAEFKFQKLD*VLYIDIRLILFVSQ Trigger: CTGGGATACAAAAAGTATCAGCCTAATATCGATGTACAAGACTCAATCAAGTTTTTGGAATTTGAATTCAGCAGAGGAATTTCGGACAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS CCA 72 bp | GATGATCCCTGGGGCTGTCACCAGAAAGCGGGACCCTaGGGCGGCCAGCGCGACCGCGCACAAGCAGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: DDPWGCHQKAGP*GGQRDRAQAEK Trigger: CTTCTCTGCTTGTGCGCGGTCGCGCTGGCCGCCCCAGGGTCCCGCTTTCTGGTGACAGCCCCAGGGATCATC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS CCA 72 bp | CCCAATAGTCACATTTGCTCCGGGTCTGATGATCCCTaGGGCTGTCACCAGAAAGCGGGACCCTGGGGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: PNSHICSGSDDP*GCHQKAGPWGG Trigger: GCCGCCCCAGGGTCCCGCTTTCTGGTGACAGCCCCAGGGATCATCAGACCCGGAGCAAATGTGACTATTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS GCA 72 bp | GAGGCAGCCGTCACTGTGATGGGAATCTCTCCCAAGTaGGTGGGCTTGATGGGAAAAACAAGAGTGACCCCA | + |
|
Preference number: 6 (lower is better) Translates to: EAAVTVMGISPK*VGLMGKTRVTP Trigger: TGGGGTCACTCTTGTTTTTCCCATCAAGCCCACGCACTTGGGAGAGATTCCCATCACAGTGACGGCTGCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS TCA 72 bp | TACAATTGTCTGGGTGACAGCATCAGAGGCAGTGGGTaGGGCAGCCGTCACTGTGATGGGAATCTCTCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: YNCLGDSIRGSG*GSRHCDGNLSQ Trigger: TTGGGAGAGATTCCCATCACAGTGACGGCTGCCTCACCCACTGCCTCTGATGCTGTCACCCAGACAATTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS TCA 72 bp | CTCCGTCCGTGTGTGACTTGCAGTTGGTGTCTGGACTaGGGTAACATGAGGACAGCTTCACCTGGGTGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: LRPCVTCSWCLD*GNMRTASPGCC Trigger: ACAACACCCAGGTGAAGCTGTCCTCATGTTACCTCAGTCCAGACACCAACTGCAAGTCACACACGGACGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS CCA 72 bp | ATGGATCTGGGGATGCCGGGCCCTGTGACGGTCAGTTaGATATCTGTATTTTCCTTGTGCACAAGGGCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: MDLGMPGPVTVS*ISVFSLCTRAE Trigger: TTCAGCCCTTGTGCACAAGGAAAATACAGATATCCAACTGACCGTCACAGGGCCCGGCATCCCCAGATCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS CAA 90 bp | GGGATGCCGGGCCCTGTGACGGTCAGTTGGATATCTGTATTTTCCTaGTGCACAAGGGCTGAAAATTCAGATAATGCCTTCAGGGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: GMPGPVTVSWISVFS*CTRAENSDNAFRAT Trigger: TGTGGCCCTGAAGGCATTATCTGAATTTTCAGCCCTTGTGCACAAGGAAAATACAGATATCCAACTGACCGTCACAGGGCCCGGCATCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS TCA 72 bp | CACTGCTCAGAGGTAGTGCCGGAAGAACGAGAGTCTTaGAATGGCCTCTGTGAAAGACTCCTTCTGCTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: HCSEVVPEERES*NGLCERLLLLP Trigger: TGGAAGCAGAAGGAGTCTTTCACAGAGGCCATTTCAAGACTCTCGTTCTTCCGGCACTACCTCTGAGCAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS CAA 72 bp | GTCACTGTGATGGGAATCTCTCCCAAGTGCGTGGGCTaGATGGGAAAAACAAGAGTGACCCCATTATCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: VTVMGISPKCVG*MGKTRVTPLSL Trigger: CAGGGATAATGGGGTCACTCTTGTTTTTCCCATCAAGCCCACGCACTTGGGAGAGATTCCCATCACAGTGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS CAA 90 bp | CACAACAGTATCCTGAGTGGATACAAAACCTCCCAGGCTGTTTCTTaGCTGGATGAGCCACCTCATAACCGGGATTCCCTCAGACACATG | + |
|
Preference number: 6 (lower is better) Translates to: HNSILSGYKTSQAVS*LDEPPHNRDSLRHM Trigger: CATGTGTCTGAGGGAATCCCGGTTATGAGGTGGCTCATCCAGCAAAGAAACAGCCTGGGAGGTTTTGTATCCACTCAGGATACTGTTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS TCA 72 bp | AGTGCCGGAAGAACGAGAGTCTTGAAATGGCCTCTGTaGAAGACTCCTTCTGCTTCCAGGATGGATCTCGAT | + |
|
Preference number: 6 (lower is better) Translates to: SAGRTRVLKWPL*KTPSASRMDLD Trigger: ATCGAGATCCATCCTGGAAGCAGAAGGAGTCTTTCACAGAGGCCATTTCAAGACTCTCGTTCTTCCGGCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS TCA 72 bp | GAAAATGTCCACGGATGTCCTATAAGGCTTGAGATCTaGGCAGAGTGTGAGCACCCGAAACTTCACTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: ENVHGCPIRLEI*AECEHPKLHFL Trigger: CAGGAAGTGAAGTTTCGGGTGCTCACACTCTGCTCAGATCTCAAGCCTTATAGGACATCCGTGGACATTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS CAA 90 bp | AGGACAGCTTCACCTGGGTGTTGTAGCTTCGCACTGCCTGTCTCCTaGGTTCATAGTAGTCCATTACAGATACTGAACCATCTCGAATAT | + |
|
Preference number: 6 (lower is better) Translates to: RTASPGCCSFALPVS*VHSSPLQILNHLEY Trigger: ATATTCGAGATGGTTCAGTATCTGTAATGGACTACTATGAACCAAGGAGACAGGCAGTGCGAAGCTACAACACCCAGGTGAAGCTGTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS TCA 72 bp | AAGGTTCACTTCCATAAGGACCATGCCTGTCCTCTCTaGACCCAAGTGACTTGTGCACACATTCAGATTCAG | + |
|
Preference number: 6 (lower is better) Translates to: KVHFHKDHACPL*TQVTCAHIQIQ Trigger: CTGAATCTGAATGTGTGCACAAGTCACTTGGGTTCAGAGAGGACAGGCATGGTCCTTATGGAAGTGAACCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS CCA 72 bp | ACAGAGTACGGAAGATTCAGGAAAAGGAAAAACGGTTaGAAGGCTTGCAGCTCTGCTGGAACGGTTGTTAAC | + |
|
Preference number: 6 (lower is better) Translates to: TEYGRFRKRKNG*KACSSAGTVVN Trigger: GTTAACAACCGTTCCAGCAGAGCTGCAAGCCTTCCAACCGTTTTTCCTTTTCCTGAATCTTCCGTACTCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS CAA 72 bp | TCACCTGGGTGTTGTAGCTTCGCACTGCCTGTCTCCTaGGTTCATAGTAGTCCATTACAGATACTGAACCAT | + |
|
Preference number: 6 (lower is better) Translates to: SPGCCSFALPVS*VHSSPLQILNH Trigger: ATGGTTCAGTATCTGTAATGGACTACTATGAACCAAGGAGACAGGCAGTGCGAAGCTACAACACCCAGGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS TCA 72 bp | ATGGAGGAACCAAGGATATCTCCAATTGCTGTGATCTaGACTCTTTCACTGCCAATGACCGTATCAGGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: MEEPRISPIAVI*TLSLPMTVSGG Trigger: TCCTCCTGATACGGTCATTGGCAGTGAAAGAGTTCAGATCACAGCAATTGGAGATATCCTTGGTTCCTCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS TCA 72 bp | AATTCAGATAATGCCTTCAGGGCCACAACAGTATCCTaGGTGGATACAAAACCTCCCAGGCTGTTTCTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: NSDNAFRATTVS*VDTKPPRLFLC Trigger: GCAAAGAAACAGCCTGGGAGGTTTTGTATCCACTCAGGATACTGTTGTGGCCCTGAAGGCATTATCTGAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS GCA 72 bp | CACCCGAAACTTCACTTCCTGCTTCGGCTTGTAGAATaGCTTGTCTGTCTGAATGAGGACAGATATACTCTT | + |
|
Preference number: 6 (lower is better) Translates to: HPKLHFLLRLVE*LVCLNEDRYTL Trigger: AAGAGTATATCTGTCCTCATTCAGACAGACAAGGCATTCTACAAGCCGAAGCAGGAAGTGAAGTTTCGGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS CCA 72 bp | CTGTGTCGCAGAGATCCTGAGAGAGACCTTATCAGATaGCTTGACTGTAGGTTTACTCCAAAACAGCTTTAC | + |
|
Preference number: 6 (lower is better) Translates to: LCRRDPERDLIR*LDCRFTPKQLY Trigger: GTAAAGCTGTTTTGGAGTAAACCTACAGTCAAGCCATCTGATAAGGTCTCTCTCAGGATCTCTGCGACACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS CCA 72 bp | CAGGACAGAAGTCACAATATAGGCCGTAAGTGTTACTaGGCTTTTGGTGCCACCTTGAAGTTCACTGTGAAT | + |
|
Preference number: 6 (lower is better) Translates to: QDRSHNIGRKCY*AFGATLKFTVN Trigger: ATTCACAGTGAACTTCAAGGTGGCACCAAAAGCCCAGTAACACTTACGGCCTATATTGTGACTTCTGTCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS CAA 72 bp | GGCCCTGTGACGGTCAGTTGGATATCTGTATTTTCCTaGTGCACAAGGGCTGAAAATTCAGATAATGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: GPVTVSWISVFS*CTRAENSDNAF Trigger: GAAGGCATTATCTGAATTTTCAGCCCTTGTGCACAAGGAAAATACAGATATCCAACTGACCGTCACAGGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS TCA 72 bp | GTGACCAAATCATTTTCTATTTCTTCAGGAGTTAGTTaGTTGCCATCAGAGCGGCTGACCTTCACAGTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: VTKSFSISSGVS*LPSERLTFTVA Trigger: AGCCACTGTGAAGGTCAGCCGCTCTGATGGCAATCAACTAACTCCTGAAGAAATAGAAAATGATTTGGTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS GCA 72 bp | CCTGTGACGGTCAGTTGGATATCTGTATTTTCCTTGTaGACAAGGGCTGAAAATTCAGATAATGCCTTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PVTVSWISVFSL*TRAENSDNAFR Trigger: CCTGAAGGCATTATCTGAATTTTCAGCCCTTGTGCACAAGGAAAATACAGATATCCAACTGACCGTCACAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
||
| CDS CAA 72 bp | CATCCTCTGCAATATAATATGCGATTATACAGGCCTTaGGAGCCCAGGAAGCCTCTGGTGTTAAAGAGAAAG | + |
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Preference number: 6 (lower is better) Translates to: HPLQYNMRLYRP*EPRKPLVLKRK Trigger: CTTTCTCTTTAACACCAGAGGCTTCCTGGGCTCCAAAGGCCTGTATAATCGCATATTATATTGCAGAGGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS TCA 72 bp | CCTGCTTCGGCTTGTAGAATGCCTTGTCTGTCTGAATaGGGACAGATATACTCTTGCTCTCAAATGTTAAAC | + |
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Preference number: 6 (lower is better) Translates to: PASACRMPCLSE*GQIYSCSQMLN Trigger: GTTTAACATTTGAGAGCAAGAGTATATCTGTCCTCATTCAGACAGACAAGGCATTCTACAAGCCGAAGCAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS GCA 72 bp | ATGACCGTATCAGGAGGAAAGGAGAATCTCATAGATTaGTGCTTACTTTCTACGTTGCTATCTGTCAGATCC | + |
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Preference number: 6 (lower is better) Translates to: MTVSGGKENLID*CLLSTLLSVRS Trigger: GGATCTGACAGATAGCAACGTAGAAAGTAAGCAGCAATCTATGAGATTCTCCTTTCCTCCTGATACGGTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS GCA 72 bp | ACCGTATCAGGAGGAAAGGAGAATCTCATAGATTGCTaGTTACTTTCTACGTTGCTATCTGTCAGATCCAAT | + |
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Preference number: 6 (lower is better) Translates to: TVSGGKENLIDC*LLSTLLSVRSN Trigger: ATTGGATCTGACAGATAGCAACGTAGAAAGTAAGCAGCAATCTATGAGATTCTCCTTTCCTCCTGATACGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS CCA 72 bp | GACCCCACCTTTATATATTCATCTCTGGTTTTAAGCTaGATGTACGTCTTACTAGGAGAGGTGAACATACTG | + |
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Preference number: 6 (lower is better) Translates to: DPTFIYSSLVLS*MYVLLGEVNIL Trigger: CAGTATGTTCACCTCTCCTAGTAAGACGTACATCCAGCTTAAAACCAGAGATGAATATATAAAGGTGGGGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS CAA 72 bp | AATGACCGTATCAGGAGGAAAGGAGAATCTCATAGATaGCTGCTTACTTTCTACGTTGCTATCTGTCAGATC | + |
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Preference number: 6 (lower is better) Translates to: NDRIRRKGESHR*LLTFYVAICQI Trigger: GATCTGACAGATAGCAACGTAGAAAGTAAGCAGCAATCTATGAGATTCTCCTTTCCTCCTGATACGGTCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS CAA 90 bp | TCAGACTGTGTCGCAGAGATCCTGAGAGAGACCTTATCAGATGGCTaGACTGTAGGTTTACTCCAAAACAGCTTTACCTTATTTTCAAAA | + |
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Preference number: 6 (lower is better) Translates to: SDCVAEILRETLSDG*TVGLLQNSFTLFSK Trigger: TTTTGAAAATAAGGTAAAGCTGTTTTGGAGTAAACCTACAGTCAAGCCATCTGATAAGGTCTCTCTCAGGATCTCTGCGACACAGTCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS TCA 72 bp | TCTCAGGGTGGTTATTTTTCCGCTGGGTCACTACTGTaGCCAAATCATTTTCTATTTCTTCAGGAGTTAGTT | + |
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Preference number: 6 (lower is better) Translates to: SQGGYFSAGSLL*PNHFLFLQELV Trigger: AACTAACTCCTGAAGAAATAGAAAATGATTTGGTCACAGTAGTGACCCAGCGGAAAAATAACCACCCTGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS CAA 90 bp | GCCGGAAATGGACATGACTGGGAATTCAATCTTAATGATTCCATTTaGGGGGATAGTATAATTTACGGTCTGGATATAATCCATTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: AGNGHDWEFNLNDSI*GDSIIYGLDIIHFL Trigger: CAGGAAATGGATTATATCCAGACCGTAAATTATACTATCCCCCAAAATGGAATCATTAAGATTGAATTCCCAGTCATGTCCATTTCCGGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS CAA 90 bp | TCAGGAGGAAAGGAGAATCTCATAGATTGCTGCTTACTTTCTACGTaGCTATCTGTCAGATCCAATAAGACAGATTTCGAATACGACTTT | + |
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Preference number: 6 (lower is better) Translates to: SGGKENLIDCCLLST*LSVRSNKTDFEYDF Trigger: AAAGTCGTATTCGAAATCTGTCTTATTGGATCTGACAGATAGCAACGTAGAAAGTAAGCAGCAATCTATGAGATTCTCCTTTCCTCCTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS TCA 72 bp | ATGGACCAGTCACCAAATATTGGATTAGAGGATAGTTaGAAAGTTTTGGAAACGACTCCAAGATCACCTTTC | + |
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Preference number: 6 (lower is better) Translates to: MDQSPNIGLEDS*KVLETTPRSPF Trigger: GAAAGGTGATCTTGGAGTCGTTTCCAAAACTTTTCAACTATCCTCTAATCCAATATTTGGTGACTGGTCCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS TCA 72 bp | TTGATTTTCGGTAGATCTCCGTCTTTTAGAAGAACCTaGACCTTTCACGTTATAGTCAACATTAAGCTGGCA | + |
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Preference number: 6 (lower is better) Translates to: LIFGRSPSFRRT*TFHVIVNIKLA Trigger: TGCCAGCTTAATGTTGACTATAACGTGAAAGGTTCAGGTTCTTCTAAAAGACGGAGATCTACCGAAAATCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS CCA 72 bp | CATTATCCCTGGGAACTTGAACAGTCTTCCGGTATATaGTGCCATTGGTGTCATTTGAAGTCATTAAAATAT | + |
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Preference number: 6 (lower is better) Translates to: HYPWELEQSSGI*CHWCHLKSLKY Trigger: ATATTTTAATGACTTCAAATGACACCAATGGCACCATATACCGGAAGACTGTTCAAGTTCCCAGGGATAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS CAA 72 bp | GATATACTCTTGCTCTCAAATGTTAAACGTGTCCTGTaGGAGAATACGATCTCATTCTCTGATTGTCCGTTT | + |
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Preference number: 6 (lower is better) Translates to: DILLLSNVKRVL*ENTISFSDCPF Trigger: AAACGGACAATCAGAGAATGAGATCGTATTCTCCAACAGGACACGTTTAACATTTGAGAGCAAGAGTATATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS CAA 72 bp | AACGACTCCAAGATCACCTTTCTGAGAAAACCACTGTaGGATCACATTAGACTTCGGATCCTTAATGAAAAT | + |
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Preference number: 6 (lower is better) Translates to: NDSKITFLRKPL*DHIRLRILNEN Trigger: ATTTTCATTAAGGATCCGAAGTCTAATGTGATCCAACAGTGGTTTTCTCAGAAAGGTGATCTTGGAGTCGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS TCA 72 bp | TTCTGGAAAATTCTTCCTGACATGTACATTGTTAACTaGAGAAGCATCTTCAAAATCAACCAGGTTTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: FWKILPDMYIVN*RSIFKINQVCL Trigger: GAGGCAAACCTGGTTGATTTTGAAGATGCTTCTTCAGTTAACAATGTACATGTCAGGAAGAATTTTCCAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS CCA 72 bp | ATATACTCTTGCTCTCAAATGTTAAACGTGTCCTGTTaGAGAATACGATCTCATTCTCTGATTGTCCGTTTA | + |
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Preference number: 6 (lower is better) Translates to: IYSCSQMLNVSC*RIRSHSLIVRL Trigger: TAAACGGACAATCAGAGAATGAGATCGTATTCTCCAACAGGACACGTTTAACATTTGAGAGCAAGAGTATAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS CAA 72 bp | AAGGAGAATCTCATAGATTGCTGCTTACTTTCTACGTaGCTATCTGTCAGATCCAATAAGACAGATTTCGAA | + |
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Preference number: 6 (lower is better) Translates to: KENLIDCCLLST*LSVRSNKTDFE Trigger: TTCGAAATCTGTCTTATTGGATCTGACAGATAGCAACGTAGAAAGTAAGCAGCAATCTATGAGATTCTCCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS CAA 72 bp | GGACATGACTGGGAATTCAATCTTAATGATTCCATTTaGGGGGATAGTATAATTTACGGTCTGGATATAATC | + |
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Preference number: 6 (lower is better) Translates to: GHDWEFNLNDSI*GDSIIYGLDII Trigger: GATTATATCCAGACCGTAAATTATACTATCCCCCAAAATGGAATCATTAAGATTGAATTCCCAGTCATGTCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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| CDS TCA 72 bp | AAAACTGGGATTCATTTACAGAATCTAAATAAAGGTTaGGTTTCCCGTTATCATATTCCACTTTCTTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: KTGIHLQNLNKG*VSRYHIPLSSG Trigger: CCCTGAAGAAAGTGGAATATGATAACGGGAAACTCAACCTTTATTTAGATTCTGTAAATGAATCCCAGTTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093812.5 |
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