RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CD101 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000086564

Ensembl transcript IDs: ENSMUST00000147399.9, ENSMUST00000167086.2

Found 242 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR TCA 90 bp CCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGGTGCTCCTCCCTGCGGGGGCAGTaGTGGTGGCAGTGGCATTGG +
Preference number: 4 (lower is better)
Translates to: PPRSNPIPPRSFLQPRCSSLRGQ*WWQWHW
Trigger: CCAATGCCACTGCCACCATCACTGCCCCCGCAGGGA...GGAGCACCTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR TCA 90 bp CCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGGTGCTCCCGAAGGGGCAGACGATaGGGAAGTGGAGCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: PPRSNPIPPRSFLQPRCSRRGRR*GSGARA
Trigger: GGCCCTTGCTCCACTTCCTCATCGTCTGCCCCTTCG...GGAGCACCTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR TCA 90 bp CCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGGTGCTCCCAGAACACCTGGCCCTaGTCTGAGGGCTGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: PPRSNPIPPRSFLQPRCSQNTWP*SEGWSL
Trigger: CAAGCTCCAGCCCTCAGATCAGGGCCAGGTGTTCTG...GGAGCACCTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR TCA 90 bp TCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGGTGCTCCGAAGGGGCAGACGATaGGGAAGTGGAGCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: SSTLQPNPSTLLSPAQVLRRGRR*GSGARA
Trigger: GGCCCTTGCTCCACTTCCTCATCGTCTGCCCCTTCG...GAGCACCTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CCA 90 bp TCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGGTGCTCCCAGAGCCCGCTGGCTaGAACTGCCACGTTACCGAG +
Preference number: 4 (lower is better)
Translates to: SSTLQPNPSTLLSPAQVLPEPAG*NCHVTE
Trigger: CTCGGTAACGTGGCAGTTCCAGCCAGCGGGCTCTGG...GAGCACCTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CCA 90 bp CATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGGTGCCCAGAGCCCGCTGGCTaGAACTGCCACGTTACCGAG +
Preference number: 4 (lower is better)
Translates to: HPPRSNPIPPRSFLQPRCPEPAG*NCHVTE
Trigger: CTCGGTAACGTGGCAGTTCCAGCCAGCGGGCTCTGG...GCACCTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR TCA 90 bp TCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGGTGCACCTGGCCCTGATCTaGGGGCTGGAGCTTGCCTAC +
Preference number: 4 (lower is better)
Translates to: SSSTLQPNPSTLLSPAQVHLALI*GLELAY
Trigger: GTAGGCAAGCTCCAGCCCTCAGATCAGGGCCAGGTG...CACCTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR GCA 90 bp CCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGGTGCTCCGGCCACAAACCTGTCTaGATAGGAGGACCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: PPRSNPIPPRSFLQPRCSGHKPV*IGGPRG
Trigger: ACCCCTGGGTCCTCCTATGCAGACAGGTTTGTGGCC...GGAGCACCTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CCA 90 bp CATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGGTGCCACACTTCTTGCTGCTaGCTCCCTCAGCTGCACCCG +
Preference number: 4 (lower is better)
Translates to: HPPRSNPIPPRSFLQPRCHTSCC*LPQLHP
Trigger: CGGGTGCAGCTGAGGGAGCCAGCAGCAAGAAGTGTG...GCACCTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CCA 90 bp TCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGGTGGGCTCCAGAGCCCGCTaGCTGGAACTGCCACGTTAC +
Preference number: 4 (lower is better)
Translates to: SSSTLQPNPSTLLSPAQVGSRAR*LELPRY
Trigger: GTAACGTGGCAGTTCCAGCCAGCGGGCTCTGGAGCC...CACCTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR GCA 90 bp TCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGGTGCTCCACGGTCACACTTCTTaGTGCTGGCTCCCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: SSTLQPNPSTLLSPAQVLHGHTS*CWLPQL
Trigger: CAGCTGAGGGAGCCAGCAGCAAGAAGTGTGACCGTG...GAGCACCTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR GCA 90 bp CATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGGTGCCACGGTCACACTTCTTaGTGCTGGCTCCCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: HPPRSNPIPPRSFLQPRCHGHTS*CWLPQL
Trigger: CAGCTGAGGGAGCCAGCAGCAAGAAGTGTGACCGTG...GCACCTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CCA 90 bp CCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGGTGCTCCACCGGAAATCCTGCGTaGAAGGACCCTGATGACCAC +
Preference number: 4 (lower is better)
Translates to: PPRSNPIPPRSFLQPRCSTGNPA*KDPDDH
Trigger: GTGGTCATCAGGGTCCTTCCACGCAGGATTTCCGGT...GGAGCACCTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CCA 90 bp TCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGGTGCTCTCCGTGTTGGGTGTGTaGCACTCGTACTCGCCAGCA +
Preference number: 4 (lower is better)
Translates to: SSTLQPNPSTLLSPAQVLSVLGV*HSYSPA
Trigger: TGCTGGCGAGTACGAGTGCCACACACCCAACACGGA...GAGCACCTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CCA 90 bp TCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGGTGCACACTTCTTGCTGCTaGCTCCCTCAGCTGCACCCG +
Preference number: 4 (lower is better)
Translates to: SSSTLQPNPSTLLSPAQVHTSCC*LPQLHP
Trigger: CGGGTGCAGCTGAGGGAGCCAGCAGCAAGAAGTGTG...CACCTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CCA 90 bp CCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGGTGCTCCATCCACTTGCCTGGGTaGCCATGTTGCTGCCACTCA +
Preference number: 4 (lower is better)
Translates to: PPRSNPIPPRSFLQPRCSIHLPG*PCCCHS
Trigger: TGAGTGGCAGCAACATGGCCACCCAGGCAAGTGGAT...GGAGCACCTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR TCA 90 bp TCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGGTGCTCTGCCTACAGACAGCCTaGAGGAAGTGGCTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: SSTLQPNPSTLLSPAQVLCLQTA*RKWLQA
Trigger: AGCTTGGAGCCACTTCCTTCAGGCTGTCTGTAGGCA...GAGCACCTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR TCA 90 bp CATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGGTGCCCACGGAGAAGATCTTaGGAGAGAACGTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: HPPRSNPIPPRSFLQPRCPRRRS*ERTSGH
Trigger: GTGCCCAGACGTTCTCTCTCAAGATCTTCTCCGTGG...GCACCTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR GCA 90 bp CCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGGTGCTCCGAGAGATGGGTGTGTTaGACGGTGGCTTTGGTTGTC +
Preference number: 4 (lower is better)
Translates to: PPRSNPIPPRSFLQPRCSERWVC*TVALVV
Trigger: GACAACCAAAGCCACCGTGCAACACACCCATCTCTC...GGAGCACCTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR GCA 90 bp CATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGGTGCGCGGGTTACCATCTCTaGCAACAGCCAGGCAAACCA +
Preference number: 4 (lower is better)
Translates to: HPPRSNPIPPRSFLQPRCAGYHL*QQPGKP
Trigger: TGGTTTGCCTGGCTGTTGGCAGAGATGGTAACCCGC...GCACCTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR GCA 90 bp CATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGGTGCTACCATCTTGCCCCATaGCAGCCACAAACACGGGTG +
Preference number: 4 (lower is better)
Translates to: HPPRSNPIPPRSFLQPRCYHLAP*QPQTRV
Trigger: CACCCGTGTTTGTGGCTGGCATGGGGCAAGATGGTA...GCACCTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR GCA 90 bp CATTCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGAGTGGCATTGGCAACTaGGGCAGCAGTAGCCGTGGC +
Preference number: 4 (lower is better)
Translates to: HSSSTLQPNPSTLLSPAQSGIGN*GSSSRG
Trigger: GCCACGGCTACTGCTGCCGCAGTTGCCAATGCCACT...CTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR GCA 90 bp CATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGGTGCCCCTCTCTGCCATACTaGAGCAAGCCGTCATACTGC +
Preference number: 4 (lower is better)
Translates to: HPPRSNPIPPRSFLQPRCPSLPY*SKPSYC
Trigger: GCAGTATGACGGCTTGCTGCAGTATGGCAGAGAGGG...GCACCTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CCA 90 bp TCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGGTGTCCGTGTTGGGTGTGTaGCACTCGTACTCGCCAGCA +
Preference number: 4 (lower is better)
Translates to: SSSTLQPNPSTLLSPAQVSVLGV*HSYSPA
Trigger: TGCTGGCGAGTACGAGTGCCACACACCCAACACGGA...CACCTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CCA 90 bp CCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGGTGCTCCGGTGCCTACATCCTCTaGACCCACGGAGAAGATCTT +
Preference number: 4 (lower is better)
Translates to: PPRSNPIPPRSFLQPRCSGAYIL*THGEDL
Trigger: AAGATCTTCTCCGTGGGTCCAGAGGATGTAGGCACC...GGAGCACCTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CCA 90 bp CATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGGTGCTTGGAGACATGGACCTaGCTTCCTGTGGGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: HPPRSNPIPPRSFLQPRCLETWT*LPVGLS
Trigger: ACTCAGGCCCACAGGAAGCCAGGTCCATGTCTCCAA...GCACCTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR GCA 90 bp TCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGGTGTACCATCTTGCCCCATaGCAGCCACAAACACGGGTG +
Preference number: 4 (lower is better)
Translates to: SSSTLQPNPSTLLSPAQVYHLAP*QPQTRV
Trigger: CACCCGTGTTTGTGGCTGGCATGGGGCAAGATGGTA...CACCTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CCA 90 bp CATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGGTGCCCTGAATCCATTCTGTaGCCTCACAGAACACCTGGC +
Preference number: 4 (lower is better)
Translates to: HPPRSNPIPPRSFLQPRCPESIL*PHRTPG
Trigger: GCCAGGTGTTCTGTGAGGCCACAGAATGGATTCAGG...GCACCTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CCA 90 bp TCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGGTGACCTTCGTCTTCCTGTaGATCTGGGAGAGGACGTCC +
Preference number: 4 (lower is better)
Translates to: SSSTLQPNPSTLLSPAQVTFVFL*IWERTS
Trigger: GGACGTCCTCTCCCAGATCCACAGGAAGACGAAGGT...CACCTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CCA 90 bp TCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGGTGCTCGCTGTGACAACTTCCTaGCCTTCCGGTACAAGCAGA +
Preference number: 4 (lower is better)
Translates to: SSTLQPNPSTLLSPAQVLAVTTS*PSGTSR
Trigger: TCTGCTTGTACCGGAAGGCCAGGAAGTTGTCACAGC...GAGCACCTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR TCA 90 bp TCATTCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCACACCTTCCTTCTTACTaGGCGTCTGGGAGGGCATGG +
Preference number: 4 (lower is better)
Translates to: SFILHAPTQSLHAPFSSPHLPSY*ASGRAW
Trigger: CCATGCCCTCCCAGACGCTCAGTAAGAAGGAAGGTG...TGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR TCA 90 bp CATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGGTGCGTTCTGGAGTCTCTCTaGCACCCTGCATTCATAGGT +
Preference number: 4 (lower is better)
Translates to: HPPRSNPIPPRSFLQPRCVLESL*HPAFIG
Trigger: ACCTATGAATGCAGGGTGTCAGAGAGACTCCAGAAC...GCACCTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR GCA 90 bp CATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGGTGCTGGAGTTTTGAGATATaGAGCAGGACCGAGTCACCC +
Preference number: 4 (lower is better)
Translates to: HPPRSNPIPPRSFLQPRCWSFEI*SRTESP
Trigger: GGGTGACTCGGTCCTGCTGCATATCTCAAAACTCCA...GCACCTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR GCA 90 bp CATTCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGGCGGGTTACCATCTCTaGCAACAGCCAGGCAAACCA +
Preference number: 4 (lower is better)
Translates to: HSSSTLQPNPSTLLSPAQAGYHL*QQPGKP
Trigger: TGGTTTGCCTGGCTGTTGGCAGAGATGGTAACCCGC...CTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR GCA 90 bp CCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGGTGCTCCTGGCTGGGCCACTTGTaGATATGGAATCTCTGTCAT +
Preference number: 4 (lower is better)
Translates to: PPRSNPIPPRSFLQPRCSWLGHL*IWNLCH
Trigger: ATGACAGAGATTCCATATGCACAAGTGGCCCAGCCA...GGAGCACCTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CCA 90 bp AGAATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCATCAGGGAGGAGACCGTaGGCTCTGAGCGCAGCACCC +
Preference number: 4 (lower is better)
Translates to: RIHSSSTLQPNPSTLLSPSGRRP*ALSAAP
Trigger: GGGTGCTGCGCTCAGAGCCCACGGTCTCCTCCCTGA...TGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR TCA 90 bp AAACAGAATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCCTGCGGGGGCAGTaGTGGTGGCAGTGGCATTGG +
Preference number: 4 (lower is better)
Translates to: KQNSFILHAPTQSLHAPFSLRGQ*WWQWHW
Trigger: CCAATGCCACTGCCACCATCACTGCCCCCGCAGGGA...GAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATTCTGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR TCA 90 bp TCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGGTGCTCAGCTTCCTTCTGAAGTaGTGTCTTTCTCATGCCCAC +
Preference number: 4 (lower is better)
Translates to: SSTLQPNPSTLLSPAQVLSFLLK*CLSHAH
Trigger: GTGGGCATGAGAAAGACATCACTTCAGAAGGAAGCT...GAGCACCTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR TCA 90 bp CCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGGTGCTCCTCTCCAGCTTCCTTCTaGAGTGATGTCTTTCTCATG +
Preference number: 4 (lower is better)
Translates to: PPRSNPIPPRSFLQPRCSSPASF*SDVFLM
Trigger: CATGAGAAAGACATCACTTCAGAAGGAAGCTGGAGA...GGAGCACCTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR GCA 90 bp CATTCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGACTCACATCCCCAGCTaGCTTGCAGAGAAGGGTAAG +
Preference number: 4 (lower is better)
Translates to: HSSSTLQPNPSTLLSPAQTHIPS*LAEKGK
Trigger: CTTACCCTTCTCTGCAAGGCAGCTGGGGATGTGAGT...CTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR GCA 90 bp TCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGGTGGTCTCTCTGACACCCTaGATTCATAGGTACCGCTGT +
Preference number: 4 (lower is better)
Translates to: SSSTLQPNPSTLLSPAQVVSLTP*IHRYRC
Trigger: ACAGCGGTACCTATGAATGCAGGGTGTCAGAGAGAC...CACCTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CCA 90 bp CATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGGTGCCAGATCGGGACAAGATaGCACATTCTATCTGAGTGC +
Preference number: 4 (lower is better)
Translates to: HPPRSNPIPPRSFLQPRCQIGTR*HILSEC
Trigger: GCACTCAGATAGAATGTGCCATCTTGTCCCGATCTG...GCACCTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR TCA 90 bp CATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGGTGCATCCTCAGAGCTGTTTaGTCTGTCTGCTTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: HPPRSNPIPPRSFLQPRCILRAV*SVCFLV
Trigger: CACAAGAAAGCAGACAGATCAAACAGCTCTGAGGAT...GCACCTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR TCA 90 bp AATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCGGTGACTGCTTTCTCTaGAGTACCTGCCAGGAGCCC +
Preference number: 4 (lower is better)
Translates to: NSFILHAPTQSLHAPFSSGDCFL*STCQEP
Trigger: GGGCTCCTGGCAGGTACTTCAGAGAAAGCAGTCACC...GCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR TCA 90 bp TCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGGTGACGAAAGAAAGACTGTaGCACCTTCGTCTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: SSSTLQPNPSTLLSPAQVTKERL*HLRLPV
Trigger: CACAGGAAGACGAAGGTGTCACAGTCTTTCTTTCGT...CACCTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR GCA 90 bp TCATTCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGAGAGATGGGTGTGTTaGACGGTGGCTTTGGTTGTC +
Preference number: 4 (lower is better)
Translates to: SFILHAPTQSLHAPFSSPERWVC*TVALVV
Trigger: GACAACCAAAGCCACCGTGCAACACACCCATCTCTC...TGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR GCA 90 bp TCATTCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAACTCACATCCCCAGCTaGCTTGCAGAGAAGGGTAAG +
Preference number: 4 (lower is better)
Translates to: SFILHAPTQSLHAPFSSPTHIPS*LAEKGK
Trigger: CTTACCCTTCTCTGCAAGGCAGCTGGGGATGTGAGT...TGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR GCA 90 bp TCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGGTGGTGATGTCTTTCTCATaGCCACCCAGAGAGCCTTTT +
Preference number: 4 (lower is better)
Translates to: SSSTLQPNPSTLLSPAQVVMSFS*PPREPF
Trigger: AAAAGGCTCTCTGGGTGGGCATGAGAAAGACATCAC...CACCTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CCA 90 bp CATTCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGCCACCAGCATCAGTCTaGGCAATTTCCTTCCCATTG +
Preference number: 4 (lower is better)
Translates to: HSSSTLQPNPSTLLSPAQPPASV*AISFPL
Trigger: CAATGGGAAGGAAATTGCCCAGACTGATGCTGGTGG...CTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CCA 90 bp CTTGGCCAAGGTCTAAAACAGAATTCATTCATCCTCCACGCTCCAACCCAATCCTCAGGGAGGAGACCGTaGGCTCTGAGCGCAGCACCC +
Preference number: 4 (lower is better)
Translates to: LGQGLKQNSFILHAPTQSSGRRP*ALSAAP
Trigger: GGGTGCTGCGCTCAGAGCCCACGGTCTCCTCCCTGA...GGATTGGGTTGGAGCGTGGAGGATGAATGAATTCTGTTTTAGACCTTGGCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR TCA 90 bp CTTGGCCAAGGTCTAAAACAGAATTCATTCATCCTCCACGCTCCAACCCAATCCCACCTGGCCCTGATCTaGGGGCTGGAGCTTGCCTAC +
Preference number: 4 (lower is better)
Translates to: LGQGLKQNSFILHAPTQSHLALI*GLELAY
Trigger: GTAGGCAAGCTCCAGCCCTCAGATCAGGGCCAGGTG...GGATTGGGTTGGAGCGTGGAGGATGAATGAATTCTGTTTTAGACCTTGGCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR TCA 90 bp CATTCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGGTTTCATCTGGATCCTaGATCCATTCTGTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: HSSSTLQPNPSTLLSPAQVSSGS*IHSVAS
Trigger: TGAGGCCACAGAATGGATTCAGGATCCAGATGAAAC...CTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR TCA 90 bp TCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGGTGATCCTCAGAGCTGTTTaGTCTGTCTGCTTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: SSSTLQPNPSTLLSPAQVILRAV*SVCFLV
Trigger: CACAAGAAAGCAGACAGATCAAACAGCTCTGAGGAT...CACCTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR TCA 90 bp CAGAATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCCACCCGGTAGCCTGGTaGCTGCTTTCTCTGAAGTAC +
Preference number: 4 (lower is better)
Translates to: QNSFILHAPTQSLHAPFSHPVAW*LLSLKY
Trigger: GTACTTCAGAGAAAGCAGTCACCAGGCTACCGGGTG...GGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR TCA 90 bp TCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGGTGTCTCCAGCTTCCTTCTaGAGTGATGTCTTTCTCATG +
Preference number: 4 (lower is better)
Translates to: SSSTLQPNPSTLLSPAQVSPASF*SDVFLM
Trigger: CATGAGAAAGACATCACTTCAGAAGGAAGCTGGAGA...CACCTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR GCA 90 bp AAACAGAATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCCCGTGGCAGTTCCTCTaGCCCGGTACCATGTCACAG +
Preference number: 4 (lower is better)
Translates to: KQNSFILHAPTQSLHAPFPWQFL*PGTMSQ
Trigger: CTGTGACATGGTACCGGGGCAGAGGAACTGCCACGG...GAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATTCTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR GCA 90 bp CAGAATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCCCCTCTCTGCCATACTaGAGCAAGCCGTCATACTGC +
Preference number: 4 (lower is better)
Translates to: QNSFILHAPTQSLHAPFSPSLPY*SKPSYC
Trigger: GCAGTATGACGGCTTGCTGCAGTATGGCAGAGAGGG...GGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CCA 90 bp CAGAATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCACCTTCGTCTTCCTGTaGATCTGGGAGAGGACGTCC +
Preference number: 4 (lower is better)
Translates to: QNSFILHAPTQSLHAPFSTFVFL*IWERTS
Trigger: GGACGTCCTCTCCCAGATCCACAGGAAGACGAAGGT...GGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CCA 90 bp CATTCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGCTGTCCAATTCACTTTaGAGACATGGACCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: HSSSTLQPNPSTLLSPAQLSNSL*RHGPGF
Trigger: GAAGCCAGGTCCATGTCTCCAAAGTGAATTGGACAG...CTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR TCA 90 bp CATTCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGTACAGAGGGCCTTCTTaGATTTTTACTTCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: HSSSTLQPNPSTLLSPAQYRGPS*IFTSLW
Trigger: CCAGAGGGAAGTAAAAATTCAAGAAGGCCCTCTGTA...CTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR TCA 90 bp AATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCATTCGAATAAGCCGATaGAAGGCTCCAGAGCCCGCT +
Preference number: 4 (lower is better)
Translates to: NSFILHAPTQSLHAPFSSIRISR*KAPEPA
Trigger: AGCGGGCTCTGGAGCCTTTCATCGGCTTATTCGAAT...GCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR GCA 90 bp TCATTCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCATGGCTGGGCCACTTGTaGATATGGAATCTCTGTCAT +
Preference number: 4 (lower is better)
Translates to: SFILHAPTQSLHAPFSSPWLGHL*IWNLCH
Trigger: ATGACAGAGATTCCATATGCACAAGTGGCCCAGCCA...TGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR GCA 90 bp CCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGGTGCTCCGATTTTCAGATAGGATaGATTTGCAGAAACGGAAGA +
Preference number: 4 (lower is better)
Translates to: PPRSNPIPPRSFLQPRCSDFQIG*ICRNGR
Trigger: TCTTCCGTTTCTGCAAATGCATCCTATCTGAAAATC...GGAGCACCTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR GCA 90 bp CAAGGTCTAAAACAGAATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCACCCGTGGCAGTTCCTCTaGCCCGGTACCATGTCACAG +
Preference number: 4 (lower is better)
Translates to: QGLKQNSFILHAPTQSLHPWQFL*PGTMSQ
Trigger: CTGTGACATGGTACCGGGGCAGAGGAACTGCCACGG...GTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATTCTGTTTTAGACCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CCA 90 bp TCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGGTGAGTCCACGTTTCATCTaGATCCTGAATCCATTCTGT +
Preference number: 4 (lower is better)
Translates to: SSSTLQPNPSTLLSPAQVSPRFI*ILNPFC
Trigger: ACAGAATGGATTCAGGATCCAGATGAAACGTGGACT...CACCTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CCA 90 bp CATTCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGTTGAGAGAGAACGTCTaGGCACTTAACTTTGACACC +
Preference number: 4 (lower is better)
Translates to: HSSSTLQPNPSTLLSPAQLRENV*ALNFDT
Trigger: GGTGTCAAAGTTAAGTGCCCAGACGTTCTCTCTCAA...CTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR TCA 90 bp AATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCTTGGACCTGACTGCTTaGGTTCACGCTCAGTTTGCT +
Preference number: 4 (lower is better)
Translates to: NSFILHAPTQSLHAPFSSLDLTA*VHAQFA
Trigger: AGCAAACTGAGCGTGAACTCAAGCAGTCAGGTCCAA...GCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR GCA 90 bp CTTGGCCAAGGTCTAAAACAGAATTCATTCATCCTCCACGCTCCAACCCAATCCTCCTGCTCCCCTCTCTaGCATACTGCAGCAAGCCGT +
Preference number: 4 (lower is better)
Translates to: LGQGLKQNSFILHAPTQSSCSPL*HTAASR
Trigger: ACGGCTTGCTGCAGTATGGCAGAGAGGGGAGCAGGA...GGATTGGGTTGGAGCGTGGAGGATGAATGAATTCTGTTTTAGACCTTGGCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CCA 90 bp AGAATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCACCTGAATCCATTCTGTaGCCTCACAGAACACCTGGC +
Preference number: 4 (lower is better)
Translates to: RIHSSSTLQPNPSTLLSPPESIL*PHRTPG
Trigger: GCCAGGTGTTCTGTGAGGCCACAGAATGGATTCAGG...TGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CCA 90 bp AAACAGAATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCCCTTTGGCCTGGTTCTaGAGTCTCTCTGACACCCTG +
Preference number: 4 (lower is better)
Translates to: KQNSFILHAPTQSLHAPFPLAWF*SLSDTL
Trigger: CAGGGTGTCAGAGAGACTCCAGAACCAGGCCAAAGG...GAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATTCTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CCA 90 bp CAGAATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCTGCAAACCTTTGGCCTaGTTCTGGAGTCTCTCTGAC +
Preference number: 4 (lower is better)
Translates to: QNSFILHAPTQSLHAPFSCKPLA*FWSLSD
Trigger: GTCAGAGAGACTCCAGAACCAGGCCAAAGGTTTGCA...GGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CCA 90 bp AAACAGAATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTTGGAGACATGGACCTaGCTTCCTGTGGGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: KQNSFILHAPTQSLHAPFLETWT*LPVGLS
Trigger: ACTCAGGCCCACAGGAAGCCAGGTCCATGTCTCCAA...GAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATTCTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CCA 90 bp AGAATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCTGTGACAACTTCCTaGCCTTCCGGTACAAGCAGA +
Preference number: 4 (lower is better)
Translates to: RIHSSSTLQPNPSTLLSPAVTTS*PSGTSR
Trigger: TCTGCTTGTACCGGAAGGCCAGGAAGTTGTCACAGC...TGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR TCA 90 bp AAACAGAATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTGGTTGTCTCACAGGTaGGTTCCAAGGGCTCACCTT +
Preference number: 4 (lower is better)
Translates to: KQNSFILHAPTQSLHAPFWLSHR*VPRAHL
Trigger: AAGGTGAGCCCTTGGAACTCACCTGTGAGACAACCA...GAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATTCTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR TCA 90 bp AAACAGAATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCGCATCAGGTACCAGGTaGGAGAGAGATGGGTGTGTT +
Preference number: 4 (lower is better)
Translates to: KQNSFILHAPTQSLHAPFASGTR*ERDGCV
Trigger: AACACACCCATCTCTCTCTCACCTGGTACCTGATGC...GAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATTCTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR TCA 90 bp CTTGGCCAAGGTCTAAAACAGAATTCATTCATCCTCCACGCTCCAACCCAATCCTGCCTACAGACAGCCTaGAGGAAGTGGCTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: LGQGLKQNSFILHAPTQSCLQTA*RKWLQA
Trigger: AGCTTGGAGCCACTTCCTTCAGGCTGTCTGTAGGCA...GGATTGGGTTGGAGCGTGGAGGATGAATGAATTCTGTTTTAGACCTTGGCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR TCA 90 bp CCAAGGTCTAAAACAGAATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCACCACGGAGAAGATCTTaGGAGAGAACGTCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: PRSKTEFIHPPRSNPIPPPRRRS*ERTSGH
Trigger: GTGCCCAGACGTTCTCTCTCAAGATCTTCTCCGTGG...TGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATTCTGTTTTAGACCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR TCA 90 bp CAAGGTCTAAAACAGAATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCACCACCCGGTAGCCTGGTaGCTGCTTTCTCTGAAGTAC +
Preference number: 4 (lower is better)
Translates to: QGLKQNSFILHAPTQSLHHPVAW*LLSLKY
Trigger: GTACTTCAGAGAAAGCAGTCACCAGGCTACCGGGTG...GTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATTCTGTTTTAGACCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR TCA 90 bp CTTGGCCAAGGTCTAAAACAGAATTCATTCATCCTCCACGCTCCAACCCAATCCAGGTACCGCTGTCTGTaGCCATGGCAGAGGCAATCT +
Preference number: 4 (lower is better)
Translates to: LGQGLKQNSFILHAPTQSRYRCL*PWQRQS
Trigger: AGATTGCCTCTGCCATGGTCACAGACAGCGGTACCT...GGATTGGGTTGGAGCGTGGAGGATGAATGAATTCTGTTTTAGACCTTGGCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR TCA 90 bp AGAATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGTTCTGGAGTCTCTCTaGCACCCTGCATTCATAGGT +
Preference number: 4 (lower is better)
Translates to: RIHSSSTLQPNPSTLLSPVLESL*HPAFIG
Trigger: ACCTATGAATGCAGGGTGTCAGAGAGACTCCAGAAC...TGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR TCA 90 bp AATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCACGAAAGAAAGACTGTaGCACCTTCGTCTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: NSFILHAPTQSLHAPFSSTKERL*HLRLPV
Trigger: CACAGGAAGACGAAGGTGTCACAGTCTTTCTTTCGT...GCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR GCA 90 bp AGAATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGTCTCTCTGACACCCTaGATTCATAGGTACCGCTGT +
Preference number: 4 (lower is better)
Translates to: RIHSSSTLQPNPSTLLSPVSLTP*IHRYRC
Trigger: ACAGCGGTACCTATGAATGCAGGGTGTCAGAGAGAC...TGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR GCA 90 bp CAAGGTCTAAAACAGAATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCACATAGGGAAGCTGTGCTaGCTGAGCCATCTAGGCTGC +
Preference number: 4 (lower is better)
Translates to: QGLKQNSFILHAPTQSLHIGKLC*LSHLGC
Trigger: GCAGCCTAGATGGCTCAGGCAGCACAGCTTCCCTAT...GTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATTCTGTTTTAGACCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CCA 90 bp ATCCCTTCTGGTCCCTTGGTAACTTGGCCAAGGTCTAAAACAGAATTCATTCATGGCTCCAGAGCCCGCTaGCTGGAACTGCCACGTTAC +
Preference number: 4 (lower is better)
Translates to: IPSGPLVTWPRSKTEFIHGSRAR*LELPRY
Trigger: GTAACGTGGCAGTTCCAGCCAGCGGGCTCTGGAGCC...ATGAATGAATTCTGTTTTAGACCTTGGCCAAGTTACCAAGGGACCAGAAGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CCA 90 bp TCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGGTGCTCTTTACAACACTGCTTTaGTCCATTTCTAGGATTTTC +
Preference number: 4 (lower is better)
Translates to: SSTLQPNPSTLLSPAQVLFTTLL*SISRIF
Trigger: GAAAATCCTAGAAATGGACCAAAGCAGTGTTGTAAA...GAGCACCTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR TCA 90 bp CAGAATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCTACAGAGGGCCTTCTTaGATTTTTACTTCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: QNSFILHAPTQSLHAPFSYRGPS*IFTSLW
Trigger: CCAGAGGGAAGTAAAAATTCAAGAAGGCCCTCTGTA...GGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR TCA 90 bp CAAGGTCTAAAACAGAATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCACGCATCAGGTACCAGGTaGGAGAGAGATGGGTGTGTT +
Preference number: 4 (lower is better)
Translates to: QGLKQNSFILHAPTQSLHASGTR*ERDGCV
Trigger: AACACACCCATCTCTCTCTCACCTGGTACCTGATGC...GTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATTCTGTTTTAGACCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR TCA 90 bp CAAGGTCTAAAACAGAATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCACATTCGAATAAGCCGATaGAAGGCTCCAGAGCCCGCT +
Preference number: 4 (lower is better)
Translates to: QGLKQNSFILHAPTQSLHIRISR*KAPEPA
Trigger: AGCGGGCTCTGGAGCCTTTCATCGGCTTATTCGAAT...GTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATTCTGTTTTAGACCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR TCA 90 bp CTTGGCCAAGGTCTAAAACAGAATTCATTCATCCTCCACGCTCCAACCCAATCCTCTGAGTGCTGGAGCTaGTGGATAGCTCTTGGACCT +
Preference number: 4 (lower is better)
Translates to: LGQGLKQNSFILHAPTQSSECWS*WIALGP
Trigger: AGGTCCAAGAGCTATCCATCAGCTCCAGCACTCAGA...GGATTGGGTTGGAGCGTGGAGGATGAATGAATTCTGTTTTAGACCTTGGCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR GCA 90 bp ATGGTTAACAATCTATGTCCATGGCACATCCCTTCTGGTCCCTTGGTAACTTGGATAGGGAAGCTGTGCTaGCTGAGCCATCTAGGCTGC +
Preference number: 4 (lower is better)
Translates to: MVNNLCPWHIPSGPLVTWIGKLC*LSHLGC
Trigger: GCAGCCTAGATGGCTCAGGCAGCACAGCTTCCCTAT...CCAAGTTACCAAGGGACCAGAAGGGATGTGCCATGGACATAGATTGTTAACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147399.9
CDS-3UTR GCA 90 bp AAACAGAATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCATTTCCACCCGATaGAGCTTCAGGACGAAGTCT +
Preference number: 4 (lower is better)
Translates to: KQNSFILHAPTQSLHAPFSISTR*SFRTKS
Trigger: AGACTTCGTCCTGAAGCTGCATCGGGTGGAAATGGA...GAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATTCTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR GCA 90 bp AGAATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGTGATGTCTTTCTCATaGCCACCCAGAGAGCCTTTT +
Preference number: 4 (lower is better)
Translates to: RIHSSSTLQPNPSTLLSPVMSFS*PPREPF
Trigger: AAAAGGCTCTCTGGGTGGGCATGAGAAAGACATCAC...TGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CCA 90 bp ATGGTTAACAATCTATGTCCATGGCACATCCCTTCTGGTCCCTTGGTAACTTGGACCGGAAATCCTGCGTaGAAGGACCCTGATGACCAC +
Preference number: 4 (lower is better)
Translates to: MVNNLCPWHIPSGPLVTWTGNPA*KDPDDH
Trigger: GTGGTCATCAGGGTCCTTCCACGCAGGATTTCCGGT...CCAAGTTACCAAGGGACCAGAAGGGATGTGCCATGGACATAGATTGTTAACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147399.9
CDS-3UTR CCA 90 bp CAAGGTCTAAAACAGAATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCACGGTGCCTACATCCTCTaGACCCACGGAGAAGATCTT +
Preference number: 4 (lower is better)
Translates to: QGLKQNSFILHAPTQSLHGAYIL*THGEDL
Trigger: AAGATCTTCTCCGTGGGTCCAGAGGATGTAGGCACC...GTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATTCTGTTTTAGACCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CCA 90 bp ATGGTTAACAATCTATGTCCATGGCACATCCCTTCTGGTCCCTTGGTAACTTGGCCTTTGGCCTGGTTCTaGAGTCTCTCTGACACCCTG +
Preference number: 4 (lower is better)
Translates to: MVNNLCPWHIPSGPLVTWPLAWF*SLSDTL
Trigger: CAGGGTGTCAGAGAGACTCCAGAACCAGGCCAAAGG...CCAAGTTACCAAGGGACCAGAAGGGATGTGCCATGGACATAGATTGTTAACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147399.9
CDS-3UTR CCA 90 bp AAACAGAATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTGCAAACCTTTGGCCTaGTTCTGGAGTCTCTCTGAC +
Preference number: 4 (lower is better)
Translates to: KQNSFILHAPTQSLHAPFCKPLA*FWSLSD
Trigger: GTCAGAGAGACTCCAGAACCAGGCCAAAGGTTTGCA...GAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATTCTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CCA 90 bp AGAATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCATCAACGGTGCCATTGTaGGCAATTCGAATAAGCCGA +
Preference number: 4 (lower is better)
Translates to: RIHSSSTLQPNPSTLLSPSTVPL*AIRISR
Trigger: TCGGCTTATTCGAATTGCCCACAATGGCACCGTTGA...TGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CCA 90 bp ATGGTTAACAATCTATGTCCATGGCACATCCCTTCTGGTCCCTTGGTAACTTGGATCCACTTGCCTGGGTaGCCATGTTGCTGCCACTCA +
Preference number: 4 (lower is better)
Translates to: MVNNLCPWHIPSGPLVTWIHLPG*PCCCHS
Trigger: TGAGTGGCAGCAACATGGCCACCCAGGCAAGTGGAT...CCAAGTTACCAAGGGACCAGAAGGGATGTGCCATGGACATAGATTGTTAACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147399.9
CDS-3UTR TCA 90 bp AAACAGAATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCAGCTTCCTTCTGAAGTaGTGTCTTTCTCATGCCCAC +
Preference number: 4 (lower is better)
Translates to: KQNSFILHAPTQSLHAPFSFLLK*CLSHAH
Trigger: GTGGGCATGAGAAAGACATCACTTCAGAAGGAAGCT...GAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATTCTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CCA 90 bp CCAAGGTCTAAAACAGAATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCACCACCAGCATCAGTCTaGGCAATTTCCTTCCCATTG +
Preference number: 4 (lower is better)
Translates to: PRSKTEFIHPPRSNPIPPPPASV*AISFPL
Trigger: CAATGGGAAGGAAATTGCCCAGACTGATGCTGGTGG...TGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATTCTGTTTTAGACCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR TCA 90 bp AAACAGAATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTTTCATCTGGAGTTTTaGGATATGCAGCAGGACCGA +
Preference number: 4 (lower is better)
Translates to: KQNSFILHAPTQSLHAPFFHLEF*DMQQDR
Trigger: TCGGTCCTGCTGCATATCTCAAAACTCCAGATGAAA...GAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATTCTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR TCA 90 bp ATCCCTTCTGGTCCCTTGGTAACTTGGCCAAGGTCTAAAACAGAATTCATTCATAGGTACCGCTGTCTGTaGCCATGGCAGAGGCAATCT +
Preference number: 4 (lower is better)
Translates to: IPSGPLVTWPRSKTEFIHRYRCL*PWQRQS
Trigger: AGATTGCCTCTGCCATGGTCACAGACAGCGGTACCT...ATGAATGAATTCTGTTTTAGACCTTGGCCAAGTTACCAAGGGACCAGAAGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR TCA 90 bp CAAGGTCTAAAACAGAATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCACAGCATCACTTGTGGCTaGCGGCTCATCAGATTAACT +
Preference number: 4 (lower is better)
Translates to: QGLKQNSFILHAPTQSLHSITCG*RLIRLT
Trigger: AGTTAATCTGATGAGCCGTCAGCCACAAGTGATGCT...GTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATTCTGTTTTAGACCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR TCA 90 bp CTTGGCCAAGGTCTAAAACAGAATTCATTCATCCTCCACGCTCCAACCCAATCCAGCATCACTTGTGGCTaGCGGCTCATCAGATTAACT +
Preference number: 4 (lower is better)
Translates to: LGQGLKQNSFILHAPTQSSITCG*RLIRLT
Trigger: AGTTAATCTGATGAGCCGTCAGCCACAAGTGATGCT...GGATTGGGTTGGAGCGTGGAGGATGAATGAATTCTGTTTTAGACCTTGGCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR GCA 90 bp ATGGTTAACAATCTATGTCCATGGCACATCCCTTCTGGTCCCTTGGTAACTTGGTGGAGTTTTGAGATATaGAGCAGGACCGAGTCACCC +
Preference number: 4 (lower is better)
Translates to: MVNNLCPWHIPSGPLVTWWSFEI*SRTESP
Trigger: GGGTGACTCGGTCCTGCTGCATATCTCAAAACTCCA...CCAAGTTACCAAGGGACCAGAAGGGATGTGCCATGGACATAGATTGTTAACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147399.9
CDS-3UTR CCA 90 bp CCAAGGTCTAAAACAGAATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCATCAACGGTGCCATTGTaGGCAATTCGAATAAGCCGA +
Preference number: 4 (lower is better)
Translates to: PRSKTEFIHPPRSNPIPPSTVPL*AIRISR
Trigger: TCGGCTTATTCGAATTGCCCACAATGGCACCGTTGA...TGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATTCTGTTTTAGACCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CCA 90 bp CAAGGTCTAAAACAGAATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCACCAGATCGGGACAAGATaGCACATTCTATCTGAGTGC +
Preference number: 4 (lower is better)
Translates to: QGLKQNSFILHAPTQSLHQIGTR*HILSEC
Trigger: GCACTCAGATAGAATGTGCCATCTTGTCCCGATCTG...GTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATTCTGTTTTAGACCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CCA 90 bp TCATTCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCATTTACAACACTGCTTTaGTCCATTTCTAGGATTTTC +
Preference number: 4 (lower is better)
Translates to: SFILHAPTQSLHAPFSSPFTTLL*SISRIF
Trigger: GAAAATCCTAGAAATGGACCAAAGCAGTGTTGTAAA...TGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CCA 90 bp CCAAGGTCTAAAACAGAATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCACTGTCCAATTCACTTTaGAGACATGGACCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: PRSKTEFIHPPRSNPIPPLSNSL*RHGPGF
Trigger: GAAGCCAGGTCCATGTCTCCAAAGTGAATTGGACAG...TGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATTCTGTTTTAGACCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR TCA 90 bp ATCCCTTCTGGTCCCTTGGTAACTTGGCCAAGGTCTAAAACAGAATTCATTCATTGGTTGTCTCACAGGTaGGTTCCAAGGGCTCACCTT +
Preference number: 4 (lower is better)
Translates to: IPSGPLVTWPRSKTEFIHWLSHR*VPRAHL
Trigger: AAGGTGAGCCCTTGGAACTCACCTGTGAGACAACCA...ATGAATGAATTCTGTTTTAGACCTTGGCCAAGTTACCAAGGGACCAGAAGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR TCA 90 bp ATGGTTAACAATCTATGTCCATGGCACATCCCTTCTGGTCCCTTGGTAACTTGGGTTTCATCTGGATCCTaGATCCATTCTGTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: MVNNLCPWHIPSGPLVTWVSSGS*IHSVAS
Trigger: TGAGGCCACAGAATGGATTCAGGATCCAGATGAAAC...CCAAGTTACCAAGGGACCAGAAGGGATGTGCCATGGACATAGATTGTTAACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147399.9
CDS-3UTR TCA 90 bp ATCCCTTCTGGTCCCTTGGTAACTTGGCCAAGGTCTAAAACAGAATTCATTCATTCTGAGTGCTGGAGCTaGTGGATAGCTCTTGGACCT +
Preference number: 4 (lower is better)
Translates to: IPSGPLVTWPRSKTEFIHSECWS*WIALGP
Trigger: AGGTCCAAGAGCTATCCATCAGCTCCAGCACTCAGA...ATGAATGAATTCTGTTTTAGACCTTGGCCAAGTTACCAAGGGACCAGAAGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR GCA 90 bp ATCCCTTCTGGTCCCTTGGTAACTTGGCCAAGGTCTAAAACAGAATTCATTCATTGCACAGTACCATCTTaGCCCATGCCAGCCACAAAC +
Preference number: 4 (lower is better)
Translates to: IPSGPLVTWPRSKTEFIHCTVPS*PMPATN
Trigger: GTTTGTGGCTGGCATGGGGCAAGATGGTACTGTGCA...ATGAATGAATTCTGTTTTAGACCTTGGCCAAGTTACCAAGGGACCAGAAGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CCA 90 bp AAACAGAATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCGGCCACTTGTGCATATaGAATCTCTGTCATAAACCT +
Preference number: 4 (lower is better)
Translates to: KQNSFILHAPTQSLHAPFGHLCI*NLCHKP
Trigger: AGGTTTATGACAGAGATTCCATATGCACAAGTGGCC...GAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATTCTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR TCA 90 bp ATGGTTAACAATCTATGTCCATGGCACATCCCTTCTGGTCCCTTGGTAACTTGGTTTCATCTGGAGTTTTaGGATATGCAGCAGGACCGA +
Preference number: 4 (lower is better)
Translates to: MVNNLCPWHIPSGPLVTWFHLEF*DMQQDR
Trigger: TCGGTCCTGCTGCATATCTCAAAACTCCAGATGAAA...CCAAGTTACCAAGGGACCAGAAGGGATGTGCCATGGACATAGATTGTTAACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147399.9
CDS-3UTR TCA 90 bp CCAAGGTCTAAAACAGAATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCACTGTCTGCTTTCTTGTaGTCAAAGTCCACGTTTCAT +
Preference number: 4 (lower is better)
Translates to: PRSKTEFIHPPRSNPIPPLSAFL*SKSTFH
Trigger: ATGAAACGTGGACTTTGATCACAAGAAAGCAGACAG...TGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATTCTGTTTTAGACCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CCA 90 bp CAAGGTCTAAAACAGAATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCACAGTCCACGTTTCATCTaGATCCTGAATCCATTCTGT +
Preference number: 4 (lower is better)
Translates to: QGLKQNSFILHAPTQSLHSPRFI*ILNPFC
Trigger: ACAGAATGGATTCAGGATCCAGATGAAACGTGGACT...GTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATTCTGTTTTAGACCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CCA 90 bp CTTGGCCAAGGTCTAAAACAGAATTCATTCATCCTCCACGCTCCAACCCAATCCGGCCACTTGTGCATATaGAATCTCTGTCATAAACCT +
Preference number: 4 (lower is better)
Translates to: LGQGLKQNSFILHAPTQSGHLCI*NLCHKP
Trigger: AGGTTTATGACAGAGATTCCATATGCACAAGTGGCC...GGATTGGGTTGGAGCGTGGAGGATGAATGAATTCTGTTTTAGACCTTGGCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR TCA 90 bp CCAAGGTCTAAAACAGAATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCACAATTCTGTGAGTCCTaGAGTCTTTCTTTCAAGCTT +
Preference number: 4 (lower is better)
Translates to: PRSKTEFIHPPRSNPIPPQFCES*SLSFKL
Trigger: AAGCTTGAAAGAAAGACTTCAGGACTCACAGAATTG...TGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATTCTGTTTTAGACCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR GCA 90 bp CTTGGCCAAGGTCTAAAACAGAATTCATTCATCCTCCACGCTCCAACCCAATCCGATTTTCAGATAGGATaGATTTGCAGAAACGGAAGA +
Preference number: 4 (lower is better)
Translates to: LGQGLKQNSFILHAPTQSDFQIG*ICRNGR
Trigger: TCTTCCGTTTCTGCAAATGCATCCTATCTGAAAATC...GGATTGGGTTGGAGCGTGGAGGATGAATGAATTCTGTTTTAGACCTTGGCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
3UTR CAA 72 bp AACAATCTATGTCCATGGCACATCCCTTCTGGTCCCTaGGTAACTTGGCCAAGGTCTAAAACAGAATTCATT +
Preference number: 4 (lower is better)
Translates to: NNLCPWHIPSGP*VTWPRSKTEFI
Trigger: AATGAATTCTGTTTTAGACCTTGGCCAAGTTACCAAGGGACCAGAAGGGATGTGCCATGGACATAGATTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR TCA 90 bp ATCCCTTCTGGTCCCTTGGTAACTTGGCCAAGGTCTAAAACAGAATTCATTCATCTGTCTGCTTTCTTGTaGTCAAAGTCCACGTTTCAT +
Preference number: 4 (lower is better)
Translates to: IPSGPLVTWPRSKTEFIHLSAFL*SKSTFH
Trigger: ATGAAACGTGGACTTTGATCACAAGAAAGCAGACAG...ATGAATGAATTCTGTTTTAGACCTTGGCCAAGTTACCAAGGGACCAGAAGGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR GCA 90 bp CAAGGTCTAAAACAGAATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCACCATATTTTACAACACTaGTTTGGTCCATTTCTAGGA +
Preference number: 4 (lower is better)
Translates to: QGLKQNSFILHAPTQSLHHILQH*FGPFLG
Trigger: TCCTAGAAATGGACCAAAGCAGTGTTGTAAAATATG...GTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATTCTGTTTTAGACCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR TCA 90 bp ATCCCTTCTGGTCCCTTGGTAACTTGGCCAAGGTCTAAAACAGAATTCATTCATCAATTCTGTGAGTCCTaGAGTCTTTCTTTCAAGCTT +
Preference number: 4 (lower is better)
Translates to: IPSGPLVTWPRSKTEFIHQFCES*SLSFKL
Trigger: AAGCTTGAAAGAAAGACTTCAGGACTCACAGAATTG...ATGAATGAATTCTGTTTTAGACCTTGGCCAAGTTACCAAGGGACCAGAAGGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CCA 90 bp ATCCCTTCTGGTCCCTTGGTAACTTGGCCAAGGTCTAAAACAGAATTCATTCATTCAATACAAAGTCCTTaGAGAGAGAAACGATCTCAG +
Preference number: 4 (lower is better)
Translates to: IPSGPLVTWPRSKTEFIHSIQSP*REKRSQ
Trigger: CTGAGATCGTTTCTCTCTCCAAGGACTTTGTATTGA...ATGAATGAATTCTGTTTTAGACCTTGGCCAAGTTACCAAGGGACCAGAAGGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS GCA 90 bp TGCGCAGGGCCCGGAGAAGAGACTCCCAGCTGCACAGTACCATCTTaGCCCATGCCAGCCACAAACACGGGTGTGGACTGGTCCTGTGGG +
Preference number: 5 (lower is better)
Translates to: CAGPGEETPSCTVPS*PMPATNTGVDWSCG
Trigger: CCCACAGGACCAGTCCACACCCGTGTTTGTGGCTGGCATGGGGCAAGATGGTACTGTGCAGCTGGGAGTCTCTTCTCCGGGCCCTGCGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS GCA 90 bp TTGACTCCCTGCGGGGGCAGTGATGGTGGCAGTGGCATTGGCAACTaGGGCAGCAGTAGCCGTGGCAGTTCCTCTGCCCCGGTACCATGT +
Preference number: 5 (lower is better)
Translates to: LTPCGGSDGGSGIGN*GSSSRGSSSAPVPC
Trigger: ACATGGTACCGGGGCAGAGGAACTGCCACGGCTACTGCTGCCGCAGTTGCCAATGCCACTGCCACCATCACTGCCCCCGCAGGGAGTCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS GCA 90 bp GAGGAGACCGTGGGCTCTGAGCGCAGCACCCTGAGCACCATTCGTTaGGACTCGCCTGAGGCTTGGTTGATCCACTTGCCTGGGTGGCCA +
Preference number: 5 (lower is better)
Translates to: EETVGSERSTLSTIR*DSPEAWLIHLPGWP
Trigger: TGGCCACCCAGGCAAGTGGATCAACCAAGCCTCAGGCGAGTCGCAACGAATGGTGCTCAGGGTGCTGCGCTCAGAGCCCACGGTCTCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS TCA 90 bp CAGAGCCCGCTGGCTGGAACTGCCACGTTACCGAGAACGGCAGCTTaGGATCCGAGTAGTTGGCCCTCACTACACAGGACAGGTGGAAGG +
Preference number: 5 (lower is better)
Translates to: QSPLAGTATLPRTAA*DPSSWPSLHRTGGR
Trigger: CCTTCCACCTGTCCTGTGTAGTGAGGGCCAACTACTCGGATCTCAAGCTGCCGTTCTCGGTAACGTGGCAGTTCCAGCCAGCGGGCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS GCA 90 bp GCCTTGCAGAGAAGGGTAAGCGTCTCTCCTTCCCACACAGTACGCTaGTCGGCAGACACGGTCACACTTCTTGCTGCTGGCTCCCTCAGC +
Preference number: 5 (lower is better)
Translates to: ALQRRVSVSPSHTVR*SADTVTLLAAGSLS
Trigger: GCTGAGGGAGCCAGCAGCAAGAAGTGTGACCGTGTCTGCCGAGCAGCGTACTGTGTGGGAAGGAGAGACGCTTACCCTTCTCTGCAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS GCA 90 bp GGACGAAGTCTGTGGGAGAGGATCGGTAGCAGTGCTGGAGCCTCCTaGTCCCCTCTCTGCCATACTGCAGCAAGCCGTCATACTGCAGGT +
Preference number: 5 (lower is better)
Translates to: GRSLWERIGSSAGAS*SPLCHTAASRHTAG
Trigger: ACCTGCAGTATGACGGCTTGCTGCAGTATGGCAGAGAGGGGAGCAGGAGGCTCCAGCACTGCTACCGATCCTCTCCCACAGACTTCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS CCA 90 bp CAGCATCCTCCATTTCCACCCGATGCAGCTTCAGGACGAAGTCTGTaGGAGAGGATCGGTAGCAGTGCTGGAGCCTCCTGCTCCCCTCTC +
Preference number: 5 (lower is better)
Translates to: QHPPFPPDAASGRSL*ERIGSSAGASCSPL
Trigger: GAGAGGGGAGCAGGAGGCTCCAGCACTGCTACCGATCCTCTCCCACAGACTTCGTCCTGAAGCTGCATCGGGTGGAAATGGAGGATGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CAA 90 bp CATTCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGCACCTGCAGCTGGCCTaGGCTCGCTCTGTCTCTGTA +
Preference number: 5 (lower is better)
Translates to: HSSSTLQPNPSTLLSPAQHLQLA*ARSVSV
Trigger: TACAGAGACAGAGCGAGCCAAGGCCAGCTGCAGGTG...CTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS TCA 90 bp CTGCCATACTGCAGCAAGCCGTCATACTGCAGGTGCACCAGCATTTaGCTCCCTGCGGGGGCAGTGATGGTGGCAGTGGCATTGGCAACT +
Preference number: 5 (lower is better)
Translates to: LPYCSKPSYCRCTSI*LPAGAVMVAVALAT
Trigger: AGTTGCCAATGCCACTGCCACCATCACTGCCCCCGCAGGGAGTCAAATGCTGGTGCACCTGCAGTATGACGGCTTGCTGCAGTATGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS GCA 90 bp TGGGAGAGGATCGGTAGCAGTGCTGGAGCCTCCTGCTCCCCTCTCTaGCATACTGCAGCAAGCCGTCATACTGCAGGTGCACCAGCATTT +
Preference number: 5 (lower is better)
Translates to: WERIGSSAGASCSPL*HTAASRHTAGAPAF
Trigger: AAATGCTGGTGCACCTGCAGTATGACGGCTTGCTGCAGTATGGCAGAGAGGGGAGCAGGAGGCTCCAGCACTGCTACCGATCCTCTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CAA 90 bp TCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGGTGCTCGTAGATCTCCTTGCTTaGCACCCTCTGGGCATACAC +
Preference number: 5 (lower is better)
Translates to: SSTLQPNPSTLLSPAQVLVDLLA*HPLGIH
Trigger: GTGTATGCCCAGAGGGTGCAAAGCAAGGAGATCTAC...GAGCACCTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CAA 90 bp TCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGGTGCTCTGTTGCACGGTGGCTTaGGTTGTCTCACAGGTGAGT +
Preference number: 5 (lower is better)
Translates to: SSTLQPNPSTLLSPAQVLCCTVA*VVSQVS
Trigger: ACTCACCTGTGAGACAACCAAAGCCACCGTGCAACA...GAGCACCTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CAA 90 bp CATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGGTGCCTCTGGCTGGGCCACTaGTGCATATGGAATCTCTGT +
Preference number: 5 (lower is better)
Translates to: HPPRSNPIPPRSFLQPRCLWLGH*CIWNLC
Trigger: ACAGAGATTCCATATGCACAAGTGGCCCAGCCAGAG...GCACCTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CAA 90 bp TCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGGTGTCTGGGCACTTAACTTaGACACCTGCAGCTGGCCTT +
Preference number: 5 (lower is better)
Translates to: SSSTLQPNPSTLLSPAQVSGHLT*TPAAGL
Trigger: AAGGCCAGCTGCAGGTGTCAAAGTTAAGTGCCCAGA...CACCTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CAA 90 bp AATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCGCCTGGGTGGCCATGTaGCTGCCACTCAGTCACCCT +
Preference number: 5 (lower is better)
Translates to: NSFILHAPTQSLHAPFSSAWVAM*LPLSHP
Trigger: AGGGTGACTGAGTGGCAGCAACATGGCCACCCAGGC...GCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS TCA 90 bp TCTCAGTGGCTTGGCTCCCTCCTCCTTCCTGCATCAGGTACCAGGTaGGAGAGAGATGGGTGTGTTGCACGGTGGCTTTGGTTGTCTCAC +
Preference number: 5 (lower is better)
Translates to: SQWLGSLLLPASGTR*ERDGCVARWLWLSH
Trigger: GTGAGACAACCAAAGCCACCGTGCAACACACCCATCTCTCTCTCACCTGGTACCTGATGCAGGAAGGAGGAGGGAGCCAAGCCACTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS TCA 90 bp ATCCTGAATCCATTCTGTGGCCTCACAGAACACCTGGCCCTGATCTaGGGGCTGGAGCTTGCCTACAGACAGCCTGAAGGAAGTGGCTCC +
Preference number: 5 (lower is better)
Translates to: ILNPFCGLTEHLALI*GLELAYRQPEGSGS
Trigger: GGAGCCACTTCCTTCAGGCTGTCTGTAGGCAAGCTCCAGCCCTCAGATCAGGGCCAGGTGTTCTGTGAGGCCACAGAATGGATTCAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS TCA 90 bp TCTGGAGTCTCTCTGACACCCTGCATTCATAGGTACCGCTGTCTGTaGCCATGGCAGAGGCAATCTCCAGCCGAAAGGTGGCCCAGTCCA +
Preference number: 5 (lower is better)
Translates to: SGVSLTPCIHRYRCL*PWQRQSPAERWPSP
Trigger: TGGACTGGGCCACCTTTCGGCTGGAGATTGCCTCTGCCATGGTCACAGACAGCGGTACCTATGAATGCAGGGTGTCAGAGAGACTCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS GCA 90 bp GCAGCAGGACCGAGTCACCCTGCAGCCTCTCTATGTAGATCTCCTTaGTTTGCACCCTCTGGGCATACACTGCGTAAGAGAAGCCGGCAT +
Preference number: 5 (lower is better)
Translates to: AAGPSHPAASLCRSP*FAPSGHTLRKRSRH
Trigger: ATGCCGGCTTCTCTTACGCAGTGTATGCCCAGAGGGTGCAAAGCAAGGAGATCTACATAGAGAGGCTGCAGGGTGACTCGGTCCTGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS CCA 90 bp TCACAGGTGAGTTCCAAGGGCTCACCTTCCTTCTTACTGAGCGTCTaGGAGGGCATGGTGGCAGACAGGGTGTCGGGAACCACAGTAAGA +
Preference number: 5 (lower is better)
Translates to: SQVSSKGSPSFLLSV*EGMVADRVSGTTVR
Trigger: TCTTACTGTGGTTCCCGACACCCTGTCTGCCACCATGCCCTCCCAGACGCTCAGTAAGAAGGAAGGTGAGCCCTTGGAACTCACCTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS CCA 90 bp TGGCTCCCTCCTCCTTCCTGCATCAGGTACCAGGTGAGAGAGAGATaGGTGTGTTGCACGGTGGCTTTGGTTGTCTCACAGGTGAGTTCC +
Preference number: 5 (lower is better)
Translates to: WLPPPSCIRYQVRER*VCCTVALVVSQVSS
Trigger: GGAACTCACCTGTGAGACAACCAAAGCCACCGTGCAACACACCCATCTCTCTCTCACCTGGTACCTGATGCAGGAAGGAGGAGGGAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CAA 90 bp CCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGGTGCTCCGTACAGAGGGCCTTCTaGAATTTTTACTTCCCTCTG +
Preference number: 5 (lower is better)
Translates to: PPRSNPIPPRSFLQPRCSVQRAF*NFYFPL
Trigger: CAGAGGGAAGTAAAAATTCAAGAAGGCCCTCTGTAC...GGAGCACCTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CAA 90 bp CCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGGTGCTCCGATCCTCAGAGCTGTTaGATCTGTCTGCTTTCTTGT +
Preference number: 5 (lower is better)
Translates to: PPRSNPIPPRSFLQPRCSDPQSC*ICLLSC
Trigger: ACAAGAAAGCAGACAGATCAAACAGCTCTGAGGATC...GGAGCACCTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CAA 90 bp AGAATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCTGGGTGGCCATGTaGCTGCCACTCAGTCACCCT +
Preference number: 5 (lower is better)
Translates to: RIHSSSTLQPNPSTLLSPAWVAM*LPLSHP
Trigger: AGGGTGACTGAGTGGCAGCAACATGGCCACCCAGGC...TGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS TCA 90 bp GGTCCAGGACCCCACCAGCATCAGTCTGGGCAATTTCCTTCCCATTaGGAAACCACACACCCTGAAGCTGCGGGTTACCATCTCTGCCAA +
Preference number: 5 (lower is better)
Translates to: GPGPHQHQSGQFPSH*ETTHPEAAGYHLCQ
Trigger: TTGGCAGAGATGGTAACCCGCAGCTTCAGGGTGTGTGGTTTCTCAATGGGAAGGAAATTGCCCAGACTGATGCTGGTGGGGTCCTGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS GCA 90 bp CCTCCTTCCTGCATCAGGTACCAGGTGAGAGAGAGATGGGTGTGTTaGACGGTGGCTTTGGTTGTCTCACAGGTGAGTTCCAAGGGCTCA +
Preference number: 5 (lower is better)
Translates to: PPSCIRYQVRERWVC*TVALVVSQVSSKGS
Trigger: TGAGCCCTTGGAACTCACCTGTGAGACAACCAAAGCCACCGTGCAACACACCCATCTCTCTCTCACCTGGTACCTGATGCAGGAAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS GCA 90 bp GGCTCCAAGCTTGTCCAGCCGTACATCACCGGCCACAAACCTGTCTaGATAGGAGGACCCAGGGGTCAATACAAAGTCCTTGGAGAGAGA +
Preference number: 5 (lower is better)
Translates to: GSKLVQPYITGHKPV*IGGPRGQYKVLGER
Trigger: TCTCTCTCCAAGGACTTTGTATTGACCCCTGGGTCCTCCTATGCAGACAGGTTTGTGGCCGGTGATGTACGGCTGGACAAGCTTGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS GCA 90 bp TCGCCTGAGGCTTGGTTGATCCACTTGCCTGGGTGGCCATGTTGCTaGCACTCAGTCACCCTGCACCAATATATCCCAGCATCCTCCATT +
Preference number: 5 (lower is better)
Translates to: SPEAWLIHLPGWPCC*HSVTLHQYIPASSI
Trigger: AATGGAGGATGCTGGGATATATTGGTGCAGGGTGACTGAGTGGCAGCAACATGGCCACCCAGGCAAGTGGATCAACCAAGCCTCAGGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS CCA 90 bp CCTACATCCTCTGGACCCACGGAGAAGATCTTGAGAGAGAACGTCTaGGCACTTAACTTTGACACCTGCAGCTGGCCTTGGCTCGCTCTG +
Preference number: 5 (lower is better)
Translates to: PTSSGPTEKILRENV*ALNFDTCSWPWLAL
Trigger: CAGAGCGAGCCAAGGCCAGCTGCAGGTGTCAAAGTTAAGTGCCCAGACGTTCTCTCTCAAGATCTTCTCCGTGGGTCCAGAGGATGTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS CCA 90 bp ATTGTGGGCAATTCGAATAAGCCGATGAAAGGCTCCAGAGCCCGCTaGCTGGAACTGCCACGTTACCGAGAACGGCAGCTTGAGATCCGA +
Preference number: 5 (lower is better)
Translates to: IVGNSNKPMKGSRAR*LELPRYRERQLEIR
Trigger: TCGGATCTCAAGCTGCCGTTCTCGGTAACGTGGCAGTTCCAGCCAGCGGGCTCTGGAGCCTTTCATCGGCTTATTCGAATTGCCCACAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CAA 90 bp TCATTCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCATGTTGCACGGTGGCTTaGGTTGTCTCACAGGTGAGT +
Preference number: 5 (lower is better)
Translates to: SFILHAPTQSLHAPFSSPCCTVA*VVSQVS
Trigger: ACTCACCTGTGAGACAACCAAAGCCACCGTGCAACA...TGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CAA 90 bp CAGAATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCACATCCCCAGCTGCCTaGCAGAGAAGGGTAAGCGTC +
Preference number: 5 (lower is better)
Translates to: QNSFILHAPTQSLHAPFSTSPAA*QRRVSV
Trigger: GACGCTTACCCTTCTCTGCAAGGCAGCTGGGGATGT...GGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CAA 90 bp CATTCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGCTTTCATCTGGAGTTTaGAGATATGCAGCAGGACCG +
Preference number: 5 (lower is better)
Translates to: HSSSTLQPNPSTLLSPAQLSSGV*RYAAGP
Trigger: CGGTCCTGCTGCATATCTCAAAACTCCAGATGAAAG...CTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CAA 90 bp CAGAATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCCCCACGGAGAAGATCTaGAGAGAGAACGTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: QNSFILHAPTQSLHAPFSPTEKI*RENVWA
Trigger: TGCCCAGACGTTCTCTCTCAAGATCTTCTCCGTGGG...GGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS TCA 90 bp GCATCAGTCTGGGCAATTTCCTTCCCATTGAGAAACCACACACCCTaGAGCTGCGGGTTACCATCTCTGCCAACAGCCAGGCAAACCAGT +
Preference number: 5 (lower is better)
Translates to: ASVWAISFPLRNHTP*SCGLPSLPTARQTS
Trigger: ACTGGTTTGCCTGGCTGTTGGCAGAGATGGTAACCCGCAGCTTCAGGGTGTGTGGTTTCTCAATGGGAAGGAAATTGCCCAGACTGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS CCA 90 bp CAAACCTGTCTGCATAGGAGGACCCAGGGGTCAATACAAAGTCCTTaGAGAGAGAAACGATCTCAGTGGCTTGGCTCCCTCCTCCTTCCT +
Preference number: 5 (lower is better)
Translates to: QTCLHRRTQGSIQSP*REKRSQWLGSLLLP
Trigger: AGGAAGGAGGAGGGAGCCAAGCCACTGAGATCGTTTCTCTCTCCAAGGACTTTGTATTGACCCCTGGGTCCTCCTATGCAGACAGGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CAA 90 bp CCAAGGTCTAAAACAGAATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCAATGATCTGGACTTCCTaGGTCGGGGCGCTTGGCAGG +
Preference number: 5 (lower is better)
Translates to: PRSKTEFIHPPRSNPIPPMIWTS*VGALGR
Trigger: CCTGCCAAGCGCCCCGACCAAGGAAGTCCAGATCAT...TGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATTCTGTTTTAGACCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CAA 90 bp TCATTCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCACTTTCATCTGGAGTTTaGAGATATGCAGCAGGACCG +
Preference number: 5 (lower is better)
Translates to: SFILHAPTQSLHAPFSSPLSSGV*RYAAGP
Trigger: CGGTCCTGCTGCATATCTCAAAACTCCAGATGAAAG...TGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CAA 90 bp TCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGGTGTCAGATAGGATGCATTaGCAGAAACGGAAGAGAAGT +
Preference number: 5 (lower is better)
Translates to: SSSTLQPNPSTLLSPAQVSDRMH*QKRKRS
Trigger: ACTTCTCTTCCGTTTCTGCAAATGCATCCTATCTGA...CACCTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS TCA 90 bp GCCAACAGCCAGGCAAACCAGTTCCAAGGGTTTTCCTTCATCAGGTaGGCTACTGGCTGTGATGCTCACTGTAAAATCTCTTGCTGCCGG +
Preference number: 5 (lower is better)
Translates to: ANSQANQFQGFSFIR*ATGCDAHCKISCCR
Trigger: CCGGCAGCAAGAGATTTTACAGTGAGCATCACAGCCAGTAGCTCACCTGATGAAGGAAAACCCTTGGAACTGGTTTGCCTGGCTGTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CAA 90 bp ATGGTTAACAATCTATGTCCATGGCACATCCCTTCTGGTCCCTTGGTAACTTGGATGATCTGGACTTCCTaGGTCGGGGCGCTTGGCAGG +
Preference number: 5 (lower is better)
Translates to: MVNNLCPWHIPSGPLVTWMIWTS*VGALGR
Trigger: CCTGCCAAGCGCCCCGACCAAGGAAGTCCAGATCAT...CCAAGTTACCAAGGGACCAGAAGGGATGTGCCATGGACATAGATTGTTAACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000147399.9
CDS-3UTR CAA 90 bp CATTCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCCAGTCAGATAGGATGCATTaGCAGAAACGGAAGAGAAGT +
Preference number: 5 (lower is better)
Translates to: HSSSTLQPNPSTLLSPAQSDRMH*QKRKRS
Trigger: ACTTCTCTTCCGTTTCTGCAAATGCATCCTATCTGA...CTGGGCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS GCA 90 bp CCTCTCTATGTAGATCTCCTTGCTTTGCACCCTCTGGGCATACACTaGGTAAGAGAAGCCGGCATCCTTGGTACTGATGATCTGGACTTC +
Preference number: 5 (lower is better)
Translates to: PLYVDLLALHPLGIH*VREAGILGTDDLDF
Trigger: GAAGTCCAGATCATCAGTACCAAGGATGCCGGCTTCTCTTACGCAGTGTATGCCCAGAGGGTGCAAAGCAAGGAGATCTACATAGAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CAA 90 bp CAAGGTCTAAAACAGAATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCACCCCACGGAGAAGATCTaGAGAGAGAACGTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: QGLKQNSFILHAPTQSLHPTEKI*RENVWA
Trigger: TGCCCAGACGTTCTCTCTCAAGATCTTCTCCGTGGG...GTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATTCTGTTTTAGACCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CAA 90 bp AATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGCCATTCAACGGTGCCATaGTGGGCAATTCGAATAAGC +
Preference number: 5 (lower is better)
Translates to: NSFILHAPTQSLHAPFSSHSTVP*WAIRIS
Trigger: GCTTATTCGAATTGCCCACAATGGCACCGTTGAATG...GCTGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS GCA 90 bp CATGGTGGCAGACAGGGTGTCGGGAACCACAGTAAGATTTGTCTTTaGACTGTAACTTCCAAAGTACTTCCCATCCGTGTTGGGTGTGTG +
Preference number: 5 (lower is better)
Translates to: HGGRQGVGNHSKICL*TVTSKVLPIRVGCV
Trigger: CACACACCCAACACGGATGGGAAGTACTTTGGAAGTTACAGTGCAAAGACAAATCTTACTGTGGTTCCCGACACCCTGTCTGCCACCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS CCA 90 bp TCTCCATACTCGGTAGCGTTTCCTGTCCAATTCACTTTGGAGACATaGACCTGGCTTCCTGTGGGCCTGAGTTTCAATTCTGTGAGTCCT +
Preference number: 5 (lower is better)
Translates to: SPYSVAFPVQFTLET*TWLPVGLSFNSVSP
Trigger: AGGACTCACAGAATTGAAACTCAGGCCCACAGGAAGCCAGGTCCATGTCTCCAAAGTGAATTGGACAGGAAACGCTACCGAGTATGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CAA 90 bp CAAGGTCTAAAACAGAATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCACGAGAAGCCGGCATCCTaGGTACTGATGATCTGGACT +
Preference number: 5 (lower is better)
Translates to: QGLKQNSFILHAPTQSLHEKPAS*VLMIWT
Trigger: AGTCCAGATCATCAGTACCAAGGATGCCGGCTTCTC...GTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATTCTGTTTTAGACCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CAA 90 bp ATCCCTTCTGGTCCCTTGGTAACTTGGCCAAGGTCTAAAACAGAATTCATTCATCACCTGCAGCTGGCCTaGGCTCGCTCTGTCTCTGTA +
Preference number: 5 (lower is better)
Translates to: IPSGPLVTWPRSKTEFIHHLQLA*ARSVSV
Trigger: TACAGAGACAGAGCGAGCCAAGGCCAGCTGCAGGTG...ATGAATGAATTCTGTTTTAGACCTTGGCCAAGTTACCAAGGGACCAGAAGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CAA 90 bp CAAGGTCTAAAACAGAATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCACTCTGGGCACTTAACTTaGACACCTGCAGCTGGCCTT +
Preference number: 5 (lower is better)
Translates to: QGLKQNSFILHAPTQSLHSGHLT*TPAAGL
Trigger: AAGGCCAGCTGCAGGTGTCAAAGTTAAGTGCCCAGA...GTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATTCTGTTTTAGACCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CAA 90 bp CTTGGCCAAGGTCTAAAACAGAATTCATTCATCCTCCACGCTCCAACCCAATCCGTTGACTGCAAACCTTaGGCCTGGTTCTGGAGTCTC +
Preference number: 5 (lower is better)
Translates to: LGQGLKQNSFILHAPTQSVDCKP*AWFWSL
Trigger: GAGACTCCAGAACCAGGCCAAAGGTTTGCAGTCAAC...GGATTGGGTTGGAGCGTGGAGGATGAATGAATTCTGTTTTAGACCTTGGCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CAA 90 bp CAAGGTCTAAAACAGAATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCACCTCTGGCTGGGCCACTaGTGCATATGGAATCTCTGT +
Preference number: 5 (lower is better)
Translates to: QGLKQNSFILHAPTQSLHLWLGH*CIWNLC
Trigger: ACAGAGATTCCATATGCACAAGTGGCCCAGCCAGAG...GTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATTCTGTTTTAGACCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS TCA 90 bp CTGCCGGCTGGATCCTCAGAGCTGTTTGATCTGTCTGCTTTCTTGTaGTCAAAGTCCACGTTTCATCTGGATCCTGAATCCATTCTGTGG +
Preference number: 5 (lower is better)
Translates to: LPAGSSELFDLSAFL*SKSTFHLDPESILW
Trigger: CCACAGAATGGATTCAGGATCCAGATGAAACGTGGACTTTGATCACAAGAAAGCAGACAGATCAAACAGCTCTGAGGATCCAGCCGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CAA 90 bp AGAATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCACGCTCCTTTCTCCAGATCCTCAGAGCTGTTaGATCTGTCTGCTTTCTTGT +
Preference number: 5 (lower is better)
Translates to: RIHSSSTLQPNPSTLLSPDPQSC*ICLLSC
Trigger: ACAAGAAAGCAGACAGATCAAACAGCTCTGAGGATC...TGGAGAAAGGAGCGTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CAA 90 bp ATGGTTAACAATCTATGTCCATGGCACATCCCTTCTGGTCCCTTGGTAACTTGGGTTGACTGCAAACCTTaGGCCTGGTTCTGGAGTCTC +
Preference number: 5 (lower is better)
Translates to: MVNNLCPWHIPSGPLVTWVDCKP*AWFWSL
Trigger: GAGACTCCAGAACCAGGCCAAAGGTTTGCAGTCAAC...CCAAGTTACCAAGGGACCAGAAGGGATGTGCCATGGACATAGATTGTTAACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147399.9
CDS CCA 90 bp TGTTTGATCTGTCTGCTTTCTTGTGATCAAAGTCCACGTTTCATCTaGATCCTGAATCCATTCTGTGGCCTCACAGAACACCTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: CLICLLSCDQSPRFI*ILNPFCGLTEHLAL
Trigger: CAGGGCCAGGTGTTCTGTGAGGCCACAGAATGGATTCAGGATCCAGATGAAACGTGGACTTTGATCACAAGAAAGCAGACAGATCAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS TCA 90 bp CTCACTGTAAAATCTCTTGCTGCCGGCTGGATCCTCAGAGCTGTTTaGTCTGTCTGCTTTCTTGTGATCAAAGTCCACGTTTCATCTGGA +
Preference number: 5 (lower is better)
Translates to: LTVKSLAAGWILRAV*SVCFLVIKVHVSSG
Trigger: TCCAGATGAAACGTGGACTTTGATCACAAGAAAGCAGACAGATCAAACAGCTCTGAGGATCCAGCCGGCAGCAAGAGATTTTACAGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CAA 90 bp CAAGGTCTAAAACAGAATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCACGTACAGAGGGCCTTCTaGAATTTTTACTTCCCTCTG +
Preference number: 5 (lower is better)
Translates to: QGLKQNSFILHAPTQSLHVQRAF*NFYFPL
Trigger: CAGAGGGAAGTAAAAATTCAAGAAGGCCCTCTGTAC...GTGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATTCTGTTTTAGACCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CAA 90 bp ATCCCTTCTGGTCCCTTGGTAACTTGGCCAAGGTCTAAAACAGAATTCATTCATGTAGATCTCCTTGCTTaGCACCCTCTGGGCATACAC +
Preference number: 5 (lower is better)
Translates to: IPSGPLVTWPRSKTEFIHVDLLA*HPLGIH
Trigger: GTGTATGCCCAGAGGGTGCAAAGCAAGGAGATCTAC...ATGAATGAATTCTGTTTTAGACCTTGGCCAAGTTACCAAGGGACCAGAAGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CAA 90 bp ATGGTTAACAATCTATGTCCATGGCACATCCCTTCTGGTCCCTTGGTAACTTGGCATTCAACGGTGCCATaGTGGGCAATTCGAATAAGC +
Preference number: 5 (lower is better)
Translates to: MVNNLCPWHIPSGPLVTWHSTVP*WAIRIS
Trigger: GCTTATTCGAATTGCCCACAATGGCACCGTTGAATG...CCAAGTTACCAAGGGACCAGAAGGGATGTGCCATGGACATAGATTGTTAACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147399.9
CDS TCA 90 bp ACTACACAGGACAGGTGGAAGGTATGGGCTAGCATCACTTGTGGCTaGCGGCTCATCAGATTAACTCGTAAACTTGACTTCAGAGATTTT +
Preference number: 5 (lower is better)
Translates to: TTQDRWKVWASITCG*RLIRLTRKLDFRDF
Trigger: AAAATCTCTGAAGTCAAGTTTACGAGTTAATCTGATGAGCCGTCAGCCACAAGTGATGCTAGCCCATACCTTCCACCTGTCCTGTGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS TCA 90 bp TTTTCAGATAGGATGCATTTGCAGAAACGGAAGAGAAGTACCAAATaGTGGATAACGGAAGGTTTCCAGCAGATCGGGACAAGATGGCAC +
Preference number: 5 (lower is better)
Translates to: FSDRMHLQKRKRSTK*WITEGFQQIGTRWH
Trigger: GTGCCATCTTGTCCCGATCTGCTGGAAACCTTCCGTTATCCATCATTTGGTACTTCTCTTCCGTTTCTGCAAATGCATCCTATCTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CAA 90 bp CCAAGGTCTAAAACAGAATTCATTCATCCTCCACGCTCCAACCCAATCCCTCCAATCGTAGATTTGGAGTaGAGAACGAAAGAAAGACTG +
Preference number: 5 (lower is better)
Translates to: PRSKTEFIHPPRSNPIPPIVDLE*RTKERL
Trigger: CAGTCTTTCTTTCGTTCTCAACTCCAAATCTACGAT...TGGAGGGATTGGGTTGGAGCGTGGAGGATGAATGAATTCTGTTTTAGACCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS-3UTR CAA 90 bp ATGGTTAACAATCTATGTCCATGGCACATCCCTTCTGGTCCCTTGGTAACTTGGATCGTAGATTTGGAGTaGAGAACGAAAGAAAGACTG +
Preference number: 5 (lower is better)
Translates to: MVNNLCPWHIPSGPLVTWIVDLE*RTKERL
Trigger: CAGTCTTTCTTTCGTTCTCAACTCCAAATCTACGAT...CCAAGTTACCAAGGGACCAGAAGGGATGTGCCATGGACATAGATTGTTAACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000147399.9
CDS GCA 72 bp TGCGGGGGCAGTGATGGTGGCAGTGGCATTGGCAACTaGGGCAGCAGTAGCCGTGGCAGTTCCTCTGCCCCG +
Preference number: 6 (lower is better)
Translates to: CGGSDGGSGIGN*GSSSRGSSSAP
Trigger: CGGGGCAGAGGAACTGCCACGGCTACTGCTGCCGCAGTTGCCAATGCCACTGCCACCATCACTGCCCCCGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS TCA 72 bp CCCCGAGGAGCAGATCAGGGAGGAGACCGTGGGCTCTaGGCGCAGCACCCTGAGCACCATTCGTTGCGACTC +
Preference number: 6 (lower is better)
Translates to: PRGADQGGDRGL*AQHPEHHSLRL
Trigger: GAGTCGCAACGAATGGTGCTCAGGGTGCTGCGCTCAGAGCCCACGGTCTCCTCCCTGATCTGCTCCTCGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS CAA 90 bp CTCCTTCCCACACAGTACGCTGCTCGGCAGACACGGTCACACTTCTaGCTGCTGGCTCCCTCAGCTGCACCCGGTAGCCTGGTGACTGCT +
Preference number: 6 (lower is better)
Translates to: LLPTQYAARQTRSHF*LLAPSAAPGSLVTA
Trigger: AGCAGTCACCAGGCTACCGGGTGCAGCTGAGGGAGCCAGCAGCAAGAAGTGTGACCGTGTCTGCCGAGCAGCGTACTGTGTGGGAAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS CAA 72 bp CTGCAGCAAGCCGTCATACTGCAGGTGCACCAGCATTaGACTCCCTGCGGGGGCAGTGATGGTGGCAGTGGC +
Preference number: 6 (lower is better)
Translates to: LQQAVILQVHQH*TPCGGSDGGSG
Trigger: GCCACTGCCACCATCACTGCCCCCGCAGGGAGTCAAATGCTGGTGCACCTGCAGTATGACGGCTTGCTGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS TCA 72 bp TGCAGCAAGCCGTCATACTGCAGGTGCACCAGCATTTaGCTCCCTGCGGGGGCAGTGATGGTGGCAGTGGCA +
Preference number: 6 (lower is better)
Translates to: CSKPSYCRCTSI*LPAGAVMVAVA
Trigger: TGCCACTGCCACCATCACTGCCCCCGCAGGGAGTCAAATGCTGGTGCACCTGCAGTATGACGGCTTGCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS GCA 72 bp CCCGGAGAAGAGACTCCCAGCTGCACAGTACCATCTTaGCCCATGCCAGCCACAAACACGGGTGTGGACTGG +
Preference number: 6 (lower is better)
Translates to: PGEETPSCTVPS*PMPATNTGVDW
Trigger: CCAGTCCACACCCGTGTTTGTGGCTGGCATGGGGCAAGATGGTACTGTGCAGCTGGGAGTCTCTTCTCCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS GCA 72 bp GTGGGCTCTGAGCGCAGCACCCTGAGCACCATTCGTTaGGACTCGCCTGAGGCTTGGTTGATCCACTTGCCT +
Preference number: 6 (lower is better)
Translates to: VGSERSTLSTIR*DSPEAWLIHLP
Trigger: AGGCAAGTGGATCAACCAAGCCTCAGGCGAGTCGCAACGAATGGTGCTCAGGGTGCTGCGCTCAGAGCCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS GCA 72 bp ATCGGTAGCAGTGCTGGAGCCTCCTGCTCCCCTCTCTaGCATACTGCAGCAAGCCGTCATACTGCAGGTGCA +
Preference number: 6 (lower is better)
Translates to: IGSSAGASCSPL*HTAASRHTAGA
Trigger: TGCACCTGCAGTATGACGGCTTGCTGCAGTATGGCAGAGAGGGGAGCAGGAGGCTCCAGCACTGCTACCGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS CCA 72 bp AGTTCCAAGGGCTCACCTTCCTTCTTACTGAGCGTCTaGGAGGGCATGGTGGCAGACAGGGTGTCGGGAACC +
Preference number: 6 (lower is better)
Translates to: SSKGSPSFLLSV*EGMVADRVSGT
Trigger: GGTTCCCGACACCCTGTCTGCCACCATGCCCTCCCAGACGCTCAGTAAGAAGGAAGGTGAGCCCTTGGAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS CCA 72 bp CCATTTCCACCCGATGCAGCTTCAGGACGAAGTCTGTaGGAGAGGATCGGTAGCAGTGCTGGAGCCTCCTGC +
Preference number: 6 (lower is better)
Translates to: PFPPDAASGRSL*ERIGSSAGASC
Trigger: GCAGGAGGCTCCAGCACTGCTACCGATCCTCTCCCACAGACTTCGTCCTGAAGCTGCATCGGGTGGAAATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS CCA 72 bp ACCCTGAGCACCATTCGTTGCGACTCGCCTGAGGCTTaGTTGATCCACTTGCCTGGGTGGCCATGTTGCTGC +
Preference number: 6 (lower is better)
Translates to: TLSTIRCDSPEA*LIHLPGWPCCC
Trigger: GCAGCAACATGGCCACCCAGGCAAGTGGATCAACCAAGCCTCAGGCGAGTCGCAACGAATGGTGCTCAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS CAA 90 bp TCTGCCATACTGCAGCAAGCCGTCATACTGCAGGTGCACCAGCATTaGACTCCCTGCGGGGGCAGTGATGGTGGCAGTGGCATTGGCAAC +
Preference number: 6 (lower is better)
Translates to: SAILQQAVILQVHQH*TPCGGSDGGSGIGN
Trigger: GTTGCCAATGCCACTGCCACCATCACTGCCCCCGCAGGGAGTCAAATGCTGGTGCACCTGCAGTATGACGGCTTGCTGCAGTATGGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS GCA 72 bp AGAAGGGTAAGCGTCTCTCCTTCCCACACAGTACGCTaGTCGGCAGACACGGTCACACTTCTTGCTGCTGGC +
Preference number: 6 (lower is better)
Translates to: RRVSVSPSHTVR*SADTVTLLAAG
Trigger: GCCAGCAGCAAGAAGTGTGACCGTGTCTGCCGAGCAGCGTACTGTGTGGGAAGGAGAGACGCTTACCCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS GCA 72 bp AAGAGACTCCCAGCTGCACAGTACCATCTTGCCCCATaGCAGCCACAAACACGGGTGTGGACTGGTCCTGTG +
Preference number: 6 (lower is better)
Translates to: KRLPAAQYHLAP*QPQTRVWTGPV
Trigger: CACAGGACCAGTCCACACCCGTGTTTGTGGCTGGCATGGGGCAAGATGGTACTGTGCAGCTGGGAGTCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS CAA 72 bp ATTCGTTGCGACTCGCCTGAGGCTTGGTTGATCCACTaGCCTGGGTGGCCATGTTGCTGCCACTCAGTCACC +
Preference number: 6 (lower is better)
Translates to: IRCDSPEAWLIH*PGWPCCCHSVT
Trigger: GGTGACTGAGTGGCAGCAACATGGCCACCCAGGCAAGTGGATCAACCAAGCCTCAGGCGAGTCGCAACGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS TCA 72 bp CCTGATCTGAGGGCTGGAGCTTGCCTACAGACAGCCTaGAGGAAGTGGCTCCAAGCTTGTCCAGCCGTACAT +
Preference number: 6 (lower is better)
Translates to: PDLRAGACLQTA*RKWLQACPAVH
Trigger: ATGTACGGCTGGACAAGCTTGGAGCCACTTCCTTCAGGCTGTCTGTAGGCAAGCTCCAGCCCTCAGATCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS TCA 72 bp CTGGCTGGAACTGCCACGTTACCGAGAACGGCAGCTTaGGATCCGAGTAGTTGGCCCTCACTACACAGGACA +
Preference number: 6 (lower is better)
Translates to: LAGTATLPRTAA*DPSSWPSLHRT
Trigger: TGTCCTGTGTAGTGAGGGCCAACTACTCGGATCTCAAGCTGCCGTTCTCGGTAACGTGGCAGTTCCAGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS GCA 72 bp TGCCTGGGTGGCCATGTTGCTGCCACTCAGTCACCCTaGACCAATATATCCCAGCATCCTCCATTTCCACCC +
Preference number: 6 (lower is better)
Translates to: CLGGHVAATQSP*TNISQHPPFPP
Trigger: GGGTGGAAATGGAGGATGCTGGGATATATTGGTGCAGGGTGACTGAGTGGCAGCAACATGGCCACCCAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS CAA 90 bp CAGGACCGAGTCACCCTGCAGCCTCTCTATGTAGATCTCCTTGCTTaGCACCCTCTGGGCATACACTGCGTAAGAGAAGCCGGCATCCTT +
Preference number: 6 (lower is better)
Translates to: QDRVTLQPLYVDLLA*HPLGIHCVREAGIL
Trigger: AAGGATGCCGGCTTCTCTTACGCAGTGTATGCCCAGAGGGTGCAAAGCAAGGAGATCTACATAGAGAGGCTGCAGGGTGACTCGGTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS CAA 90 bp TCCTCCTTCCTGCATCAGGTACCAGGTGAGAGAGAGATGGGTGTGTaGCACGGTGGCTTTGGTTGTCTCACAGGTGAGTTCCAAGGGCTC +
Preference number: 6 (lower is better)
Translates to: SSFLHQVPGEREMGV*HGGFGCLTGEFQGL
Trigger: GAGCCCTTGGAACTCACCTGTGAGACAACCAAAGCCACCGTGCAACACACCCATCTCTCTCTCACCTGGTACCTGATGCAGGAAGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS TCA 72 bp TCTCTGACACCCTGCATTCATAGGTACCGCTGTCTGTaGCCATGGCAGAGGCAATCTCCAGCCGAAAGGTGG +
Preference number: 6 (lower is better)
Translates to: SLTPCIHRYRCL*PWQRQSPAERW
Trigger: CCACCTTTCGGCTGGAGATTGCCTCTGCCATGGTCACAGACAGCGGTACCTATGAATGCAGGGTGTCAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS GCA 72 bp GAGGCTTGGTTGATCCACTTGCCTGGGTGGCCATGTTaGTGCCACTCAGTCACCCTGCACCAATATATCCCA +
Preference number: 6 (lower is better)
Translates to: EAWLIHLPGWPC*CHSVTLHQYIP
Trigger: TGGGATATATTGGTGCAGGGTGACTGAGTGGCAGCAACATGGCCACCCAGGCAAGTGGATCAACCAAGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS CCA 72 bp GGTACTGATGATCTGGACTTCCTTGGTCGGGGCGCTTaGCAGGTAAATAGACCACCGGAAATCCTGCGTGGA +
Preference number: 6 (lower is better)
Translates to: GTDDLDFLGRGA*QVNRPPEILRG
Trigger: TCCACGCAGGATTTCCGGTGGTCTATTTACCTGCCAAGCGCCCCGACCAAGGAAGTCCAGATCATCAGTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS CCA 72 bp AATTCGAATAAGCCGATGAAAGGCTCCAGAGCCCGCTaGCTGGAACTGCCACGTTACCGAGAACGGCAGCTT +
Preference number: 6 (lower is better)
Translates to: NSNKPMKGSRAR*LELPRYRERQL
Trigger: AAGCTGCCGTTCTCGGTAACGTGGCAGTTCCAGCCAGCGGGCTCTGGAGCCTTTCATCGGCTTATTCGAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS CAA 72 bp GGCACTCGTACTCGCCAGCATCTTTCATCTGGAGTTTaGAGATATGCAGCAGGACCGAGTCACCCTGCAGCC +
Preference number: 6 (lower is better)
Translates to: GTRTRQHLSSGV*RYAAGPSHPAA
Trigger: GGCTGCAGGGTGACTCGGTCCTGCTGCATATCTCAAAACTCCAGATGAAAGATGCTGGCGAGTACGAGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS CAA 72 bp TTGCCTACAGACAGCCTGAAGGAAGTGGCTCCAAGCTaGTCCAGCCGTACATCACCGGCCACAAACCTGTCT +
Preference number: 6 (lower is better)
Translates to: LPTDSLKEVAPS*SSRTSPATNLS
Trigger: AGACAGGTTTGTGGCCGGTGATGTACGGCTGGACAAGCTTGGAGCCACTTCCTTCAGGCTGTCTGTAGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS GCA 72 bp CCGAGTCACCCTGCAGCCTCTCTATGTAGATCTCCTTaGTTTGCACCCTCTGGGCATACACTGCGTAAGAGA +
Preference number: 6 (lower is better)
Translates to: PSHPAASLCRSP*FAPSGHTLRKR
Trigger: TCTCTTACGCAGTGTATGCCCAGAGGGTGCAAAGCAAGGAGATCTACATAGAGAGGCTGCAGGGTGACTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS GCA 72 bp TGCATCAGGTACCAGGTGAGAGAGAGATGGGTGTGTTaGACGGTGGCTTTGGTTGTCTCACAGGTGAGTTCC +
Preference number: 6 (lower is better)
Translates to: CIRYQVRERWVC*TVALVVSQVSS
Trigger: GGAACTCACCTGTGAGACAACCAAAGCCACCGTGCAACACACCCATCTCTCTCTCACCTGGTACCTGATGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS GCA 72 bp CTTGTCCAGCCGTACATCACCGGCCACAAACCTGTCTaGATAGGAGGACCCAGGGGTCAATACAAAGTCCTT +
Preference number: 6 (lower is better)
Translates to: LVQPYITGHKPV*IGGPRGQYKVL
Trigger: AAGGACTTTGTATTGACCCCTGGGTCCTCCTATGCAGACAGGTTTGTGGCCGGTGATGTACGGCTGGACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS GCA 72 bp CACCAATATATCCCAGCATCCTCCATTTCCACCCGATaGAGCTTCAGGACGAAGTCTGTGGGAGAGGATCGG +
Preference number: 6 (lower is better)
Translates to: HQYIPASSISTR*SFRTKSVGEDR
Trigger: CCGATCCTCTCCCACAGACTTCGTCCTGAAGCTGCATCGGGTGGAAATGGAGGATGCTGGGATATATTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS CCA 72 bp CTGCATAGGAGGACCCAGGGGTCAATACAAAGTCCTTaGAGAGAGAAACGATCTCAGTGGCTTGGCTCCCTC +
Preference number: 6 (lower is better)
Translates to: LHRRTQGSIQSP*REKRSQWLGSL
Trigger: GAGGGAGCCAAGCCACTGAGATCGTTTCTCTCTCCAAGGACTTTGTATTGACCCCTGGGTCCTCCTATGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS CCA 72 bp TCTCTCTTCAGGTCCAGGACCCCACCAGCATCAGTCTaGGCAATTTCCTTCCCATTGAGAAACCACACACCC +
Preference number: 6 (lower is better)
Translates to: SLFRSRTPPASV*AISFPLRNHTP
Trigger: GGGTGTGTGGTTTCTCAATGGGAAGGAAATTGCCCAGACTGATGCTGGTGGGGTCCTGGACCTGAAGAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS CAA 72 bp GTCACCCTGCAGCCTCTCTATGTAGATCTCCTTGCTTaGCACCCTCTGGGCATACACTGCGTAAGAGAAGCC +
Preference number: 6 (lower is better)
Translates to: VTLQPLYVDLLA*HPLGIHCVREA
Trigger: GGCTTCTCTTACGCAGTGTATGCCCAGAGGGTGCAAAGCAAGGAGATCTACATAGAGAGGCTGCAGGGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS CAA 72 bp CTGCATCAGGTACCAGGTGAGAGAGAGATGGGTGTGTaGCACGGTGGCTTTGGTTGTCTCACAGGTGAGTTC +
Preference number: 6 (lower is better)
Translates to: LHQVPGEREMGV*HGGFGCLTGEF
Trigger: GAACTCACCTGTGAGACAACCAAAGCCACCGTGCAACACACCCATCTCTCTCTCACCTGGTACCTGATGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS CCA 72 bp CTCTGCCACTTCACAACTGTAGGTGCCTACATCCTCTaGACCCACGGAGAAGATCTTGAGAGAGAACGTCTG +
Preference number: 6 (lower is better)
Translates to: LCHFTTVGAYIL*THGEDLERERL
Trigger: CAGACGTTCTCTCTCAAGATCTTCTCCGTGGGTCCAGAGGATGTAGGCACCTACAGTTGTGAAGTGGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS CAA 90 bp ATCAGGTACCAGGTGAGAGAGAGATGGGTGTGTTGCACGGTGGCTTaGGTTGTCTCACAGGTGAGTTCCAAGGGCTCACCTTCCTTCTTA +
Preference number: 6 (lower is better)
Translates to: IRYQVRERWVCCTVA*VVSQVSSKGSPSFL
Trigger: TAAGAAGGAAGGTGAGCCCTTGGAACTCACCTGTGAGACAACCAAAGCCACCGTGCAACACACCCATCTCTCTCTCACCTGGTACCTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS CAA 90 bp AAGCCCGCCTCTCCATACTCGGTAGCGTTTCCTGTCCAATTCACTTaGGAGACATGGACCTGGCTTCCTGTGGGCCTGAGTTTCAATTCT +
Preference number: 6 (lower is better)
Translates to: KPASPYSVAFPVQFT*ETWTWLPVGLSFNS
Trigger: AGAATTGAAACTCAGGCCCACAGGAAGCCAGGTCCATGTCTCCAAAGTGAATTGGACAGGAAACGCTACCGAGTATGGAGAGGCGGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS GCA 72 bp GTAGATCTCCTTGCTTTGCACCCTCTGGGCATACACTaGGTAAGAGAAGCCGGCATCCTTGGTACTGATGAT +
Preference number: 6 (lower is better)
Translates to: VDLLALHPLGIH*VREAGILGTDD
Trigger: ATCATCAGTACCAAGGATGCCGGCTTCTCTTACGCAGTGTATGCCCAGAGGGTGCAAAGCAAGGAGATCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS GCA 72 bp GCTACTGGCTGTGATGCTCACTGTAAAATCTCTTGCTaGCGGCTGGATCCTCAGAGCTGTTTGATCTGTCTG +
Preference number: 6 (lower is better)
Translates to: ATGCDAHCKISC*RLDPQSCLICL
Trigger: CAGACAGATCAAACAGCTCTGAGGATCCAGCCGGCAGCAAGAGATTTTACAGTGAGCATCACAGCCAGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS CCA 72 bp TCAATACAAAGTCCTTGGAGAGAGAAACGATCTCAGTaGCTTGGCTCCCTCCTCCTTCCTGCATCAGGTACC +
Preference number: 6 (lower is better)
Translates to: SIQSPWREKRSQ*LGSLLLPASGT
Trigger: GGTACCTGATGCAGGAAGGAGGAGGGAGCCAAGCCACTGAGATCGTTTCTCTCTCCAAGGACTTTGTATTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS CAA 90 bp CCTGATGCTGACAGGGTAACCTTCGGCTCTGTACAGAGGGCCTTCTaGAATTTTTACTTCCCTCTGGCCGATGCTGAACTTAGCAGAAAC +
Preference number: 6 (lower is better)
Translates to: PDADRVTFGSVQRAF*NFYFPLADAELSRN
Trigger: GTTTCTGCTAAGTTCAGCATCGGCCAGAGGGAAGTAAAAATTCAAGAAGGCCCTCTGTACAGAGCCGAAGGTTACCCTGTCAGCATCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000167086.2
CDS CCA 72 bp AGGTGGCAGATACTCTGGCTGGGCCACTTGTGCATATaGAATCTCTGTCATAAACCTCCACTGTACACCGAT +
Preference number: 6 (lower is better)
Translates to: RWQILWLGHLCI*NLCHKPPLYTD
Trigger: ATCGGTGTACAGTGGAGGTTTATGACAGAGATTCCATATGCACAAGTGGCCCAGCCAGAGTATCTGCCACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS CCA 72 bp TCGGTAGCGTTTCCTGTCCAATTCACTTTGGAGACATaGACCTGGCTTCCTGTGGGCCTGAGTTTCAATTCT +
Preference number: 6 (lower is better)
Translates to: SVAFPVQFTLET*TWLPVGLSFNS
Trigger: AGAATTGAAACTCAGGCCCACAGGAAGCCAGGTCCATGTCTCCAAAGTGAATTGGACAGGAAACGCTACCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS CAA 72 bp ACAGTGACTGAAATCTTCTGGGTTGACTGCAAACCTTaGGCCTGGTTCTGGAGTCTCTCTGACACCCTGCAT +
Preference number: 6 (lower is better)
Translates to: TVTEIFWVDCKP*AWFWSLSDTLH
Trigger: ATGCAGGGTGTCAGAGAGACTCCAGAACCAGGCCAAAGGTTTGCAGTCAACCCAGAAGATTTCAGTCACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS TCA 72 bp TTTCTTGTGATCAAAGTCCACGTTTCATCTGGATCCTaGATCCATTCTGTGGCCTCACAGAACACCTGGCCC +
Preference number: 6 (lower is better)
Translates to: FLVIKVHVSSGS*IHSVASQNTWP
Trigger: GGGCCAGGTGTTCTGTGAGGCCACAGAATGGATTCAGGATCCAGATGAAACGTGGACTTTGATCACAAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS TCA 72 bp GACAGGTGGAAGGTATGGGCTAGCATCACTTGTGGCTaGCGGCTCATCAGATTAACTCGTAAACTTGACTTC +
Preference number: 6 (lower is better)
Translates to: DRWKVWASITCG*RLIRLTRKLDF
Trigger: GAAGTCAAGTTTACGAGTTAATCTGATGAGCCGTCAGCCACAAGTGATGCTAGCCCATACCTTCCACCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS CAA 90 bp GCTCACTGTAAAATCTCTTGCTGCCGGCTGGATCCTCAGAGCTGTTaGATCTGTCTGCTTTCTTGTGATCAAAGTCCACGTTTCATCTGG +
Preference number: 6 (lower is better)
Translates to: AHCKISCCRLDPQSC*ICLLSCDQSPRFIW
Trigger: CCAGATGAAACGTGGACTTTGATCACAAGAAAGCAGACAGATCAAACAGCTCTGAGGATCCAGCCGGCAGCAAGAGATTTTACAGTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS TCA 72 bp AAATCTCTTGCTGCCGGCTGGATCCTCAGAGCTGTTTaGTCTGTCTGCTTTCTTGTGATCAAAGTCCACGTT +
Preference number: 6 (lower is better)
Translates to: KSLAAGWILRAV*SVCFLVIKVHV
Trigger: AACGTGGACTTTGATCACAAGAAAGCAGACAGATCAAACAGCTCTGAGGATCCAGCCGGCAGCAAGAGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS TCA 72 bp ATCGTAGATTTGGAGTTGAGAACGAAAGAAAGACTGTaGCACCTTCGTCTTCCTGTGGATCTGGGAGAGGAC +
Preference number: 6 (lower is better)
Translates to: IVDLELRTKERL*HLRLPVDLGED
Trigger: GTCCTCTCCCAGATCCACAGGAAGACGAAGGTGTCACAGTCTTTCTTTCGTTCTCAACTCCAAATCTACGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS CAA 72 bp AAAATCTCTTGCTGCCGGCTGGATCCTCAGAGCTGTTaGATCTGTCTGCTTTCTTGTGATCAAAGTCCACGT +
Preference number: 6 (lower is better)
Translates to: KISCCRLDPQSC*ICLLSCDQSPR
Trigger: ACGTGGACTTTGATCACAAGAAAGCAGACAGATCAAACAGCTCTGAGGATCCAGCCGGCAGCAAGAGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS TCA 72 bp AGGATGCATTTGCAGAAACGGAAGAGAAGTACCAAATaGTGGATAACGGAAGGTTTCCAGCAGATCGGGACA +
Preference number: 6 (lower is better)
Translates to: RMHLQKRKRSTK*WITEGFQQIGT
Trigger: TGTCCCGATCTGCTGGAAACCTTCCGTTATCCATCATTTGGTACTTCTCTTCCGTTTCTGCAAATGCATCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS GCA 72 bp AGAGATTTTACAGTGACTGAAATCTTCTGGGTTGACTaGAAACCTTTGGCCTGGTTCTGGAGTCTCTCTGAC +
Preference number: 6 (lower is better)
Translates to: RDFTVTEIFWVD*KPLAWFWSLSD
Trigger: GTCAGAGAGACTCCAGAACCAGGCCAAAGGTTTGCAGTCAACCCAGAAGATTTCAGTCACTGTAAAATCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2
CDS TCA 72 bp GCTTCCTGTGGGCCTGAGTTTCAATTCTGTGAGTCCTaGAGTCTTTCTTTCAAGCTTTTGCCAAGTGTCATT +
Preference number: 6 (lower is better)
Translates to: ASCGPEFQFCES*SLSFKLLPSVI
Trigger: AATGACACTTGGCAAAAGCTTGAAAGAAAGACTTCAGGACTCACAGAATTGAAACTCAGGCCCACAGGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000147399.9
ENSMUST00000167086.2