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Pregenerated sensors for CCT8L1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000038044

Ensembl transcript IDs: ENSMUST00000045016.9

Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp CGCAGTATCTCCAAATTCCTTCCTGTAAACCTTGTGGCACTTCCCTaGCTCCAGGGGAGGAAGGACCCGGCCGAGCAGAGGAGTGCCCAG +
Preference number: 5 (lower is better)
Translates to: RSISKFLPVNLVALP*LQGRKDPAEQRSAQ
Trigger: CTGGGCACTCCTCTGCTCGGCCGGGTCCTTCCTCCCCTGGAGCCAGGGAAGTGCCACAAGGTTTACAGGAAGGAATTTGGAGATACTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045016.9
CDS TCA 72 bp CCTGGCTTCAGCCGCTGGGGAAGTTCTAGGTCTGATTaGACTTTGGTTTGTGTGGCCCGGGAGGGTGGGGAG +
Preference number: 6 (lower is better)
Translates to: PGFSRWGSSRSD*TLVCVAREGGE
Trigger: CTCCCCACCCTCCCGGGCCACACAAACCAAAGTTCAATCAGACCTAGAACTTCCCCAGCGGCTGAAGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045016.9
CDS CCA 72 bp TCAGCCGCTGGGGAAGTTCTAGGTCTGATTGAACTTTaGTTTGTGTGGCCCGGGAGGGTGGGGAGACCGCCA +
Preference number: 6 (lower is better)
Translates to: SAAGEVLGLIEL*FVWPGRVGRPP
Trigger: TGGCGGTCTCCCCACCCTCCCGGGCCACACAAACCAAAGTTCAATCAGACCTAGAACTTCCCCAGCGGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045016.9
CDS CCA 72 bp TCCAAATTCCTTCCTGTAAACCTTGTGGCACTTCCCTaGCTCCAGGGGAGGAAGGACCCGGCCGAGCAGAGG +
Preference number: 6 (lower is better)
Translates to: SKFLPVNLVALP*LQGRKDPAEQR
Trigger: CCTCTGCTCGGCCGGGTCCTTCCTCCCCTGGAGCCAGGGAAGTGCCACAAGGTTTACAGGAAGGAATTTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045016.9
CDS CAA 90 bp GACCGTTGGGGCCAGACAGTCGGCTTCCTTTGTCTACCAGCATTTTaGCCAGAGCCATCTCTGTGGCACCTGCTCCTGGCAGTAGTCTGG +
Preference number: 6 (lower is better)
Translates to: DRWGQTVGFLCLPAF*PEPSLWHLLLAVVW
Trigger: CCAGACTACTGCCAGGAGCAGGTGCCACAGAGATGGCTCTGGCAAAAATGCTGGTAGACAAAGGAAGCCGACTGTCTGGCCCCAACGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045016.9
CDS GCA 72 bp CAGGGTTTTAGGCAGAGAACTCAGGGCTTGAGCAAATaGTTGGAAGGCCAGACCGTTGGGGCCAGACAGTCG +
Preference number: 6 (lower is better)
Translates to: QGFRQRTQGLSK*LEGQTVGARQS
Trigger: CGACTGTCTGGCCCCAACGGTCTGGCCTTCCAAGCATTTGCTCAAGCCCTGAGTTCTCTGCCTAAAACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045016.9
CDS CCA 72 bp TCAGGGCTTGAGCAAATGCTTGGAAGGCCAGACCGTTaGGGCCAGACAGTCGGCTTCCTTTGTCTACCAGCA +
Preference number: 6 (lower is better)
Translates to: SGLEQMLGRPDR*GQTVGFLCLPA
Trigger: TGCTGGTAGACAAAGGAAGCCGACTGTCTGGCCCCAACGGTCTGGCCTTCCAAGCATTTGCTCAAGCCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045016.9
CDS TCA 72 bp TTCTCTGCCAGGGTTTTAGGCAGAGAACTCAGGGCTTaGGCAAATGCTTGGAAGGCCAGACCGTTGGGGCCA +
Preference number: 6 (lower is better)
Translates to: FSARVLGRELRA*ANAWKARPLGP
Trigger: TGGCCCCAACGGTCTGGCCTTCCAAGCATTTGCTCAAGCCCTGAGTTCTCTGCCTAAAACCCTGGCAGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045016.9
CDS GCA 72 bp CTGGCCACTATAATTTGGTCCACAGTCACCAGCTGCTaGACCAGCTCAGCAACTGCTTGTAACCCTTGGGCT +
Preference number: 6 (lower is better)
Translates to: LATIIWSTVTSC*TSSATACNPWA
Trigger: AGCCCAAGGGTTACAAGCAGTTGCTGAGCTGGTGCAGCAGCTGGTGACTGTGGACCAAATTATAGTGGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045016.9
CDS GCA 72 bp AGAAAATGCATCAATGCCATAGTAGACAGCCTGCTCTaGAACCCGAAGTCCCTGGATGGTGGGTCCCCTAAG +
Preference number: 6 (lower is better)
Translates to: RKCINAIVDSLL*NPKSLDGGSPK
Trigger: CTTAGGGGACCCACCATCCAGGGACTTCGGGTTGCAGAGCAGGCTGTCTACTATGGCATTGATGCATTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045016.9
CDS TCA 72 bp CCGAAGTCCCTGGATGGTGGGTCCCCTAAGGACCACTaGGAGAAAAGGTGCAATCTCATGTTCCCATTCAAA +
Preference number: 6 (lower is better)
Translates to: PKSLDGGSPKDH*EKRCNLMFPFK
Trigger: TTTGAATGGGAACATGAGATTGCACCTTTTCTCTCAGTGGTCCTTAGGGGACCCACCATCCAGGGACTTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045016.9
CDS GCA 72 bp TTTCTGGCCACTATAATTTGGTCCACAGTCACCAGCTaGTGCACCAGCTCAGCAACTGCTTGTAACCCTTGG +
Preference number: 6 (lower is better)
Translates to: FLATIIWSTVTS*CTSSATACNPW
Trigger: CCAAGGGTTACAAGCAGTTGCTGAGCTGGTGCAGCAGCTGGTGACTGTGGACCAAATTATAGTGGCCAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045016.9
CDS CCA 72 bp AGCTGCTGCACCAGCTCAGCAACTGCTTGTAACCCTTaGGCTTTGGTCCTCAGTATGTCCCATATACCTTCA +
Preference number: 6 (lower is better)
Translates to: SCCTSSATACNP*ALVLSMSHIPS
Trigger: TGAAGGTATATGGGACATACTGAGGACCAAAGCCCAAGGGTTACAAGCAGTTGCTGAGCTGGTGCAGCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045016.9
CDS CAA 72 bp GCCGTCTGTTCCCACTCCAACGAAGAAGTTCCCAGCTaGGTGAAATCCACTCAATTCTGCCATCACGCTTTG +
Preference number: 6 (lower is better)
Translates to: AVCSHSNEEVPS*VKSTQFCHHAL
Trigger: CAAAGCGTGATGGCAGAATTGAGTGGATTTCACCAAGCTGGGAACTTCTTCGTTGGAGTGGGAACAGACGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045016.9
CDS CAA 72 bp CTGTCTGTACAAAGGAGTCTTTCTGGCCACTATAATTaGGTCCACAGTCACCAGCTGCTGCACCAGCTCAGC +
Preference number: 6 (lower is better)
Translates to: LSVQRSLSGHYN*VHSHQLLHQLS
Trigger: GCTGAGCTGGTGCAGCAGCTGGTGACTGTGGACCAAATTATAGTGGCCAGAAAGACTCCTTTGTACAGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045016.9
CDS CAA 90 bp GTCTGTGATCTGTCTGTACAAAGGAGTCTTTCTGGCCACTATAATTaGGTCCACAGTCACCAGCTGCTGCACCAGCTCAGCAACTGCTTG +
Preference number: 6 (lower is better)
Translates to: VCDLSVQRSLSGHYN*VHSHQLLHQLSNCL
Trigger: CAAGCAGTTGCTGAGCTGGTGCAGCAGCTGGTGACTGTGGACCAAATTATAGTGGCCAGAAAGACTCCTTTGTACAGACAGATCACAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045016.9
CDS TCA 72 bp TCTGTTCCCACTCCAACGAAGAAGTTCCCAGCTTGGTaGAATCCACTCAATTCTGCCATCACGCTTTGGGCA +
Preference number: 6 (lower is better)
Translates to: SVPTPTKKFPAW*NPLNSAITLWA
Trigger: TGCCCAAAGCGTGATGGCAGAATTGAGTGGATTTCACCAAGCTGGGAACTTCTTCGTTGGAGTGGGAACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045016.9
CDS TCA 72 bp GGGGTGAGGATACCTTTGCATTCAAGGTGGGGTCTGTaGTCTGTCTGTACAAAGGAGTCTTTCTGGCCACTA +
Preference number: 6 (lower is better)
Translates to: GVRIPLHSRWGL*SVCTKESFWPL
Trigger: TAGTGGCCAGAAAGACTCCTTTGTACAGACAGATCACAGACCCCACCTTGAATGCAAAGGTATCCTCACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045016.9
CDS CCA 72 bp TGTCTGTACAAAGGAGTCTTTCTGGCCACTATAATTTaGTCCACAGTCACCAGCTGCTGCACCAGCTCAGCA +
Preference number: 6 (lower is better)
Translates to: CLYKGVFLATII*STVTSCCTSSA
Trigger: TGCTGAGCTGGTGCAGCAGCTGGTGACTGTGGACCAAATTATAGTGGCCAGAAAGACTCCTTTGTACAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045016.9