Pregenerated sensors for CCT8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025613Ensembl transcript IDs: ENSMUST00000026704.14, ENSMUST00000177376.8
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACTATTCTAGTGCTGAGATTAGGATTGGGAGCAATGTGAAATCTTaGTGTCAGTGTGTGCGCATAAACTCTGGCCCAGCCACTATTGAA | + |
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Preference number: 1 (lower is better) Translates to: HYSSAEIRIGSNVKS*CQCVRINSGPATIE Trigger: TTCAATAGTGGCTGGGCCAGAGTTTATGCGCACACACTGACACCAAGATTTCACATTGCTCCCAATCCTAATCTCAGCACTAGAATAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026704.14 |
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| 3UTR-3UTR TCA 90 bp | GTCCCATTTCTTCTTGGACGGGAGGAGTCAATTTTGGAAGAGCTGTGGCACCAATCTGAGATCCCACTTTaGGTTCAGTCTCACCAACAT | + |
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Preference number: 2 (lower is better) Translates to: VPFLLGREESILEELWHQSEIPL*VQSHQH Trigger: ATGTTGGTGAGACTGAACTCAAAGTGGGATCTCAGA...TTGGTGCCACAGCTCTTCCAAAATTGACTCCTCCCGTCCAAGAAGAAATGGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177376.8 |
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| 3UTR-3UTR CCA 90 bp | ACTACTGGCAACACCATGTTTCACTATTCTAGTGCTGAGATTAGGATTGGGAGCTCAAGGCCATGGGATTaGGGGAACAACTTTGGAAAT | + |
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Preference number: 2 (lower is better) Translates to: TTGNTMFHYSSAEIRIGSSRPWD*GNNFGN Trigger: ATTTCCAAAGTTGTTCCCCCAATCCCATGGCCTTGA...GCTCCCAATCCTAATCTCAGCACTAGAATAGTGAAACATGGTGTTGCCAGTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026704.14 |
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| 3UTR-3UTR CAA 90 bp | GTCCCATTTCTTCTTGGACGGGAGGAGTCAATTTTGGAAGAGCTGTGGCACCAATCAGCACGGTCCCCTTaGTCTCTGTTATCATGCCAT | + |
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Preference number: 3 (lower is better) Translates to: VPFLLGREESILEELWHQSARSP*SLLSCH Trigger: ATGGCATGATAACAGAGACAAAGGGGACCGTGCTGA...TTGGTGCCACAGCTCTTCCAAAATTGACTCCTCCCGTCCAAGAAGAAATGGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177376.8 |
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| 3UTR CCA 72 bp | AGTGCTGAGATTAGGATTGGGAGCAATGTGAAATCTTaGTGTCAGTGTGTGCGCATAAACTCTGGCCCAGCC | + |
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Preference number: 3 (lower is better) Translates to: SAEIRIGSNVKS*CQCVRINSGPA Trigger: GGCTGGGCCAGAGTTTATGCGCACACACTGACACCAAGATTTCACATTGCTCCCAATCCTAATCTCAGCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026704.14 |
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| 3UTR TCA 72 bp | AAATTGCCAGAATCAGGAAAGATAGAAACACAAGCCTaGGCAATAAGCTTGGCCAAAAACGTCTCGCTGCCG | + |
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Preference number: 3 (lower is better) Translates to: KLPESGKIETQA*AISLAKNVSLP Trigger: CGGCAGCGAGACGTTTTTGGCCAAGCTTATTGCTCAGGCTTGTGTTTCTATCTTTCCTGATTCTGGCAATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177376.8 |
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| 3UTR TCA 72 bp | ACCAACTGTTTTACAGAGTCGTCTGAGATCCCACTTTaGGTTCAGTCTCACCAACATGATATTGTACTTGTT | + |
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Preference number: 3 (lower is better) Translates to: TNCFTESSEIPL*VQSHQHDIVLV Trigger: AACAAGTACAATATCATGTTGGTGAGACTGAACTCAAAGTGGGATCTCAGACGACTCTGTAAAACAGTTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177376.8 |
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| 3UTR-3UTR CAA 90 bp | AGTGTCTTTCCCAATAGATATGGTCAAGTATACAATGAGAACAGTCATGTGAGTACAGTAACACATTTATaGTACCACCCAGCAGAGTAC | + |
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Preference number: 3 (lower is better) Translates to: SVFPNRYGQVYNENSHVSTVTHL*YHPAEY Trigger: GTACTCTGCTGGGTGGTACAATAAATGTGTTACTGT...ACTCACATGACTGTTCTCATTGTATACTTGACCATATCTATTGGGAAAGACACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026704.14 |
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| 3UTR TCA 72 bp | ATAGATATGGTCAAGTATACAATGAGAACAGTCATGTaGGTGATTAAACAGACGGCCATAACAGTAACACAT | + |
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Preference number: 3 (lower is better) Translates to: IDMVKYTMRTVM*VIKQTAITVTH Trigger: ATGTGTTACTGTTATGGCCGTCTGTTTAATCACTCACATGACTGTTCTCATTGTATACTTGACCATATCTAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026704.14 |
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| 3UTR TCA 72 bp | TTTTTATTCCTTCTAGTTTCAACTTTAGGAAGGATTTaGATAACTAAGTTCTGTGCTTACTCTGACTGGGTG | + |
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Preference number: 3 (lower is better) Translates to: FLFLLVSTLGRI*ITKFCAYSDWV Trigger: CACCCAGTCAGAGTAAGCACAGAACTTAGTTATTCAAATCCTTCCTAAAGTTGAAACTAGAAGGAATAAAAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026704.14 |
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| CDS-3UTR TCA 90 bp | GCAATAAGCTTGGCCAAAAACGTCTCGCTGCCGTACTGCTTACTCATGATGGAGGTTTGGCTCCATCCTTaGGCATCTGGGCAAAGCCCG | + |
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Preference number: 4 (lower is better) Translates to: AISLAKNVSLPYCLLMMEVWLHP*ASGQSP Trigger: CGGGCTTTGCCCAGATGCTCAAGGATGGAGCCAAAC...CTCCATCATGAGTAAGCAGTACGGCAGCGAGACGTTTTTGGCCAAGCTTATTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177376.8 |
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| CDS-3UTR GCA 90 bp | GTCCCATTTCTTCTTGGACGGGAGGAGTCAATTTTGGAAGAGCTGTGGCACCAATTTGCAGCAGGATGCTaGACCATTTGGTCCGTACGC | + |
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Preference number: 4 (lower is better) Translates to: VPFLLGREESILEELWHQFAAGC*TIWSVR Trigger: GCGTACGGACCAAATGGTGCAGCATCCTGCTGCAAA...TTGGTGCCACAGCTCTTCCAAAATTGACTCCTCCCGTCCAAGAAGAAATGGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177376.8 |
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| CDS-3UTR GCA 90 bp | GTCCCATTTCTTCTTGGACGGGAGGAGTCAATTTTGGAAGAGCTGTGGCACCAACATCACTATCATCTTTaGAGCAGGATGCTGCACCAT | + |
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Preference number: 4 (lower is better) Translates to: VPFLLGREESILEELWHQHHYHL*SRMLHH Trigger: ATGGTGCAGCATCCTGCTGCAAAGATGATAGTGATG...TTGGTGCCACAGCTCTTCCAAAATTGACTCCTCCCGTCCAAGAAGAAATGGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177376.8 |
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| CDS-3UTR TCA 90 bp | GTCCCATTTCTTCTTGGACGGGAGGAGTCAATTTTGGAAGAGCTGTGGCACCAATCTTGTTCTTGCATATaGGAGGCCATCACTATCATC | + |
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Preference number: 4 (lower is better) Translates to: VPFLLGREESILEELWHQSCSCI*EAITII Trigger: GATGATAGTGATGGCCTCTCATATGCAAGAACAAGA...TTGGTGCCACAGCTCTTCCAAAATTGACTCCTCCCGTCCAAGAAGAAATGGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177376.8 |
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| CDS-3UTR GCA 90 bp | AGGATTGGGAGCAATGTGAAATCTTGGTGTCAGTGTGTGCGCATAAACTCTGGCAGAATTTTCTGCCAGTaGCCGTGGAATCGCTTCAAA | + |
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Preference number: 4 (lower is better) Translates to: RIGSNVKSWCQCVRINSGRIFCQ*PWNRFK Trigger: TTTGAAGCGATTCCACGGGCACTGGCAGAAAATTCT...GCCAGAGTTTATGCGCACACACTGACACCAAGATTTCACATTGCTCCCAATCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026704.14 |
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| CDS-3UTR TCA 90 bp | AGTGTCTTTCCCAATAGATATGGTCAAGTATACAATGAGAACAGTCATGTGAGTGTTTGGCTCCATCCTTaGGCATCTGGGCAAAGCCCG | + |
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Preference number: 4 (lower is better) Translates to: SVFPNRYGQVYNENSHVSVWLHP*ASGQSP Trigger: CGGGCTTTGCCCAGATGCTCAAGGATGGAGCCAAAC...ACTCACATGACTGTTCTCATTGTATACTTGACCATATCTATTGGGAAAGACACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026704.14 |
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| CDS-3UTR TCA 90 bp | AGGATTGGGAGCAATGTGAAATCTTGGTGTCAGTGTGTGCGCATAAACTCTGGCTCTTGTTCTTGCATATaGGAGGCCATCACTATCATC | + |
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Preference number: 4 (lower is better) Translates to: RIGSNVKSWCQCVRINSGSCSCI*EAITII Trigger: GATGATAGTGATGGCCTCTCATATGCAAGAACAAGA...GCCAGAGTTTATGCGCACACACTGACACCAAGATTTCACATTGCTCCCAATCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026704.14 |
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| CDS-3UTR GCA 90 bp | GTACCCACTACTGGCAACACCATGTTTCACTATTCTAGTGCTGAGATTAGGATTCCCACCAGCTGGTTTTaGCATGATGATCTGATCCAC | + |
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Preference number: 4 (lower is better) Translates to: VPTTGNTMFHYSSAEIRIPTSWF*HDDLIH Trigger: GTGGATCAGATCATCATGGCAAAACCAGCTGGTGGG...AATCCTAATCTCAGCACTAGAATAGTGAAACATGGTGTTGCCAGTAGTGGGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026704.14 |
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| CDS-3UTR CCA 90 bp | GTACCCACTACTGGCAACACCATGTTTCACTATTCTAGTGCTGAGATTAGGATTGGGAGGAGTCAATTTTaGAAGAGCTGTGGCACCAAC | + |
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Preference number: 4 (lower is better) Translates to: VPTTGNTMFHYSSAEIRIGRSQF*KSCGTN Trigger: GTTGGTGCCACAGCTCTTCCAAAATTGACTCCTCCC...AATCCTAATCTCAGCACTAGAATAGTGAAACATGGTGTTGCCAGTAGTGGGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026704.14 |
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| CDS-3UTR GCA 90 bp | ACTACTGGCAACACCATGTTTCACTATTCTAGTGCTGAGATTAGGATTGGGAGCATCTTTGCAGCAGGATaGTGCACTTCTAGCTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: TTGNTMFHYSSAEIRIGSIFAAG*CTSSSL Trigger: AAGAGAGCTAGAAGTGCAGCATCCTGCTGCAAAGAT...GCTCCCAATCCTAATCTCAGCACTAGAATAGTGAAACATGGTGTTGCCAGTAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026704.14 |
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| CDS-3UTR GCA 90 bp | GAGATTAGGATTGGGAGCAATGTGAAATCTTGGTGTCAGTGTGTGCGCATAAACTGTTACTATGACATTTaGACCAGTGCCTGCAATGGC | + |
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Preference number: 4 (lower is better) Translates to: EIRIGSNVKSWCQCVRINCYYDI*TSACNG Trigger: GCCATTGCAGGCACTGGTGCAAATGTCATAGTAACA...GTTTATGCGCACACACTGACACCAAGATTTCACATTGCTCCCAATCCTAATCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026704.14 |
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| CDS-3UTR TCA 90 bp | AGTGTCTTTCCCAATAGATATGGTCAAGTATACAATGAGAACAGTCATGTGAGTTCACCTGAGCATCCATaGGGTTCTCCTCTCCCTTAC | + |
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Preference number: 4 (lower is better) Translates to: SVFPNRYGQVYNENSHVSSPEHP*GSPLPY Trigger: GTAAGGGAGAGGAGAACCTCATGGATGCTCAGGTGA...ACTCACATGACTGTTCTCATTGTATACTTGACCATATCTATTGGGAAAGACACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026704.14 |
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| CDS-3UTR TCA 90 bp | GTACCCACTACTGGCAACACCATGTTTCACTATTCTAGTGCTGAGATTAGGATTTCTGAGATCCCACTTTaGGTTCAGTCTCACCAACAT | + |
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Preference number: 4 (lower is better) Translates to: VPTTGNTMFHYSSAEIRISEIPL*VQSHQH Trigger: ATGTTGGTGAGACTGAACTCAAAGTGGGATCTCAGA...AATCCTAATCTCAGCACTAGAATAGTGAAACATGGTGTTGCCAGTAGTGGGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026704.14 |
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| CDS-3UTR TCA 90 bp | ACTACTGGCAACACCATGTTTCACTATTCTAGTGCTGAGATTAGGATTGGGAGCTTTTACAGAGTCGTCTaGGATCCCACTTTGAGTTCA | + |
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Preference number: 4 (lower is better) Translates to: TTGNTMFHYSSAEIRIGSFYRVV*DPTLSS Trigger: TGAACTCAAAGTGGGATCTCAGACGACTCTGTAAAA...GCTCCCAATCCTAATCTCAGCACTAGAATAGTGAAACATGGTGTTGCCAGTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026704.14 |
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| CDS-3UTR TCA 90 bp | ACTACTGGCAACACCATGTTTCACTATTCTAGTGCTGAGATTAGGATTGGGAGCTTTGCCATGATGATCTaGTCCACTCTTAGTACAGTG | + |
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Preference number: 4 (lower is better) Translates to: TTGNTMFHYSSAEIRIGSFAMMI*STLSTV Trigger: CACTGTACTAAGAGTGGATCAGATCATCATGGCAAA...GCTCCCAATCCTAATCTCAGCACTAGAATAGTGAAACATGGTGTTGCCAGTAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026704.14 |
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| CDS-3UTR GCA 90 bp | CTGTACCCACTACTGGCAACACCATGTTTCACTATTCTAGTGCTGAGATTAGGATTTGCAGCAGGATGCTaGACTTCTAGCTCTCTTAAA | + |
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Preference number: 4 (lower is better) Translates to: LYPLLATPCFTILVLRLGFAAGC*TSSSLK Trigger: TTTAAGAGAGCTAGAAGTGCAGCATCCTGCTGCAAA...TCCTAATCTCAGCACTAGAATAGTGAAACATGGTGTTGCCAGTAGTGGGTACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026704.14 |
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| CDS-3UTR CCA 90 bp | CTGTACCCACTACTGGCAACACCATGTTTCACTATTCTAGTGCTGAGATTAGGATGTCCCATTTCTTCTTaGACGGGAGGAGTCAATTTT | + |
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Preference number: 4 (lower is better) Translates to: LYPLLATPCFTILVLRLGCPISS*TGGVNF Trigger: AAAATTGACTCCTCCCGTCCAAGAAGAAATGGGACA...TCCTAATCTCAGCACTAGAATAGTGAAACATGGTGTTGCCAGTAGTGGGTACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026704.14 |
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| CDS-3UTR TCA 90 bp | TCAAGGCCATGGGATTGGGGGAACAACTTTGGAAATGAGATAAACAACAGACTAATAGAAACACAAGCCTaGGCAATAAGCTTGGCCAAA | + |
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Preference number: 4 (lower is better) Translates to: SRPWDWGNNFGNEINNRLIETQA*AISLAK Trigger: TTTGGCCAAGCTTATTGCTCAGGCTTGTGTTTCTAT...TAGTCTGTTGTTTATCTCATTTCCAAAGTTGTTCCCCCAATCCCATGGCCTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026704.14 |
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| CDS-3UTR TCA 90 bp | GAGATTAGGATTGGGAGCAATGTGAAATCTTGGTGTCAGTGTGTGCGCATAAACACACGTCTCTCCATATaGTGTGATTTGTTTAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: EIRIGSNVKSWCQCVRINTRLSI*CDLFSQ Trigger: TTGGCTAAACAAATCACATCATATGGAGAGACGTGT...GTTTATGCGCACACACTGACACCAAGATTTCACATTGCTCCCAATCCTAATCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026704.14 |
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| CDS-3UTR CCA 90 bp | AGTGTCTTTCCCAATAGATATGGTCAAGTATACAATGAGAACAGTCATGTGAGTTTTATTCATTCCATTTaGTCCGTACGCTGTGCGAGT | + |
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Preference number: 4 (lower is better) Translates to: SVFPNRYGQVYNENSHVSFIHSI*SVRCAS Trigger: ACTCGCACAGCGTACGGACCAAATGGAATGAATAAA...ACTCACATGACTGTTCTCATTGTATACTTGACCATATCTATTGGGAAAGACACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026704.14 |
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| CDS-3UTR CAA 90 bp | AGGATTGGGAGCAATGTGAAATCTTGGTGTCAGTGTGTGCGCATAAACTCTGGCTCAGCACGGTCCCCTTaGTCTCTGTTATCATGCCAT | + |
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Preference number: 5 (lower is better) Translates to: RIGSNVKSWCQCVRINSGSARSP*SLLSCH Trigger: ATGGCATGATAACAGAGACAAAGGGGACCGTGCTGA...GCCAGAGTTTATGCGCACACACTGACACCAAGATTTCACATTGCTCCCAATCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026704.14 |
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| CDS-3UTR CAA 90 bp | CTGAGCAATAAGCTTGGCCAAAAACGTCTCGCTGCCGTACTGCTTACTCATGATACCAACCTCTTGTTCTaGCATATGAGAGGCCATCAC | + |
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Preference number: 5 (lower is better) Translates to: LSNKLGQKRLAAVLLTHDTNLLF*HMRGHH Trigger: GTGATGGCCTCTCATATGCAAGAACAAGAGGTTGGT...ATCATGAGTAAGCAGTACGGCAGCGAGACGTTTTTGGCCAAGCTTATTGCTCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177376.8 |
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| CDS-3UTR CAA 90 bp | CTGTACCCACTACTGGCAACACCATGTTTCACTATTCTAGTGCTGAGATTAGGACGGGAGGAGTCAATTTaGGAAGAGCTGTGGCACCAA | + |
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Preference number: 5 (lower is better) Translates to: LYPLLATPCFTILVLRLGREESI*EELWHQ Trigger: TTGGTGCCACAGCTCTTCCAAAATTGACTCCTCCCG...TCCTAATCTCAGCACTAGAATAGTGAAACATGGTGTTGCCAGTAGTGGGTACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026704.14 |
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| CDS-3UTR CAA 90 bp | CTGTACCCACTACTGGCAACACCATGTTTCACTATTCTAGTGCTGAGATTAGGATTTTATTCATTCCATTaGGTCCGTACGCTGTGCGAG | + |
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Preference number: 5 (lower is better) Translates to: LYPLLATPCFTILVLRLGFYSFH*VRTLCE Trigger: CTCGCACAGCGTACGGACCAAATGGAATGAATAAAA...TCCTAATCTCAGCACTAGAATAGTGAAACATGGTGTTGCCAGTAGTGGGTACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026704.14 |
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| CDS-3UTR CAA 90 bp | TCAAGGCCATGGGATTGGGGGAACAACTTTGGAAATGAGATAAACAACAGACTAACCAACCTCTTGTTCTaGCATATGAGAGGCCATCAC | + |
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Preference number: 5 (lower is better) Translates to: SRPWDWGNNFGNEINNRLTNLLF*HMRGHH Trigger: GTGATGGCCTCTCATATGCAAGAACAAGAGGTTGGT...TAGTCTGTTGTTTATCTCATTTCCAAAGTTGTTCCCCCAATCCCATGGCCTTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026704.14 |
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| CDS-3UTR CAA 90 bp | GAGATTAGGATTGGGAGCAATGTGAAATCTTGGTGTCAGTGTGTGCGCATAAACTCCAACCCCACATTTTaGTTTCCTTCTTGGTGTACG | + |
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Preference number: 5 (lower is better) Translates to: EIRIGSNVKSWCQCVRINSNPTF*FPSWCT Trigger: CGTACACCAAGAAGGAAACAAAAATGTGGGGTTGGA...GTTTATGCGCACACACTGACACCAAGATTTCACATTGCTCCCAATCCTAATCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026704.14 |
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| CDS CCA 72 bp | ATCACTATCATCTTTGCAGCAGGATGCTGCACCATTTaGTCCGTACGCTGTGCGAGTAGTCTGAGCAAGCTC | + |
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Preference number: 6 (lower is better) Translates to: ITIIFAAGCCTI*SVRCASSLSKL Trigger: GAGCTTGCTCAGACTACTCGCACAGCGTACGGACCAAATGGTGCAGCATCCTGCTGCAAAGATGATAGTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177376.8 |
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