Pregenerated sensors for CCT2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034024Ensembl transcript IDs: ENSMUST00000047672.9, ENSMUST00000218059.2, ENSMUST00000218719.2, ENSMUST00000219036.2, ENSMUST00000219573.2, ENSMUST00000219690.2
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CAGCTAATGTTCAAACTTAAGGCTATCATGGACAGGTCAATTCCACCAGTCTTCTTCCAAGTACAACTTTaGTATGAACTGGCCCAGAGT | + |
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Preference number: 2 (lower is better) Translates to: QLMFKLKAIMDRSIPPVFFQVQL*YELAQS Trigger: ACTCTGGGCCAGTTCATAGCAAAGTTGTACTTGGAA...GAAGACTGGTGGAATTGACCTGTCCATGATAGCCTTAAGTTTGAACATTAGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047672.9 ENSMUST00000219690.2 |
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| CDS-3UTR GCA 90 bp | CAGCTAATGTTCAAACTTAAGGCTATCATGGACAGGTCAATTCCACCAGTCTTCAGCAGCTCGGAGCTGTaGCACCAGATCTGCACTGTC | + |
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Preference number: 4 (lower is better) Translates to: QLMFKLKAIMDRSIPPVFSSSEL*HQICTV Trigger: GACAGTGCAGATCTGGTGGCACAGCTCCGAGCTGCT...GAAGACTGGTGGAATTGACCTGTCCATGATAGCCTTAAGTTTGAACATTAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047672.9 ENSMUST00000219690.2 |
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| CDS-3UTR TCA 90 bp | GGTCAATTCCACCAGTCTTCTTTAAAGGTTGAAGTCTTCCAAGTACAACTTTGCCAGAGCCTTTCAGTCTaGGAACCGCTTCCACGGCCA | + |
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Preference number: 4 (lower is better) Translates to: GQFHQSSLKVEVFQVQLCQSLSV*EPLPRP Trigger: TGGCCGTGGAAGCGGTTCTCAGACTGAAAGGCTCTG...GCAAAGTTGTACTTGGAAGACTTCAACCTTTAAAGAAGACTGGTGGAATTGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047672.9 |
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| CDS-3UTR GCA 90 bp | CAGCTAATGTTCAAACTTAAGGCTATCATGGACAGGTCAATTCCACCAGTCTTCCAGCAGGGCCTCTCTTaGTGCCTTTGTGGCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QLMFKLKAIMDRSIPPVFQQGLS*CLCGFS Trigger: AGAGAAGCCACAAAGGCAGCAAGAGAGGCCCTGCTG...GAAGACTGGTGGAATTGACCTGTCCATGATAGCCTTAAGTTTGAACATTAGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047672.9 |
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| CDS-3UTR GCA 90 bp | CAGCTAATGTTCAAACTTAAGGCTATCATGGACAGGTCAATTCCACCAGTCTTCGAGGCGCTCCACACCTaGGAAATCCGCATGCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: QLMFKLKAIMDRSIPPVFEALHT*EIRMLN Trigger: ATTGAGCATGCGGATTTCGCAGGTGTGGAGCGCCTC...GAAGACTGGTGGAATTGACCTGTCCATGATAGCCTTAAGTTTGAACATTAGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047672.9 |
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| CDS-3UTR GCA 90 bp | GGTCAATTCCACCAGTCTTCTTTAAAGGTTGAAGTCTTCCAAGTACAACTTTGCAGCAGCTCGGAGCTGTaGCACCAGATCTGCACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GQFHQSSLKVEVFQVQLCSSSEL*HQICTV Trigger: GACAGTGCAGATCTGGTGGCACAGCTCCGAGCTGCT...GCAAAGTTGTACTTGGAAGACTTCAACCTTTAAAGAAGACTGGTGGAATTGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047672.9 ENSMUST00000219690.2 |
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| CDS-3UTR GCA 90 bp | CAGCTAATGTTCAAACTTAAGGCTATCATGGACAGGTCAATTCCACCAGTCTTCCAGGATCACCTCTGCTaGTTCAGCCGCACTCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QLMFKLKAIMDRSIPPVFQDHLC*FSRTQK Trigger: CTTCTGAGTGCGGCTGAAGCAGCAGAGGTGATCCTG...GAAGACTGGTGGAATTGACCTGTCCATGATAGCCTTAAGTTTGAACATTAGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047672.9 ENSMUST00000219690.2 |
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| CDS-3UTR GCA 90 bp | GGTCAATTCCACCAGTCTTCTTTAAAGGTTGAAGTCTTCCAAGTACAACTTTGCCAGGGCCTCTCTTGCTaGCTTTGTGGCTTCTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GQFHQSSLKVEVFQVQLCQGLSC*LCGFSP Trigger: TGGAGAGAAGCCACAAAGGCAGCAAGAGAGGCCCTG...GCAAAGTTGTACTTGGAAGACTTCAACCTTTAAAGAAGACTGGTGGAATTGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047672.9 |
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| CDS-3UTR GCA 90 bp | CAGCTAATGTTCAAACTTAAGGCTATCATGGACAGGTCAATTCCACCAGTCTTCCCTGCGAAATCCGCATaGTCAATAGCCATGACGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QLMFKLKAIMDRSIPPVFPAKSA*SIAMTP Trigger: TGGCGTCATGGCTATTGAGCATGCGGATTTCGCAGG...GAAGACTGGTGGAATTGACCTGTCCATGATAGCCTTAAGTTTGAACATTAGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047672.9 |
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| CDS-3UTR GCA 90 bp | CAGCTAATGTTCAAACTTAAGGCTATCATGGACAGGTCAATTCCACCAGTCTTCCTGTGCCACCAGATCTaGACTGTCATAGCCCGCATT | + |
|
Preference number: 4 (lower is better) Translates to: QLMFKLKAIMDRSIPPVFLCHQI*TVIARI Trigger: AATGCGGGCTATGACAGTGCAGATCTGGTGGCACAG...GAAGACTGGTGGAATTGACCTGTCCATGATAGCCTTAAGTTTGAACATTAGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047672.9 ENSMUST00000219690.2 |
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| CDS-3UTR GCA 90 bp | GGTCAATTCCACCAGTCTTCTTTAAAGGTTGAAGTCTTCCAAGTACAACTTTGCCAGGATCACCTCTGCTaGTTCAGCCGCACTCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GQFHQSSLKVEVFQVQLCQDHLC*FSRTQK Trigger: CTTCTGAGTGCGGCTGAAGCAGCAGAGGTGATCCTG...GCAAAGTTGTACTTGGAAGACTTCAACCTTTAAAGAAGACTGGTGGAATTGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047672.9 ENSMUST00000219690.2 |
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| CDS-3UTR GCA 90 bp | CAGCTAATGTTCAAACTTAAGGCTATCATGGACAGGTCAATTCCACCAGTCTTCGGAGAATTTTGTCCATaGCCTTCGGTCCCAAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QLMFKLKAIMDRSIPPVFGEFCP*PSVPKC Trigger: GCACTTTGGGACCGAAGGGCATGGACAAAATTCTCC...GAAGACTGGTGGAATTGACCTGTCCATGATAGCCTTAAGTTTGAACATTAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047672.9 |
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| CDS-3UTR GCA 90 bp | GGTCAATTCCACCAGTCTTCTTTAAAGGTTGAAGTCTTCCAAGTACAACTTTGCCACGAAGCACAATGGTaGATGCCTCACCAAGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GQFHQSSLKVEVFQVQLCHEAQW*MPHQGQ Trigger: TTGCCCTTGGTGAGGCATGCACCATTGTGCTTCGTG...GCAAAGTTGTACTTGGAAGACTTCAACCTTTAAAGAAGACTGGTGGAATTGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047672.9 |
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| CDS-3UTR GCA 90 bp | GGTCAATTCCACCAGTCTTCTTTAAAGGTTGAAGTCTTCCAAGTACAACTTTGCCTGTGCCACCAGATCTaGACTGTCATAGCCCGCATT | + |
|
Preference number: 4 (lower is better) Translates to: GQFHQSSLKVEVFQVQLCLCHQI*TVIARI Trigger: AATGCGGGCTATGACAGTGCAGATCTGGTGGCACAG...GCAAAGTTGTACTTGGAAGACTTCAACCTTTAAAGAAGACTGGTGGAATTGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047672.9 ENSMUST00000219690.2 |
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| CDS-3UTR CCA 90 bp | GGTCAATTCCACCAGTCTTCTTTAAAGGTTGAAGTCTTCCAAGTACAACTTTGCAGCTGTGTCACAGCATaGGCCATCAGCATCTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GQFHQSSLKVEVFQVQLCSCVTA*AISISE Trigger: CTCTGAGATGCTGATGGCCCATGCTGTGACACAGCT...GCAAAGTTGTACTTGGAAGACTTCAACCTTTAAAGAAGACTGGTGGAATTGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047672.9 |
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| CDS-3UTR CCA 90 bp | CAGCTAATGTTCAAACTTAAGGCTATCATGGACAGGTCAATTCCACCAGTCTTCTTCCTGGGGTTCTGTTaGCAAGCTGTGTCACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QLMFKLKAIMDRSIPPVFFLGFC*QAVSQH Trigger: ATGCTGTGACACAGCTTGCCAACAGAACCCCAGGAA...GAAGACTGGTGGAATTGACCTGTCCATGATAGCCTTAAGTTTGAACATTAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047672.9 |
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| CDS-3UTR GCA 90 bp | GGTCAATTCCACCAGTCTTCTTTAAAGGTTGAAGTCTTCCAAGTACAACTTTGCCGGCGTCTCGTCCACTaGTTAGGAGAATTTTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GQFHQSSLKVEVFQVQLCRRLVH*LGEFCP Trigger: TGGACAAAATTCTCCTAAGCAGTGGACGAGACGCCG...GCAAAGTTGTACTTGGAAGACTTCAACCTTTAAAGAAGACTGGTGGAATTGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047672.9 |
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| CDS-3UTR TCA 90 bp | GGTCAATTCCACCAGTCTTCTTTAAAGGTTGAAGTCTTCCAAGTACAACTTTGCCTCTCCAACCTGAGATaGTGGTCTGTGGATGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: GQFHQSSLKVEVFQVQLCLSNLR*WSVDVS Trigger: AGATACATCCACAGACCATCATCTCAGGTTGGAGAG...GCAAAGTTGTACTTGGAAGACTTCAACCTTTAAAGAAGACTGGTGGAATTGACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047672.9 |
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| CDS-3UTR TCA 90 bp | GGTCAATTCCACCAGTCTTCTTTAAAGGTTGAAGTCTTCCAAGTACAACTTTGCAGTTTCTTGATGACATaGATCGCCTCCAGGTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GQFHQSSLKVEVFQVQLCSFLMT*IASRLP Trigger: TGGCAACCTGGAGGCGATTCATGTCATCAAGAAACT...GCAAAGTTGTACTTGGAAGACTTCAACCTTTAAAGAAGACTGGTGGAATTGACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047672.9 |
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| CDS-3UTR TCA 90 bp | CAGCTAATGTTCAAACTTAAGGCTATCATGGACAGGTCAATTCCACCAGTCTTCTTCACAAGTTCTGGGTaGTCAAAGGTAGAGGCAATC | + |
|
Preference number: 4 (lower is better) Translates to: QLMFKLKAIMDRSIPPVFFTSSG*SKVEAI Trigger: GATTGCCTCTACCTTTGATCACCCAGAACTTGTGAA...GAAGACTGGTGGAATTGACCTGTCCATGATAGCCTTAAGTTTGAACATTAGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047672.9 |
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| CDS-3UTR TCA 90 bp | CAGCTAATGTTCAAACTTAAGGCTATCATGGACAGGTCAATTCCACCAGTCTTCACCTGTCGCTTCACTTaGAAACTCTCTGTTATACCC | + |
|
Preference number: 4 (lower is better) Translates to: QLMFKLKAIMDRSIPPVFTCRFT*KLSVIP Trigger: GGGTATAACAGAGAGTTTTCAAGTGAAGCGACAGGT...GAAGACTGGTGGAATTGACCTGTCCATGATAGCCTTAAGTTTGAACATTAGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047672.9 ENSMUST00000219690.2 |
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| CDS-3UTR GCA 90 bp | CAGCTAATGTTCAAACTTAAGGCTATCATGGACAGGTCAATTCCACCAGTCTTCGAAGATATTAACAGGTaGGAGGGAAAGGGAAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QLMFKLKAIMDRSIPPVFEDINR*EGKGSH Trigger: ATGGCTTCCCTTTCCCTCGCACCTGTTAATATCTTC...GAAGACTGGTGGAATTGACCTGTCCATGATAGCCTTAAGTTTGAACATTAGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047672.9 |
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| CDS-3UTR GCA 90 bp | CAGCTAATGTTCAAACTTAAGGCTATCATGGACAGGTCAATTCCACCAGTCTTCCATTCTCAGGGCTTTTaGAAACGACTCCATTGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: QLMFKLKAIMDRSIPPVFHSQGF*KRLHCY Trigger: GTAGCAATGGAGTCGTTTGCAAAAGCCCTGAGAATG...GAAGACTGGTGGAATTGACCTGTCCATGATAGCCTTAAGTTTGAACATTAGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047672.9 |
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| CDS-3UTR CCA 90 bp | GGTCAATTCCACCAGTCTTCTTTAAAGGTTGAAGTCTTCCAAGTACAACTTTGCTACAGCTTCTTTTCCTaGGGTTCTGTTGGCAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GQFHQSSLKVEVFQVQLCYSFFS*GSVGKL Trigger: CAGCTTGCCAACAGAACCCCAGGAAAAGAAGCTGTA...GCAAAGTTGTACTTGGAAGACTTCAACCTTTAAAGAAGACTGGTGGAATTGACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047672.9 |
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| CDS-3UTR TCA 90 bp | GGTCAATTCCACCAGTCTTCTTTAAAGGTTGAAGTCTTCCAAGTACAACTTTGCACCTGTCGCTTCACTTaGAAACTCTCTGTTATACCC | + |
|
Preference number: 4 (lower is better) Translates to: GQFHQSSLKVEVFQVQLCTCRFT*KLSVIP Trigger: GGGTATAACAGAGAGTTTTCAAGTGAAGCGACAGGT...GCAAAGTTGTACTTGGAAGACTTCAACCTTTAAAGAAGACTGGTGGAATTGACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047672.9 ENSMUST00000219690.2 |
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| CDS-3UTR GCA 90 bp | CAGCTAATGTTCAAACTTAAGGCTATCATGGACAGGTCAATTCCACCAGTCTTCACACAAAGAGCATCATaGAGAGATCGTTCAGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: QLMFKLKAIMDRSIPPVFTQRAS*RDRSAS Trigger: TGAAGCTGAACGATCTCTGCATGATGCTCTTTGTGT...GAAGACTGGTGGAATTGACCTGTCCATGATAGCCTTAAGTTTGAACATTAGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047672.9 |
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| CDS-3UTR GCA 90 bp | GGTCAATTCCACCAGTCTTCTTTAAAGGTTGAAGTCTTCCAAGTACAACTTTGCTGCAAACGACTCCATTaGTACAGCTTCTTTTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: GQFHQSSLKVEVFQVQLCCKRLH*YSFFSW Trigger: CCAGGAAAAGAAGCTGTAGCAATGGAGTCGTTTGCA...GCAAAGTTGTACTTGGAAGACTTCAACCTTTAAAGAAGACTGGTGGAATTGACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047672.9 |
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| CDS-3UTR CCA 90 bp | GGTCAATTCCACCAGTCTTCTTTAAAGGTTGAAGTCTTCCAAGTACAACTTTGCAGTCCTGCCAGAATCTaGCTTCATCAGAACCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: GQFHQSSLKVEVFQVQLCSPARI*LHQNHD Trigger: ATCATGGTTCTGATGAAGCCAGATTCTGGCAGGACT...GCAAAGTTGTACTTGGAAGACTTCAACCTTTAAAGAAGACTGGTGGAATTGACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047672.9 |
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| CDS-3UTR CCA 90 bp | GGTCAATTCCACCAGTCTTCTTTAAAGGTTGAAGTCTTCCAAGTACAACTTTGCAAGCTTCACAAGTTCTaGGTGATCAAAGGTAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GQFHQSSLKVEVFQVQLCKLHKF*VIKGRG Trigger: GCCTCTACCTTTGATCACCCAGAACTTGTGAAGCTT...GCAAAGTTGTACTTGGAAGACTTCAACCTTTAAAGAAGACTGGTGGAATTGACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047672.9 |
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| CDS-3UTR CCA 90 bp | GGTCAATTCCACCAGTCTTCTTTAAAGGTTGAAGTCTTCCAAGTACAACTTTGCGGGGACACGTTTCCTTaGTGCTGCTTTGATAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: GQFHQSSLKVEVFQVQLCGDTFP*CCFDNV Trigger: AACATTATCAAAGCAGCACCAAGGAAACGTGTCCCC...GCAAAGTTGTACTTGGAAGACTTCAACCTTTAAAGAAGACTGGTGGAATTGACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047672.9 |
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| CDS-3UTR TCA 90 bp | GGTCAATTCCACCAGTCTTCTTTAAAGGTTGAAGTCTTCCAAGTACAACTTTGCGGATCTTTTACAGTCTaGGCAAGAACACAAAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: GQFHQSSLKVEVFQVQLCGSFTV*ARTQRA Trigger: TGCTCTTTGTGTTCTTGCTCAGACTGTAAAAGATCC...GCAAAGTTGTACTTGGAAGACTTCAACCTTTAAAGAAGACTGGTGGAATTGACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047672.9 |
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| CDS-3UTR GCA 90 bp | GGTCAATTCCACCAGTCTTCTTTAAAGGTTGAAGTCTTCCAAGTACAACTTTGCTGCATGTTCTATCTCTaGAACCTTTGCTGTGGAATC | + |
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Preference number: 4 (lower is better) Translates to: GQFHQSSLKVEVFQVQLCCMFYL*NLCCGI Trigger: GATTCCACAGCAAAGGTTGCAGAGATAGAACATGCA...GCAAAGTTGTACTTGGAAGACTTCAACCTTTAAAGAAGACTGGTGGAATTGACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047672.9 |
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| CDS-3UTR GCA 90 bp | GGTCAATTCCACCAGTCTTCTTTAAAGGTTGAAGTCTTCCAAGTACAACTTTGCGACACGTTTCCTTGGTaGTGCTTTGATAATGTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GQFHQSSLKVEVFQVQLCDTFPW*CFDNVV Trigger: GACAACATTATCAAAGCAGCACCAAGGAAACGTGTC...GCAAAGTTGTACTTGGAAGACTTCAACCTTTAAAGAAGACTGGTGGAATTGACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047672.9 |
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| CDS-3UTR GCA 90 bp | GGTCAATTCCACCAGTCTTCTTTAAAGGTTGAAGTCTTCCAAGTACAACTTTGCTATCTCTGCAACCTTTaGTGTGGAATCAACTCTTAC | + |
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Preference number: 4 (lower is better) Translates to: GQFHQSSLKVEVFQVQLCYLCNL*CGINSY Trigger: GTAAGAGTTGATTCCACAGCAAAGGTTGCAGAGATA...GCAAAGTTGTACTTGGAAGACTTCAACCTTTAAAGAAGACTGGTGGAATTGACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047672.9 |
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| CDS-3UTR CCA 90 bp | GGTCAATTCCACCAGTCTTCTTTAAAGGTTGAAGTCTTCCAAGTACAACTTTGCAAAACAACCCACACTTaGTGCTGCTTTGATAATGTT | + |
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Preference number: 4 (lower is better) Translates to: GQFHQSSLKVEVFQVQLCKTTHT*CCFDNV Trigger: AACATTATCAAAGCAGCACCAAGTGTGGGTTGTTTT...GCAAAGTTGTACTTGGAAGACTTCAACCTTTAAAGAAGACTGGTGGAATTGACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219690.2 |
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| CDS GCA 90 bp | CCACCTGTGACAAGAGCGAGGCGCTCCACACCTGCGAAATCCGCATaGTCAATAGCCATGACGCCAGCAGCGCCGAAGAGTTGTTCAGGG | + |
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Preference number: 5 (lower is better) Translates to: PPVTRARRSTPAKSA*SIAMTPAAPKSCSG Trigger: CCCTGAACAACTCTTCGGCGCTGCTGGCGTCATGGCTATTGAGCATGCGGATTTCGCAGGTGTGGAGCGCCTCGCTCTTGTCACAGGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047672.9 |
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| CDS GCA 90 bp | AGAGGCAATCTCACCACCTGTGACAAGAGCGAGGCGCTCCACACCTaGGAAATCCGCATGCTCAATAGCCATGACGCCAGCAGCGCCGAA | + |
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Preference number: 5 (lower is better) Translates to: RGNLTTCDKSEALHT*EIRMLNSHDASSAE Trigger: TTCGGCGCTGCTGGCGTCATGGCTATTGAGCATGCGGATTTCGCAGGTGTGGAGCGCCTCGCTCTTGTCACAGGTGGTGAGATTGCCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047672.9 |
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| CDS GCA 90 bp | TATATGGCCTTCACTGTGAGCAGCTCGGAGCTGTGCCACCAGATCTaGACTGTCATAGCCCGCATTGTCGGCTATGATGGTCGGCAACAT | + |
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Preference number: 5 (lower is better) Translates to: YMAFTVSSSELCHQI*TVIARIVGYDGRQH Trigger: ATGTTGCCGACCATCATAGCCGACAATGCGGGCTATGACAGTGCAGATCTGGTGGCACAGCTCCGAGCTGCTCACAGTGAAGGCCATATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047672.9 ENSMUST00000219690.2 |
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| CDS GCA 90 bp | CAGTCCAGCAGTTATATGGCCTTCACTGTGAGCAGCTCGGAGCTGTaGCACCAGATCTGCACTGTCATAGCCCGCATTGTCGGCTATGAT | + |
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Preference number: 5 (lower is better) Translates to: QSSSYMAFTVSSSEL*HQICTVIARIVGYD Trigger: ATCATAGCCGACAATGCGGGCTATGACAGTGCAGATCTGGTGGCACAGCTCCGAGCTGCTCACAGTGAAGGCCATATAACTGCTGGACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047672.9 ENSMUST00000219690.2 |
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| CDS TCA 90 bp | GCTGTGCCACCAGATCTGCACTGTCATAGCCCGCATTGTCGGCTATaGTGGTCGGCAACATTCTCAGGGCTTTTGCAAACGACTCCATTG | + |
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Preference number: 5 (lower is better) Translates to: AVPPDLHCHSPHCRL*WSATFSGLLQTTPL Trigger: CAATGGAGTCGTTTGCAAAAGCCCTGAGAATGTTGCCGACCATCATAGCCGACAATGCGGGCTATGACAGTGCAGATCTGGTGGCACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047672.9 |
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| CDS CCA 90 bp | GAGCATCATGCAGAGATCGTTCAGCTTCATCCAGAATTTGCTGAGTaGCACCACGAAGCACAATGGTGCATGCCTCACCAAGGGCAACCC | + |
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Preference number: 5 (lower is better) Translates to: EHHAEIVQLHPEFAE*HHEAQWCMPHQGQP Trigger: GGGTTGCCCTTGGTGAGGCATGCACCATTGTGCTTCGTGGTGCCACTCAGCAAATTCTGGATGAAGCTGAACGATCTCTGCATGATGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047672.9 |
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| CDS CCA 90 bp | AGAAAGGATTCCACTGTTGCTCAAACCACAGTCCCCATACTAAGGTaGAAGCGTCAGGCACTCTTACCCGGAGCAGCTCTGCGGCTAAGA | + |
|
Preference number: 5 (lower is better) Translates to: RKDSTVAQTTVPILR*KRQALLPGAALRLR Trigger: TCTTAGCCGCAGAGCTGCTCCGGGTAAGAGTGCCTGACGCTTCCACCTTAGTATGGGGACTGTGGTTTGAGCAACAGTGGAATCCTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219573.2 |
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| CDS TCA 90 bp | GCAATGTTCATTAAGTCCTGCCAGAATCTGGCTTCATCAGAACCATaGTCCACAGCGGAGCTCAGCAGGGCCTCTCTTGCTGCCTTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: AMFIKSCQNLASSEP*STAELSRASLAAFV Trigger: CACAAAGGCAGCAAGAGAGGCCCTGCTGAGCTCCGCTGTGGATCATGGTTCTGATGAAGCCAGATTCTGGCAGGACTTAATGAACATTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047672.9 ENSMUST00000219036.2 |
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| CDS CCA 90 bp | TTGCAAACGACTCCATTGCTACAGCTTCTTTTCCTGGGGTTCTGTTaGCAAGCTGTGTCACAGCATGGGCCATCAGCATCTCAGAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: LQTTPLLQLLFLGFC*QAVSQHGPSASQSS Trigger: GCTGCTCTGAGATGCTGATGGCCCATGCTGTGACACAGCTTGCCAACAGAACCCCAGGAAAAGAAGCTGTAGCAATGGAGTCGTTTGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047672.9 |
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| CDS GCA 90 bp | CCTTGGTGCTGCTTTGATAATGTTGTCCACTCGCAGGATCACCTCTaGTGCTTCAGCCGCACTCAGAAGAACCTGTCGCTTCACTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: PWCCFDNVVHSQDHL*CFSRTQKNLSLHLK Trigger: TTTCAAGTGAAGCGACAGGTTCTTCTGAGTGCGGCTGAAGCAGCAGAGGTGATCCTGCGAGTGGACAACATTATCAAAGCAGCACCAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047672.9 |
||
| CDS CCA 90 bp | TCTCAGGGCTTTTGCAAACGACTCCATTGCTACAGCTTCTTTTCCTaGGGTTCTGTTGGCAAGCTGTGTCACAGCATGGGCCATCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SQGFCKRLHCYSFFS*GSVGKLCHSMGHQH Trigger: ATGCTGATGGCCCATGCTGTGACACAGCTTGCCAACAGAACCCCAGGAAAAGAAGCTGTAGCAATGGAGTCGTTTGCAAAAGCCCTGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047672.9 |
||
| CDS TCA 90 bp | ACCTCTGCTGCTTCAGCCGCACTCAGAAGAACCTGTCGCTTCACTTaGAAACTCTCTGTTATACCCAGTACTGCCATATCGCCGATGGTA | + |
|
Preference number: 5 (lower is better) Translates to: TSAASAALRRTCRFT*KLSVIPSTAISPMV Trigger: TACCATCGGCGATATGGCAGTACTGGGTATAACAGAGAGTTTTCAAGTGAAGCGACAGGTTCTTCTGAGTGCGGCTGAAGCAGCAGAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047672.9 ENSMUST00000219690.2 |
||
| CDS GCA 90 bp | TGGTGCTGCTTTGATAATGTTGTCCACTCGCAGGATCACCTCTGCTaGTTCAGCCGCACTCAGAAGAACCTGTCGCTTCACTTGAAAACT | + |
|
Preference number: 5 (lower is better) Translates to: WCCFDNVVHSQDHLC*FSRTQKNLSLHLKT Trigger: AGTTTTCAAGTGAAGCGACAGGTTCTTCTGAGTGCGGCTGAAGCAGCAGAGGTGATCCTGCGAGTGGACAACATTATCAAAGCAGCACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047672.9 ENSMUST00000219690.2 |
||
| CDS GCA 90 bp | ACTTGGTGCTGCTTTGATAATGTTGTCCACTCGCAGGATCACCTCTaGTGCTTCAGCCGCACTCAGAAGAACCTGTCGCTTCACTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: TWCCFDNVVHSQDHL*CFSRTQKNLSLHLK Trigger: TTTCAAGTGAAGCGACAGGTTCTTCTGAGTGCGGCTGAAGCAGCAGAGGTGATCCTGCGAGTGGACAACATTATCAAAGCAGCACCAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219690.2 |
||
| CDS-3UTR CAA 90 bp | CAGCTAATGTTCAAACTTAAGGCTATCATGGACAGGTCAATTCCACCAGTCTTCTCAGCAGGGCCTCTCTaGCTGCCTTTGTGGCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: QLMFKLKAIMDRSIPPVFSAGPL*LPLWLL Trigger: GAGAAGCCACAAAGGCAGCAAGAGAGGCCCTGCTGA...GAAGACTGGTGGAATTGACCTGTCCATGATAGCCTTAAGTTTGAACATTAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047672.9 |
||
| CDS TCA 90 bp | CTGAGAACCGCTTCCACGGCCAGTTTAGTAAAGTGGTCCTTGTGGTaGGTAAGGAGCTTTGAGGACAATGTCGTTCCTGCAATGTTCATT | + |
|
Preference number: 5 (lower is better) Translates to: LRTASTASLVKWSLW*VRSFEDNVVPAMFI Trigger: AATGAACATTGCAGGAACGACATTGTCCTCAAAGCTCCTTACTCACCACAAGGACCACTTTACTAAACTGGCCGTGGAAGCGGTTCTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047672.9 ENSMUST00000219036.2 |
||
| CDS GCA 90 bp | AAGAACCTGTCGCTTCACTTGAAAACTCTCTGTTATACCCAGTACTaGCATATCGCCGATGGTACCTTCCTTCATATCCAGTCCAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: KNLSLHLKTLCYTQY*HIADGTFLHIQSSS Trigger: ACTGCTGGACTGGATATGAAGGAAGGTACCATCGGCGATATGGCAGTACTGGGTATAACAGAGAGTTTTCAAGTGAAGCGACAGGTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047672.9 ENSMUST00000219690.2 |
||
| CDS CCA 90 bp | TCACTTGAAAACTCTCTGTTATACCCAGTACTGCCATATCGCCGATaGTACCTTCCTTCATATCCAGTCCAGCAGTTATATGGCCTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: SLENSLLYPVLPYRR*YLPSYPVQQLYGLH Trigger: GTGAAGGCCATATAACTGCTGGACTGGATATGAAGGAAGGTACCATCGGCGATATGGCAGTACTGGGTATAACAGAGAGTTTTCAAGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047672.9 ENSMUST00000219690.2 |
||
| CDS-3UTR CAA 90 bp | GGTCAATTCCACCAGTCTTCTTTAAAGGTTGAAGTCTTCCAAGTACAACTTTGCAGCTTCATCCAGAATTaGCTGAGTGGCACCACGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GQFHQSSLKVEVFQVQLCSFIQN*LSGTTK Trigger: CTTCGTGGTGCCACTCAGCAAATTCTGGATGAAGCT...GCAAAGTTGTACTTGGAAGACTTCAACCTTTAAAGAAGACTGGTGGAATTGACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047672.9 |
||
| CDS-3UTR CAA 90 bp | CAGCTAATGTTCAAACTTAAGGCTATCATGGACAGGTCAATTCCACCAGTCTTCTTCCTTGGTGCTGCTTaGATAATGTTGTCCACTCGC | + |
|
Preference number: 5 (lower is better) Translates to: QLMFKLKAIMDRSIPPVFFLGAA*IMLSTR Trigger: GCGAGTGGACAACATTATCAAAGCAGCACCAAGGAA...GAAGACTGGTGGAATTGACCTGTCCATGATAGCCTTAAGTTTGAACATTAGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047672.9 |
||
| CDS-3UTR CAA 90 bp | GGTCAATTCCACCAGTCTTCTTTAAAGGTTGAAGTCTTCCAAGTACAACTTTGCTCATCAGCTCCAGCCTaGAAGATATTAACAGGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: GQFHQSSLKVEVFQVQLCSSAPA*KILTGA Trigger: CGCACCTGTTAATATCTTCAAGGCTGGAGCTGATGA...GCAAAGTTGTACTTGGAAGACTTCAACCTTTAAAGAAGACTGGTGGAATTGACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047672.9 |
||
| CDS-3UTR CAA 90 bp | CAGCTAATGTTCAAACTTAAGGCTATCATGGACAGGTCAATTCCACCAGTCTTCTTGCAAACGACTCCATaGCTACAGCTTCTTTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: QLMFKLKAIMDRSIPPVFLQTTP*LQLLFL Trigger: CAGGAAAAGAAGCTGTAGCAATGGAGTCGTTTGCAA...GAAGACTGGTGGAATTGACCTGTCCATGATAGCCTTAAGTTTGAACATTAGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047672.9 |
||
| CDS-3UTR CAA 90 bp | GGTCAATTCCACCAGTCTTCTTTAAAGGTTGAAGTCTTCCAAGTACAACTTTGCACACTTGGTGCTGCTTaGATAATGTTGTCCACTCGC | + |
|
Preference number: 5 (lower is better) Translates to: GQFHQSSLKVEVFQVQLCTLGAA*IMLSTR Trigger: GCGAGTGGACAACATTATCAAAGCAGCACCAAGTGT...GCAAAGTTGTACTTGGAAGACTTCAACCTTTAAAGAAGACTGGTGGAATTGACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219690.2 |
||
| CDS-3UTR CAA 90 bp | CAGCTAATGTTCAAACTTAAGGCTATCATGGACAGGTCAATTCCACCAGTCTTCAGCAGCGCCGAAGAGTaGTTCAGGGTAATTATAAAT | + |
|
Preference number: 5 (lower is better) Translates to: QLMFKLKAIMDRSIPPVFSSAEE*FRVIIN Trigger: ATTTATAATTACCCTGAACAACTCTTCGGCGCTGCT...GAAGACTGGTGGAATTGACCTGTCCATGATAGCCTTAAGTTTGAACATTAGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047672.9 |
||
| CDS-3UTR CAA 90 bp | GGTCAATTCCACCAGTCTTCTTTAAAGGTTGAAGTCTTCCAAGTACAACTTTGCACATTCTCAGGGCTTTaGCAAACGACTCCATTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: GQFHQSSLKVEVFQVQLCTFSGL*QTTPLL Trigger: TAGCAATGGAGTCGTTTGCAAAAGCCCTGAGAATGT...GCAAAGTTGTACTTGGAAGACTTCAACCTTTAAAGAAGACTGGTGGAATTGACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047672.9 |
||
| CDS-3UTR CAA 90 bp | CAGCTAATGTTCAAACTTAAGGCTATCATGGACAGGTCAATTCCACCAGTCTTCAACCTGTCGCTTCACTaGAAAACTCTCTGTTATACC | + |
|
Preference number: 5 (lower is better) Translates to: QLMFKLKAIMDRSIPPVFNLSLH*KTLCYT Trigger: GGTATAACAGAGAGTTTTCAAGTGAAGCGACAGGTT...GAAGACTGGTGGAATTGACCTGTCCATGATAGCCTTAAGTTTGAACATTAGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047672.9 ENSMUST00000219690.2 |
||
| CDS GCA 90 bp | TTCAACTTTCTCCTTCATCTTCTCCTTTTCTGCATGTTCTATCTCTaGAACCTTTGCTGTGGAATCAACTCTTACCCGAGAGCCAAATAT | + |
|
Preference number: 5 (lower is better) Translates to: FNFLLHLLLFCMFYL*NLCCGINSYPRAKY Trigger: ATATTTGGCTCTCGGGTAAGAGTTGATTCCACAGCAAAGGTTGCAGAGATAGAACATGCAGAAAAGGAGAAGATGAAGGAGAAAGTTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047672.9 |
||
| CDS-3UTR CAA 90 bp | GGTCAATTCCACCAGTCTTCTTTAAAGGTTGAAGTCTTCCAAGTACAACTTTGCAACCTGTCGCTTCACTaGAAAACTCTCTGTTATACC | + |
|
Preference number: 5 (lower is better) Translates to: GQFHQSSLKVEVFQVQLCNLSLH*KTLCYT Trigger: GGTATAACAGAGAGTTTTCAAGTGAAGCGACAGGTT...GCAAAGTTGTACTTGGAAGACTTCAACCTTTAAAGAAGACTGGTGGAATTGACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047672.9 ENSMUST00000219690.2 |
||
| CDS GCA 90 bp | CTCCTTCATCTTCTCCTTTTCTGCATGTTCTATCTCTGCAACCTTTaGTGTGGAATCAACTCTTACCCGAGAGCCAAATATCTTTATTTT | + |
|
Preference number: 5 (lower is better) Translates to: LLHLLLFCMFYLCNL*CGINSYPRAKYLYF Trigger: AAAATAAAGATATTTGGCTCTCGGGTAAGAGTTGATTCCACAGCAAAGGTTGCAGAGATAGAACATGCAGAAAAGGAGAAGATGAAGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047672.9 |
||
| CDS CCA 90 bp | TCATCTTCTCCTTTTCTGCATGTTCTATCTCTGCAACCTTTGCTGTaGAATCAACTCTTACCCGAGAGCCAAATATCTTTATTTTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSSPFLHVLSLQPLL*NQLLPESQISLFCL Trigger: CAGACAAAATAAAGATATTTGGCTCTCGGGTAAGAGTTGATTCCACAGCAAAGGTTGCAGAGATAGAACATGCAGAAAAGGAGAAGATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047672.9 |
||
| CDS-3UTR CAA 90 bp | GGTCAATTCCACCAGTCTTCTTTAAAGGTTGAAGTCTTCCAAGTACAACTTTGCCATCATCTTGAACCCTaGACATATCAACTAGAACCT | + |
|
Preference number: 5 (lower is better) Translates to: GQFHQSSLKVEVFQVQLCHHLEP*TYQLEP Trigger: AGGTTCTAGTTGATATGTCAAGGGTTCAAGATGATG...GCAAAGTTGTACTTGGAAGACTTCAACCTTTAAAGAAGACTGGTGGAATTGACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047672.9 |
||
| CDS-3UTR CAA 90 bp | GGTCAATTCCACCAGTCTTCTTTAAAGGTTGAAGTCTTCCAAGTACAACTTTGCACTTCTTCAATAAGTTaGCAACTTCCAAGCTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: GQFHQSSLKVEVFQVQLCTSSIS*QLPSFT Trigger: TGTGAAGCTTGGAAGTTGCAAACTTATTGAAGAAGT...GCAAAGTTGTACTTGGAAGACTTCAACCTTTAAAGAAGACTGGTGGAATTGACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047672.9 |
||
| CDS GCA 72 bp | ACAAGAGCGAGGCGCTCCACACCTGCGAAATCCGCATaGTCAATAGCCATGACGCCAGCAGCGCCGAAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: TRARRSTPAKSA*SIAMTPAAPKS Trigger: ACTCTTCGGCGCTGCTGGCGTCATGGCTATTGAGCATGCGGATTTCGCAGGTGTGGAGCGCCTCGCTCTTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047672.9 |
||
| CDS GCA 72 bp | CTCACCACCTGTGACAAGAGCGAGGCGCTCCACACCTaGGAAATCCGCATGCTCAATAGCCATGACGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LTTCDKSEALHT*EIRMLNSHDAS Trigger: GCTGGCGTCATGGCTATTGAGCATGCGGATTTCGCAGGTGTGGAGCGCCTCGCTCTTGTCACAGGTGGTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047672.9 |
||
| CDS GCA 72 bp | CGTCGTTGGTCACCATCAGAGCGGCGTCTCGTCCACTaGTTAGGAGAATTTTGTCCATGCCCTTCGGTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: RRWSPSERRLVH*LGEFCPCPSVP Trigger: TGGGACCGAAGGGCATGGACAAAATTCTCCTAAGCAGTGGACGAGACGCCGCTCTGATGGTGACCAACGACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047672.9 ENSMUST00000219036.2 ENSMUST00000219573.2 |
||
| CDS GCA 72 bp | TTCACTGTGAGCAGCTCGGAGCTGTGCCACCAGATCTaGACTGTCATAGCCCGCATTGTCGGCTATGATGGT | + |
|
Preference number: 6 (lower is better) Translates to: FTVSSSELCHQI*TVIARIVGYDG Trigger: ACCATCATAGCCGACAATGCGGGCTATGACAGTGCAGATCTGGTGGCACAGCTCCGAGCTGCTCACAGTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047672.9 ENSMUST00000219690.2 |
||
| CDS CCA 72 bp | TCCACTGTTGCTCAAACCACAGTCCCCATACTAAGGTaGAAGCGTCAGGCACTCTTACCCGGAGCAGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: STVAQTTVPILR*KRQALLPGAAL Trigger: CAGAGCTGCTCCGGGTAAGAGTGCCTGACGCTTCCACCTTAGTATGGGGACTGTGGTTTGAGCAACAGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219573.2 |
||
| CDS CAA 72 bp | CGAGCTGTCTCGGCCCTCTCTTCATCAGCTCCAGCCTaGAAGATATTAACAGGTGCGAGGGAAAGGGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: RAVSALSSSAPA*KILTGAREREA Trigger: GGCTTCCCTTTCCCTCGCACCTGTTAATATCTTCAAGGCTGGAGCTGATGAAGAGAGGGCCGAGACAGCTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047672.9 ENSMUST00000219036.2 ENSMUST00000219573.2 |
||
| CDS CAA 90 bp | GCGGGGTTGTCCACACCAATGTTCTTGAGAATGGTAGCACCGTCGTaGGTCACCATCAGAGCGGCGTCTCGTCCACTGCTTAGGAGAATT | + |
|
Preference number: 6 (lower is better) Translates to: AGLSTPMFLRMVAPS*VTIRAASRPLLRRI Trigger: AATTCTCCTAAGCAGTGGACGAGACGCCGCTCTGATGGTGACCAACGACGGTGCTACCATTCTCAAGAACATTGGTGTGGACAACCCCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000047672.9 ENSMUST00000218059.2 ENSMUST00000218719.2 ENSMUST00000219036.2 ENSMUST00000219573.2 |
||
| CDS GCA 72 bp | CGGCGTCTCGTCCACTGCTTAGGAGAATTTTGTCCATaGCCTTCGGTCCCAAAGTGCTCTTCACCAAGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: RRLVHCLGEFCP*PSVPKCSSPSL Trigger: GAGACTTGGTGAAGAGCACTTTGGGACCGAAGGGCATGGACAAAATTCTCCTAAGCAGTGGACGAGACGCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047672.9 ENSMUST00000219036.2 ENSMUST00000219573.2 |
||
| CDS GCA 72 bp | AGTTATATGGCCTTCACTGTGAGCAGCTCGGAGCTGTaGCACCAGATCTGCACTGTCATAGCCCGCATTGTC | + |
|
Preference number: 6 (lower is better) Translates to: SYMAFTVSSSEL*HQICTVIARIV Trigger: GACAATGCGGGCTATGACAGTGCAGATCTGGTGGCACAGCTCCGAGCTGCTCACAGTGAAGGCCATATAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047672.9 ENSMUST00000219690.2 |
||
| CDS CAA 72 bp | ATCAGAGCGGCGTCTCGTCCACTGCTTAGGAGAATTTaGTCCATGCCCTTCGGTCCCAAAGTGCTCTTCACC | + |
|
Preference number: 6 (lower is better) Translates to: IRAASRPLLRRI*SMPFGPKVLFT Trigger: GGTGAAGAGCACTTTGGGACCGAAGGGCATGGACAAAATTCTCCTAAGCAGTGGACGAGACGCCGCTCTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047672.9 ENSMUST00000219036.2 ENSMUST00000219573.2 |
||
| CDS CAA 72 bp | TCCACACCAATGTTCTTGAGAATGGTAGCACCGTCGTaGGTCACCATCAGAGCGGCGTCTCGTCCACTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: STPMFLRMVAPS*VTIRAASRPLL Trigger: AAGCAGTGGACGAGACGCCGCTCTGATGGTGACCAACGACGGTGCTACCATTCTCAAGAACATTGGTGTGGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000047672.9 ENSMUST00000218059.2 ENSMUST00000218719.2 ENSMUST00000219036.2 ENSMUST00000219573.2 |
||
| CDS CAA 72 bp | TCGGGGACACGTTTCCTTGGTGCTGCTTTGATAATGTaGTCCACTCGCAGGATCACCTCTGCTGCTTCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SGTRFLGAALIM*STRRITSAASA Trigger: GGCTGAAGCAGCAGAGGTGATCCTGCGAGTGGACAACATTATCAAAGCAGCACCAAGGAAACGTGTCCCCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047672.9 |
||
| CDS TCA 72 bp | ATTAAGTCCTGCCAGAATCTGGCTTCATCAGAACCATaGTCCACAGCGGAGCTCAGCAGGGCCTCTCTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: IKSCQNLASSEP*STAELSRASLA Trigger: AGCAAGAGAGGCCCTGCTGAGCTCCGCTGTGGATCATGGTTCTGATGAAGCCAGATTCTGGCAGGACTTAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047672.9 ENSMUST00000219036.2 |
||
| CDS TCA 72 bp | GAGTCTGCCAGACTCCCACCTAGTTTCTTGATGACATaGATCGCCTCCAGGTTGCCAGAGCCTTTCAGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: ESARLPPSFLMT*IASRLPEPFSL Trigger: CAGACTGAAAGGCTCTGGCAACCTGGAGGCGATTCATGTCATCAAGAAACTAGGTGGGAGTCTGGCAGACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047672.9 ENSMUST00000219036.2 |
||
| CDS TCA 72 bp | CCAGATCTGCACTGTCATAGCCCGCATTGTCGGCTATaGTGGTCGGCAACATTCTCAGGGCTTTTGCAAACG | + |
|
Preference number: 6 (lower is better) Translates to: PDLHCHSPHCRL*WSATFSGLLQT Trigger: CGTTTGCAAAAGCCCTGAGAATGTTGCCGACCATCATAGCCGACAATGCGGGCTATGACAGTGCAGATCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047672.9 ENSMUST00000219690.2 |
||
| CDS CAA 90 bp | ATATCAACTAGAACCTTTGCTGCGGGGTTGTCCACACCAATGTTCTaGAGAATGGTAGCACCGTCGTTGGTCACCATCAGAGCGGCGTCT | + |
|
Preference number: 6 (lower is better) Translates to: ISTRTFAAGLSTPMF*RMVAPSLVTIRAAS Trigger: AGACGCCGCTCTGATGGTGACCAACGACGGTGCTACCATTCTCAAGAACATTGGTGTGGACAACCCCGCAGCAAAGGTTCTAGTTGATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000047672.9 ENSMUST00000218059.2 ENSMUST00000218719.2 ENSMUST00000219036.2 ENSMUST00000219573.2 |
||
| CDS CAA 90 bp | CACCTCTGCTGCTTCAGCCGCACTCAGAAGAACCTGTCGCTTCACTaGAAAACTCTCTGTTATACCCAGTACTGCCATATCGCCGATGGT | + |
|
Preference number: 6 (lower is better) Translates to: HLCCFSRTQKNLSLH*KTLCYTQYCHIADG Trigger: ACCATCGGCGATATGGCAGTACTGGGTATAACAGAGAGTTTTCAAGTGAAGCGACAGGTTCTTCTGAGTGCGGCTGAAGCAGCAGAGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047672.9 ENSMUST00000219690.2 |
||
| CDS GCA 72 bp | TTTGATAATGTTGTCCACTCGCAGGATCACCTCTGCTaGTTCAGCCGCACTCAGAAGAACCTGTCGCTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: FDNVVHSQDHLC*FSRTQKNLSLH Trigger: GTGAAGCGACAGGTTCTTCTGAGTGCGGCTGAAGCAGCAGAGGTGATCCTGCGAGTGGACAACATTATCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047672.9 ENSMUST00000219690.2 |
||
| CDS GCA 72 bp | TGCTTTGATAATGTTGTCCACTCGCAGGATCACCTCTaGTGCTTCAGCCGCACTCAGAAGAACCTGTCGCTT | + |
|
Preference number: 6 (lower is better) Translates to: CFDNVVHSQDHL*CFSRTQKNLSL Trigger: AAGCGACAGGTTCTTCTGAGTGCGGCTGAAGCAGCAGAGGTGATCCTGCGAGTGGACAACATTATCAAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047672.9 ENSMUST00000219690.2 |
||
| CDS CCA 72 bp | ACTCCATTGCTACAGCTTCTTTTCCTGGGGTTCTGTTaGCAAGCTGTGTCACAGCATGGGCCATCAGCATCT | + |
|
Preference number: 6 (lower is better) Translates to: TPLLQLLFLGFC*QAVSQHGPSAS Trigger: AGATGCTGATGGCCCATGCTGTGACACAGCTTGCCAACAGAACCCCAGGAAAAGAAGCTGTAGCAATGGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047672.9 |
||
| CDS CAA 72 bp | AGAACCTTTGCTGCGGGGTTGTCCACACCAATGTTCTaGAGAATGGTAGCACCGTCGTTGGTCACCATCAGA | + |
|
Preference number: 6 (lower is better) Translates to: RTFAAGLSTPMF*RMVAPSLVTIR Trigger: TCTGATGGTGACCAACGACGGTGCTACCATTCTCAAGAACATTGGTGTGGACAACCCCGCAGCAAAGGTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000047672.9 ENSMUST00000218059.2 ENSMUST00000218719.2 ENSMUST00000219036.2 ENSMUST00000219573.2 |
||
| CDS TCA 72 bp | TCATGCAGAGATCGTTCAGCTTCATCCAGAATTTGCTaGGTGGCACCACGAAGCACAATGGTGCATGCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SCRDRSASSRIC*VAPRSTMVHAS Trigger: TGAGGCATGCACCATTGTGCTTCGTGGTGCCACTCAGCAAATTCTGGATGAAGCTGAACGATCTCTGCATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047672.9 |
||
| CDS CCA 72 bp | TTTTGCAAACGACTCCATTGCTACAGCTTCTTTTCCTaGGGTTCTGTTGGCAAGCTGTGTCACAGCATGGGC | + |
|
Preference number: 6 (lower is better) Translates to: FCKRLHCYSFFS*GSVGKLCHSMG Trigger: GCCCATGCTGTGACACAGCTTGCCAACAGAACCCCAGGAAAAGAAGCTGTAGCAATGGAGTCGTTTGCAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047672.9 |
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| CDS TCA 72 bp | GCTTCAGCCGCACTCAGAAGAACCTGTCGCTTCACTTaGAAACTCTCTGTTATACCCAGTACTGCCATATCG | + |
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Preference number: 6 (lower is better) Translates to: ASAALRRTCRFT*KLSVIPSTAIS Trigger: CGATATGGCAGTACTGGGTATAACAGAGAGTTTTCAAGTGAAGCGACAGGTTCTTCTGAGTGCGGCTGAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047672.9 ENSMUST00000219690.2 |
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| CDS CAA 72 bp | ACCCTTGACATATCAACTAGAACCTTTGCTGCGGGGTaGTCCACACCAATGTTCTTGAGAATGGTAGCACCG | + |
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Preference number: 6 (lower is better) Translates to: TLDISTRTFAAG*STPMFLRMVAP Trigger: CGGTGCTACCATTCTCAAGAACATTGGTGTGGACAACCCCGCAGCAAAGGTTCTAGTTGATATGTCAAGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000047672.9 ENSMUST00000218059.2 ENSMUST00000218719.2 ENSMUST00000219036.2 ENSMUST00000219573.2 |
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| CDS CAA 72 bp | TGCTTCAGCCGCACTCAGAAGAACCTGTCGCTTCACTaGAAAACTCTCTGTTATACCCAGTACTGCCATATC | + |
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Preference number: 6 (lower is better) Translates to: CFSRTQKNLSLH*KTLCYTQYCHI Trigger: GATATGGCAGTACTGGGTATAACAGAGAGTTTTCAAGTGAAGCGACAGGTTCTTCTGAGTGCGGCTGAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047672.9 ENSMUST00000219690.2 |
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| CDS GCA 72 bp | TCGCTTCACTTGAAAACTCTCTGTTATACCCAGTACTaGCATATCGCCGATGGTACCTTCCTTCATATCCAG | + |
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Preference number: 6 (lower is better) Translates to: SLHLKTLCYTQY*HIADGTFLHIQ Trigger: CTGGATATGAAGGAAGGTACCATCGGCGATATGGCAGTACTGGGTATAACAGAGAGTTTTCAAGTGAAGCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047672.9 ENSMUST00000219690.2 |
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| CDS TCA 72 bp | ATAAGTTTGCAACTTCCAAGCTTCACAAGTTCTGGGTaGTCAAAGGTAGAGGCAATCTCACCACCTGTGACA | + |
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Preference number: 6 (lower is better) Translates to: ISLQLPSFTSSG*SKVEAISPPVT Trigger: TGTCACAGGTGGTGAGATTGCCTCTACCTTTGATCACCCAGAACTTGTGAAGCTTGGAAGTTGCAAACTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047672.9 |
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| CDS CCA 72 bp | AACTCTCTGTTATACCCAGTACTGCCATATCGCCGATaGTACCTTCCTTCATATCCAGTCCAGCAGTTATAT | + |
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Preference number: 6 (lower is better) Translates to: NSLLYPVLPYRR*YLPSYPVQQLY Trigger: ATATAACTGCTGGACTGGATATGAAGGAAGGTACCATCGGCGATATGGCAGTACTGGGTATAACAGAGAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047672.9 ENSMUST00000219690.2 |
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| CDS CAA 90 bp | TCTCCTTCATCTTCTCCTTTTCTGCATGTTCTATCTCTGCAACCTTaGCTGTGGAATCAACTCTTACCCGAGAGCCAAATATCTTTATTT | + |
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Preference number: 6 (lower is better) Translates to: SPSSSPFLHVLSLQP*LWNQLLPESQISLF Trigger: AAATAAAGATATTTGGCTCTCGGGTAAGAGTTGATTCCACAGCAAAGGTTGCAGAGATAGAACATGCAGAAAAGGAGAAGATGAAGGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047672.9 |
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