Pregenerated sensors for CCSER1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039578Ensembl transcript IDs: ENSMUST00000045522.13, ENSMUST00000067307.11, ENSMUST00000126214.8, ENSMUST00000134710.3, ENSMUST00000232648.2
Found 294 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTTGTTCCATTAGAACATACCCAGTGTCACCTCCTGGTGTTAATGTaGCAGGGAGAGGTTACAAATAGTCCAGTTCATCCTTGGGAACTA | + |
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Preference number: 1 (lower is better) Translates to: LVPLEHTQCHLLVLM*QGEVTNSPVHPWEL Trigger: TAGTTCCCAAGGATGAACTGGACTATTTGTAACCTCTCCCTGTCACATTAACACCAGGAGGTGACACTGGGTATGTTCTAATGGAACAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134710.3 |
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| 3UTR CCA 90 bp | TCCTGCTGGCCCAGAGTCTGGAACTCTGTTGTATGTAAATTGTGGTaGAGAAAAACATTCTTCCTGCTGTATGTGTGTAAGGAGATAGGT | + |
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Preference number: 1 (lower is better) Translates to: SCWPRVWNSVVCKLW*RKTFFLLYVCKEIG Trigger: ACCTATCTCCTTACACACATACAGCAGGAAGAATGTTTTTCTCCACCACAATTTACATACAACAGAGTTCCAGACTCTGGGCCAGCAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232648.2 |
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| 3UTR CCA 90 bp | CCATCCTGCTGGCCCAGAGTCTGGAACTCTGTTGTATGTAAATTGTaGTGGAGAAAAACATTCTTCCTGCTGTATGTGTGTAAGGAGATA | + |
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Preference number: 1 (lower is better) Translates to: PSCWPRVWNSVVCKL*WRKTFFLLYVCKEI Trigger: TATCTCCTTACACACATACAGCAGGAAGAATGTTTTTCTCCACCACAATTTACATACAACAGAGTTCCAGACTCTGGGCCAGCAGGATGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232648.2 |
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| 3UTR TCA 90 bp | AAACTGCCATGTCATTTCCCATTTGTTCGTCTCATCCGTGCATGCTaGTGGATTCTGTCTGATAGAGAATGCATGAAAAATAGCACGTGC | + |
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Preference number: 1 (lower is better) Translates to: KLPCHFPFVRLIRAC*WILSDRECMKNSTC Trigger: GCACGTGCTATTTTTCATGCATTCTCTATCAGACAGAATCCATCAGCATGCACGGATGAGACGAACAAATGGGAAATGACATGGCAGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000126214.8 ENSMUST00000232648.2 |
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| 3UTR CCA 90 bp | TTCATAGGGTATAGATTTTTCTACCCATCCTGCTGGCCCAGAGTCTaGAACTCTGTTGTATGTAAATTGTGGTGGAGAAAAACATTCTTC | + |
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Preference number: 1 (lower is better) Translates to: FIGYRFFYPSCWPRV*NSVVCKLWWRKTFF Trigger: GAAGAATGTTTTTCTCCACCACAATTTACATACAACAGAGTTCCAGACTCTGGGCCAGCAGGATGGGTAGAAAAATCTATACCCTATGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000232648.2 |
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| 3UTR CCA 90 bp | TCATTTCTATTGTTCATAGGGTATAGATTTTTCTACCCATCCTGCTaGCCCAGAGTCTGGAACTCTGTTGTATGTAAATTGTGGTGGAGA | + |
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Preference number: 1 (lower is better) Translates to: SFLLFIGYRFFYPSC*PRVWNSVVCKLWWR Trigger: TCTCCACCACAATTTACATACAACAGAGTTCCAGACTCTGGGCCAGCAGGATGGGTAGAAAAATCTATACCCTATGAACAATAGAAATGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232648.2 |
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| 3UTR CCA 90 bp | GCAATGCATGTTCAGTGTAGTTCTATTAATAGCAGCTTAGGCAAATaGCATGCTAAAACTGCCATGTCATTTCCCATTTGTTCGTCTCAT | + |
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Preference number: 1 (lower is better) Translates to: AMHVQCSSINSSLGK*HAKTAMSFPICSSH Trigger: ATGAGACGAACAAATGGGAAATGACATGGCAGTTTTAGCATGCCATTTGCCTAAGCTGCTATTAATAGAACTACACTGAACATGCATTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126214.8 ENSMUST00000232648.2 |
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| 3UTR-3UTR TCA 90 bp | TCTCCAGAGCCCAGTGGCCCACCTACTGAACAACTTCCTGCCCATAACACTGAAAAACTGTGCCTTTCATaGGTGTCTTCTGGGCACTGT | + |
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Preference number: 2 (lower is better) Translates to: SPEPSGPPTEQLPAHNTEKLCLS*VSSGHC Trigger: ACAGTGCCCAGAAGACACTCATGAAAGGCACAGTTT...TTCAGTGTTATGGGCAGGAAGTTGTTCAGTAGGTGGGCCACTGGGCTCTGGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000134710.3 |
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| 3UTR CAA 90 bp | GCTTCGTGGTTCCCCCTTGTGTGTTTCATAACTCCTCCTAATTCCTaGTCCTTCAAGAAATTGCTAAGACACAGACCTGGGAGTTGGCAG | + |
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Preference number: 2 (lower is better) Translates to: ASWFPLVCFITPPNS*SFKKLLRHRPGSWQ Trigger: CTGCCAACTCCCAGGTCTGTGTCTTAGCAATTTCTTGAAGGACAAGGAATTAGGAGGAGTTATGAAACACACAAGGGGGAACCACGAAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232648.2 |
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| 3UTR-3UTR CCA 90 bp | ATACCCTTCCTTTCAAAAGTGAGCAGGTTATCCCAGGGTTTCTTCTTGAATGTTCATGGGCAGCCCTTCTaGCTTAGCTGCTGCCTTCAG | + |
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Preference number: 2 (lower is better) Translates to: IPFLSKVSRLSQGFFLNVHGQPF*LSCCLQ Trigger: CTGAAGGCAGCAGCTAAGCCAGAAGGGCTGCCCATG...AACATTCAAGAAGAAACCCTGGGATAACCTGCTCACTTTTGAAAGGAAGGGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232648.2 |
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| 3UTR-3UTR TCA 90 bp | CAGTCTCAAGGTGATCGTTCCAAAAATACCCTTCCTTTCAAAAGTGAGCAGGTTGTCCTTTGGTTTTTCTaGGAACATGGGCAGCCCTTC | + |
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Preference number: 2 (lower is better) Translates to: QSQGDRSKNTLPFKSEQVVLWFF*EHGQPF Trigger: GAAGGGCTGCCCATGTTCTCAGAAAAACCAAAGGAC...AACCTGCTCACTTTTGAAAGGAAGGGTATTTTTGGAACGATCACCTTGAGACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000232648.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGATCGTTCCAAAAATACCCTTCCTTTCAAAAGTGAGCAGGTTATCCCAGGGAGCAGCTTAGGCAAATaGCATGCTAAAACTGCCATG | + |
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Preference number: 2 (lower is better) Translates to: GDRSKNTLPFKSEQVIPGSSLGK*HAKTAM Trigger: CATGGCAGTTTTAGCATGCCATTTGCCTAAGCTGCT...CCCTGGGATAACCTGCTCACTTTTGAAAGGAAGGGTATTTTTGGAACGATCACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000126214.8 ENSMUST00000232648.2 |
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| 3UTR-3UTR CCA 90 bp | AGAACTTACGATAGCCATACAGAGAAACTTCTGAAAGAACCCCATGCCATTGTTGATAGGTCCTCTGGGTaGCTGTCCAAATCTGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: RTYDSHTEKLLKEPHAIVDRSSG*LSKSAC Trigger: ACAGGCAGATTTGGACAGCCACCCAGAGGACCTATC...AACAATGGCATGGGGTTCTTTCAGAAGTTTCTCTGTATGGCTATCGTAAGTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232648.2 |
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| 3UTR-3UTR GCA 90 bp | CAGTCTCAAGGTGATCGTTCCAAAAATACCCTTCCTTTCAAAAGTGAGCAGGTTTGTTCGTCTCATCCGTaGATGCTGATGGATTCTGTC | + |
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Preference number: 2 (lower is better) Translates to: QSQGDRSKNTLPFKSEQVCSSHP*MLMDSV Trigger: GACAGAATCCATCAGCATGCACGGATGAGACGAACA...AACCTGCTCACTTTTGAAAGGAAGGGTATTTTTGGAACGATCACCTTGAGACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000126214.8 ENSMUST00000232648.2 |
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| 3UTR-3UTR GCA 90 bp | AGAACTTACGATAGCCATACAGAGAAACTTCTGAAAGAACCCCATGCCATTGTTTTCTGGCTTAGCTGCTaGCTTCAGAAAGCTCTGTCC | + |
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Preference number: 2 (lower is better) Translates to: RTYDSHTEKLLKEPHAIVFWLSC*LQKALS Trigger: GGACAGAGCTTTCTGAAGGCAGCAGCTAAGCCAGAA...AACAATGGCATGGGGTTCTTTCAGAAGTTTCTCTGTATGGCTATCGTAAGTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232648.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCAGGTAGACACAGTTGTCCTTCAAGGAATGACTCTTCTACATCTGGTGTTGCTGGCATCATGTCTTTaGATATGTACCGCCTTGGAG | + |
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Preference number: 2 (lower is better) Translates to: FQVDTVVLQGMTLLHLVLLASCL*ICTALE Trigger: CTCCAAGGCGGTACATATCCAAAGACATGATGCCAG...CAACACCAGATGTAGAAGAGTCATTCCTTGAAGGACAACTGTGTCTACCTGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126214.8 ENSMUST00000232648.2 |
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| 3UTR-3UTR TCA 90 bp | AGAACTTACGATAGCCATACAGAGAAACTTCTGAAAGAACCCCATGCCATTGTTCTCATCCGTGCATGCTaGTGGATTCTGTCTGATAGA | + |
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Preference number: 2 (lower is better) Translates to: RTYDSHTEKLLKEPHAIVLIRAC*WILSDR Trigger: TCTATCAGACAGAATCCATCAGCATGCACGGATGAG...AACAATGGCATGGGGTTCTTTCAGAAGTTTCTCTGTATGGCTATCGTAAGTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126214.8 ENSMUST00000232648.2 |
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| 3UTR-3UTR TCA 90 bp | TTTCAGGTAGACACAGTTGTCCTTCAAGGAATGACTCTTCTACATCTGGTGTTGAAGAAATCAATTCACTaGAAGAATGCCCACGCGAGG | + |
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Preference number: 2 (lower is better) Translates to: FQVDTVVLQGMTLLHLVLKKSIH*KNAHAR Trigger: CCTCGCGTGGGCATTCTTTCAGTGAATTGATTTCTT...CAACACCAGATGTAGAAGAGTCATTCCTTGAAGGACAACTGTGTCTACCTGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126214.8 ENSMUST00000232648.2 |
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| 3UTR-3UTR TCA 90 bp | TTTCAGGTAGACACAGTTGTCCTTCAAGGAATGACTCTTCTACATCTGGTGTTGTTCTACATCTGGTGTTaGGAAGAGTCTGCAGCAGAA | + |
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Preference number: 2 (lower is better) Translates to: FQVDTVVLQGMTLLHLVLFYIWC*EESAAE Trigger: TTCTGCTGCAGACTCTTCTCAACACCAGATGTAGAA...CAACACCAGATGTAGAAGAGTCATTCCTTGAAGGACAACTGTGTCTACCTGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126214.8 ENSMUST00000232648.2 |
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| 3UTR-3UTR GCA 90 bp | TTGGGAACGCTAAGCAGCAAGCTGCAGTGCCTTTTCCTCTTTAGCAGAATTATGCTGTCTGATAGAGAATaGATGAAAAATAGCACGTGC | + |
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Preference number: 2 (lower is better) Translates to: LGTLSSKLQCLFLFSRIMLSDRE*MKNSTC Trigger: GCACGTGCTATTTTTCATGCATTCTCTATCAGACAG...CATAATTCTGCTAAAGAGGAAAAGGCACTGCAGCTTGCTGCTTAGCGTTCCCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000126214.8 ENSMUST00000232648.2 |
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| 3UTR-3UTR GCA 90 bp | AGAACTTACGATAGCCATACAGAGAAACTTCTGAAAGAACCCCATGCCATTGTTTCTGAAAGAACCCCATaGCATTGTTTCTGGCCTGCA | + |
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Preference number: 2 (lower is better) Translates to: RTYDSHTEKLLKEPHAIVSERTP*HCFWPA Trigger: TGCAGGCCAGAAACAATGGCATGGGGTTCTTTCAGA...AACAATGGCATGGGGTTCTTTCAGAAGTTTCTCTGTATGGCTATCGTAAGTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000126214.8 ENSMUST00000232648.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCAGGTAGACACAGTTGTCCTTCAAGGAATGACTCTTCTACATCTGGTGTTGAGCAGCTTAGGCAAATaGCATGCTAAAACTGCCATG | + |
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Preference number: 2 (lower is better) Translates to: FQVDTVVLQGMTLLHLVLSSLGK*HAKTAM Trigger: CATGGCAGTTTTAGCATGCCATTTGCCTAAGCTGCT...CAACACCAGATGTAGAAGAGTCATTCCTTGAAGGACAACTGTGTCTACCTGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126214.8 ENSMUST00000232648.2 |
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| 3UTR-3UTR CCA 90 bp | CAGTCTCAAGGTGATCGTTCCAAAAATACCCTTCCTTTCAAAAGTGAGCAGGTTGCTAAGACACAGACCTaGGAGTTGGCAGATATTCTT | + |
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Preference number: 2 (lower is better) Translates to: QSQGDRSKNTLPFKSEQVAKTQT*ELADIL Trigger: AAGAATATCTGCCAACTCCCAGGTCTGTGTCTTAGC...AACCTGCTCACTTTTGAAAGGAAGGGTATTTTTGGAACGATCACCTTGAGACTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000232648.2 |
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| 3UTR-3UTR TCA 90 bp | TTGGGAACGCTAAGCAGCAAGCTGCAGTGCCTTTTCCTCTTTAGCAGAATTATGATCCATGATGATAACTaGGTGTGCCATTTGACAAAA | + |
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Preference number: 2 (lower is better) Translates to: LGTLSSKLQCLFLFSRIMIHDDN*VCHLTK Trigger: TTTTGTCAAATGGCACACTCAGTTATCATCATGGAT...CATAATTCTGCTAAAGAGGAAAAGGCACTGCAGCTTGCTGCTTAGCGTTCCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126214.8 ENSMUST00000232648.2 |
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| 3UTR-3UTR TCA 90 bp | TTTCAGGTAGACACAGTTGTCCTTCAAGGAATGACTCTTCTACATCTGGTGTTGCTGATAGAGAATGCATaGAAAATAGCACGTGCACTG | + |
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Preference number: 2 (lower is better) Translates to: FQVDTVVLQGMTLLHLVLLIENA*KIARAL Trigger: CAGTGCACGTGCTATTTTTCATGCATTCTCTATCAG...CAACACCAGATGTAGAAGAGTCATTCCTTGAAGGACAACTGTGTCTACCTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126214.8 ENSMUST00000232648.2 |
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| 3UTR-3UTR TCA 90 bp | TTTCAGGTAGACACAGTTGTCCTTCAAGGAATGACTCTTCTACATCTGGTGTTGTTGTCCTTCAAGGAATaGCTCTTCTACATCTGGTGT | + |
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Preference number: 2 (lower is better) Translates to: FQVDTVVLQGMTLLHLVLLSFKE*LFYIWC Trigger: ACACCAGATGTAGAAGAGTCATTCCTTGAAGGACAA...CAACACCAGATGTAGAAGAGTCATTCCTTGAAGGACAACTGTGTCTACCTGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126214.8 ENSMUST00000232648.2 |
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| 3UTR-3UTR TCA 90 bp | GTAGTTACTAGACCTGAACTTTCTCTAAGGAAACAGTCAGTTGATACTCTTATTGAGTCATTTCTGATGTaGCAGCTTCGTGGTTCCCCC | + |
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Preference number: 2 (lower is better) Translates to: VVTRPELSLRKQSVDTLIESFLM*QLRGSP Trigger: GGGGGAACCACGAAGCTGTCACATCAGAAATGACTC...AATAAGAGTATCAACTGACTGTTTCCTTAGAGAAAGTTCAGGTCTAGTAACTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232648.2 |
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| 3UTR-3UTR TCA 90 bp | ATACCCTTCCTTTCAAAAGTGAGCAGGTTATCCCAGGGTTTCTTCTTGAATGTTGTTCTGAGTCATTTCTaGTGTGACAGCTTCGTGGTT | + |
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Preference number: 2 (lower is better) Translates to: IPFLSKVSRLSQGFFLNVVLSHF*CDSFVV Trigger: AACCACGAAGCTGTCACATCAGAAATGACTCAGAAC...AACATTCAAGAAGAAACCCTGGGATAACCTGCTCACTTTTGAAAGGAAGGGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232648.2 |
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| 3UTR-3UTR TCA 90 bp | CAGTCTCAAGGTGATCGTTCCAAAAATACCCTTCCTTTCAAAAGTGAGCAGGTTGTTGTCCTTGAGTTCTaGGTCATTTCTGATGTGACA | + |
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Preference number: 2 (lower is better) Translates to: QSQGDRSKNTLPFKSEQVVVLEF*VISDVT Trigger: TGTCACATCAGAAATGACTCAGAACTCAAGGACAAC...AACCTGCTCACTTTTGAAAGGAAGGGTATTTTTGGAACGATCACCTTGAGACTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000232648.2 |
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| 3UTR-3UTR GCA 90 bp | CAGTCTCAAGGTGATCGTTCCAAAAATACCCTTCCTTTCAAAAGTGAGCAGGTTGTATCTCAGGTTACATaGACACAAGCTTCATTCCAC | + |
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Preference number: 2 (lower is better) Translates to: QSQGDRSKNTLPFKSEQVVSQVT*TQASFH Trigger: GTGGAATGAAGCTTGTGTGCATGTAACCTGAGATAC...AACCTGCTCACTTTTGAAAGGAAGGGTATTTTTGGAACGATCACCTTGAGACTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000126214.8 ENSMUST00000232648.2 |
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| 3UTR-3UTR GCA 90 bp | TTGGGAACGCTAAGCAGCAAGCTGCAGTGCCTTTTCCTCTTTAGCAGAATTATGATGAAAAATAGCACGTaGACTGGGTTTGATAGTTTC | + |
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Preference number: 2 (lower is better) Translates to: LGTLSSKLQCLFLFSRIMMKNST*TGFDSF Trigger: GAAACTATCAAACCCAGTGCACGTGCTATTTTTCAT...CATAATTCTGCTAAAGAGGAAAAGGCACTGCAGCTTGCTGCTTAGCGTTCCCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000126214.8 ENSMUST00000232648.2 |
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| 3UTR-3UTR CCA 90 bp | AACACAGATGAAAATACTGATACAGAACAGTCTCAAGGTGATCGTTCCAAAAATTTCTACCCATCCTGCTaGCCCAGAGTCTGGAACTCT | + |
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Preference number: 2 (lower is better) Translates to: NTDENTDTEQSQGDRSKNFYPSC*PRVWNS Trigger: AGAGTTCCAGACTCTGGGCCAGCAGGATGGGTAGAA...ATTTTTGGAACGATCACCTTGAGACTGTTCTGTATCAGTATTTTCATCTGTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000232648.2 |
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| 3UTR-3UTR GCA 90 bp | ATACCCTTCCTTTCAAAAGTGAGCAGGTTATCCCAGGGTTTCTTCTTGAATGTTGTATCTCAGGTTACATaGACACAAGCTTCATTCCAC | + |
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Preference number: 2 (lower is better) Translates to: IPFLSKVSRLSQGFFLNVVSQVT*TQASFH Trigger: GTGGAATGAAGCTTGTGTGCATGTAACCTGAGATAC...AACATTCAAGAAGAAACCCTGGGATAACCTGCTCACTTTTGAAAGGAAGGGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126214.8 ENSMUST00000232648.2 |
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| 3UTR-3UTR GCA 90 bp | GGTGATCGTTCCAAAAATACCCTTCCTTTCAAAAGTGAGCAGGTTATCCCAGGGTTGTTTTGTGTGTCATaGTTGGGTATTTACAGTTGT | + |
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Preference number: 2 (lower is better) Translates to: GDRSKNTLPFKSEQVIPGLFCVS*LGIYSC Trigger: ACAACTGTAAATACCCAAGCATGACACACAAAACAA...CCCTGGGATAACCTGCTCACTTTTGAAAGGAAGGGTATTTTTGGAACGATCACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000126214.8 ENSMUST00000232648.2 |
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| 3UTR-3UTR GCA 90 bp | AACACAGATGAAAATACTGATACAGAACAGTCTCAAGGTGATCGTTCCAAAAATTTTTTCTACCCATCCTaGTGGCCCAGAGTCTGGAAC | + |
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Preference number: 2 (lower is better) Translates to: NTDENTDTEQSQGDRSKNFFYPS*WPRVWN Trigger: GTTCCAGACTCTGGGCCAGCAGGATGGGTAGAAAAA...ATTTTTGGAACGATCACCTTGAGACTGTTCTGTATCAGTATTTTCATCTGTGTT 41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000232648.2 |
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| 3UTR-3UTR TCA 90 bp | CAGTCTCAAGGTGATCGTTCCAAAAATACCCTTCCTTTCAAAAGTGAGCAGGTTATAGCTCCACAAGCTTaGATGTATGTAATAGAGACA | + |
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Preference number: 2 (lower is better) Translates to: QSQGDRSKNTLPFKSEQVIAPQA*MYVIET Trigger: TGTCTCTATTACATACATTCAAGCTTGTGGAGCTAT...AACCTGCTCACTTTTGAAAGGAAGGGTATTTTTGGAACGATCACCTTGAGACTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000126214.8 ENSMUST00000232648.2 |
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| 3UTR-3UTR TCA 90 bp | ATACCCTTCCTTTCAAAAGTGAGCAGGTTATCCCAGGGTTTCTTCTTGAATGTTTTGACAAAATTATGCTaGCTGTCACTTCAGTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: IPFLSKVSRLSQGFFLNVLTKLC*LSLQSV Trigger: CACAGACTGAAGTGACAGTCAGCATAATTTTGTCAA...AACATTCAAGAAGAAACCCTGGGATAACCTGCTCACTTTTGAAAGGAAGGGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000126214.8 ENSMUST00000232648.2 |
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| 3UTR-3UTR TCA 90 bp | TGTCTTTGGATATGTACCGCCTTGGAGAAATGTATAAAACTGTTTAATATGTGGCTCATCCGTGCATGCTaGTGGATTCTGTCTGATAGA | + |
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Preference number: 2 (lower is better) Translates to: CLWICTALEKCIKLFNMWLIRAC*WILSDR Trigger: TCTATCAGACAGAATCCATCAGCATGCACGGATGAG...CCACATATTAAACAGTTTTATACATTTCTCCAAGGCGGTACATATCCAAAGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126214.8 ENSMUST00000232648.2 |
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| 3UTR-3UTR TCA 90 bp | ATACCCTTCCTTTCAAAAGTGAGCAGGTTATCCCAGGGTTTCTTCTTGAATGTTTCTTTAGCAGAATTATaGACACACACACACACACAC | + |
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Preference number: 2 (lower is better) Translates to: IPFLSKVSRLSQGFFLNVSLAEL*THTHTH Trigger: GTGTGTGTGTGTGTGTGTTCATAATTCTGCTAAAGA...AACATTCAAGAAGAAACCCTGGGATAACCTGCTCACTTTTGAAAGGAAGGGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126214.8 ENSMUST00000232648.2 |
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| 3UTR-3UTR GCA 90 bp | CAGTCTCAAGGTGATCGTTCCAAAAATACCCTTCCTTTCAAAAGTGAGCAGGTTTTTTGTAGGTCCAATTaGCAAAATCCACACATTTCA | + |
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Preference number: 2 (lower is better) Translates to: QSQGDRSKNTLPFKSEQVFCRSN*QNPHIS Trigger: TGAAATGTGTGGATTTTGGCAATTGGACCTACAAAA...AACCTGCTCACTTTTGAAAGGAAGGGTATTTTTGGAACGATCACCTTGAGACTG 39% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000126214.8 ENSMUST00000232648.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTATACCACATACATTCAACAAGCTTCCTTCACCATGAGACCAATAGCTAAGCTGATTTACATTCTGTaGTTAGATAAAGGCTGCGCT | + |
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Preference number: 2 (lower is better) Translates to: SYTTYIQQASFTMRPIAKLIYIL*LDKGCA Trigger: AGCGCAGCCTTTATCTAACCACAGAATGTAAATCAG...CTTAGCTATTGGTCTCATGGTGAAGGAAGCTTGTTGAATGTATGTGGTATAAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134710.3 |
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| 3UTR-3UTR TCA 90 bp | AACACAGATGAAAATACTGATACAGAACAGTCTCAAGGTGATCGTTCCAAAAATCTGATAGAGAATGCATaGAAAATAGCACGTGCACTG | + |
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Preference number: 2 (lower is better) Translates to: NTDENTDTEQSQGDRSKNLIENA*KIARAL Trigger: CAGTGCACGTGCTATTTTTCATGCATTCTCTATCAG...ATTTTTGGAACGATCACCTTGAGACTGTTCTGTATCAGTATTTTCATCTGTGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000126214.8 ENSMUST00000232648.2 |
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| 3UTR-3UTR GCA 90 bp | ATACCCTTCCTTTCAAAAGTGAGCAGGTTATCCCAGGGTTTCTTCTTGAATGTTTTTTGTAGGTCCAATTaGCAAAATCCACACATTTCA | + |
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Preference number: 2 (lower is better) Translates to: IPFLSKVSRLSQGFFLNVFCRSN*QNPHIS Trigger: TGAAATGTGTGGATTTTGGCAATTGGACCTACAAAA...AACATTCAAGAAGAAACCCTGGGATAACCTGCTCACTTTTGAAAGGAAGGGTAT 38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000126214.8 ENSMUST00000232648.2 |
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| 3UTR-3UTR TCA 90 bp | GTAGTTACTAGACCTGAACTTTCTCTAAGGAAACAGTCAGTTGATACTCTTATTTTGACAAAATTATGCTaGCTGTCACTTCAGTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: VVTRPELSLRKQSVDTLILTKLC*LSLQSV Trigger: CACAGACTGAAGTGACAGTCAGCATAATTTTGTCAA...AATAAGAGTATCAACTGACTGTTTCCTTAGAGAAAGTTCAGGTCTAGTAACTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000126214.8 ENSMUST00000232648.2 |
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| 3UTR-3UTR TCA 90 bp | GTAGTTACTAGACCTGAACTTTCTCTAAGGAAACAGTCAGTTGATACTCTTATTACTGAGTGTGCCATTTaGCAAAATTATGCTGACTGT | + |
|
Preference number: 2 (lower is better) Translates to: VVTRPELSLRKQSVDTLITECAI*QNYADC Trigger: ACAGTCAGCATAATTTTGTCAAATGGCACACTCAGT...AATAAGAGTATCAACTGACTGTTTCCTTAGAGAAAGTTCAGGTCTAGTAACTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126214.8 ENSMUST00000232648.2 |
||
| 3UTR-3UTR CCA 90 bp | TTCGATCAGACCTACAAAATCATACAGGGTTTCTATAAGAATATTGGGCTACAATTTCACTTGCCTCCATaGAAAAATAATGCTTGGCCT | + |
|
Preference number: 2 (lower is better) Translates to: FDQTYKIIQGFYKNIGLQFHLPP*KNNAWP Trigger: AGGCCAAGCATTATTTTTCCATGGAGGCAAGTGAAA...TTGTAGCCCAATATTCTTATAGAAACCCTGTATGATTTTGTAGGTCTGATCGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067307.11 |
||
| 3UTR-3UTR GCA 90 bp | TGTCTTTGGATATGTACCGCCTTGGAGAAATGTATAAAACTGTTTAATATGTGGTTGTTTTGTGTGTCATaGTTGGGTATTTACAGTTGT | + |
|
Preference number: 2 (lower is better) Translates to: CLWICTALEKCIKLFNMWLFCVS*LGIYSC Trigger: ACAACTGTAAATACCCAAGCATGACACACAAAACAA...CCACATATTAAACAGTTTTATACATTTCTCCAAGGCGGTACATATCCAAAGACA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000126214.8 ENSMUST00000232648.2 |
||
| 3UTR GCA 72 bp | CTGGGTGGCTGTCCAAATCTGCCTGTGAAGGTGGAGTaGTGTCGGGACAGAGCTGCTGGGTCCTTTGGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: LGGCPNLPVKVE*CRDRAAGSFGF Trigger: AAAACCAAAGGACCCAGCAGCTCTGTCCCGACAGCACTCCACCTTCACAGGCAGATTTGGACAGCCACCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232648.2 |
||
| 3UTR CCA 72 bp | ATGAGTGTCTTCTGGGCACTGTGCAGTTTGATACGGTaGGGCTATTATAGGGAAAGAAAGGGACCCACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: MSVFWALCSLIR*GYYRERKGPTE Trigger: CTCTGTGGGTCCCTTTCTTTCCCTATAATAGCCCCACCGTATCAAACTGCACAGTGCCCAGAAGACACTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134710.3 |
||
| 3UTR-3UTR CAA 90 bp | GGTGATCGTTCCAAAAATACCCTTCCTTTCAAAAGTGAGCAGGTTATCCCAGGGGCACGTGCACTGGGTTaGATAGTTTCATTCCATCCA | + |
|
Preference number: 3 (lower is better) Translates to: GDRSKNTLPFKSEQVIPGARALG*IVSFHP Trigger: TGGATGGAATGAAACTATCAAACCCAGTGCACGTGC...CCCTGGGATAACCTGCTCACTTTTGAAAGGAAGGGTATTTTTGGAACGATCACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000126214.8 ENSMUST00000232648.2 |
||
| 3UTR TCA 72 bp | TTCAGAAAGCTCTGTCCCATAGTTGTCCTTGAGTTCTaGGTCATTTCTGATGTGACAGCTTCGTGGTTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: FRKLCPIVVLEF*VISDVTASWFP Trigger: GGGGAACCACGAAGCTGTCACATCAGAAATGACTCAGAACTCAAGGACAACTATGGGACAGAGCTTTCTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232648.2 |
||
| 3UTR CCA 72 bp | AGAGAAACTTCTGAAAGAACCCCATGCCATTGTTTCTaGCCTGCACTAACGTCATGGGCTTGCACCTTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: RETSERTPCHCF*PALTSWACTFY Trigger: ATAGAAGGTGCAAGCCCATGACGTTAGTGCAGGCCAGAAACAATGGCATGGGGTTCTTTCAGAAGTTTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126214.8 ENSMUST00000232648.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTGATCGTTCCAAAAATACCCTTCCTTTCAAAAGTGAGCAGGTTATCCCAGGGCATGTCATTTCCCATTaGTTCGTCTCATCCGTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: GDRSKNTLPFKSEQVIPGHVISH*FVSSVH Trigger: ATGCACGGATGAGACGAACAAATGGGAAATGACATG...CCCTGGGATAACCTGCTCACTTTTGAAAGGAAGGGTATTTTTGGAACGATCACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000126214.8 ENSMUST00000232648.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTCAGGTAGACACAGTTGTCCTTCAAGGAATGACTCTTCTACATCTGGTGTTGCCTGGCATCATGTCTTaGGATATGTACCGCCTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: FQVDTVVLQGMTLLHLVLPGIMS*DMYRLG Trigger: TCCAAGGCGGTACATATCCAAAGACATGATGCCAGG...CAACACCAGATGTAGAAGAGTCATTCCTTGAAGGACAACTGTGTCTACCTGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126214.8 ENSMUST00000232648.2 |
||
| 3UTR TCA 72 bp | GCAAGCTGCAGTGCCTTTTCCTCTTTAGCAGAATTATaGACACACACACACACACACACACACACACACACA | + |
|
Preference number: 3 (lower is better) Translates to: ASCSAFSSLAEL*THTHTHTHTHT Trigger: TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCATAATTCTGCTAAAGAGGAAAAGGCACTGCAGCTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126214.8 ENSMUST00000232648.2 |
||
| 3UTR TCA 72 bp | TTAGAACATACCCAGTGTCACCTCCTGGTGTTAATGTaGCAGGGAGAGGTTACAAATAGTCCAGTTCATCCT | + |
|
Preference number: 3 (lower is better) Translates to: LEHTQCHLLVLM*QGEVTNSPVHP Trigger: AGGATGAACTGGACTATTTGTAACCTCTCCCTGTCACATTAACACCAGGAGGTGACACTGGGTATGTTCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134710.3 |
||
| 3UTR CCA 72 bp | TTCCTTGTCCTTCAAGAAATTGCTAAGACACAGACCTaGGAGTTGGCAGATATTCTTGTAGGGACTTGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: FLVLQEIAKTQT*ELADILVGTCL Trigger: CAGACAAGTCCCTACAAGAATATCTGCCAACTCCCAGGTCTGTGTCTTAGCAATTTCTTGAAGGACAAGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232648.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGTCTCAAGGTGATCGTTCCAAAAATACCCTTCCTTTCAAAAGTGAGCAGGTTCATGTCATTTCCCATTaGTTCGTCTCATCCGTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: QSQGDRSKNTLPFKSEQVHVISH*FVSSVH Trigger: ATGCACGGATGAGACGAACAAATGGGAAATGACATG...AACCTGCTCACTTTTGAAAGGAAGGGTATTTTTGGAACGATCACCTTGAGACTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000126214.8 ENSMUST00000232648.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAACTTACGATAGCCATACAGAGAAACTTCTGAAAGAACCCCATGCCATTGTTCTTCTACATCTGGTGTaGAGAAGAGTCTGCAGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: RTYDSHTEKLLKEPHAIVLLHLV*RRVCSR Trigger: TCTGCTGCAGACTCTTCTCAACACCAGATGTAGAAG...AACAATGGCATGGGGTTCTTTCAGAAGTTTCTCTGTATGGCTATCGTAAGTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126214.8 ENSMUST00000232648.2 |
||
| 3UTR CCA 72 bp | TGGCCCAGAGTCTGGAACTCTGTTGTATGTAAATTGTaGTGGAGAAAAACATTCTTCCTGCTGTATGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: WPRVWNSVVCKL*WRKTFFLLYVC Trigger: ACACACATACAGCAGGAAGAATGTTTTTCTCCACCACAATTTACATACAACAGAGTTCCAGACTCTGGGCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232648.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGGGAACGCTAAGCAGCAAGCTGCAGTGCCTTTTCCTCTTTAGCAGAATTATGAATAGCTCCACAAGCTaGAATGTATGTAATAGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: LGTLSSKLQCLFLFSRIMNSSTS*NVCNRD Trigger: GTCTCTATTACATACATTCAAGCTTGTGGAGCTATT...CATAATTCTGCTAAAGAGGAAAAGGCACTGCAGCTTGCTGCTTAGCGTTCCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126214.8 ENSMUST00000232648.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTCAGGTAGACACAGTTGTCCTTCAAGGAATGACTCTTCTACATCTGGTGTTGGAGTCTGGAACTCTGTaGTATGTAAATTGTGGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: FQVDTVVLQGMTLLHLVLESGTL*YVNCGG Trigger: TCCACCACAATTTACATACAACAGAGTTCCAGACTC...CAACACCAGATGTAGAAGAGTCATTCCTTGAAGGACAACTGTGTCTACCTGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232648.2 |
||
| 3UTR TCA 72 bp | GTGCATGCTGATGGATTCTGTCTGATAGAGAATGCATaGAAAATAGCACGTGCACTGGGTTTGATAGTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: VHADGFCLIENA*KIARALGLIVS Trigger: TGAAACTATCAAACCCAGTGCACGTGCTATTTTTCATGCATTCTCTATCAGACAGAATCCATCAGCATGCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126214.8 ENSMUST00000232648.2 |
||
| 3UTR CCA 72 bp | TTGTTCATAGGGTATAGATTTTTCTACCCATCCTGCTaGCCCAGAGTCTGGAACTCTGTTGTATGTAAATTG | + |
|
Preference number: 3 (lower is better) Translates to: LFIGYRFFYPSC*PRVWNSVVCKL Trigger: CAATTTACATACAACAGAGTTCCAGACTCTGGGCCAGCAGGATGGGTAGAAAAATCTATACCCTATGAACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232648.2 |
||
| 3UTR-3UTR CAA 90 bp | ATACCCTTCCTTTCAAAAGTGAGCAGGTTATCCCAGGGTTTCTTCTTGAATGTTAAAACACAAGAGAGCTaGCGTGATGTACATGTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: IPFLSKVSRLSQGFFLNVKTQES*RDVHVF Trigger: GAAGACATGTACATCACGCAAGCTCTCTTGTGTTTT...AACATTCAAGAAGAAACCCTGGGATAACCTGCTCACTTTTGAAAGGAAGGGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000126214.8 ENSMUST00000232648.2 |
||
| 3UTR-3UTR CAA 90 bp | GTAGTTACTAGACCTGAACTTTCTCTAAGGAAACAGTCAGTTGATACTCTTATTACACAGACCTGGGAGTaGGCAGATATTCTTGTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: VVTRPELSLRKQSVDTLITQTWE*ADILVG Trigger: CCCTACAAGAATATCTGCCAACTCCCAGGTCTGTGT...AATAAGAGTATCAACTGACTGTTTCCTTAGAGAAAGTTCAGGTCTAGTAACTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232648.2 |
||
| 3UTR TCA 72 bp | TGTCATTTCCCATTTGTTCGTCTCATCCGTGCATGCTaGTGGATTCTGTCTGATAGAGAATGCATGAAAAAT | + |
|
Preference number: 3 (lower is better) Translates to: CHFPFVRLIRAC*WILSDRECMKN Trigger: ATTTTTCATGCATTCTCTATCAGACAGAATCCATCAGCATGCACGGATGAGACGAACAAATGGGAAATGACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000126214.8 ENSMUST00000232648.2 |
||
| 3UTR TCA 72 bp | TGCTTAGAGCTAAACATAAAAGTAGTAAAATGGGCATaGCCACTCTTAGGTGACACATGGAACAGTAGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: CLELNIKVVKWA*PLLGDTWNSSH Trigger: ATGACTACTGTTCCATGTGTCACCTAAGAGTGGTCATGCCCATTTTACTACTTTTATGTTTAGCTCTAAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000126214.8 ENSMUST00000232648.2 |
||
| 3UTR GCA 72 bp | ATTCTGTCTGATAGAGAATGCATGAAAAATAGCACGTaGACTGGGTTTGATAGTTTCATTCCATCCACTGTA | + |
|
Preference number: 3 (lower is better) Translates to: ILSDRECMKNST*TGFDSFIPSTV Trigger: TACAGTGGATGGAATGAAACTATCAAACCCAGTGCACGTGCTATTTTTCATGCATTCTCTATCAGACAGAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000126214.8 ENSMUST00000232648.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCGATCAGACCTACAAAATCATACAGGGTTTCTATAAGAATATTGGGCTACAAGGTTCTTTGGTTTGTTaGTTATTTCACTTGCCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: FDQTYKIIQGFYKNIGLQGSLVC*LFHLPP Trigger: TGGAGGCAAGTGAAATAACAAACAAACCAAAGAACC...TTGTAGCCCAATATTCTTATAGAAACCCTGTATGATTTTGTAGGTCTGATCGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067307.11 |
||
| 3UTR-3UTR CAA 90 bp | CAGACCTACAAAATCATACAGGGTTTCTATAAGAATATTGGGCTACAATACACTGAAGGGTTCTTTGGTTaGTTTGTTATTTCACTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: QTYKIIQGFYKNIGLQYTEGFFG*FVISLA Trigger: GGCAAGTGAAATAACAAACAAACCAAAGAACCCTTC...AGTGTATTGTAGCCCAATATTCTTATAGAAACCCTGTATGATTTTGTAGGTCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067307.11 |
||
| 3UTR-3UTR CAA 90 bp | GTAGTTACTAGACCTGAACTTTCTCTAAGGAAACAGTCAGTTGATACTCTTATTAATAGCTCCACAAGCTaGAATGTATGTAATAGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: VVTRPELSLRKQSVDTLINSSTS*NVCNRD Trigger: GTCTCTATTACATACATTCAAGCTTGTGGAGCTATT...AATAAGAGTATCAACTGACTGTTTCCTTAGAGAAAGTTCAGGTCTAGTAACTAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126214.8 ENSMUST00000232648.2 |
||
| CDS-3UTR TCA 90 bp | AGCCCAGTGGCCCACCTACTGAACAACTTCCTGCCCATAACACTGAATGATCCTAGGGCTGATGGGAAGTaGGGTGGTACTGCTGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SPVAHLLNNFLPITLNDPRADGK*GGTAGR Trigger: CCTTCCAGCAGTACCACCTCACTTCCCATCAGCCCT...AGGATCATTCAGTGTTATGGGCAGGAAGTTGTTCAGTAGGTGGGCCACTGGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134710.3 |
||
| CDS-3UTR CCA 90 bp | CTCCAGAGCCCAGTGGCCCACCTACTGAACAACTTCCTGCCCATAACACTGAATGTGAGGTGGTACTGCTaGAAGGGCTCACATCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: LQSPVAHLLNNFLPITLNVRWYC*KGSHHS Trigger: AGAGTGATGTGAGCCCTTCCAGCAGTACCACCTCAC...ATTCAGTGTTATGGGCAGGAAGTTGTTCAGTAGGTGGGCCACTGGGCTCTGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134710.3 |
||
| CDS-3UTR TCA 90 bp | GCCTTTCATGAGTGTCTTCTGGGCACTGTGCAGTTTGATACGGTGGGGCTATTACTTCAGTCAGAGGGCTaGTGGGAAGTGAGGTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: AFHECLLGTVQFDTVGLLLQSEG*WEVRWY Trigger: GTACCACCTCACTTCCCATCAGCCCTCTGACTGAAG...TAATAGCCCCACCGTATCAAACTGCACAGTGCCCAGAAGACACTCATGAAAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134710.3 |
||
| CDS-3UTR GCA 90 bp | GGTGATCGTTCCAAAAATACCCTTCCTTTCAAAAGTGAGCAGGTTATCCCAGGGCTGCTGGGGCCAATCTaGAGAGGGACTGTTGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GDRSKNTLPFKSEQVIPGLLGPI*RGTVGH Trigger: ATGCCCAACAGTCCCTCTGCAGATTGGCCCCAGCAG...CCCTGGGATAACCTGCTCACTTTTGAAAGGAAGGGTATTTTTGGAACGATCACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR GCA 90 bp | ATTAGAACATACCCAGTGTCACCTCCTGGTGTTAATGTGACAGGGAGAGGTTACCTGCTGGGGCCAATCTaGAGAGGGACTGTTGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: IRTYPVSPPGVNVTGRGYLLGPI*RGTVGH Trigger: ATGCCCAACAGTCCCTCTGCAGATTGGCCCCAGCAG...GTAACCTCTCCCTGTCACATTAACACCAGGAGGTGACACTGGGTATGTTCTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134710.3 |
||
| CDS-3UTR CCA 90 bp | TTCTGGGCACTGTGCAGTTTGATACGGTGGGGCTATTATAGGGAAAGAAAGGGAACTGCCGTGCACTCCTaGAGCATCAGTCTGAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: FWALCSLIRWGYYRERKGTAVHS*SISLNG Trigger: GCCATTCAGACTGATGCTCCAGGAGTGCACGGCAGT...TCCCTTTCTTTCCCTATAATAGCCCCACCGTATCAAACTGCACAGTGCCCAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134710.3 |
||
| CDS-3UTR CCA 90 bp | GGTGATCGTTCCAAAAATACCCTTCCTTTCAAAAGTGAGCAGGTTATCCCAGGGCATGGGCAGCCCTTCTaGCTTAGCTGCTGCCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GDRSKNTLPFKSEQVIPGHGQPF*LSCCLQ Trigger: CTGAAGGCAGCAGCTAAGCCAGAAGGGCTGCCCATG...CCCTGGGATAACCTGCTCACTTTTGAAAGGAAGGGTATTTTTGGAACGATCACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR TCA 90 bp | TCTCCAGAGCCCAGTGGCCCACCTACTGAACAACTTCCTGCCCATAACACTGAACTCTTGTTATATCCTTaGAAGGCAGTGGCTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SPEPSGPPTEQLPAHNTELLLYP*KAVALQ Trigger: CTGAAGAGCCACTGCCTTTCAAGGATATAACAAGAG...TTCAGTGTTATGGGCAGGAAGTTGTTCAGTAGGTGGGCCACTGGGCTCTGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134710.3 |
||
| CDS-3UTR TCA 90 bp | CAGTCTCAAGGTGATCGTTCCAAAAATACCCTTCCTTTCAAAAGTGAGCAGGTTCTGGATCCACTGGGCTaGGAAGAACGGCTGTACAGG | + |
|
Preference number: 4 (lower is better) Translates to: QSQGDRSKNTLPFKSEQVLDPLG*EERLYR Trigger: CCTGTACAGCCGTTCTTCTCAGCCCAGTGGATCCAG...AACCTGCTCACTTTTGAAAGGAAGGGTATTTTTGGAACGATCACCTTGAGACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR TCA 90 bp | TTCTGGGCACTGTGCAGTTTGATACGGTGGGGCTATTATAGGGAAAGAAAGGGACCTGAAGCTGAGAAATaGGCTCATCCCTGTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FWALCSLIRWGYYRERKGPEAEK*AHPCPS Trigger: TGAAGGACAGGGATGAGCTCATTTCTCAGCTTCAGG...TCCCTTTCTTTCCCTATAATAGCCCCACCGTATCAAACTGCACAGTGCCCAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134710.3 |
||
| CDS-3UTR GCA 90 bp | GCCTTTCATGAGTGTCTTCTGGGCACTGTGCAGTTTGATACGGTGGGGCTATTACACCTTTTCCAGCTCTaGCTGAAGCTGAGAAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: AFHECLLGTVQFDTVGLLHLFQL*LKLRNE Trigger: CTCATTTCTCAGCTTCAGGCAGAGCTGGAAAAGGTG...TAATAGCCCCACCGTATCAAACTGCACAGTGCCCAGAAGACACTCATGAAAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134710.3 |
||
| CDS-3UTR GCA 90 bp | GCGCTCACTTGTTCCATTAGAACATACCCAGTGTCACCTCCTGGTGTTAATGTGGCCTTCTGTAAATGCTaGACCTTTTCCAGCTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: ALTCSIRTYPVSPPGVNVAFCKC*TFSSSA Trigger: GGCAGAGCTGGAAAAGGTGCAGCATTTACAGAAGGC...CACATTAACACCAGGAGGTGACACTGGGTATGTTCTAATGGAACAAGTGAGCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134710.3 |
||
| 3UTR CAA 72 bp | GTGCCTTTCATGAGTGTCTTCTGGGCACTGTGCAGTTaGATACGGTGGGGCTATTATAGGGAAAGAAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VPFMSVFWALCS*IRWGYYRERKG Trigger: TCCCTTTCTTTCCCTATAATAGCCCCACCGTATCAAACTGCACAGTGCCCAGAAGACACTCATGAAAGGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134710.3 |
||
| CDS-3UTR TCA 90 bp | TTTCAGGTAGACACAGTTGTCCTTCAAGGAATGACTCTTCTACATCTGGTGTTGCTTCAGTCAGAGGGCTaGTGGGAAGTGAGGTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: FQVDTVVLQGMTLLHLVLLQSEG*WEVRWY Trigger: GTACCACCTCACTTCCCATCAGCCCTCTGACTGAAG...CAACACCAGATGTAGAAGAGTCATTCCTTGAAGGACAACTGTGTCTACCTGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR TCA 90 bp | GGTGATCGTTCCAAAAATACCCTTCCTTTCAAAAGTGAGCAGGTTATCCCAGGGCCTGAAGCTGAGAAATaGGCTCATCCCTGTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GDRSKNTLPFKSEQVIPGPEAEK*AHPCPS Trigger: TGAAGGACAGGGATGAGCTCATTTCTCAGCTTCAGG...CCCTGGGATAACCTGCTCACTTTTGAAAGGAAGGGTATTTTTGGAACGATCACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR TCA 90 bp | CAGTCTCAAGGTGATCGTTCCAAAAATACCCTTCCTTTCAAAAGTGAGCAGGTTTTTTCCCGTGCTCCCTaGGCTCGAGTTAGTGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QSQGDRSKNTLPFKSEQVFSRAP*ARVSAG Trigger: TCCAGCACTAACTCGAGCTCAGGGAGCACGGGAAAA...AACCTGCTCACTTTTGAAAGGAAGGGTATTTTTGGAACGATCACCTTGAGACTG 48% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR TCA 90 bp | TTGGGAACGCTAAGCAGCAAGCTGCAGTGCCTTTTCCTCTTTAGCAGAATTATGGTCCTTTGGTTTTTCTaGGAACATGGGCAGCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LGTLSSKLQCLFLFSRIMVLWFF*EHGQPF Trigger: GAAGGGCTGCCCATGTTCTCAGAAAAACCAAAGGAC...CATAATTCTGCTAAAGAGGAAAAGGCACTGCAGCTTGCTGCTTAGCGTTCCCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR GCA 90 bp | CAGTCTCAAGGTGATCGTTCCAAAAATACCCTTCCTTTCAAAAGTGAGCAGGTTTTTTCCTCCACACCCTaGTGGGGCCAATCTGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QSQGDRSKNTLPFKSEQVFSSTP*WGQSAE Trigger: CTCTGCAGATTGGCCCCAGCAGGGTGTGGAGGAAAA...AACCTGCTCACTTTTGAAAGGAAGGGTATTTTTGGAACGATCACCTTGAGACTG 48% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR GCA 90 bp | TTGGGAACGCTAAGCAGCAAGCTGCAGTGCCTTTTCCTCTTTAGCAGAATTATGGCCTTCTGTAAATGCTaGACCTTTTCCAGCTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LGTLSSKLQCLFLFSRIMAFCKC*TFSSSA Trigger: GGCAGAGCTGGAAAAGGTGCAGCATTTACAGAAGGC...CATAATTCTGCTAAAGAGGAAAAGGCACTGCAGCTTGCTGCTTAGCGTTCCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR GCA 90 bp | GGTGATCGTTCCAAAAATACCCTTCCTTTCAAAAGTGAGCAGGTTATCCCAGGGTTCTGGCTTAGCTGCTaGCTTCAGAAAGCTCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GDRSKNTLPFKSEQVIPGFWLSC*LQKALS Trigger: GGACAGAGCTTTCTGAAGGCAGCAGCTAAGCCAGAA...CCCTGGGATAACCTGCTCACTTTTGAAAGGAAGGGTATTTTTGGAACGATCACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR CCA 90 bp | ATTAGAACATACCCAGTGTCACCTCCTGGTGTTAATGTGACAGGGAGAGGTTACATCCTTGAAAGGCAGTaGCTCTTCAGTCAGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IRTYPVSPPGVNVTGRGYILERQ*LFSQRA Trigger: AGCCCTCTGACTGAAGAGCCACTGCCTTTCAAGGAT...GTAACCTCTCCCTGTCACATTAACACCAGGAGGTGACACTGGGTATGTTCTAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134710.3 |
||
| CDS-3UTR CCA 90 bp | CTCCAGAGCCCAGTGGCCCACCTACTGAACAACTTCCTGCCCATAACACTGAATGAAGTTCAGTCTGCGTaGATTTATCTACTCTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LQSPVAHLLNNFLPITLNEVQSA*IYLLLK Trigger: CTTCAAGAGTAGATAAATCCACGCAGACTGAACTTC...ATTCAGTGTTATGGGCAGGAAGTTGTTCAGTAGGTGGGCCACTGGGCTCTGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134710.3 |
||
| CDS-3UTR CCA 90 bp | GTAGTTACTAGACCTGAACTTTCTCTAAGGAAACAGTCAGTTGATACTCTTATTAGGAGCCCAGTGTCCTaGGCGAGCCTGTCCTCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: VVTRPELSLRKQSVDTLIRSPVS*ASLSSA Trigger: CGCTGAGGACAGGCTCGCCCAGGACACTGGGCTCCT...AATAAGAGTATCAACTGACTGTTTCCTTAGAGAAAGTTCAGGTCTAGTAACTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR TCA 90 bp | GGTGATCGTTCCAAAAATACCCTTCCTTTCAAAAGTGAGCAGGTTATCCCAGGGCGGCAAACTGGGGGTTaGAGATTCTGTTCCTCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: GDRSKNTLPFKSEQVIPGRQTGG*RFCSSK Trigger: TTTAGAGGAACAGAATCTTCAACCCCCAGTTTGCCG...CCCTGGGATAACCTGCTCACTTTTGAAAGGAAGGGTATTTTTGGAACGATCACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR TCA 90 bp | GGTGATCGTTCCAAAAATACCCTTCCTTTCAAAAGTGAGCAGGTTATCCCAGGGGAAGTGGATTGGCTCTaGGGAACCGACTTACAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GDRSKNTLPFKSEQVIPGEVDWL*GTDLQN Trigger: GTTTTGTAAGTCGGTTCCTCAGAGCCAATCCACTTC...CCCTGGGATAACCTGCTCACTTTTGAAAGGAAGGGTATTTTTGGAACGATCACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR TCA 90 bp | TTTCAGGTAGACACAGTTGTCCTTCAAGGAATGACTCTTCTACATCTGGTGTTGAATTCTGAAGGGGTCTaGGCTGTGGTCAGGTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FQVDTVVLQGMTLLHLVLNSEGV*AVVRSA Trigger: TGCTGACCTGACCACAGCTCAGACCCCTTCAGAATT...CAACACCAGATGTAGAAGAGTCATTCCTTGAAGGACAACTGTGTCTACCTGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR GCA 90 bp | CTGCGCTCACTTGTTCCATTAGAACATACCCAGTGTCACCTCCTGGTGTTAATGCTCACATCACTCTCTTaGAGCACTCTCTTCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LRSLVPLEHTQCHLLVLMLTSLS*STLFIF Trigger: GAAGATGAAGAGAGTGCTGCAAGAGAGTGATGTGAG...CATTAACACCAGGAGGTGACACTGGGTATGTTCTAATGGAACAAGTGAGCGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134710.3 |
||
| CDS-3UTR GCA 90 bp | CAGTCTCAAGGTGATCGTTCCAAAAATACCCTTCCTTTCAAAAGTGAGCAGGTTCTGCTGGCTTCCACATaGCCATCCTTCGGCTTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: QSQGDRSKNTLPFKSEQVLLAST*PSFGFK Trigger: CTTAAAGCCGAAGGATGGGCATGTGGAAGCCAGCAG...AACCTGCTCACTTTTGAAAGGAAGGGTATTTTTGGAACGATCACCTTGAGACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR GCA 90 bp | TTGGGAACGCTAAGCAGCAAGCTGCAGTGCCTTTTCCTCTTTAGCAGAATTATGCATTTCCATAAGCTGTaGCCTCTCTCCCTCCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LGTLSSKLQCLFLFSRIMHFHKL*PLSLLV Trigger: TACAAGGAGGGAGAGAGGGCACAGCTTATGGAAATG...CATAATTCTGCTAAAGAGGAAAAGGCACTGCAGCTTGCTGCTTAGCGTTCCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232648.2 |
||
| CDS-3UTR CCA 90 bp | AGAACTTACGATAGCCATACAGAGAAACTTCTGAAAGAACCCCATGCCATTGTTCACCAGCGGTGTTGCTaGAGGAAGGTGAAGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RTYDSHTEKLLKEPHAIVHQRCC*RKVKKA Trigger: TGCCTTCTTCACCTTCCTCCAGCAACACCGCTGGTG...AACAATGGCATGGGGTTCTTTCAGAAGTTTCTCTGTATGGCTATCGTAAGTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR CCA 90 bp | GGTGATCGTTCCAAAAATACCCTTCCTTTCAAAAGTGAGCAGGTTATCCCAGGGTCACTGCCCTTCTTATaGTGGAAGCTGATAGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GDRSKNTLPFKSEQVIPGSLPFL*WKLIEG Trigger: TCCCTCTATCAGCTTCCACCATAAGAAGGGCAGTGA...CCCTGGGATAACCTGCTCACTTTTGAAAGGAAGGGTATTTTTGGAACGATCACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR CCA 90 bp | GGTGATCGTTCCAAAAATACCCTTCCTTTCAAAAGTGAGCAGGTTATCCCAGGGGCTGTATCAATGAAGTaGATTGGCTCTGAGGAACCG | + |
|
Preference number: 4 (lower is better) Translates to: GDRSKNTLPFKSEQVIPGAVSMK*IGSEEP Trigger: CGGTTCCTCAGAGCCAATCCACTTCATTGATACAGC...CCCTGGGATAACCTGCTCACTTTTGAAAGGAAGGGTATTTTTGGAACGATCACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR CCA 90 bp | CAGTCTCAAGGTGATCGTTCCAAAAATACCCTTCCTTTCAAAAGTGAGCAGGTTGCGGCTTCCTGCTCTTaGTATTGTGCAATTGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QSQGDRSKNTLPFKSEQVAASCS*YCAIAS Trigger: GCTGGCAATTGCACAATACCAAGAGCAGGAAGCCGC...AACCTGCTCACTTTTGAAAGGAAGGGTATTTTTGGAACGATCACCTTGAGACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR TCA 90 bp | GGTGATCGTTCCAAAAATACCCTTCCTTTCAAAAGTGAGCAGGTTATCCCAGGGAAACTTATAGTGAGATaGGAAGGACTTGGGGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GDRSKNTLPFKSEQVIPGKLIVR*EGLGEQ Trigger: CTGCTCCCCAAGTCCTTCTCATCTCACTATAAGTTT...CCCTGGGATAACCTGCTCACTTTTGAAAGGAAGGGTATTTTTGGAACGATCACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR TCA 90 bp | TTTCAGGTAGACACAGTTGTCCTTCAAGGAATGACTCTTCTACATCTGGTGTTGCAAGGCCAAAAATTCTaGAGGGGTCTGAGCTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FQVDTVVLQGMTLLHLVLQGQKF*RGLSCG Trigger: ACCACAGCTCAGACCCCTTCAGAATTTTTGGCCTTG...CAACACCAGATGTAGAAGAGTCATTCCTTGAAGGACAACTGTGTCTACCTGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR TCA 90 bp | ATACCCTTCCTTTCAAAAGTGAGCAGGTTATCCCAGGGTTTCTTCTTGAATGTTAGACTGGAAGTGGGCTaGGAGGTAGCATCATTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: IPFLSKVSRLSQGFFLNVRLEVG*EVASLW Trigger: CCACAATGATGCTACCTCTCAGCCCACTTCCAGTCT...AACATTCAAGAAGAAACCCTGGGATAACCTGCTCACTTTTGAAAGGAAGGGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR TCA 90 bp | ATACCCTTCCTTTCAAAAGTGAGCAGGTTATCCCAGGGTTTCTTCTTGAATGTTAGCAGGGGTCTCTGGTaGAGAATGCAGTTCAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: IPFLSKVSRLSQGFFLNVSRGLW*RMQFSA Trigger: AGCACTGAACTGCATTCTTCACCAGAGACCCCTGCT...AACATTCAAGAAGAAACCCTGGGATAACCTGCTCACTTTTGAAAGGAAGGGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR TCA 90 bp | CAGTCTCAAGGTGATCGTTCCAAAAATACCCTTCCTTTCAAAAGTGAGCAGGTTCTTCTCGGTATGGACTaGGGCTACTGGCAAGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: QSQGDRSKNTLPFKSEQVLLGMD*GYWQEL Trigger: AAGTTCTTGCCAGTAGCCTCAGTCCATACCGAGAAG...AACCTGCTCACTTTTGAAAGGAAGGGTATTTTTGGAACGATCACCTTGAGACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR TCA 90 bp | AGAACTTACGATAGCCATACAGAGAAACTTCTGAAAGAACCCCATGCCATTGTTGAGTCATTTCTGATGTaGCAGCTTCGTGGTTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RTYDSHTEKLLKEPHAIVESFLM*QLRGSP Trigger: GGGGGAACCACGAAGCTGTCACATCAGAAATGACTC...AACAATGGCATGGGGTTCTTTCAGAAGTTTCTCTGTATGGCTATCGTAAGTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR TCA 90 bp | GGTGATCGTTCCAAAAATACCCTTCCTTTCAAAAGTGAGCAGGTTATCCCAGGGGTTCTGAGTCATTTCTaGTGTGACAGCTTCGTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GDRSKNTLPFKSEQVIPGVLSHF*CDSFVV Trigger: AACCACGAAGCTGTCACATCAGAAATGACTCAGAAC...CCCTGGGATAACCTGCTCACTTTTGAAAGGAAGGGTATTTTTGGAACGATCACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR GCA 90 bp | ATTAGAACATACCCAGTGTCACCTCCTGGTGTTAATGTGACAGGGAGAGGTTACATGGCAGAGAATCTATaGCTCCATTTTCCTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: IRTYPVSPPGVNVTGRGYMAENL*LHFPPH Trigger: GTGTGGAGGAAAATGGAGGCATAGATTCTCTGCCAT...GTAACCTCTCCCTGTCACATTAACACCAGGAGGTGACACTGGGTATGTTCTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134710.3 |
||
| CDS-3UTR GCA 90 bp | GGTGATCGTTCCAAAAATACCCTTCCTTTCAAAAGTGAGCAGGTTATCCCAGGGCTTTTCTGTCCCTTGTaGTGTGACTTTGACTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: GDRSKNTLPFKSEQVIPGLFCPL*CDFDSW Trigger: CCATGAGTCAAAGTCACAGCACAAGGGACAGAAAAG...CCCTGGGATAACCTGCTCACTTTTGAAAGGAAGGGTATTTTTGGAACGATCACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000126214.8 ENSMUST00000232648.2 |
||
| CDS-3UTR CCA 90 bp | CAGTCTCAAGGTGATCGTTCCAAAAATACCCTTCCTTTCAAAAGTGAGCAGGTTCAGGACATTACAGAGTaGCAGGAATCTTCCCGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QSQGDRSKNTLPFKSEQVQDITE*QESSRQ Trigger: TTGCCGGGAAGATTCCTGCCACTCTGTAATGTCCTG...AACCTGCTCACTTTTGAAAGGAAGGGTATTTTTGGAACGATCACCTTGAGACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR CCA 90 bp | TTTCAGGTAGACACAGTTGTCCTTCAAGGAATGACTCTTCTACATCTGGTGTTGCTGCCCTTCTTATGGTaGAAGCTGATAGAGGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FQVDTVVLQGMTLLHLVLLPFLW*KLIEGA Trigger: TGCTCCCTCTATCAGCTTCCACCATAAGAAGGGCAG...CAACACCAGATGTAGAAGAGTCATTCCTTGAAGGACAACTGTGTCTACCTGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR CCA 90 bp | ATACCCTTCCTTTCAAAAGTGAGCAGGTTATCCCAGGGTTTCTTCTTGAATGTTAAGGGGTCTGAGCTGTaGTCAGGTCAGCAGAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: IPFLSKVSRLSQGFFLNVKGSEL*SGQQKA Trigger: TGCTTTCTGCTGACCTGACCACAGCTCAGACCCCTT...AACATTCAAGAAGAAACCCTGGGATAACCTGCTCACTTTTGAAAGGAAGGGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR CCA 90 bp | TTTCAGGTAGACACAGTTGTCCTTCAAGGAATGACTCTTCTACATCTGGTGTTGTCTTCCTTCTCGGTATaGACTGAGGCTACTGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: FQVDTVVLQGMTLLHLVLSSFSV*TEATGK Trigger: CTTGCCAGTAGCCTCAGTCCATACCGAGAAGGAAGA...CAACACCAGATGTAGAAGAGTCATTCCTTGAAGGACAACTGTGTCTACCTGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR CCA 90 bp | AGAACTTACGATAGCCATACAGAGAAACTTCTGAAAGAACCCCATGCCATTGTTGCTTTCTCAAGCTGCTaGCTTCCACATGCCCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: RTYDSHTEKLLKEPHAIVAFSSC*LPHAHP Trigger: AGGATGGGCATGTGGAAGCCAGCAGCTTGAGAAAGC...AACAATGGCATGGGGTTCTTTCAGAAGTTTCTCTGTATGGCTATCGTAAGTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR CCA 90 bp | TTGGGAACGCTAAGCAGCAAGCTGCAGTGCCTTTTCCTCTTTAGCAGAATTATGGCTAAGACACAGACCTaGGAGTTGGCAGATATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LGTLSSKLQCLFLFSRIMAKTQT*ELADIL Trigger: AAGAATATCTGCCAACTCCCAGGTCTGTGTCTTAGC...CATAATTCTGCTAAAGAGGAAAAGGCACTGCAGCTTGCTGCTTAGCGTTCCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| 3UTR CAA 72 bp | CACACACACACACACACACACAAAACACAAGAGAGCTaGCGTGATGTACATGTCTTCGCTAGCCAAATCAAC | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHKTQES*RDVHVFASQIN Trigger: GTTGATTTGGCTAGCGAAGACATGTACATCACGCAAGCTCTCTTGTGTTTTGTGTGTGTGTGTGTGTGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126214.8 ENSMUST00000232648.2 |
||
| CDS-3UTR TCA 90 bp | CAGACCTACAAAATCATACAGGGTTTCTATAAGAATATTGGGCTACAATACACTCTGGATCCACTGGGCTaGGAAGAACGGCTGTACAGG | + |
|
Preference number: 4 (lower is better) Translates to: QTYKIIQGFYKNIGLQYTLDPLG*EERLYR Trigger: CCTGTACAGCCGTTCTTCTCAGCCCAGTGGATCCAG...AGTGTATTGTAGCCCAATATTCTTATAGAAACCCTGTATGATTTTGTAGGTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067307.11 |
||
| CDS-3UTR TCA 90 bp | TTCGATCAGACCTACAAAATCATACAGGGTTTCTATAAGAATATTGGGCTACAAAGGGCTGATGGGAAGTaGGGTGGTACTGCTGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FDQTYKIIQGFYKNIGLQRADGK*GGTAGR Trigger: CCTTCCAGCAGTACCACCTCACTTCCCATCAGCCCT...TTGTAGCCCAATATTCTTATAGAAACCCTGTATGATTTTGTAGGTCTGATCGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067307.11 |
||
| CDS-3UTR TCA 90 bp | TGTCTTTGGATATGTACCGCCTTGGAGAAATGTATAAAACTGTTTAATATGTGGAGGGCTGATGGGAAGTaGGGTGGTACTGCTGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: CLWICTALEKCIKLFNMWRADGK*GGTAGR Trigger: CCTTCCAGCAGTACCACCTCACTTCCCATCAGCCCT...CCACATATTAAACAGTTTTATACATTTCTCCAAGGCGGTACATATCCAAAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR TCA 90 bp | TTGGGAACGCTAAGCAGCAAGCTGCAGTGCCTTTTCCTCTTTAGCAGAATTATGGTTGTCCTTGAGTTCTaGGTCATTTCTGATGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: LGTLSSKLQCLFLFSRIMVVLEF*VISDVT Trigger: TGTCACATCAGAAATGACTCAGAACTCAAGGACAAC...CATAATTCTGCTAAAGAGGAAAAGGCACTGCAGCTTGCTGCTTAGCGTTCCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR GCA 90 bp | CAGACCTACAAAATCATACAGGGTTTCTATAAGAATATTGGGCTACAATACACTCTGCTGGGGCCAATCTaGAGAGGGACTGTTGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QTYKIIQGFYKNIGLQYTLLGPI*RGTVGH Trigger: ATGCCCAACAGTCCCTCTGCAGATTGGCCCCAGCAG...AGTGTATTGTAGCCCAATATTCTTATAGAAACCCTGTATGATTTTGTAGGTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067307.11 |
||
| CDS-3UTR GCA 90 bp | CAGTCTCAAGGTGATCGTTCCAAAAATACCCTTCCTTTCAAAAGTGAGCAGGTTCACCTTTTCCAGCTCTaGCTGAAGCTGAGAAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: QSQGDRSKNTLPFKSEQVHLFQL*LKLRNE Trigger: CTCATTTCTCAGCTTCAGGCAGAGCTGGAAAAGGTG...AACCTGCTCACTTTTGAAAGGAAGGGTATTTTTGGAACGATCACCTTGAGACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR GCA 90 bp | AACACAGATGAAAATACTGATACAGAACAGTCTCAAGGTGATCGTTCCAAAAATCACGGAAGATGCTCCTaGGTTTTCCCGTGCTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: NTDENTDTEQSQGDRSKNHGRCS*VFPCSL Trigger: CAGGGAGCACGGGAAAACGCAGGAGCATCTTCCGTG...ATTTTTGGAACGATCACCTTGAGACTGTTCTGTATCAGTATTTTCATCTGTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR GCA 90 bp | TTGGGAACGCTAAGCAGCAAGCTGCAGTGCCTTTTCCTCTTTAGCAGAATTATGTTAGTTTCTGCATATTaGTGTGACTGGGTTGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LGTLSSKLQCLFLFSRIMLVSAY*CDWVEH Trigger: GTGCTCAACCCAGTCACAGCAATATGCAGAAACTAA...CATAATTCTGCTAAAGAGGAAAAGGCACTGCAGCTTGCTGCTTAGCGTTCCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR GCA 90 bp | CAGTCTCAAGGTGATCGTTCCAAAAATACCCTTCCTTTCAAAAGTGAGCAGGTTAAAGCGTTCAGCCAATaGCTTGTGCTGGTCATAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QSQGDRSKNTLPFKSEQVKAFSQ*LVLVIG Trigger: TCCTATGACCAGCACAAGGCATTGGCTGAACGCTTT...AACCTGCTCACTTTTGAAAGGAAGGGTATTTTTGGAACGATCACCTTGAGACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| 3UTR CAA 72 bp | TGCTGGCCCAGAGTCTGGAACTCTGTTGTATGTAAATaGTGGTGGAGAAAAACATTCTTCCTGCTGTATGTG | + |
|
Preference number: 4 (lower is better) Translates to: CWPRVWNSVVCK*WWRKTFFLLYV Trigger: CACATACAGCAGGAAGAATGTTTTTCTCCACCACAATTTACATACAACAGAGTTCCAGACTCTGGGCCAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232648.2 |
||
| CDS-3UTR TCA 90 bp | CAGACCTACAAAATCATACAGGGTTTCTATAAGAATATTGGGCTACAATACACTCTTCAGTCAGAGGGCTaGTGGGAAGTGAGGTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: QTYKIIQGFYKNIGLQYTLQSEG*WEVRWY Trigger: GTACCACCTCACTTCCCATCAGCCCTCTGACTGAAG...AGTGTATTGTAGCCCAATATTCTTATAGAAACCCTGTATGATTTTGTAGGTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067307.11 |
||
| CDS-3UTR TCA 90 bp | ATACCCTTCCTTTCAAAAGTGAGCAGGTTATCCCAGGGTTTCTTCTTGAATGTTGTCTTCCCCTGGTTTTaGCGTGTTCCTCCAAACTTA | + |
|
Preference number: 4 (lower is better) Translates to: IPFLSKVSRLSQGFFLNVVFPWF*RVPPNL Trigger: TAAGTTTGGAGGAACACGTCAAAACCAGGGGAAGAC...AACATTCAAGAAGAAACCCTGGGATAACCTGCTCACTTTTGAAAGGAAGGGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR TCA 90 bp | TTTCAGGTAGACACAGTTGTCCTTCAAGGAATGACTCTTCTACATCTGGTGTTGGACTTTGTTCTTCTGTaGATCCAGAATCGTCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FQVDTVVLQGMTLLHLVLDFVLL*IQNRPL Trigger: AAGGGGACGATTCTGGATTCACAGAAGAACAAAGTC...CAACACCAGATGTAGAAGAGTCATTCCTTGAAGGACAACTGTGTCTACCTGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR GCA 90 bp | TTCGATCAGACCTACAAAATCATACAGGGTTTCTATAAGAATATTGGGCTACAATTTTCCTCCACACCCTaGTGGGGCCAATCTGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FDQTYKIIQGFYKNIGLQFSSTP*WGQSAE Trigger: CTCTGCAGATTGGCCCCAGCAGGGTGTGGAGGAAAA...TTGTAGCCCAATATTCTTATAGAAACCCTGTATGATTTTGTAGGTCTGATCGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000067307.11 |
||
| CDS-3UTR GCA 90 bp | TGTCTTTGGATATGTACCGCCTTGGAGAAATGTATAAAACTGTTTAATATGTGGGCACACCAGCGGTGTTaGTGGAGGAAGGTGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CLWICTALEKCIKLFNMWAHQRC*WRKVKK Trigger: CTTCTTCACCTTCCTCCAGCAACACCGCTGGTGTGC...CCACATATTAAACAGTTTTATACATTTCTCCAAGGCGGTACATATCCAAAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR CCA 90 bp | CAGTCTCAAGGTGATCGTTCCAAAAATACCCTTCCTTTCAAAAGTGAGCAGGTTGGGAAAGGTTCTGTTTaGAAGGCTCAGGACATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: QSQGDRSKNTLPFKSEQVGKGSV*KAQDIL Trigger: CAAAATGTCCTGAGCCTTCCAAACAGAACCTTTCCC...AACCTGCTCACTTTTGAAAGGAAGGGTATTTTTGGAACGATCACCTTGAGACTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR CCA 90 bp | TTCGATCAGACCTACAAAATCATACAGGGTTTCTATAAGAATATTGGGCTACAAACTGCCGTGCACTCCTaGAGCATCAGTCTGAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: FDQTYKIIQGFYKNIGLQTAVHS*SISLNG Trigger: GCCATTCAGACTGATGCTCCAGGAGTGCACGGCAGT...TTGTAGCCCAATATTCTTATAGAAACCCTGTATGATTTTGTAGGTCTGATCGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067307.11 |
||
| CDS-3UTR CCA 90 bp | TGTCTTTGGATATGTACCGCCTTGGAGAAATGTATAAAACTGTTTAATATGTGGACTGCCGTGCACTCCTaGAGCATCAGTCTGAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: CLWICTALEKCIKLFNMWTAVHS*SISLNG Trigger: GCCATTCAGACTGATGCTCCAGGAGTGCACGGCAGT...CCACATATTAAACAGTTTTATACATTTCTCCAAGGCGGTACATATCCAAAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
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| CDS-3UTR CCA 90 bp | ATACCCTTCCTTTCAAAAGTGAGCAGGTTATCCCAGGGTTTCTTCTTGAATGTTACTTTTCCTGAATATTaGCAACCGGGAGACCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: IPFLSKVSRLSQGFFLNVTFPEY*QPGDQG Trigger: ACCCTGGTCTCCCGGTTGCCAATATTCAGGAAAAGT...AACATTCAAGAAGAAACCCTGGGATAACCTGCTCACTTTTGAAAGGAAGGGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR CCA 90 bp | CAGTCTCAAGGTGATCGTTCCAAAAATACCCTTCCTTTCAAAAGTGAGCAGGTTTACTGGCAAGAACTTTaGCAGCACTCGCTTCATATC | + |
|
Preference number: 4 (lower is better) Translates to: QSQGDRSKNTLPFKSEQVYWQEL*QHSLHI Trigger: GATATGAAGCGAGTGCTGCCAAAGTTCTTGCCAGTA...AACCTGCTCACTTTTGAAAGGAAGGGTATTTTTGGAACGATCACCTTGAGACTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR TCA 90 bp | ATACCCTTCCTTTCAAAAGTGAGCAGGTTATCCCAGGGTTTCTTCTTGAATGTTCTCTTGTTATATCCTTaGAAGGCAGTGGCTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: IPFLSKVSRLSQGFFLNVLLLYP*KAVALQ Trigger: CTGAAGAGCCACTGCCTTTCAAGGATATAACAAGAG...AACATTCAAGAAGAAACCCTGGGATAACCTGCTCACTTTTGAAAGGAAGGGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR TCA 90 bp | TTTCAGGTAGACACAGTTGTCCTTCAAGGAATGACTCTTCTACATCTGGTGTTGAAAATTGTCACAGTGTaGTGCCGTGCTTCCACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FQVDTVVLQGMTLLHLVLKIVTV*CRASTF Trigger: AAAAGTGGAAGCACGGCATCACACTGTGACAATTTT...CAACACCAGATGTAGAAGAGTCATTCCTTGAAGGACAACTGTGTCTACCTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR TCA 90 bp | CAGTCTCAAGGTGATCGTTCCAAAAATACCCTTCCTTTCAAAAGTGAGCAGGTTTTCCATCTTTGTCTTTaGGACAGCAGTAAGACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QSQGDRSKNTLPFKSEQVFHLCL*DSSKTG Trigger: TCCAGTCTTACTGCTGTCTCAAAGACAAAGATGGAA...AACCTGCTCACTTTTGAAAGGAAGGGTATTTTTGGAACGATCACCTTGAGACTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
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| CDS-3UTR GCA 90 bp | AGAACTTACGATAGCCATACAGAGAAACTTCTGAAAGAACCCCATGCCATTGTTCGTCCCCTTCACTTCTaGCAGAACTTAGACAGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: RTYDSHTEKLLKEPHAIVRPLHF*QNLDSL Trigger: TAAACTGTCTAAGTTCTGGCAGAAGTGAAGGGGACG...AACAATGGCATGGGGTTCTTTCAGAAGTTTCTCTGTATGGCTATCGTAAGTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR GCA 90 bp | ATACCCTTCCTTTCAAAAGTGAGCAGGTTATCCCAGGGTTTCTTCTTGAATGTTTGTAGTATAATTGCCTaGGGGAAGGTACAGGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: IPFLSKVSRLSQGFFLNVCSIIA*GKVQGH Trigger: ATGTCCCTGTACCTTCCCGCAGGCAATTATACTACA...AACATTCAAGAAGAAACCCTGGGATAACCTGCTCACTTTTGAAAGGAAGGGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232648.2 |
||
| CDS-3UTR CCA 90 bp | CAGACCTACAAAATCATACAGGGTTTCTATAAGAATATTGGGCTACAATACACTGTGAGGTGGTACTGCTaGAAGGGCTCACATCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: QTYKIIQGFYKNIGLQYTVRWYC*KGSHHS Trigger: AGAGTGATGTGAGCCCTTCCAGCAGTACCACCTCAC...AGTGTATTGTAGCCCAATATTCTTATAGAAACCCTGTATGATTTTGTAGGTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067307.11 |
||
| CDS-3UTR CCA 90 bp | GTAGTTACTAGACCTGAACTTTCTCTAAGGAAACAGTCAGTTGATACTCTTATTGTGAGGTGGTACTGCTaGAAGGGCTCACATCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: VVTRPELSLRKQSVDTLIVRWYC*KGSHHS Trigger: AGAGTGATGTGAGCCCTTCCAGCAGTACCACCTCAC...AATAAGAGTATCAACTGACTGTTTCCTTAGAGAAAGTTCAGGTCTAGTAACTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR CCA 90 bp | ATACCCTTCCTTTCAAAAGTGAGCAGGTTATCCCAGGGTTTCTTCTTGAATGTTGCATATTGCTGTGACTaGGTTGAGCACCATTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: IPFLSKVSRLSQGFFLNVAYCCD*VEHHWK Trigger: TTTCCAATGGTGCTCAACCCAGTCACAGCAATATGC...AACATTCAAGAAGAAACCCTGGGATAACCTGCTCACTTTTGAAAGGAAGGGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR CCA 90 bp | GTAGTTACTAGACCTGAACTTTCTCTAAGGAAACAGTCAGTTGATACTCTTATTGATAGGTCCTCTGGGTaGCTGTCCAAATCTGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VVTRPELSLRKQSVDTLIDRSSG*LSKSAC Trigger: ACAGGCAGATTTGGACAGCCACCCAGAGGACCTATC...AATAAGAGTATCAACTGACTGTTTCCTTAGAGAAAGTTCAGGTCTAGTAACTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
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| CDS-3UTR TCA 90 bp | TTCGATCAGACCTACAAAATCATACAGGGTTTCTATAAGAATATTGGGCTACAACCTGGAGCATCAGTCTaGATGGCAGAGAATCTATGC | + |
|
Preference number: 4 (lower is better) Translates to: FDQTYKIIQGFYKNIGLQPGASV*MAENLC Trigger: GCATAGATTCTCTGCCATTCAGACTGATGCTCCAGG...TTGTAGCCCAATATTCTTATAGAAACCCTGTATGATTTTGTAGGTCTGATCGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067307.11 |
||
| CDS-3UTR TCA 90 bp | CAGACCTACAAAATCATACAGGGTTTCTATAAGAATATTGGGCTACAATACACTCCTGAAGCTGAGAAATaGGCTCATCCCTGTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QTYKIIQGFYKNIGLQYTPEAEK*AHPCPS Trigger: TGAAGGACAGGGATGAGCTCATTTCTCAGCTTCAGG...AGTGTATTGTAGCCCAATATTCTTATAGAAACCCTGTATGATTTTGTAGGTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067307.11 |
||
| CDS-3UTR GCA 90 bp | TTCGATCAGACCTACAAAATCATACAGGGTTTCTATAAGAATATTGGGCTACAAGCCTTCTGTAAATGCTaGACCTTTTCCAGCTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: FDQTYKIIQGFYKNIGLQAFCKC*TFSSSA Trigger: GGCAGAGCTGGAAAAGGTGCAGCATTTACAGAAGGC...TTGTAGCCCAATATTCTTATAGAAACCCTGTATGATTTTGTAGGTCTGATCGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067307.11 |
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| CDS-3UTR GCA 90 bp | TTTCAGGTAGACACAGTTGTCCTTCAAGGAATGACTCTTCTACATCTGGTGTTGCCTAGAAGTTCAGTCTaGGTGGATTTATCTACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FQVDTVVLQGMTLLHLVLPRSSV*VDLSTL Trigger: AAGAGTAGATAAATCCACGCAGACTGAACTTCTAGG...CAACACCAGATGTAGAAGAGTCATTCCTTGAAGGACAACTGTGTCTACCTGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR GCA 90 bp | TTTCAGGTAGACACAGTTGTCCTTCAAGGAATGACTCTTCTACATCTGGTGTTGTTTAGGAAAGGCATCTaGCTCAGACAAAGAATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FQVDTVVLQGMTLLHLVLFRKGI*LRQRIF Trigger: GAAGATTCTTTGTCTGAGGCAGATGCCTTTCCTAAA...CAACACCAGATGTAGAAGAGTCATTCCTTGAAGGACAACTGTGTCTACCTGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
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| CDS-3UTR CCA 90 bp | CAGACCTACAAAATCATACAGGGTTTCTATAAGAATATTGGGCTACAATACACTCAGGACATTACAGAGTaGCAGGAATCTTCCCGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QTYKIIQGFYKNIGLQYTQDITE*QESSRQ Trigger: TTGCCGGGAAGATTCCTGCCACTCTGTAATGTCCTG...AGTGTATTGTAGCCCAATATTCTTATAGAAACCCTGTATGATTTTGTAGGTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067307.11 |
||
| CDS-3UTR CCA 90 bp | TTCGATCAGACCTACAAAATCATACAGGGTTTCTATAAGAATATTGGGCTACAAATCCTTGAAAGGCAGTaGCTCTTCAGTCAGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FDQTYKIIQGFYKNIGLQILERQ*LFSQRA Trigger: AGCCCTCTGACTGAAGAGCCACTGCCTTTCAAGGAT...TTGTAGCCCAATATTCTTATAGAAACCCTGTATGATTTTGTAGGTCTGATCGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067307.11 |
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| CDS-3UTR CCA 90 bp | AACACAGATGAAAATACTGATACAGAACAGTCTCAAGGTGATCGTTCCAAAAATATCCTTGAAAGGCAGTaGCTCTTCAGTCAGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NTDENTDTEQSQGDRSKNILERQ*LFSQRA Trigger: AGCCCTCTGACTGAAGAGCCACTGCCTTTCAAGGAT...ATTTTTGGAACGATCACCTTGAGACTGTTCTGTATCAGTATTTTCATCTGTGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
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| CDS-3UTR CCA 90 bp | CAGTCTCAAGGTGATCGTTCCAAAAATACCCTTCCTTTCAAAAGTGAGCAGGTTGAAGTTCAGTCTGCGTaGATTTATCTACTCTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QSQGDRSKNTLPFKSEQVEVQSA*IYLLLK Trigger: CTTCAAGAGTAGATAAATCCACGCAGACTGAACTTC...AACCTGCTCACTTTTGAAAGGAAGGGTATTTTTGGAACGATCACCTTGAGACTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
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| CDS-3UTR CCA 90 bp | TGTCTTTGGATATGTACCGCCTTGGAGAAATGTATAAAACTGTTTAATATGTGGCCAGACTGTTCATTTTaGAAGAGGAGGACCCCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CLWICTALEKCIKLFNMWPDCSF*KRRTPF Trigger: GAACGGGGTCCTCCTCTTCCAAAATGAACAGTCTGG...CCACATATTAAACAGTTTTATACATTTCTCCAAGGCGGTACATATCCAAAGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
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| CDS-3UTR TCA 90 bp | TTCGATCAGACCTACAAAATCATACAGGGTTTCTATAAGAATATTGGGCTACAACGGCAAACTGGGGGTTaGAGATTCTGTTCCTCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: FDQTYKIIQGFYKNIGLQRQTGG*RFCSSK Trigger: TTTAGAGGAACAGAATCTTCAACCCCCAGTTTGCCG...TTGTAGCCCAATATTCTTATAGAAACCCTGTATGATTTTGTAGGTCTGATCGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067307.11 |
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| CDS-3UTR GCA 90 bp | CAGACCTACAAAATCATACAGGGTTTCTATAAGAATATTGGGCTACAATACACTCACCTTTTCCAGCTCTaGCTGAAGCTGAGAAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: QTYKIIQGFYKNIGLQYTHLFQL*LKLRNE Trigger: CTCATTTCTCAGCTTCAGGCAGAGCTGGAAAAGGTG...AGTGTATTGTAGCCCAATATTCTTATAGAAACCCTGTATGATTTTGTAGGTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067307.11 |
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| CDS-3UTR CCA 90 bp | TTCGATCAGACCTACAAAATCATACAGGGTTTCTATAAGAATATTGGGCTACAAGAGCATCAGTCTGAATaGCAGAGAATCTATGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FDQTYKIIQGFYKNIGLQEHQSE*QRIYAS Trigger: GGAGGCATAGATTCTCTGCCATTCAGACTGATGCTC...TTGTAGCCCAATATTCTTATAGAAACCCTGTATGATTTTGTAGGTCTGATCGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067307.11 |
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| CDS-3UTR TCA 90 bp | TTCGATCAGACCTACAAAATCATACAGGGTTTCTATAAGAATATTGGGCTACAACTCTTGTTATATCCTTaGAAGGCAGTGGCTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FDQTYKIIQGFYKNIGLQLLLYP*KAVALQ Trigger: CTGAAGAGCCACTGCCTTTCAAGGATATAACAAGAG...TTGTAGCCCAATATTCTTATAGAAACCCTGTATGATTTTGTAGGTCTGATCGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067307.11 |
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| CDS-3UTR TCA 90 bp | TGTCTTTGGATATGTACCGCCTTGGAGAAATGTATAAAACTGTTTAATATGTGGTCACAGGATCCCAGATaGTTTAAAACGTCCAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: CLWICTALEKCIKLFNMWSQDPR*FKTSRL Trigger: CAGTCTGGACGTTTTAAATCATCTGGGATCCTGTGA...CCACATATTAAACAGTTTTATACATTTCTCCAAGGCGGTACATATCCAAAGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
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| CDS-3UTR GCA 90 bp | TTCGATCAGACCTACAAAATCATACAGGGTTTCTATAAGAATATTGGGCTACAAATGGCAGAGAATCTATaGCTCCATTTTCCTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: FDQTYKIIQGFYKNIGLQMAENL*LHFPPH Trigger: GTGTGGAGGAAAATGGAGGCATAGATTCTCTGCCAT...TTGTAGCCCAATATTCTTATAGAAACCCTGTATGATTTTGTAGGTCTGATCGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067307.11 |
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| CDS-3UTR GCA 90 bp | GTAGTTACTAGACCTGAACTTTCTCTAAGGAAACAGTCAGTTGATACTCTTATTATGGCAGAGAATCTATaGCTCCATTTTCCTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: VVTRPELSLRKQSVDTLIMAENL*LHFPPH Trigger: GTGTGGAGGAAAATGGAGGCATAGATTCTCTGCCAT...AATAAGAGTATCAACTGACTGTTTCCTTAGAGAAAGTTCAGGTCTAGTAACTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
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| CDS-3UTR GCA 90 bp | CAGACCTACAAAATCATACAGGGTTTCTATAAGAATATTGGGCTACAATACACTCTCACATCACTCTCTTaGAGCACTCTCTTCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QTYKIIQGFYKNIGLQYTLTSLS*STLFIF Trigger: GAAGATGAAGAGAGTGCTGCAAGAGAGTGATGTGAG...AGTGTATTGTAGCCCAATATTCTTATAGAAACCCTGTATGATTTTGTAGGTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067307.11 |
||
| CDS-3UTR GCA 90 bp | AACACAGATGAAAATACTGATACAGAACAGTCTCAAGGTGATCGTTCCAAAAATCTCACATCACTCTCTTaGAGCACTCTCTTCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NTDENTDTEQSQGDRSKNLTSLS*STLFIF Trigger: GAAGATGAAGAGAGTGCTGCAAGAGAGTGATGTGAG...ATTTTTGGAACGATCACCTTGAGACTGTTCTGTATCAGTATTTTCATCTGTGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR GCA 90 bp | TCTTATACCACATACATTCAACAAGCTTCCTTCACCATGAGACCAATAGCTAAGCCTAGAAGTTCAGTCTaGGTGGATTTATCTACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SYTTYIQQASFTMRPIAKPRSSV*VDLSTL Trigger: AAGAGTAGATAAATCCACGCAGACTGAACTTCTAGG...CTTAGCTATTGGTCTCATGGTGAAGGAAGCTTGTTGAATGTATGTGGTATAAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134710.3 |
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| CDS-3UTR GCA 90 bp | GTAGTTACTAGACCTGAACTTTCTCTAAGGAAACAGTCAGTTGATACTCTTATTCTTTTCTGTCCCTTGTaGTGTGACTTTGACTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: VVTRPELSLRKQSVDTLILFCPL*CDFDSW Trigger: CCATGAGTCAAAGTCACAGCACAAGGGACAGAAAAG...AATAAGAGTATCAACTGACTGTTTCCTTAGAGAAAGTTCAGGTCTAGTAACTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126214.8 ENSMUST00000232648.2 |
||
| CDS-3UTR CCA 90 bp | TTCGATCAGACCTACAAAATCATACAGGGTTTCTATAAGAATATTGGGCTACAAGGGAAAGGTTCTGTTTaGAAGGCTCAGGACATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: FDQTYKIIQGFYKNIGLQGKGSV*KAQDIL Trigger: CAAAATGTCCTGAGCCTTCCAAACAGAACCTTTCCC...TTGTAGCCCAATATTCTTATAGAAACCCTGTATGATTTTGTAGGTCTGATCGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067307.11 |
||
| CDS-3UTR TCA 90 bp | CAGACCTACAAAATCATACAGGGTTTCTATAAGAATATTGGGCTACAATACACTACGCTCCAAGATGTTTaGGATTTGTATCGCATCCTA | + |
|
Preference number: 4 (lower is better) Translates to: QTYKIIQGFYKNIGLQYTTLQDV*DLYRIL Trigger: TAGGATGCGATACAAATCTCAAACATCTTGGAGCGT...AGTGTATTGTAGCCCAATATTCTTATAGAAACCCTGTATGATTTTGTAGGTCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067307.11 |
||
| CDS-3UTR GCA 90 bp | GTAGTTACTAGACCTGAACTTTCTCTAAGGAAACAGTCAGTTGATACTCTTATTGAAATACTAAGGTTCTaGTCAGTGGGTTCTGGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: VVTRPELSLRKQSVDTLIEILRF*SVGSGL Trigger: TAAGCCAGAACCCACTGAGCAGAACCTTAGTATTTC...AATAAGAGTATCAACTGACTGTTTCCTTAGAGAAAGTTCAGGTCTAGTAACTAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR CCA 90 bp | TTCGATCAGACCTACAAAATCATACAGGGTTTCTATAAGAATATTGGGCTACAATATGCCATTGATGCCTaGAATTATCCTTCTGAACGC | + |
|
Preference number: 4 (lower is better) Translates to: FDQTYKIIQGFYKNIGLQYAIDA*NYPSER Trigger: GCGTTCAGAAGGATAATTCCAGGCATCAATGGCATA...TTGTAGCCCAATATTCTTATAGAAACCCTGTATGATTTTGTAGGTCTGATCGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067307.11 |
||
| CDS-3UTR CCA 90 bp | TGTCTTTGGATATGTACCGCCTTGGAGAAATGTATAAAACTGTTTAATATGTGGGAGGTAGCATCATTGTaGCCAAAATTGTCACAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: CLWICTALEKCIKLFNMWEVASL*PKLSQC Trigger: ACACTGTGACAATTTTGGCCACAATGATGCTACCTC...CCACATATTAAACAGTTTTATACATTTCTCCAAGGCGGTACATATCCAAAGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR GCA 90 bp | TTCGATCAGACCTACAAAATCATACAGGGTTTCTATAAGAATATTGGGCTACAACCTAGAAGTTCAGTCTaGGTGGATTTATCTACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FDQTYKIIQGFYKNIGLQPRSSV*VDLSTL Trigger: AAGAGTAGATAAATCCACGCAGACTGAACTTCTAGG...TTGTAGCCCAATATTCTTATAGAAACCCTGTATGATTTTGTAGGTCTGATCGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067307.11 |
||
| CDS-3UTR CCA 90 bp | TTCGATCAGACCTACAAAATCATACAGGGTTTCTATAAGAATATTGGGCTACAAGAAGTTCAGTCTGCGTaGATTTATCTACTCTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FDQTYKIIQGFYKNIGLQEVQSA*IYLLLK Trigger: CTTCAAGAGTAGATAAATCCACGCAGACTGAACTTC...TTGTAGCCCAATATTCTTATAGAAACCCTGTATGATTTTGTAGGTCTGATCGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067307.11 |
||
| CDS GCA 90 bp | AGCTGCTGGCTTCCACATGCCCATCCTTCGGCTTTAAGACCATTCTaGTGCTCCCCGCTGTCCCTTCAGAGGAGGACCGCAGCCGCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: SCWLPHAHPSALRPF*CSPLSLQRRTAAAA Trigger: AGCGGCGGCTGCGGTCCTCCTCTGAAGGGACAGCGGGGAGCAGCAGAATGGTCTTAAAGCCGAAGGATGGGCATGTGGAAGCCAGCAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045522.13 ENSMUST00000126214.8 |
||
| CDS GCA 90 bp | CCCGTGCTCCCTGAGCTCGAGTTAGTGCTGGAAGGGGAGGAGCTATaGACACCAGCGGTGTTGCTGGAGGAAGGTGAAGAAGGCAGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: PVLPELELVLEGEEL*TPAVLLEEGEEGRE Trigger: TTCTCTGCCTTCTTCACCTTCCTCCAGCAACACCGCTGGTGTGCATAGCTCCTCCCCTTCCAGCACTAACTCGAGCTCAGGGAGCACGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045522.13 ENSMUST00000126214.8 |
||
| CDS GCA 90 bp | AGAATCTATGCCTCCATTTTCCTCCACACCCTGCTGGGGCCAATCTaGAGAGGGACTGTTGGGCATGCAGCTGACATGGGAACACCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RIYASIFLHTLLGPI*RGTVGHAADMGTPG Trigger: GCCCGGTGTTCCCATGTCAGCTGCATGCCCAACAGTCCCTCTGCAGATTGGCCCCAGCAGGGTGTGGAGGAAAATGGAGGCATAGATTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000045522.13 ENSMUST00000067307.11 ENSMUST00000126214.8 ENSMUST00000134710.3 |
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| CDS GCA 90 bp | CCCTCCGGTTACCAGCAGGGGTCTCTGGTGAAGAATGCAGTTCAGTaGTGCACCGACCTTCTAGCCTGTACCTCCCTGGAGACATCACAC | + |
|
Preference number: 5 (lower is better) Translates to: PSGYQQGSLVKNAVQ*CTDLLACTSLETSH Trigger: GTGTGATGTCTCCAGGGAGGTACAGGCTAGAAGGTCGGTGCAGCACTGAACTGCATTCTTCACCAGAGACCCCTGCTGGTAACCGGAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045522.13 ENSMUST00000126214.8 |
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| CDS GCA 90 bp | TCCGGTTACCAGCAGGGGTCTCTGGTGAAGAATGCAGTTCAGTGCTaGACCGACCTTCTAGCCTGTACCTCCCTGGAGACATCACACAGG | + |
|
Preference number: 5 (lower is better) Translates to: SGYQQGSLVKNAVQC*TDLLACTSLETSHR Trigger: CCTGTGTGATGTCTCCAGGGAGGTACAGGCTAGAAGGTCGGTGCAGCACTGAACTGCATTCTTCACCAGAGACCCCTGCTGGTAACCGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045522.13 ENSMUST00000126214.8 |
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| CDS GCA 90 bp | AGTGACACTTCCCTCCGGTTACCAGCAGGGGTCTCTGGTGAAGAATaGAGTTCAGTGCTGCACCGACCTTCTAGCCTGTACCTCCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SDTSLRLPAGVSGEE*SSVLHRPSSLYLPG Trigger: TCCAGGGAGGTACAGGCTAGAAGGTCGGTGCAGCACTGAACTGCATTCTTCACCAGAGACCCCTGCTGGTAACCGGAGGGAAGTGTCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045522.13 ENSMUST00000126214.8 |
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| CDS TCA 90 bp | CACCCTGCTGGGGCCAATCTGCAGAGGGACTGTTGGGCATGCAGCTaGCATGGGAACACCGGGCCTCTTGATCAGTGTCTTTTGTTATTC | + |
|
Preference number: 5 (lower is better) Translates to: HPAGANLQRDCWACS*HGNTGPLDQCLLLF Trigger: GAATAACAAAAGACACTGATCAAGAGGCCCGGTGTTCCCATGTCAGCTGCATGCCCAACAGTCCCTCTGCAGATTGGCCCCAGCAGGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000045522.13 ENSMUST00000067307.11 ENSMUST00000126214.8 ENSMUST00000134710.3 |
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| CDS CCA 90 bp | CTGAATGGCAGAGAATCTATGCCTCCATTTTCCTCCACACCCTGCTaGGGCCAATCTGCAGAGGGACTGTTGGGCATGCAGCTGACATGG | + |
|
Preference number: 5 (lower is better) Translates to: LNGRESMPPFSSTPC*GQSAEGLLGMQLTW Trigger: CCATGTCAGCTGCATGCCCAACAGTCCCTCTGCAGATTGGCCCCAGCAGGGTGTGGAGGAAAATGGAGGCATAGATTCTCTGCCATTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000045522.13 ENSMUST00000067307.11 ENSMUST00000126214.8 ENSMUST00000134710.3 |
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| CDS CCA 90 bp | AAGCAGCGTCTTCACTGCCGTGCACTCCTGGAGCATCAGTCTGAATaGCAGAGAATCTATGCCTCCATTTTCCTCCACACCCTGCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: KQRLHCRALLEHQSE*QRIYASIFLHTLLG Trigger: CCCCAGCAGGGTGTGGAGGAAAATGGAGGCATAGATTCTCTGCCATTCAGACTGATGCTCCAGGAGTGCACGGCAGTGAAGACGCTGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000045522.13 ENSMUST00000067307.11 ENSMUST00000126214.8 ENSMUST00000134710.3 |
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| CDS GCA 90 bp | AGTCTGAATGGCAGAGAATCTATGCCTCCATTTTCCTCCACACCCTaGTGGGGCCAATCTGCAGAGGGACTGTTGGGCATGCAGCTGACA | + |
|
Preference number: 5 (lower is better) Translates to: SLNGRESMPPFSSTP*WGQSAEGLLGMQLT Trigger: TGTCAGCTGCATGCCCAACAGTCCCTCTGCAGATTGGCCCCAGCAGGGTGTGGAGGAAAATGGAGGCATAGATTCTCTGCCATTCAGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000045522.13 ENSMUST00000067307.11 ENSMUST00000126214.8 ENSMUST00000134710.3 |
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| CDS GCA 90 bp | ACATCCACAGAGCAAGATGGGGAAGGTCTCCCTAAGGCGGCTTCCTaGTCTTGGTATTGTGCAATTGCCAGCGAGAACTCAGGCTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: TSTEQDGEGLPKAAS*SWYCAIASENSGCC Trigger: ACAGCAGCCTGAGTTCTCGCTGGCAATTGCACAATACCAAGAGCAGGAAGCCGCCTTAGGGAGACCTTCCCCATCTTGCTCTGTGGATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045522.13 ENSMUST00000126214.8 |
||
| CDS TCA 90 bp | TCAGAAGCAGCGTCTTCACTGCCGTGCACTCCTGGAGCATCAGTCTaGATGGCAGAGAATCTATGCCTCCATTTTCCTCCACACCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SEAASSLPCTPGASV*MAENLCLHFPPHPA Trigger: AGCAGGGTGTGGAGGAAAATGGAGGCATAGATTCTCTGCCATTCAGACTGATGCTCCAGGAGTGCACGGCAGTGAAGACGCTGCTTCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000045522.13 ENSMUST00000067307.11 ENSMUST00000126214.8 ENSMUST00000134710.3 |
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| CDS GCA 90 bp | ATGGGAAGTGAGGTGGTACTGCTGGAAGGGCTCACATCACTCTCTTaGAGCACTCTCTTCATCTTCAGAAGCAGCGTCTTCACTGCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: MGSEVVLLEGLTSLS*STLFIFRSSVFTAV Trigger: CACGGCAGTGAAGACGCTGCTTCTGAAGATGAAGAGAGTGCTGCAAGAGAGTGATGTGAGCCCTTCCAGCAGTACCACCTCACTTCCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045522.13 ENSMUST00000067307.11 ENSMUST00000126214.8 ENSMUST00000134710.3 |
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| CDS CCA 90 bp | TTCTGCTCAGTGGGTTCTGGCTTAGGTTCACTGCCCTTCTTATGGTaGAAGCTGATAGAGGGAGCACGGAAGATGCTCCTGCGTTTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: FCSVGSGLGSLPFLW*KLIEGARKMLLRFP Trigger: GGGAAAACGCAGGAGCATCTTCCGTGCTCCCTCTATCAGCTTCCACCATAAGAAGGGCAGTGAACCTAAGCCAGAACCCACTGAGCAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045522.13 ENSMUST00000126214.8 |
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| CDS CCA 90 bp | AGAGGAGGACCGCAGCCGCCGCTCTATATATCTTCCTTCTCGGTATaGACTGAGGCTACTGGCAAGAACTTTGGCAGCACTCGCTTCATA | + |
|
Preference number: 5 (lower is better) Translates to: RGGPQPPLYISSFSV*TEATGKNFGSTRFI Trigger: TATGAAGCGAGTGCTGCCAAAGTTCTTGCCAGTAGCCTCAGTCCATACCGAGAAGGAAGATATATAGAGCGGCGGCTGCGGTCCTCCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045522.13 ENSMUST00000126214.8 |
||
| CDS TCA 90 bp | AGGACCGCAGCCGCCGCTCTATATATCTTCCTTCTCGGTATGGACTaGGGCTACTGGCAAGAACTTTGGCAGCACTCGCTTCATATCCAT | + |
|
Preference number: 5 (lower is better) Translates to: RTAAAALYIFLLGMD*GYWQELWQHSLHIH Trigger: ATGGATATGAAGCGAGTGCTGCCAAAGTTCTTGCCAGTAGCCTCAGTCCATACCGAGAAGGAAGATATATAGAGCGGCGGCTGCGGTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045522.13 ENSMUST00000126214.8 |
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| CDS CCA 90 bp | AGGTTCTGCTCAGTGGGTTCTGGCTTAGGTTCACTGCCCTTCTTATaGTGGAAGCTGATAGAGGGAGCACGGAAGATGCTCCTGCGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: RFCSVGSGLGSLPFL*WKLIEGARKMLLRF Trigger: AAAACGCAGGAGCATCTTCCGTGCTCCCTCTATCAGCTTCCACCATAAGAAGGGCAGTGAACCTAAGCCAGAACCCACTGAGCAGAACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045522.13 ENSMUST00000126214.8 |
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| CDS-3UTR CAA 90 bp | CTGCGCTCACTTGTTCCATTAGAACATACCCAGTGTCACCTCCTGGTGTTAATGTCTGCAGAGGGACTGTaGGGCATGCAGCTGACATGG | + |
|
Preference number: 5 (lower is better) Translates to: LRSLVPLEHTQCHLLVLMSAEGL*GMQLTW Trigger: CCATGTCAGCTGCATGCCCAACAGTCCCTCTGCAGA...CATTAACACCAGGAGGTGACACTGGGTATGTTCTAATGGAACAAGTGAGCGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134710.3 |
||
| CDS TCA 90 bp | GAGGGACTGTTGGGCATGCAGCTGACATGGGAACACCGGGCCTCTTaGTCAGTGTCTTTTGTTATTCTCAGGGAAAGGTTCTGTTTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: EGLLGMQLTWEHRAS*SVSFVILRERFCLE Trigger: TTCCAAACAGAACCTTTCCCTGAGAATAACAAAAGACACTGATCAAGAGGCCCGGTGTTCCCATGTCAGCTGCATGCCCAACAGTCCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045522.13 ENSMUST00000067307.11 ENSMUST00000126214.8 |
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| CDS GCA 90 bp | ACTCTCTTGCAGCACTCTCTTCATCTTCAGAAGCAGCGTCTTCACTaGCGTGCACTCCTGGAGCATCAGTCTGAATGGCAGAGAATCTAT | + |
|
Preference number: 5 (lower is better) Translates to: TLLQHSLHLQKQRLH*RALLEHQSEWQRIY Trigger: ATAGATTCTCTGCCATTCAGACTGATGCTCCAGGAGTGCACGGCAGTGAAGACGCTGCTTCTGAAGATGAAGAGAGTGCTGCAAGAGAGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045522.13 ENSMUST00000067307.11 ENSMUST00000126214.8 ENSMUST00000134710.3 |
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| CDS CCA 90 bp | GGGTTGAGCACCATTGGAAATACTAAGGTTCTGCTCAGTGGGTTCTaGCTTAGGTTCACTGCCCTTCTTATGGTGGAAGCTGATAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GLSTIGNTKVLLSGF*LRFTALLMVEADRG Trigger: CCCTCTATCAGCTTCCACCATAAGAAGGGCAGTGAACCTAAGCCAGAACCCACTGAGCAGAACCTTAGTATTTCCAATGGTGCTCAACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045522.13 ENSMUST00000126214.8 |
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| CDS TCA 90 bp | GGAAGGGGAGGAGCTATGCACACCAGCGGTGTTGCTGGAGGAAGGTaGAGAAGGCAGAGAATCATGTCTTCTGTTAATACTTTTCCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: GRGGAMHTSGVAGGR*RRQRIMSSVNTFPE Trigger: TTCAGGAAAAGTATTAACAGAAGACATGATTCTCTGCCTTCTTCACCTTCCTCCAGCAACACCGCTGGTGTGCATAGCTCCTCCCCTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045522.13 ENSMUST00000126214.8 |
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| CDS TCA 90 bp | AGTGGGCTGAGAGGTAGCATCATTGTGGCCAAAATTGTCACAGTGTaGTGCCGTGCTTCCACTTTTAGGAAAGGCATCTGCCTCAGACAA | + |
|
Preference number: 5 (lower is better) Translates to: SGLRGSIIVAKIVTV*CRASTFRKGICLRQ Trigger: TTGTCTGAGGCAGATGCCTTTCCTAAAAGTGGAAGCACGGCATCACACTGTGACAATTTTGGCCACAATGATGCTACCTCTCAGCCCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045522.13 ENSMUST00000126214.8 |
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| CDS TCA 90 bp | AGACATCACACAGGGCGCAGTCCCCACAAATTCCATCTTTGTCTTTaGGACAGCAGTAAGACTGGAAGTGGGCTGAGAGGTAGCATCATT | + |
|
Preference number: 5 (lower is better) Translates to: RHHTGRSPHKFHLCL*DSSKTGSGLRGSII Trigger: AATGATGCTACCTCTCAGCCCACTTCCAGTCTTACTGCTGTCTCAAAGACAAAGATGGAATTTGTGGGGACTGCGCCCTGTGTGATGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045522.13 ENSMUST00000126214.8 |
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| CDS GCA 90 bp | GTGACTTTGACTCATGGTTCGATTTCGGTGTGTAGTATAATTGCCTaGGGGAAGGTACAGGGACATTTCCATAAGCTGTGCCCTCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VTLTHGSISVCSIIA*GKVQGHFHKLCPLS Trigger: GGAGAGAGGGCACAGCTTATGGAAATGTCCCTGTACCTTCCCGCAGGCAATTATACTACACACCGAAATCGAACCATGAGTCAAAGTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232648.2 |
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| CDS TCA 90 bp | TCAGACAAAGAATCTTCAGTCAAGGCCAAAAATTCTGAAGGGGTCTaGGCTGTGGTCAGGTCAGCAGAAAGCAGAGGCGACTGTAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SDKESSVKAKNSEGV*AVVRSAESRGDCKE Trigger: TTCCTTACAGTCGCCTCTGCTTTCTGCTGACCTGACCACAGCTCAGACCCCTTCAGAATTTTTGGCCTTGACTGAAGATTCTTTGTCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045522.13 ENSMUST00000126214.8 |
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| CDS-3UTR CAA 90 bp | ATACCCTTCCTTTCAAAAGTGAGCAGGTTATCCCAGGGTTTCTTCTTGAATGTTTCTGCAGAGGGACTGTaGGGCATGCAGCTGACATGG | + |
|
Preference number: 5 (lower is better) Translates to: IPFLSKVSRLSQGFFLNVSAEGL*GMQLTW Trigger: CCATGTCAGCTGCATGCCCAACAGTCCCTCTGCAGA...AACATTCAAGAAGAAACCCTGGGATAACCTGCTCACTTTTGAAAGGAAGGGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
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| CDS-3UTR CAA 90 bp | CTGCGCTCACTTGTTCCATTAGAACATACCCAGTGTCACCTCCTGGTGTTAATGGCTCACATCACTCTCTaGCAGCACTCTCTTCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: LRSLVPLEHTQCHLLVLMAHITL*QHSLHL Trigger: AAGATGAAGAGAGTGCTGCAAGAGAGTGATGTGAGC...CATTAACACCAGGAGGTGACACTGGGTATGTTCTAATGGAACAAGTGAGCGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134710.3 |
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| CDS GCA 90 bp | GTGCATGTAGGATTCCACAGGGCATCGCATCCTAGAAGTTCAGTCTaGGTGGATTTATCTACTCTTGAAGCAAACGCCTTCTGTAAATGC | + |
|
Preference number: 5 (lower is better) Translates to: VHVGFHRASHPRSSV*VDLSTLEANAFCKC Trigger: GCATTTACAGAAGGCGTTTGCTTCAAGAGTAGATAAATCCACGCAGACTGAACTTCTAGGATGCGATGCCCTGTGGAATCCTACATGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134710.3 |
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| CDS-3UTR CAA 90 bp | TTGGGAACGCTAAGCAGCAAGCTGCAGTGCCTTTTCCTCTTTAGCAGAATTATGGGAACACCGGGCCTCTaGATCAGTGTCTTTTGTTAT | + |
|
Preference number: 5 (lower is better) Translates to: LGTLSSKLQCLFLFSRIMGTPGL*ISVFCY Trigger: ATAACAAAAGACACTGATCAAGAGGCCCGGTGTTCC...CATAATTCTGCTAAAGAGGAAAAGGCACTGCAGCTTGCTGCTTAGCGTTCCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
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| CDS-3UTR CAA 90 bp | ATTAGAACATACCCAGTGTCACCTCCTGGTGTTAATGTGACAGGGAGAGGTTACGGAACACCGGGCCTCTaGATCAGTGTCTTTTGTTAT | + |
|
Preference number: 5 (lower is better) Translates to: IRTYPVSPPGVNVTGRGYGTPGL*ISVFCY Trigger: ATAACAAAAGACACTGATCAAGAGGCCCGGTGTTCC...GTAACCTCTCCCTGTCACATTAACACCAGGAGGTGACACTGGGTATGTTCTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134710.3 |
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| CDS-3UTR CAA 90 bp | GGTGATCGTTCCAAAAATACCCTTCCTTTCAAAAGTGAGCAGGTTATCCCAGGGGCTCACATCACTCTCTaGCAGCACTCTCTTCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: GDRSKNTLPFKSEQVIPGAHITL*QHSLHL Trigger: AAGATGAAGAGAGTGCTGCAAGAGAGTGATGTGAGC...CCCTGGGATAACCTGCTCACTTTTGAAAGGAAGGGTATTTTTGGAACGATCACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
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| CDS-3UTR CAA 90 bp | AGAACTTACGATAGCCATACAGAGAAACTTCTGAAAGAACCCCATGCCATTGTTTGCACACCAGCGGTGTaGCTGGAGGAAGGTGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: RTYDSHTEKLLKEPHAIVCTPAV*LEEGEE Trigger: TTCTTCACCTTCCTCCAGCAACACCGCTGGTGTGCA...AACAATGGCATGGGGTTCTTTCAGAAGTTTCTCTGTATGGCTATCGTAAGTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
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| CDS-3UTR CAA 90 bp | GGTGATCGTTCCAAAAATACCCTTCCTTTCAAAAGTGAGCAGGTTATCCCAGGGCCTTGTGCTGTGACTTaGACTCATGGTTCGATTTCG | + |
|
Preference number: 5 (lower is better) Translates to: GDRSKNTLPFKSEQVIPGPCAVT*THGSIS Trigger: CGAAATCGAACCATGAGTCAAAGTCACAGCACAAGG...CCCTGGGATAACCTGCTCACTTTTGAAAGGAAGGGTATTTTTGGAACGATCACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000126214.8 ENSMUST00000232648.2 |
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| CDS TCA 90 bp | AATTCCATCTTTGTCTTTGAGACAGCAGTAAGACTGGAAGTGGGCTaGGAGGTAGCATCATTGTGGCCAAAATTGTCACAGTGTGATGCC | + |
|
Preference number: 5 (lower is better) Translates to: NSIFVFETAVRLEVG*EVASLWPKLSQCDA Trigger: GGCATCACACTGTGACAATTTTGGCCACAATGATGCTACCTCTCAGCCCACTTCCAGTCTTACTGCTGTCTCAAAGACAAAGATGGAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045522.13 ENSMUST00000126214.8 |
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| CDS-3UTR CAA 90 bp | TTTCAGGTAGACACAGTTGTCCTTCAAGGAATGACTCTTCTACATCTGGTGTTGTCCAGACTGTTCATTTaGGAAGAGGAGGACCCCGTT | + |
|
Preference number: 5 (lower is better) Translates to: FQVDTVVLQGMTLLHLVLSRLFI*EEEDPV Trigger: AACGGGGTCCTCCTCTTCCAAAATGAACAGTCTGGA...CAACACCAGATGTAGAAGAGTCATTCCTTGAAGGACAACTGTGTCTACCTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
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| CDS-3UTR CAA 90 bp | TTGGGAACGCTAAGCAGCAAGCTGCAGTGCCTTTTCCTCTTTAGCAGAATTATGTTGCTTTTCTGTCCCTaGTGCTGTGACTTTGACTCA | + |
|
Preference number: 5 (lower is better) Translates to: LGTLSSKLQCLFLFSRIMLLFCP*CCDFDS Trigger: TGAGTCAAAGTCACAGCACAAGGGACAGAAAAGCAA...CATAATTCTGCTAAAGAGGAAAAGGCACTGCAGCTTGCTGCTTAGCGTTCCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000126214.8 ENSMUST00000232648.2 |
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| CDS TCA 90 bp | AGTGGATTGGCTCTGAGGAACCGACTTACAAAACTTATAGTGAGATaGGAAGGACTTGGGGAGCAGCTTCTTGGTGGACTGTTTAATAGA | + |
|
Preference number: 5 (lower is better) Translates to: SGLALRNRLTKLIVR*EGLGEQLLGGLFNR Trigger: TCTATTAAACAGTCCACCAAGAAGCTGCTCCCCAAGTCCTTCTCATCTCACTATAAGTTTTGTAAGTCGGTTCCTCAGAGCCAATCCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045522.13 ENSMUST00000126214.8 |
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| CDS TCA 90 bp | TTGGTATTGTGCAATTGCCAGCGAGAACTCAGGCTGCTGTATCAATaGAGTGGATTGGCTCTGAGGAACCGACTTACAAAACTTATAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LVLCNCQRELRLLYQ*SGLALRNRLTKLIV Trigger: CACTATAAGTTTTGTAAGTCGGTTCCTCAGAGCCAATCCACTTCATTGATACAGCAGCCTGAGTTCTCGCTGGCAATTGCACAATACCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045522.13 ENSMUST00000126214.8 |
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| CDS GCA 90 bp | TCCAGTCGTTTCAGGCTTAAACCATCGCATCCTAGAAGTTCAGTCTaGGTGGATTTATCTACTCTTGAAGCAAACGCCTTCTGTAAATGC | + |
|
Preference number: 5 (lower is better) Translates to: SSRFRLKPSHPRSSV*VDLSTLEANAFCKC Trigger: GCATTTACAGAAGGCGTTTGCTTCAAGAGTAGATAAATCCACGCAGACTGAACTTCTAGGATGCGATGGTTTAAGCCTGAAACGACTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045522.13 ENSMUST00000126214.8 |
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| CDS GCA 90 bp | GTCAGCTGTAGAATATCTAAAACGGTCCTCGGTGGGAGTATGTATTaGTTTTCTGTCCCTTGTGCTGTGACTTTGACTCATGGTTCGATT | + |
|
Preference number: 5 (lower is better) Translates to: VSCRISKTVLGGSMY*FSVPCAVTLTHGSI Trigger: AATCGAACCATGAGTCAAAGTCACAGCACAAGGGACAGAAAAGCAATACATACTCCCACCGAGGACCGTTTTAGATATTCTACAGCTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045522.13 ENSMUST00000126214.8 |
||
| CDS CCA 90 bp | ATTGTGCAATTGCCAGCGAGAACTCAGGCTGCTGTATCAATGAAGTaGATTGGCTCTGAGGAACCGACTTACAAAACTTATAGTGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: IVQLPARTQAAVSMK*IGSEEPTYKTYSEM Trigger: CATCTCACTATAAGTTTTGTAAGTCGGTTCCTCAGAGCCAATCCACTTCATTGATACAGCAGCCTGAGTTCTCGCTGGCAATTGCACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045522.13 ENSMUST00000126214.8 |
||
| CDS-3UTR CAA 90 bp | GCGCTCACTTGTTCCATTAGAACATACCCAGTGTCACCTCCTGGTGTTAATGTGCTTGATCAGTGTCTTTaGTTATTCTCAGGGAAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: ALTCSIRTYPVSPPGVNVLDQCL*LFSGKG Trigger: ACCTTTCCCTGAGAATAACAAAAGACACTGATCAAG...CACATTAACACCAGGAGGTGACACTGGGTATGTTCTAATGGAACAAGTGAGCGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134710.3 |
||
| CDS-3UTR CAA 90 bp | CAGACCTACAAAATCATACAGGGTTTCTATAAGAATATTGGGCTACAATACACTTCTGCAGAGGGACTGTaGGGCATGCAGCTGACATGG | + |
|
Preference number: 5 (lower is better) Translates to: QTYKIIQGFYKNIGLQYTSAEGL*GMQLTW Trigger: CCATGTCAGCTGCATGCCCAACAGTCCCTCTGCAGA...AGTGTATTGTAGCCCAATATTCTTATAGAAACCCTGTATGATTTTGTAGGTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067307.11 |
||
| CDS-3UTR CAA 90 bp | TTGGGAACGCTAAGCAGCAAGCTGCAGTGCCTTTTCCTCTTTAGCAGAATTATGCTTCCGTCAAAGACCTaGTTATCTTCTTACTTCGTG | + |
|
Preference number: 5 (lower is better) Translates to: LGTLSSKLQCLFLFSRIMLPSKT*LSSYFV Trigger: CACGAAGTAAGAAGATAACAAGGTCTTTGACGGAAG...CATAATTCTGCTAAAGAGGAAAAGGCACTGCAGCTTGCTGCTTAGCGTTCCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR CAA 90 bp | TTTCAGGTAGACACAGTTGTCCTTCAAGGAATGACTCTTCTACATCTGGTGTTGCCTTGTGCTGTGACTTaGACTCATGGTTCGATTTCG | + |
|
Preference number: 5 (lower is better) Translates to: FQVDTVVLQGMTLLHLVLPCAVT*THGSIS Trigger: CGAAATCGAACCATGAGTCAAAGTCACAGCACAAGG...CAACACCAGATGTAGAAGAGTCATTCCTTGAAGGACAACTGTGTCTACCTGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126214.8 ENSMUST00000232648.2 |
||
| CDS-3UTR CAA 90 bp | AGAACTTACGATAGCCATACAGAGAAACTTCTGAAAGAACCCCATGCCATTGTTCGGTGGGAGTATGTATaGCTTTTCTGTCCCTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RTYDSHTEKLLKEPHAIVRWEYV*LFCPLC Trigger: GCACAAGGGACAGAAAAGCAATACATACTCCCACCG...AACAATGGCATGGGGTTCTTTCAGAAGTTTCTCTGTATGGCTATCGTAAGTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000126214.8 ENSMUST00000232648.2 |
||
| CDS-3UTR CAA 90 bp | AGAACTTACGATAGCCATACAGAGAAACTTCTGAAAGAACCCCATGCCATTGTTACACAGACCTGGGAGTaGGCAGATATTCTTGTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RTYDSHTEKLLKEPHAIVTQTWE*ADILVG Trigger: CCCTACAAGAATATCTGCCAACTCCCAGGTCTGTGT...AACAATGGCATGGGGTTCTTTCAGAAGTTTCTCTGTATGGCTATCGTAAGTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR CAA 90 bp | GTAGTTACTAGACCTGAACTTTCTCTAAGGAAACAGTCAGTTGATACTCTTATTGCCCTCTCTCCCTCCTaGTACAGCCTCCAGTCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: VVTRPELSLRKQSVDTLIALSPS*YSLQSF Trigger: AAACGACTGGAGGCTGTACAAGGAGGGAGAGAGGGC...AATAAGAGTATCAACTGACTGTTTCCTTAGAGAAAGTTCAGGTCTAGTAACTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232648.2 |
||
| CDS-3UTR CAA 90 bp | ATTAGAACATACCCAGTGTCACCTCCTGGTGTTAATGTGACAGGGAGAGGTTACTGGATTTATCTACTCTaGAAGCAAACGCCTTCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: IRTYPVSPPGVNVTGRGYWIYLL*KQTPSV Trigger: TACAGAAGGCGTTTGCTTCAAGAGTAGATAAATCCA...GTAACCTCTCCCTGTCACATTAACACCAGGAGGTGACACTGGGTATGTTCTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134710.3 |
||
| CDS-3UTR CAA 90 bp | ATACCCTTCCTTTCAAAAGTGAGCAGGTTATCCCAGGGTTTCTTCTTGAATGTTTGTCTTCCCCTGGTTTaGACGTGTTCCTCCAAACTT | + |
|
Preference number: 5 (lower is better) Translates to: IPFLSKVSRLSQGFFLNVCLPLV*TCSSKL Trigger: AAGTTTGGAGGAACACGTCAAAACCAGGGGAAGACA...AACATTCAAGAAGAAACCCTGGGATAACCTGCTCACTTTTGAAAGGAAGGGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR CAA 90 bp | ATACCCTTCCTTTCAAAAGTGAGCAGGTTATCCCAGGGTTTCTTCTTGAATGTTCTACTGGCAAGAACTTaGGCAGCACTCGCTTCATAT | + |
|
Preference number: 5 (lower is better) Translates to: IPFLSKVSRLSQGFFLNVLLART*AALASY Trigger: ATATGAAGCGAGTGCTGCCAAAGTTCTTGCCAGTAG...AACATTCAAGAAGAAACCCTGGGATAACCTGCTCACTTTTGAAAGGAAGGGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR CAA 90 bp | GGTGATCGTTCCAAAAATACCCTTCCTTTCAAAAGTGAGCAGGTTATCCCAGGGACTCCTCCTAATTCCTaGTCCTTCAAGAAATTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: GDRSKNTLPFKSEQVIPGTPPNS*SFKKLL Trigger: TAGCAATTTCTTGAAGGACAAGGAATTAGGAGGAGT...CCCTGGGATAACCTGCTCACTTTTGAAAGGAAGGGTATTTTTGGAACGATCACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS TCA 90 bp | CAGGACATTACAGAGTGGCAGGAATCTTCCCGGCAAACTGGGGGTTaGAGATTCTGTTCCTCTAAAAATTCTAAATCAAGCATTAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: QDITEWQESSRQTGG*RFCSSKNSKSSIKS Trigger: TGACTTAATGCTTGATTTAGAATTTTTAGAGGAACAGAATCTTCAACCCCCAGTTTGCCGGGAAGATTCCTGCCACTCTGTAATGTCCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000045522.13 ENSMUST00000067307.11 ENSMUST00000126214.8 |
||
| CDS TCA 90 bp | AAATCAAGCATTAAGTCATCTTCATCCAGTTCACAGGATCCCAGATaGTTTAAAACGTCCAGACTGTTCATTTTGGAAGAGGAGGACCCC | + |
|
Preference number: 5 (lower is better) Translates to: KSSIKSSSSSSQDPR*FKTSRLFILEEEDP Trigger: GGGGTCCTCCTCTTCCAAAATGAACAGTCTGGACGTTTTAAATCATCTGGGATCCTGTGAACTGGATGAAGATGACTTAATGCTTGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045522.13 ENSMUST00000126214.8 |
||
| CDS GCA 90 bp | GCTCCAAGATGTTTGAGATTTGTATCGCATCCTAGAAGTTCAGTCTaGGTGGATTTATCTACTCTTGAAGCAAACGCCTTCTGTAAATGC | + |
|
Preference number: 5 (lower is better) Translates to: APRCLRFVSHPRSSV*VDLSTLEANAFCKC Trigger: GCATTTACAGAAGGCGTTTGCTTCAAGAGTAGATAAATCCACGCAGACTGAACTTCTAGGATGCGATACAAATCTCAAACATCTTGGAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067307.11 |
||
| CDS-3UTR CAA 90 bp | AACACAGATGAAAATACTGATACAGAACAGTCTCAAGGTGATCGTTCCAAAAATAGTCTCTCTCCCTCCTaGTACAGCCTCCAGTCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: NTDENTDTEQSQGDRSKNSLSPS*YSLQSF Trigger: AAACGACTGGAGGCTGTACAAGGAGGGAGAGAGACT...ATTTTTGGAACGATCACCTTGAGACTGTTCTGTATCAGTATTTTCATCTGTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR CAA 90 bp | ATACCCTTCCTTTCAAAAGTGAGCAGGTTATCCCAGGGTTTCTTCTTGAATGTTTTGCTTTTCTGTCCCTaGTGCTGTGACTTTGACTCA | + |
|
Preference number: 5 (lower is better) Translates to: IPFLSKVSRLSQGFFLNVLLFCP*CCDFDS Trigger: TGAGTCAAAGTCACAGCACAAGGGACAGAAAAGCAA...AACATTCAAGAAGAAACCCTGGGATAACCTGCTCACTTTTGAAAGGAAGGGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000126214.8 ENSMUST00000232648.2 |
||
| CDS-3UTR CAA 90 bp | TTTCAGGTAGACACAGTTGTCCTTCAAGGAATGACTCTTCTACATCTGGTGTTGAAGGCTCAGGACATTTaGGTTCTTCTAGCATATTCA | + |
|
Preference number: 5 (lower is better) Translates to: FQVDTVVLQGMTLLHLVLKAQDI*VLLAYS Trigger: TGAATATGCTAGAAGAACCAAAATGTCCTGAGCCTT...CAACACCAGATGTAGAAGAGTCATTCCTTGAAGGACAACTGTGTCTACCTGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR CAA 90 bp | CAGTCTCAAGGTGATCGTTCCAAAAATACCCTTCCTTTCAAAAGTGAGCAGGTTTGGATTTATCTACTCTaGAAGCAAACGCCTTCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: QSQGDRSKNTLPFKSEQVWIYLL*KQTPSV Trigger: TACAGAAGGCGTTTGCTTCAAGAGTAGATAAATCCA...AACCTGCTCACTTTTGAAAGGAAGGGTATTTTTGGAACGATCACCTTGAGACTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS CCA 90 bp | CCTCTTGATCAGTGTCTTTTGTTATTCTCAGGGAAAGGTTCTGTTTaGAAGGCTCAGGACATTTTGGTTCTTCTAGCATATTCACTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PLDQCLLLFSGKGSV*KAQDILVLLAYSLL Trigger: AAGAAGTGAATATGCTAGAAGAACCAAAATGTCCTGAGCCTTCCAAACAGAACCTTTCCCTGAGAATAACAAAAGACACTGATCAAGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045522.13 ENSMUST00000067307.11 ENSMUST00000126214.8 |
||
| CDS-3UTR CAA 90 bp | ATACCCTTCCTTTCAAAAGTGAGCAGGTTATCCCAGGGTTTCTTCTTGAATGTTCTTGATCAGTGTCTTTaGTTATTCTCAGGGAAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: IPFLSKVSRLSQGFFLNVLDQCL*LFSGKG Trigger: ACCTTTCCCTGAGAATAACAAAAGACACTGATCAAG...AACATTCAAGAAGAAACCCTGGGATAACCTGCTCACTTTTGAAAGGAAGGGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR CAA 90 bp | TTCGATCAGACCTACAAAATCATACAGGGTTTCTATAAGAATATTGGGCTACAAGGAACACCGGGCCTCTaGATCAGTGTCTTTTGTTAT | + |
|
Preference number: 5 (lower is better) Translates to: FDQTYKIIQGFYKNIGLQGTPGL*ISVFCY Trigger: ATAACAAAAGACACTGATCAAGAGGCCCGGTGTTCC...TTGTAGCCCAATATTCTTATAGAAACCCTGTATGATTTTGTAGGTCTGATCGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067307.11 |
||
| CDS-3UTR CAA 90 bp | TTCGATCAGACCTACAAAATCATACAGGGTTTCTATAAGAATATTGGGCTACAAGCTCACATCACTCTCTaGCAGCACTCTCTTCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: FDQTYKIIQGFYKNIGLQAHITL*QHSLHL Trigger: AAGATGAAGAGAGTGCTGCAAGAGAGTGATGTGAGC...TTGTAGCCCAATATTCTTATAGAAACCCTGTATGATTTTGTAGGTCTGATCGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067307.11 |
||
| CDS-3UTR CAA 90 bp | AACACAGATGAAAATACTGATACAGAACAGTCTCAAGGTGATCGTTCCAAAAATATTGCTGTGACTGGGTaGAGCACCATTGGAAATACT | + |
|
Preference number: 5 (lower is better) Translates to: NTDENTDTEQSQGDRSKNIAVTG*STIGNT Trigger: AGTATTTCCAATGGTGCTCAACCCAGTCACAGCAAT...ATTTTTGGAACGATCACCTTGAGACTGTTCTGTATCAGTATTTTCATCTGTGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR CAA 90 bp | AACACAGATGAAAATACTGATACAGAACAGTCTCAAGGTGATCGTTCCAAAAATAATAGAACGGCGACTTaGTTCTTCTGTGAATCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: NTDENTDTEQSQGDRSKNNRTAT*FFCESR Trigger: TCTGGATTCACAGAAGAACAAAGTCGCCGTTCTATT...ATTTTTGGAACGATCACCTTGAGACTGTTCTGTATCAGTATTTTCATCTGTGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126214.8 |
||
| CDS-3UTR CAA 90 bp | TTCGATCAGACCTACAAAATCATACAGGGTTTCTATAAGAATATTGGGCTACAAAAGGCTCAGGACATTTaGGTTCTTCTAGCATATTCA | + |
|
Preference number: 5 (lower is better) Translates to: FDQTYKIIQGFYKNIGLQKAQDI*VLLAYS Trigger: TGAATATGCTAGAAGAACCAAAATGTCCTGAGCCTT...TTGTAGCCCAATATTCTTATAGAAACCCTGTATGATTTTGTAGGTCTGATCGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067307.11 |
||
| CDS-3UTR CAA 90 bp | TTCGATCAGACCTACAAAATCATACAGGGTTTCTATAAGAATATTGGGCTACAACTTGATCAGTGTCTTTaGTTATTCTCAGGGAAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: FDQTYKIIQGFYKNIGLQLDQCL*LFSGKG Trigger: ACCTTTCCCTGAGAATAACAAAAGACACTGATCAAG...TTGTAGCCCAATATTCTTATAGAAACCCTGTATGATTTTGTAGGTCTGATCGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067307.11 |
||
| CDS-3UTR CAA 90 bp | CAGACCTACAAAATCATACAGGGTTTCTATAAGAATATTGGGCTACAATACACTTGGATTTATCTACTCTaGAAGCAAACGCCTTCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: QTYKIIQGFYKNIGLQYTWIYLL*KQTPSV Trigger: TACAGAAGGCGTTTGCTTCAAGAGTAGATAAATCCA...AGTGTATTGTAGCCCAATATTCTTATAGAAACCCTGTATGATTTTGTAGGTCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067307.11 |
||
| CDS CCA 72 bp | CCAATGCCTTGTGCTGGTCATAGGAGCCCAGTGTCCTaGGCGAGCCTGTCCTCAGCGCTGGTTCACCAGCGT | + |
|
Preference number: 6 (lower is better) Translates to: PMPCAGHRSPVS*ASLSSALVHQR Trigger: ACGCTGGTGAACCAGCGCTGAGGACAGGCTCGCCCAGGACACTGGGCTCCTATGACCAGCACAAGGCATTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045522.13 ENSMUST00000126214.8 |
||
| CDS CAA 72 bp | TCCACACCCTGCTGGGGCCAATCTGCAGAGGGACTGTaGGGCATGCAGCTGACATGGGAACACCGGGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: STPCWGQSAEGL*GMQLTWEHRAS Trigger: AGAGGCCCGGTGTTCCCATGTCAGCTGCATGCCCAACAGTCCCTCTGCAGATTGGCCCCAGCAGGGTGTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000045522.13 ENSMUST00000067307.11 ENSMUST00000126214.8 ENSMUST00000134710.3 |
||
| CDS TCA 72 bp | GGGGCCAATCTGCAGAGGGACTGTTGGGCATGCAGCTaGCATGGGAACACCGGGCCTCTTGATCAGTGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: GANLQRDCWACS*HGNTGPLDQCL Trigger: AAGACACTGATCAAGAGGCCCGGTGTTCCCATGTCAGCTGCATGCCCAACAGTCCCTCTGCAGATTGGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000045522.13 ENSMUST00000067307.11 ENSMUST00000126214.8 ENSMUST00000134710.3 |
||
| CDS GCA 72 bp | CGAGACAGGGTGGACCCCTTTAAAGCGTTCAGCCAATaGCTTGTGCTGGTCATAGGAGCCCAGTGTCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: RDRVDPFKAFSQ*LVLVIGAQCPG Trigger: CCCAGGACACTGGGCTCCTATGACCAGCACAAGGCATTGGCTGAACGCTTTAAAGGGGTCCACCCTGTCTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045522.13 ENSMUST00000126214.8 |
||
| CDS GCA 72 bp | CTTCCACATGCCCATCCTTCGGCTTTAAGACCATTCTaGTGCTCCCCGCTGTCCCTTCAGAGGAGGACCGCA | + |
|
Preference number: 6 (lower is better) Translates to: LPHAHPSALRPF*CSPLSLQRRTA Trigger: TGCGGTCCTCCTCTGAAGGGACAGCGGGGAGCAGCAGAATGGTCTTAAAGCCGAAGGATGGGCATGTGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045522.13 ENSMUST00000126214.8 |
||
| CDS GCA 72 bp | GGCAGAGAATCTATGCCTCCATTTTCCTCCACACCCTaGTGGGGCCAATCTGCAGAGGGACTGTTGGGCATG | + |
|
Preference number: 6 (lower is better) Translates to: GRESMPPFSSTP*WGQSAEGLLGM Trigger: CATGCCCAACAGTCCCTCTGCAGATTGGCCCCAGCAGGGTGTGGAGGAAAATGGAGGCATAGATTCTCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000045522.13 ENSMUST00000067307.11 ENSMUST00000126214.8 ENSMUST00000134710.3 |
||
| CDS GCA 72 bp | CAGCAGGGGTCTCTGGTGAAGAATGCAGTTCAGTGCTaGACCGACCTTCTAGCCTGTACCTCCCTGGAGACA | + |
|
Preference number: 6 (lower is better) Translates to: QQGSLVKNAVQC*TDLLACTSLET Trigger: TGTCTCCAGGGAGGTACAGGCTAGAAGGTCGGTGCAGCACTGAACTGCATTCTTCACCAGAGACCCCTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045522.13 ENSMUST00000126214.8 |
||
| CDS GCA 72 bp | TACCAGCAGGGGTCTCTGGTGAAGAATGCAGTTCAGTaGTGCACCGACCTTCTAGCCTGTACCTCCCTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: YQQGSLVKNAVQ*CTDLLACTSLE Trigger: CTCCAGGGAGGTACAGGCTAGAAGGTCGGTGCAGCACTGAACTGCATTCTTCACCAGAGACCCCTGCTGGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045522.13 ENSMUST00000126214.8 |
||
| CDS GCA 72 bp | TCCCTCCGGTTACCAGCAGGGGTCTCTGGTGAAGAATaGAGTTCAGTGCTGCACCGACCTTCTAGCCTGTAC | + |
|
Preference number: 6 (lower is better) Translates to: SLRLPAGVSGEE*SSVLHRPSSLY Trigger: GTACAGGCTAGAAGGTCGGTGCAGCACTGAACTGCATTCTTCACCAGAGACCCCTGCTGGTAACCGGAGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045522.13 ENSMUST00000126214.8 |
||
| CDS CCA 72 bp | AGAGAATCTATGCCTCCATTTTCCTCCACACCCTGCTaGGGCCAATCTGCAGAGGGACTGTTGGGCATGCAG | + |
|
Preference number: 6 (lower is better) Translates to: RESMPPFSSTPC*GQSAEGLLGMQ Trigger: CTGCATGCCCAACAGTCCCTCTGCAGATTGGCCCCAGCAGGGTGTGGAGGAAAATGGAGGCATAGATTCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000045522.13 ENSMUST00000067307.11 ENSMUST00000126214.8 ENSMUST00000134710.3 |
||
| CDS GCA 72 bp | CAGCACTCTCTTCATCTTCAGAAGCAGCGTCTTCACTaGCGTGCACTCCTGGAGCATCAGTCTGAATGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: QHSLHLQKQRLH*RALLEHQSEWQ Trigger: CTGCCATTCAGACTGATGCTCCAGGAGTGCACGGCAGTGAAGACGCTGCTTCTGAAGATGAAGAGAGTGCTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000045522.13 ENSMUST00000067307.11 ENSMUST00000126214.8 ENSMUST00000134710.3 |
||
| CDS GCA 72 bp | GAGCAAGATGGGGAAGGTCTCCCTAAGGCGGCTTCCTaGTCTTGGTATTGTGCAATTGCCAGCGAGAACTCA | + |
|
Preference number: 6 (lower is better) Translates to: EQDGEGLPKAAS*SWYCAIASENS Trigger: TGAGTTCTCGCTGGCAATTGCACAATACCAAGAGCAGGAAGCCGCCTTAGGGAGACCTTCCCCATCTTGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045522.13 ENSMUST00000126214.8 |
||
| CDS GCA 72 bp | CCCGTTCTGTGCTTTCTCAAGCTGCTGGCTTCCACATaGCCATCCTTCGGCTTTAAGACCATTCTGCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: PVLCFLKLLAST*PSFGFKTILLL Trigger: GAGCAGCAGAATGGTCTTAAAGCCGAAGGATGGGCATGTGGAAGCCAGCAGCTTGAGAAAGCACAGAACGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045522.13 ENSMUST00000126214.8 |
||
| CDS GCA 72 bp | TGGAAGAGGAGGACCCCGTTCTGTGCTTTCTCAAGCTaGTGGCTTCCACATGCCCATCCTTCGGCTTTAAGA | + |
|
Preference number: 6 (lower is better) Translates to: WKRRTPFCAFSS*WLPHAHPSALR Trigger: TCTTAAAGCCGAAGGATGGGCATGTGGAAGCCAGCAGCTTGAGAAAGCACAGAACGGGGTCCTCCTCTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045522.13 ENSMUST00000126214.8 |
||
| CDS CCA 72 bp | GTGGGTTCTGGCTTAGGTTCACTGCCCTTCTTATGGTaGAAGCTGATAGAGGGAGCACGGAAGATGCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: VGSGLGSLPFLW*KLIEGARKMLL Trigger: CAGGAGCATCTTCCGTGCTCCCTCTATCAGCTTCCACCATAAGAAGGGCAGTGAACCTAAGCCAGAACCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045522.13 ENSMUST00000126214.8 |
||
| CDS CCA 72 bp | CCAGAGGAAGGGATTACCCTTGAATCCGAGACAGGGTaGACCCCTTTAAAGCGTTCAGCCAATGCCTTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: PEEGITLESETG*TPLKRSANALC Trigger: GCACAAGGCATTGGCTGAACGCTTTAAAGGGGTCCACCCTGTCTCGGATTCAAGGGTAATCCCTTCCTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045522.13 ENSMUST00000126214.8 |
||
| CDS CCA 72 bp | CCGCAGCCGCCGCTCTATATATCTTCCTTCTCGGTATaGACTGAGGCTACTGGCAAGAACTTTGGCAGCACT | + |
|
Preference number: 6 (lower is better) Translates to: PQPPLYISSFSV*TEATGKNFGST Trigger: AGTGCTGCCAAAGTTCTTGCCAGTAGCCTCAGTCCATACCGAGAAGGAAGATATATAGAGCGGCGGCTGCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045522.13 ENSMUST00000126214.8 |
||
| CDS CCA 72 bp | AAGAGGAGGACCCCGTTCTGTGCTTTCTCAAGCTGCTaGCTTCCACATGCCCATCCTTCGGCTTTAAGACCA | + |
|
Preference number: 6 (lower is better) Translates to: KRRTPFCAFSSC*LPHAHPSALRP Trigger: TGGTCTTAAAGCCGAAGGATGGGCATGTGGAAGCCAGCAGCTTGAGAAAGCACAGAACGGGGTCCTCCTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045522.13 ENSMUST00000126214.8 |
||
| CDS TCA 72 bp | GCCGCCGCTCTATATATCTTCCTTCTCGGTATGGACTaGGGCTACTGGCAAGAACTTTGGCAGCACTCGCTT | + |
|
Preference number: 6 (lower is better) Translates to: AAALYIFLLGMD*GYWQELWQHSL Trigger: AAGCGAGTGCTGCCAAAGTTCTTGCCAGTAGCCTCAGTCCATACCGAGAAGGAAGATATATAGAGCGGCGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045522.13 ENSMUST00000126214.8 |
||
| CDS CCA 72 bp | CTTCACTGCCGTGCACTCCTGGAGCATCAGTCTGAATaGCAGAGAATCTATGCCTCCATTTTCCTCCACACC | + |
|
Preference number: 6 (lower is better) Translates to: LHCRALLEHQSE*QRIYASIFLHT Trigger: GGTGTGGAGGAAAATGGAGGCATAGATTCTCTGCCATTCAGACTGATGCTCCAGGAGTGCACGGCAGTGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000045522.13 ENSMUST00000067307.11 ENSMUST00000126214.8 ENSMUST00000134710.3 |
||
| CDS CCA 72 bp | TCAGTGGGTTCTGGCTTAGGTTCACTGCCCTTCTTATaGTGGAAGCTGATAGAGGGAGCACGGAAGATGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SVGSGLGSLPFL*WKLIEGARKML Trigger: GAGCATCTTCCGTGCTCCCTCTATCAGCTTCCACCATAAGAAGGGCAGTGAACCTAAGCCAGAACCCACTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045522.13 ENSMUST00000126214.8 |
||
| CDS TCA 72 bp | GAATCTTCAGTCAAGGCCAAAAATTCTGAAGGGGTCTaGGCTGTGGTCAGGTCAGCAGAAAGCAGAGGCGAC | + |
|
Preference number: 6 (lower is better) Translates to: ESSVKAKNSEGV*AVVRSAESRGD Trigger: GTCGCCTCTGCTTTCTGCTGACCTGACCACAGCTCAGACCCCTTCAGAATTTTTGGCCTTGACTGAAGATTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045522.13 ENSMUST00000126214.8 |
||
| CDS TCA 72 bp | ACAGGGCGCAGTCCCCACAAATTCCATCTTTGTCTTTaGGACAGCAGTAAGACTGGAAGTGGGCTGAGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: TGRSPHKFHLCL*DSSKTGSGLRG Trigger: ACCTCTCAGCCCACTTCCAGTCTTACTGCTGTCTCAAAGACAAAGATGGAATTTGTGGGGACTGCGCCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045522.13 ENSMUST00000126214.8 |
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| CDS CAA 90 bp | AGAGGGACTGTTGGGCATGCAGCTGACATGGGAACACCGGGCCTCTaGATCAGTGTCTTTTGTTATTCTCAGGGAAAGGTTCTGTTTGGA | + |
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Preference number: 6 (lower is better) Translates to: RGTVGHAADMGTPGL*ISVFCYSQGKVLFG Trigger: TCCAAACAGAACCTTTCCCTGAGAATAACAAAAGACACTGATCAAGAGGCCCGGTGTTCCCATGTCAGCTGCATGCCCAACAGTCCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045522.13 ENSMUST00000067307.11 ENSMUST00000126214.8 |
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| CDS TCA 72 bp | TTGGGCATGCAGCTGACATGGGAACACCGGGCCTCTTaGTCAGTGTCTTTTGTTATTCTCAGGGAAAGGTTC | + |
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Preference number: 6 (lower is better) Translates to: LGMQLTWEHRAS*SVSFVILRERF Trigger: GAACCTTTCCCTGAGAATAACAAAAGACACTGATCAAGAGGCCCGGTGTTCCCATGTCAGCTGCATGCCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000045522.13 ENSMUST00000067307.11 ENSMUST00000126214.8 ENSMUST00000134710.3 |
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| CDS CAA 72 bp | GTTGGGCATGCAGCTGACATGGGAACACCGGGCCTCTaGATCAGTGTCTTTTGTTATTCTCAGGGAAAGGTT | + |
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Preference number: 6 (lower is better) Translates to: VGHAADMGTPGL*ISVFCYSQGKV Trigger: AACCTTTCCCTGAGAATAACAAAAGACACTGATCAAGAGGCCCGGTGTTCCCATGTCAGCTGCATGCCCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000045522.13 ENSMUST00000067307.11 ENSMUST00000126214.8 ENSMUST00000134710.3 |
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| CDS CAA 90 bp | CTTGGGGAGCAGCTTCTTGGTGGACTGTTTAATAGAACGGCGACTTaGTTCTTCTGTGAATCCAGAATCGTCCCCTTCACTTCTGCCAGA | + |
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Preference number: 6 (lower is better) Translates to: LGEQLLGGLFNRTAT*FFCESRIVPFTSAR Trigger: TCTGGCAGAAGTGAAGGGGACGATTCTGGATTCACAGAAGAACAAAGTCGCCGTTCTATTAAACAGTCCACCAAGAAGCTGCTCCCCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045522.13 ENSMUST00000126214.8 |
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| CDS CAA 90 bp | CTCGGTGGGAGTATGTATTGCTTTTCTGTCCCTTGTGCTGTGACTTaGACTCATGGTTCGATTTCGGTGTGTAGTCTCTCTCCCTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: LGGSMYCFSVPCAVT*THGSISVCSLSPSL Trigger: CAAGGAGGGAGAGAGACTACACACCGAAATCGAACCATGAGTCAAAGTCACAGCACAAGGGACAGAAAAGCAATACATACTCCCACCGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045522.13 ENSMUST00000126214.8 |
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| CDS GCA 72 bp | CCTCGGTGGGAGTATGTATTGCTTTTCTGTCCCTTGTaGTGTGACTTTGACTCATGGTTCGATTTCGGTGTG | + |
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Preference number: 6 (lower is better) Translates to: PRWEYVLLFCPL*CDFDSWFDFGV Trigger: CACACCGAAATCGAACCATGAGTCAAAGTCACAGCACAAGGGACAGAAAAGCAATACATACTCCCACCGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045522.13 ENSMUST00000126214.8 ENSMUST00000232648.2 |
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| CDS GCA 72 bp | GGATTCCACAGGGCATCGCATCCTAGAAGTTCAGTCTaGGTGGATTTATCTACTCTTGAAGCAAACGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: GFHRASHPRSSV*VDLSTLEANAF Trigger: GAAGGCGTTTGCTTCAAGAGTAGATAAATCCACGCAGACTGAACTTCTAGGATGCGATGCCCTGTGGAATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134710.3 |
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| CDS CAA 72 bp | GGTCCTCGGTGGGAGTATGTATTGCTTTTCTGTCCCTaGTGCTGTGACTTTGACTCATGGTTCGATTTCGGT | + |
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Preference number: 6 (lower is better) Translates to: GPRWEYVLLFCP*CCDFDSWFDFG Trigger: ACCGAAATCGAACCATGAGTCAAAGTCACAGCACAAGGGACAGAAAAGCAATACATACTCCCACCGAGGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045522.13 ENSMUST00000126214.8 ENSMUST00000232648.2 |
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| CDS CAA 90 bp | CTCGGTGGGAGTATGTATTGCTTTTCTGTCCCTTGTGCTGTGACTTaGACTCATGGTTCGATTTCGGTGTGTAGTATAATTGCCTGCGGG | + |
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Preference number: 6 (lower is better) Translates to: LGGSMYCFSVPCAVT*THGSISVCSIIACG Trigger: CCCGCAGGCAATTATACTACACACCGAAATCGAACCATGAGTCAAAGTCACAGCACAAGGGACAGAAAAGCAATACATACTCCCACCGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232648.2 |
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| CDS TCA 72 bp | TGCAATTGCCAGCGAGAACTCAGGCTGCTGTATCAATaGAGTGGATTGGCTCTGAGGAACCGACTTACAAAA | + |
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Preference number: 6 (lower is better) Translates to: CNCQRELRLLYQ*SGLALRNRLTK Trigger: TTTTGTAAGTCGGTTCCTCAGAGCCAATCCACTTCATTGATACAGCAGCCTGAGTTCTCGCTGGCAATTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045522.13 ENSMUST00000126214.8 |
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| CDS GCA 72 bp | ACTCATGGTTCGATTTCGGTGTGTAGTATAATTGCCTaGGGGAAGGTACAGGGACATTTCCATAAGCTGTGC | + |
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Preference number: 6 (lower is better) Translates to: THGSISVCSIIA*GKVQGHFHKLC Trigger: GCACAGCTTATGGAAATGTCCCTGTACCTTCCCGCAGGCAATTATACTACACACCGAAATCGAACCATGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232648.2 |
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| CDS CCA 72 bp | ACCATTGGAAATACTAAGGTTCTGCTCAGTGGGTTCTaGCTTAGGTTCACTGCCCTTCTTATGGTGGAAGCT | + |
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Preference number: 6 (lower is better) Translates to: TIGNTKVLLSGF*LRFTALLMVEA Trigger: AGCTTCCACCATAAGAAGGGCAGTGAACCTAAGCCAGAACCCACTGAGCAGAACCTTAGTATTTCCAATGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045522.13 ENSMUST00000126214.8 |
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| CDS TCA 72 bp | ATCTTCCGTCAAAGACCTTGTTATCTTCTTACTTCGTaGACTGCTGAAACCCACAGAGTGTCTTCCCCTGGT | + |
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Preference number: 6 (lower is better) Translates to: IFRQRPCYLLTS*TAETHRVSSPG Trigger: ACCAGGGGAAGACACTCTGTGGGTTTCAGCAGTTCACGAAGTAAGAAGATAACAAGGTCTTTGACGGAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045522.13 ENSMUST00000126214.8 |
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| CDS CAA 72 bp | GAACTGCTGAAACCCACAGAGTGTCTTCCCCTGGTTTaGACGTGTTCCTCCAAACTTAGTTTCTGCATATTG | + |
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Preference number: 6 (lower is better) Translates to: ELLKPTECLPLV*TCSSKLSFCIL Trigger: CAATATGCAGAAACTAAGTTTGGAGGAACACGTCAAAACCAGGGGAAGACACTCTGTGGGTTTCAGCAGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045522.13 ENSMUST00000126214.8 |
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| CDS CAA 72 bp | CAGCTTCTTGGTGGACTGTTTAATAGAACGGCGACTTaGTTCTTCTGTGAATCCAGAATCGTCCCCTTCACT | + |
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Preference number: 6 (lower is better) Translates to: QLLGGLFNRTAT*FFCESRIVPFT Trigger: AGTGAAGGGGACGATTCTGGATTCACAGAAGAACAAAGTCGCCGTTCTATTAAACAGTCCACCAAGAAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045522.13 ENSMUST00000126214.8 |
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| CDS TCA 72 bp | ACAGAGTGGCAGGAATCTTCCCGGCAAACTGGGGGTTaGAGATTCTGTTCCTCTAAAAATTCTAAATCAAGC | + |
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Preference number: 6 (lower is better) Translates to: TEWQESSRQTGG*RFCSSKNSKSS Trigger: GCTTGATTTAGAATTTTTAGAGGAACAGAATCTTCAACCCCCAGTTTGCCGGGAAGATTCCTGCCACTCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000045522.13 ENSMUST00000067307.11 ENSMUST00000126214.8 |
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| CDS GCA 72 bp | TTCAGGCTTAAACCATCGCATCCTAGAAGTTCAGTCTaGGTGGATTTATCTACTCTTGAAGCAAACGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: FRLKPSHPRSSV*VDLSTLEANAF Trigger: GAAGGCGTTTGCTTCAAGAGTAGATAAATCCACGCAGACTGAACTTCTAGGATGCGATGGTTTAAGCCTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045522.13 ENSMUST00000126214.8 |
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| CDS CAA 90 bp | TTGTTATTCTCAGGGAAAGGTTCTGTTTGGAAGGCTCAGGACATTTaGGTTCTTCTAGCATATTCACTTCTTTTCCTGGATCCACTGGGC | + |
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Preference number: 6 (lower is better) Translates to: LLFSGKGSVWKAQDI*VLLAYSLLFLDPLG Trigger: GCCCAGTGGATCCAGGAAAAGAAGTGAATATGCTAGAAGAACCAAAATGTCCTGAGCCTTCCAAACAGAACCTTTCCCTGAGAATAACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045522.13 ENSMUST00000067307.11 ENSMUST00000126214.8 |
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| CDS GCA 72 bp | AGAATATCTAAAACGGTCCTCGGTGGGAGTATGTATTaGTTTTCTGTCCCTTGTGCTGTGACTTTGACTCAT | + |
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Preference number: 6 (lower is better) Translates to: RISKTVLGGSMY*FSVPCAVTLTH Trigger: ATGAGTCAAAGTCACAGCACAAGGGACAGAAAAGCAATACATACTCCCACCGAGGACCGTTTTAGATATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045522.13 ENSMUST00000126214.8 |
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| CDS CAA 72 bp | AGTATGTATTGCTTTTCTGTCCCTTGTGCTGTGACTTaGACTCATGGTTCGATTTCGGTGTGTAGTCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: SMYCFSVPCAVT*THGSISVCSLS Trigger: AGAGAGACTACACACCGAAATCGAACCATGAGTCAAAGTCACAGCACAAGGGACAGAAAAGCAATACATACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045522.13 ENSMUST00000126214.8 |
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| CDS GCA 72 bp | TGTTTGAGATTTGTATCGCATCCTAGAAGTTCAGTCTaGGTGGATTTATCTACTCTTGAAGCAAACGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: CLRFVSHPRSSV*VDLSTLEANAF Trigger: GAAGGCGTTTGCTTCAAGAGTAGATAAATCCACGCAGACTGAACTTCTAGGATGCGATACAAATCTCAAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067307.11 |
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| CDS CAA 72 bp | TCAGGGAAAGGTTCTGTTTGGAAGGCTCAGGACATTTaGGTTCTTCTAGCATATTCACTTCTTTTCCTGGAT | + |
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Preference number: 6 (lower is better) Translates to: SGKGSVWKAQDI*VLLAYSLLFLD Trigger: ATCCAGGAAAAGAAGTGAATATGCTAGAAGAACCAAAATGTCCTGAGCCTTCCAAACAGAACCTTTCCCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045522.13 ENSMUST00000067307.11 ENSMUST00000126214.8 |
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| CDS TCA 72 bp | ATTAAGTCATCTTCATCCAGTTCACAGGATCCCAGATaGTTTAAAACGTCCAGACTGTTCATTTTGGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: IKSSSSSSQDPR*FKTSRLFILEE Trigger: CTCTTCCAAAATGAACAGTCTGGACGTTTTAAATCATCTGGGATCCTGTGAACTGGATGAAGATGACTTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045522.13 ENSMUST00000126214.8 |
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| CDS CAA 72 bp | AGTATGTATTGCTTTTCTGTCCCTTGTGCTGTGACTTaGACTCATGGTTCGATTTCGGTGTGTAGTATAATT | + |
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Preference number: 6 (lower is better) Translates to: SMYCFSVPCAVT*THGSISVCSII Trigger: AATTATACTACACACCGAAATCGAACCATGAGTCAAAGTCACAGCACAAGGGACAGAAAAGCAATACATACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232648.2 |
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