Pregenerated sensors for CCS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034108Ensembl transcript IDs: ENSMUST00000037246.7, ENSMUST00000235245.2, ENSMUST00000236178.2, ENSMUST00000236451.2, ENSMUST00000236567.2, ENSMUST00000238136.2
Found 146 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGGCCTCGCTCCTCCCAGATAGTGAGGCCATCACAGGAGCAGATCTaGTTGGGGTTCTGGAAAAGGCCGGCAGAGCGTGCAATGATGCCA | + |
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Preference number: 1 (lower is better) Translates to: RPRSSQIVRPSQEQI*LGFWKRPAERAMMP Trigger: TGGCATCATTGCACGCTCTGCCGGCCTTTTCCAGAACCCCAAGCAGATCTGCTCCTGTGATGGCCTCACTATCTGGGAGGAGCGAGGCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000236567.2 ENSMUST00000238136.2 |
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| 3UTR CCA 90 bp | CAGGCCAACCTCTTCCCAGAATTCCCTGTGATCTTGGATAAGGGATaGCCTCCCCGGCCCAGGTCATCTTCCCCCTCATCGATAACCAGG | + |
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Preference number: 1 (lower is better) Translates to: QANLFPEFPVILDKG*PPRPRSSSPSSITR Trigger: CCTGGTTATCGATGAGGGGGAAGATGACCTGGGCCGGGGAGGCCATCCCTTATCCAAGATCACAGGGAATTCTGGGAAGAGGTTGGCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000236567.2 ENSMUST00000238136.2 |
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| 3UTR CCA 90 bp | TCCCAGATAGTGAGGCCATCACAGGAGCAGATCTGCTTGGGGTTCTaGAAAAGGCCGGCAGAGCGTGCAATGATGCCACAGGCCAACCTC | + |
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Preference number: 1 (lower is better) Translates to: SQIVRPSQEQICLGF*KRPAERAMMPQANL Trigger: GAGGTTGGCCTGTGGCATCATTGCACGCTCTGCCGGCCTTTTCCAGAACCCCAAGCAGATCTGCTCCTGTGATGGCCTCACTATCTGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000236567.2 ENSMUST00000238136.2 |
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| 3UTR TCA 90 bp | AAATGGTCCCCACAGCTATTGCAGTCCCTCGTAAGGTCCCCATACTaGTGCACATGGAGTCCATGCAGCCCAGGCTCTAGGCCGTCGATG | + |
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Preference number: 1 (lower is better) Translates to: KWSPQLLQSLVRSPY*CTWSPCSPGSRPSM Trigger: CATCGACGGCCTAGAGCCTGGGCTGCATGGACTCCATGTGCATCAGTATGGGGACCTTACGAGGGACTGCAATAGCTGTGGGGACCATTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238136.2 |
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| 3UTR-3UTR CCA 90 bp | CTTTCGGCCTTGACCGGCAATGGGCCGGCCTCGCTCCTCCCAGATAGTGAGGCCATCTGCTTGGGGTTCTaGAAAAGGCCGGCAGAGCGT | + |
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Preference number: 2 (lower is better) Translates to: LSALTGNGPASLLPDSEAICLGF*KRPAER Trigger: ACGCTCTGCCGGCCTTTTCCAGAACCCCAAGCAGAT...GGCCTCACTATCTGGGAGGAGCGAGGCCGGCCCATTGCCGGTCAAGGCCGAAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236567.2 |
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| 3UTR-3UTR TCA 90 bp | CCGGCAATGGGCCGGCCTCGCTCCTCCCAGATAGTGAGGCCATCACAGGAGCAGTCCCAGAATTCCCTGTaGTCTTGGATAAGGGATGGC | + |
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Preference number: 2 (lower is better) Translates to: PAMGRPRSSQIVRPSQEQSQNSL*SWIRDG Trigger: GCCATCCCTTATCCAAGATCACAGGGAATTCTGGGA...CTGCTCCTGTGATGGCCTCACTATCTGGGAGGAGCGAGGCCGGCCCATTGCCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000236567.2 ENSMUST00000238136.2 |
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| 3UTR-3UTR GCA 90 bp | TTATCCTCTATCCGGAAGGTAGCTCGGCCACCAGCTTCAGCCCGGACATTGCCCAAGGCCGGCAGAGCGTaGAATGATGCCACAGGCCAA | + |
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Preference number: 2 (lower is better) Translates to: LSSIRKVARPPASARTLPKAGRA*NDATGQ Trigger: TTGGCCTGTGGCATCATTGCACGCTCTGCCGGCCTT...GGGCAATGTCCGGGCTGAAGCTGGTGGCCGAGCTACCTTCCGGATAGAGGATAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238136.2 |
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| 3UTR CAA 90 bp | GCAATGATGCCACAGGCCAACCTCTTCCCAGAATTCCCTGTGATCTaGGATAAGGGATGGCCTCCCCGGCCCAGGTCATCTTCCCCCTCA | + |
|
Preference number: 2 (lower is better) Translates to: AMMPQANLFPEFPVI*DKGWPPRPRSSSPS Trigger: TGAGGGGGAAGATGACCTGGGCCGGGGAGGCCATCCCTTATCCAAGATCACAGGGAATTCTGGGAAGAGGTTGGCCTGTGGCATCATTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000236567.2 ENSMUST00000238136.2 |
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| 3UTR-3UTR TCA 90 bp | CCCCTCATCGATAACCAGGCTGCGGCCAATCACATCCCACACCTTCAGCTGTTTCGGCAGAGCGTGCAATaGTGCCACAGGCCAACCTCT | + |
|
Preference number: 2 (lower is better) Translates to: PLIDNQAAANHIPHLQLFRQSVQ*CHRPTS Trigger: AGAGGTTGGCCTGTGGCATCATTGCACGCTCTGCCG...AAACAGCTGAAGGTGTGGGATGTGATTGGCCGCAGCCTGGTTATCGATGAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236567.2 ENSMUST00000238136.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGTACAAGCAAGGGCCCGCAGCTCCCTCTGCAAGAAGATGTTCAGCTACGAGAAGGCCGGCAGAGCGTaGAATGATGCCACAGGCCAA | + |
|
Preference number: 2 (lower is better) Translates to: PVQARARSSLCKKMFSYEKAGRA*NDATGQ Trigger: TTGGCCTGTGGCATCATTGCACGCTCTGCCGGCCTT...CTCGTAGCTGAACATCTTCTTGCAGAGGGAGCTGCGGGCCCTTGCTTGTACAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236567.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGTACAAGCAAGGGCCCGCAGCTCCCTCTGCAAGAAGATGTTCAGCTACGAGATCTTGGATAAGGGATaGCCTCCCCGGCCCAGGTCA | + |
|
Preference number: 2 (lower is better) Translates to: PVQARARSSLCKKMFSYEILDKG*PPRPRS Trigger: TGACCTGGGCCGGGGAGGCCATCCCTTATCCAAGAT...CTCGTAGCTGAACATCTTCTTGCAGAGGGAGCTGCGGGCCCTTGCTTGTACAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236567.2 |
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| 3UTR-3UTR CCA 90 bp | CGGCCAATCACATCCCACACCTTCAGCTGTTTATCCTCTATCCGGAAGGTAGCTAGGAGCAGATCTGCTTaGGGTTCTGGAAAAGGCCGG | + |
|
Preference number: 2 (lower is better) Translates to: RPITSHTFSCLSSIRKVARSRSA*GSGKGR Trigger: CCGGCCTTTTCCAGAACCCCAAGCAGATCTGCTCCT...AGCTACCTTCCGGATAGAGGATAAACAGCTGAAGGTGTGGGATGTGATTGGCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238136.2 |
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| 3UTR-3UTR CCA 90 bp | TCCCCCTCATCGATAACCAGGCTGCGGCCAATCACATCCCACACCTTCAGCTGTCCATCAGGGTTAAAATaGTCCCCACAGCTATTGCAG | + |
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Preference number: 2 (lower is better) Translates to: SPSSITRLRPITSHTFSCPSGLK*SPQLLQ Trigger: CTGCAATAGCTGTGGGGACCATTTTAACCCTGATGG...ACAGCTGAAGGTGTGGGATGTGATTGGCCGCAGCCTGGTTATCGATGAGGGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000238136.2 |
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| 3UTR GCA 72 bp | TCCTCCCAGATAGTGAGGCCATCACAGGAGCAGATCTaGTTGGGGTTCTGGAAAAGGCCGGCAGAGCGTGCA | + |
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Preference number: 3 (lower is better) Translates to: SSQIVRPSQEQI*LGFWKRPAERA Trigger: TGCACGCTCTGCCGGCCTTTTCCAGAACCCCAAGCAGATCTGCTCCTGTGATGGCCTCACTATCTGGGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000236567.2 ENSMUST00000238136.2 |
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| 3UTR CCA 72 bp | GTGAGGCCATCACAGGAGCAGATCTGCTTGGGGTTCTaGAAAAGGCCGGCAGAGCGTGCAATGATGCCACAG | + |
|
Preference number: 3 (lower is better) Translates to: VRPSQEQICLGF*KRPAERAMMPQ Trigger: CTGTGGCATCATTGCACGCTCTGCCGGCCTTTTCCAGAACCCCAAGCAGATCTGCTCCTGTGATGGCCTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000236567.2 ENSMUST00000238136.2 |
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| 3UTR TCA 72 bp | CCACAGCTATTGCAGTCCCTCGTAAGGTCCCCATACTaGTGCACATGGAGTCCATGCAGCCCAGGCTCTAGG | + |
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Preference number: 3 (lower is better) Translates to: PQLLQSLVRSPY*CTWSPCSPGSR Trigger: CCTAGAGCCTGGGCTGCATGGACTCCATGTGCATCAGTATGGGGACCTTACGAGGGACTGCAATAGCTGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238136.2 |
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| 3UTR GCA 72 bp | CTTAGGCCTGTACAAGCAAGGGCCCGCAGCTCCCTCTaGAAGAAGATGTTCAGCTACGAGGACCAAATAACC | + |
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Preference number: 3 (lower is better) Translates to: LRPVQARARSSL*KKMFSYEDQIT Trigger: GGTTATTTGGTCCTCGTAGCTGAACATCTTCTTGCAGAGGGAGCTGCGGGCCCTTGCTTGTACAGGCCTAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000037246.7 ENSMUST00000235245.2 ENSMUST00000236178.2 ENSMUST00000236451.2 ENSMUST00000236567.2 |
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| 3UTR TCA 72 bp | TGCAAGAAGATGTTCAGCTACGAGGACCAAATAACCTaGCATGAGGCTCTGTTTAGAGGTGAGCTGGGGGTT | + |
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Preference number: 3 (lower is better) Translates to: CKKMFSYEDQIT*HEALFRGELGV Trigger: AACCCCCAGCTCACCTCTAAACAGAGCCTCATGTCAGGTTATTTGGTCCTCGTAGCTGAACATCTTCTTGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236567.2 |
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| CDS-3UTR CCA 90 bp | AGGCCTGTACAAGCAAGGGCCCGCAGCTCCCTCTGCAAGAAGATGTTCAGCTACGGCCTTGACCGGCAATaGGCCGGCCTCGCTCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: RPVQARARSSLCKKMFSYGLDRQ*AGLAPP Trigger: GGGAGGAGCGAGGCCGGCCCATTGCCGGTCAAGGCC...GTAGCTGAACATCTTCTTGCAGAGGGAGCTGCGGGCCCTTGCTTGTACAGGCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037246.7 ENSMUST00000235245.2 ENSMUST00000236178.2 ENSMUST00000236451.2 |
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| CDS-3UTR CCA 90 bp | TTAGGCCTGTACAAGCAAGGGCCCGCAGCTCCCTCTGCAAGAAGATGTTCAGCTGGCCTTGACCGGCAATaGGCCGGCCTCGCTCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: LGLYKQGPAAPSARRCSAGLDRQ*AGLAPP Trigger: GGGAGGAGCGAGGCCGGCCCATTGCCGGTCAAGGCC...AGCTGAACATCTTCTTGCAGAGGGAGCTGCGGGCCCTTGCTTGTACAGGCCTAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037246.7 ENSMUST00000235245.2 ENSMUST00000236178.2 ENSMUST00000236451.2 |
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| CDS-3UTR CCA 90 bp | GGCCCGCAGCTCCCTCTGCAAGAAGATGTTCAGCTACGAGGACCAAATAACCTGGGCCTTGACCGGCAATaGGCCGGCCTCGCTCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GPQLPLQEDVQLRGPNNLGLDRQ*AGLAPP Trigger: GGGAGGAGCGAGGCCGGCCCATTGCCGGTCAAGGCC...CAGGTTATTTGGTCCTCGTAGCTGAACATCTTCTTGCAGAGGGAGCTGCGGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037246.7 ENSMUST00000235245.2 ENSMUST00000236178.2 ENSMUST00000236451.2 |
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| CDS-3UTR TCA 90 bp | GCCTGTACAAGCAAGGGCCCGCAGCTCCCTCTGCAAGAAGATGTTCAGCTACGAGAGTCCTTTCGGCCTTaGCCGGCAATGGGCCGGCCT | + |
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Preference number: 4 (lower is better) Translates to: ACTSKGPQLPLQEDVQLRESFRP*PAMGRP Trigger: AGGCCGGCCCATTGCCGGTCAAGGCCGAAAGGACTC...TCGTAGCTGAACATCTTCTTGCAGAGGGAGCTGCGGGCCCTTGCTTGTACAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037246.7 ENSMUST00000235245.2 ENSMUST00000236178.2 ENSMUST00000236451.2 |
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| CDS-3UTR CCA 90 bp | TTCAGGCTACAGCACTTATCTGCCCTGTACTTAGGCCTGTACAAGCAAGGGCCCGGCCTTGACCGGCAATaGGCCGGCCTCGCTCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: FRLQHLSALYLGLYKQGPGLDRQ*AGLAPP Trigger: GGGAGGAGCGAGGCCGGCCCATTGCCGGTCAAGGCC...GGGCCCTTGCTTGTACAGGCCTAAGTACAGGGCAGATAAGTGCTGTAGCCTGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037246.7 ENSMUST00000236178.2 ENSMUST00000236451.2 |
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| CDS-3UTR TCA 90 bp | GGCCCGCAGCTCCCTCTGCAAGAAGATGTTCAGCTACGAGGACCAAATAACCTGGAGTCCTTTCGGCCTTaGCCGGCAATGGGCCGGCCT | + |
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Preference number: 4 (lower is better) Translates to: GPQLPLQEDVQLRGPNNLESFRP*PAMGRP Trigger: AGGCCGGCCCATTGCCGGTCAAGGCCGAAAGGACTC...CAGGTTATTTGGTCCTCGTAGCTGAACATCTTCTTGCAGAGGGAGCTGCGGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037246.7 ENSMUST00000235245.2 ENSMUST00000236178.2 ENSMUST00000236451.2 |
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| CDS-3UTR TCA 90 bp | CTACAGCACTTATCTGCCCTGTACTTAGGCCTGTACAAGCAAGGGCCCGCAGCTGAGTCCTTTCGGCCTTaGCCGGCAATGGGCCGGCCT | + |
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Preference number: 4 (lower is better) Translates to: LQHLSALYLGLYKQGPAAESFRP*PAMGRP Trigger: AGGCCGGCCCATTGCCGGTCAAGGCCGAAAGGACTC...AGCTGCGGGCCCTTGCTTGTACAGGCCTAAGTACAGGGCAGATAAGTGCTGTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037246.7 ENSMUST00000236178.2 ENSMUST00000236451.2 |
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| CDS-3UTR TCA 90 bp | GCTACAGCACTTATCTGCCCTGTACTTAGGCCTGTACAAGCAAGGGCCCGCAGCCGGCAGAGCGTGCAATaGTGCCACAGGCCAACCTCT | + |
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Preference number: 4 (lower is better) Translates to: ATALICPVLRPVQARARSRQSVQ*CHRPTS Trigger: AGAGGTTGGCCTGTGGCATCATTGCACGCTCTGCCG...GCTGCGGGCCCTTGCTTGTACAGGCCTAAGTACAGGGCAGATAAGTGCTGTAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037246.7 ENSMUST00000236178.2 ENSMUST00000236451.2 |
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| CDS-3UTR TCA 90 bp | CTTAGGCCTGTACAAGCAAGGGCCCGCAGCTCCCTCTGCAAGAAGATGTTCAGCCGGCAGAGCGTGCAATaGTGCCACAGGCCAACCTCT | + |
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Preference number: 4 (lower is better) Translates to: LRPVQARARSSLCKKMFSRQSVQ*CHRPTS Trigger: AGAGGTTGGCCTGTGGCATCATTGCACGCTCTGCCG...GCTGAACATCTTCTTGCAGAGGGAGCTGCGGGCCCTTGCTTGTACAGGCCTAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037246.7 ENSMUST00000235245.2 ENSMUST00000236178.2 ENSMUST00000236451.2 |
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| CDS-3UTR TCA 90 bp | CAGGCTACAGCACTTATCTGCCCTGTACTTAGGCCTGTACAAGCAAGGGCCCGCCGGCAGAGCGTGCAATaGTGCCACAGGCCAACCTCT | + |
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Preference number: 4 (lower is better) Translates to: QATALICPVLRPVQARARRQSVQ*CHRPTS Trigger: AGAGGTTGGCCTGTGGCATCATTGCACGCTCTGCCG...GCGGGCCCTTGCTTGTACAGGCCTAAGTACAGGGCAGATAAGTGCTGTAGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037246.7 ENSMUST00000236178.2 ENSMUST00000236451.2 |
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| CDS-3UTR GCA 90 bp | GCTACAGCACTTATCTGCCCTGTACTTAGGCCTGTACAAGCAAGGGCCCGCAGCTGCACATGGAGTCCATaGAGCCCAGGCTCTAGGCCG | + |
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Preference number: 4 (lower is better) Translates to: ATALICPVLRPVQARARSCTWSP*SPGSRP Trigger: CGGCCTAGAGCCTGGGCTGCATGGACTCCATGTGCA...GCTGCGGGCCCTTGCTTGTACAGGCCTAAGTACAGGGCAGATAAGTGCTGTAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037246.7 ENSMUST00000236178.2 ENSMUST00000236451.2 |
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| CDS-3UTR GCA 90 bp | CTACAGCACTTATCTGCCCTGTACTTAGGCCTGTACAAGCAAGGGCCCGCAGCTTGCACATGGAGTCCATaGAGCCCAGGCTCTAGGCCG | + |
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Preference number: 4 (lower is better) Translates to: LQHLSALYLGLYKQGPAACTWSP*SPGSRP Trigger: CGGCCTAGAGCCTGGGCTGCATGGACTCCATGTGCA...AGCTGCGGGCCCTTGCTTGTACAGGCCTAAGTACAGGGCAGATAAGTGCTGTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037246.7 ENSMUST00000236178.2 ENSMUST00000236451.2 |
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| CDS-3UTR GCA 90 bp | GCCTGTACAAGCAAGGGCCCGCAGCTCCCTCTGCAAGAAGATGTTCAGCTACGAAAGGCCGGCAGAGCGTaGAATGATGCCACAGGCCAA | + |
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Preference number: 4 (lower is better) Translates to: ACTSKGPQLPLQEDVQLRKAGRA*NDATGQ Trigger: TTGGCCTGTGGCATCATTGCACGCTCTGCCGGCCTT...TCGTAGCTGAACATCTTCTTGCAGAGGGAGCTGCGGGCCCTTGCTTGTACAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037246.7 ENSMUST00000235245.2 ENSMUST00000236178.2 ENSMUST00000236451.2 |
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| CDS-3UTR GCA 90 bp | TTATCCTCTATCCGGAAGGTAGCTCGGCCACCAGCTTCAGCCCGGACATTGCCCCTCCAGAATGGCCACTaGTGCTCCCAGATTCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: LSSIRKVARPPASARTLPLQNGH*CSQILS Trigger: GGAGAGAATCTGGGAGCAGCAGTGGCCATTCTGGAG...GGGCAATGTCCGGGCTGAAGCTGGTGGCCGAGCTACCTTCCGGATAGAGGATAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238136.2 |
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| CDS-3UTR CCA 90 bp | GCCTGTACAAGCAAGGGCCCGCAGCTCCCTCTGCAAGAAGATGTTCAGCTACGACACAGCCCTCCAGAATaGCCACTGCTGCTCCCAGAT | + |
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Preference number: 4 (lower is better) Translates to: ACTSKGPQLPLQEDVQLRHSPPE*PLLLPD Trigger: ATCTGGGAGCAGCAGTGGCCATTCTGGAGGGCTGTG...TCGTAGCTGAACATCTTCTTGCAGAGGGAGCTGCGGGCCCTTGCTTGTACAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037246.7 ENSMUST00000235245.2 ENSMUST00000236451.2 |
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| CDS-3UTR CCA 90 bp | CTTAGGCCTGTACAAGCAAGGGCCCGCAGCTCCCTCTGCAAGAAGATGTTCAGCCACAGCCCTCCAGAATaGCCACTGCTGCTCCCAGAT | + |
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Preference number: 4 (lower is better) Translates to: LRPVQARARSSLCKKMFSHSPPE*PLLLPD Trigger: ATCTGGGAGCAGCAGTGGCCATTCTGGAGGGCTGTG...GCTGAACATCTTCTTGCAGAGGGAGCTGCGGGCCCTTGCTTGTACAGGCCTAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037246.7 ENSMUST00000235245.2 ENSMUST00000236451.2 |
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| CDS-3UTR CCA 90 bp | GCCTGTACAAGCAAGGGCCCGCAGCTCCCTCTGCAAGAAGATGTTCAGCTACGAATCTTGGATAAGGGATaGCCTCCCCGGCCCAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: ACTSKGPQLPLQEDVQLRILDKG*PPRPRS Trigger: TGACCTGGGCCGGGGAGGCCATCCCTTATCCAAGAT...TCGTAGCTGAACATCTTCTTGCAGAGGGAGCTGCGGGCCCTTGCTTGTACAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037246.7 ENSMUST00000235245.2 ENSMUST00000236178.2 ENSMUST00000236451.2 |
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| CDS-3UTR CCA 90 bp | CAGGCTACAGCACTTATCTGCCCTGTACTTAGGCCTGTACAAGCAAGGGCCCGCAGGATAGCTCCTGGCTaGGCAGAGTCGTCTGCACCA | + |
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Preference number: 4 (lower is better) Translates to: QATALICPVLRPVQARARRIAPG*AESSAP Trigger: TGGTGCAGACGACTCTGCCCAGCCAGGAGCTATCCT...GCGGGCCCTTGCTTGTACAGGCCTAAGTACAGGGCAGATAAGTGCTGTAGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236178.2 |
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| 3UTR CAA 72 bp | CCACAGGCCAACCTCTTCCCAGAATTCCCTGTGATCTaGGATAAGGGATGGCCTCCCCGGCCCAGGTCATCT | + |
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Preference number: 4 (lower is better) Translates to: PQANLFPEFPVI*DKGWPPRPRSS Trigger: AGATGACCTGGGCCGGGGAGGCCATCCCTTATCCAAGATCACAGGGAATTCTGGGAAGAGGTTGGCCTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236567.2 ENSMUST00000238136.2 |
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| CDS-3UTR GCA 90 bp | GGCCCGCAGCTCCCTCTGCAAGAAGATGTTCAGCTACGAGGACCAAATAACCTGCCCTTGAGTACAGCCTaGCTCCCTGTGCTTTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: GPQLPLQEDVQLRGPNNLPLSTA*LPVLSR Trigger: CCTGGAAAGCACAGGGAGGCAGGCTGTACTCAAGGG...CAGGTTATTTGGTCCTCGTAGCTGAACATCTTCTTGCAGAGGGAGCTGCGGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037246.7 ENSMUST00000236567.2 |
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| CDS-3UTR GCA 90 bp | TTCAGGCTACAGCACTTATCTGCCCTGTACTTAGGCCTGTACAAGCAAGGGCCCTGCACATGGAGTCCATaGAGCCCAGGCTCTAGGCCG | + |
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Preference number: 4 (lower is better) Translates to: FRLQHLSALYLGLYKQGPCTWSP*SPGSRP Trigger: CGGCCTAGAGCCTGGGCTGCATGGACTCCATGTGCA...GGGCCCTTGCTTGTACAGGCCTAAGTACAGGGCAGATAAGTGCTGTAGCCTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037246.7 ENSMUST00000236178.2 ENSMUST00000236451.2 |
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| CDS-3UTR GCA 90 bp | TTGACCGGCAATGGGCCGGCCTCGCTCCTCCCAGATAGTGAGGCCATCACAGGAAGGACCCCCATGAGATaGTCCATCAGGGTTAAAATG | + |
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Preference number: 4 (lower is better) Translates to: LTGNGPASLLPDSEAITGRTPMR*SIRVKM Trigger: CATTTTAACCCTGATGGAGCATCTCATGGGGGTCCT...TCCTGTGATGGCCTCACTATCTGGGAGGAGCGAGGCCGGCCCATTGCCGGTCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236567.2 |
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| CDS-3UTR GCA 90 bp | CTTAGGCCTGTACAAGCAAGGGCCCGCAGCTCCCTCTGCAAGAAGATGTTCAGCTCCTTGAGTACAGCCTaGCTCCCTGTGCTTTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LRPVQARARSSLCKKMFSSLSTA*LPVLSR Trigger: CCTGGAAAGCACAGGGAGGCAGGCTGTACTCAAGGA...GCTGAACATCTTCTTGCAGAGGGAGCTGCGGGCCCTTGCTTGTACAGGCCTAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236451.2 |
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| CDS-3UTR CCA 90 bp | TCATCTTCCCCCTCATCGATAACCAGGCTGCGGCCAATCACATCCCACACCTTCCTTGTACCTCCTGGCTaGGCAGAGTCGTCTGCACCA | + |
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Preference number: 4 (lower is better) Translates to: SSSPSSITRLRPITSHTFLVPPG*AESSAP Trigger: TGGTGCAGACGACTCTGCCCAGCCAGGAGGTACAAG...GAAGGTGTGGGATGTGATTGGCCGCAGCCTGGTTATCGATGAGGGGGAAGATGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236567.2 |
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| CDS-3UTR CCA 90 bp | AGGCCTGTACAAGCAAGGGCCCGCAGCTCCCTCTGCAAGAAGATGTTCAGCTACATCTGCTTGGGGTTCTaGAAAAGGCCGGCAGAGCGT | + |
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Preference number: 4 (lower is better) Translates to: RPVQARARSSLCKKMFSYICLGF*KRPAER Trigger: ACGCTCTGCCGGCCTTTTCCAGAACCCCAAGCAGAT...GTAGCTGAACATCTTCTTGCAGAGGGAGCTGCGGGCCCTTGCTTGTACAGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037246.7 ENSMUST00000235245.2 ENSMUST00000236178.2 ENSMUST00000236451.2 |
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| CDS-3UTR CCA 90 bp | CCTGTACAAGCAAGGGCCCGCAGCTCCCTCTGCAAGAAGATGTTCAGCTACGAGATCTGCTTGGGGTTCTaGAAAAGGCCGGCAGAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: PVQARARSSLCKKMFSYEICLGF*KRPAER Trigger: ACGCTCTGCCGGCCTTTTCCAGAACCCCAAGCAGAT...CTCGTAGCTGAACATCTTCTTGCAGAGGGAGCTGCGGGCCCTTGCTTGTACAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037246.7 ENSMUST00000235245.2 ENSMUST00000236178.2 ENSMUST00000236451.2 |
||
| CDS-3UTR CCA 90 bp | GCTACAGCACTTATCTGCCCTGTACTTAGGCCTGTACAAGCAAGGGCCCGCAGCATCTGCTTGGGGTTCTaGAAAAGGCCGGCAGAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: ATALICPVLRPVQARARSICLGF*KRPAER Trigger: ACGCTCTGCCGGCCTTTTCCAGAACCCCAAGCAGAT...GCTGCGGGCCCTTGCTTGTACAGGCCTAAGTACAGGGCAGATAAGTGCTGTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037246.7 ENSMUST00000236178.2 ENSMUST00000236451.2 |
||
| CDS-3UTR CCA 90 bp | CCTGTACAAGCAAGGGCCCGCAGCTCCCTCTGCAAGAAGATGTTCAGCTACGAGAGGAGCAGATCTGCTTaGGGTTCTGGAAAAGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: PVQARARSSLCKKMFSYERSRSA*GSGKGR Trigger: CCGGCCTTTTCCAGAACCCCAAGCAGATCTGCTCCT...CTCGTAGCTGAACATCTTCTTGCAGAGGGAGCTGCGGGCCCTTGCTTGTACAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037246.7 ENSMUST00000235245.2 ENSMUST00000236178.2 ENSMUST00000236451.2 |
||
| CDS-3UTR CCA 90 bp | GCTACAGCACTTATCTGCCCTGTACTTAGGCCTGTACAAGCAAGGGCCCGCAGCAGGAGCAGATCTGCTTaGGGTTCTGGAAAAGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: ATALICPVLRPVQARARSRSRSA*GSGKGR Trigger: CCGGCCTTTTCCAGAACCCCAAGCAGATCTGCTCCT...GCTGCGGGCCCTTGCTTGTACAGGCCTAAGTACAGGGCAGATAAGTGCTGTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037246.7 ENSMUST00000236178.2 ENSMUST00000236451.2 |
||
| CDS-3UTR CCA 90 bp | CTACAGCACTTATCTGCCCTGTACTTAGGCCTGTACAAGCAAGGGCCCGCAGCTTCAGAGGATAGCTCCTaGCTGGGCAGAGTCGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LQHLSALYLGLYKQGPAASEDSS*LGRVVC Trigger: GCAGACGACTCTGCCCAGCCAGGAGCTATCCTCTGA...AGCTGCGGGCCCTTGCTTGTACAGGCCTAAGTACAGGGCAGATAAGTGCTGTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236178.2 |
||
| CDS-3UTR TCA 90 bp | CAGGCTACAGCACTTATCTGCCCTGTACTTAGGCCTGTACAAGCAAGGGCCCGCGCATCCACACAGCTCTaGCAACTCATCTGCACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QATALICPVLRPVQARARASTQL*QLICTA Trigger: TGCAGTGCAGATGAGTTGTCAGAGCTGTGTGGATGC...GCGGGCCCTTGCTTGTACAGGCCTAAGTACAGGGCAGATAAGTGCTGTAGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037246.7 ENSMUST00000236178.2 ENSMUST00000236451.2 |
||
| CDS-3UTR TCA 90 bp | GCCTGTACAAGCAAGGGCCCGCAGCTCCCTCTGCAAGAAGATGTTCAGCTACGAGTAAGGTCCCCATACTaGTGCACATGGAGTCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: ACTSKGPQLPLQEDVQLRVRSPY*CTWSPC Trigger: GCATGGACTCCATGTGCATCAGTATGGGGACCTTAC...TCGTAGCTGAACATCTTCTTGCAGAGGGAGCTGCGGGCCCTTGCTTGTACAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037246.7 ENSMUST00000235245.2 ENSMUST00000236178.2 ENSMUST00000236451.2 |
||
| CDS-3UTR TCA 90 bp | CCTGTACAAGCAAGGGCCCGCAGCTCCCTCTGCAAGAAGATGTTCAGCTACGAGGTAAGGTCCCCATACTaGTGCACATGGAGTCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: PVQARARSSLCKKMFSYEVRSPY*CTWSPC Trigger: GCATGGACTCCATGTGCATCAGTATGGGGACCTTAC...CTCGTAGCTGAACATCTTCTTGCAGAGGGAGCTGCGGGCCCTTGCTTGTACAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037246.7 ENSMUST00000235245.2 ENSMUST00000236178.2 ENSMUST00000236451.2 |
||
| CDS-3UTR TCA 90 bp | AGGCCTGTACAAGCAAGGGCCCGCAGCTCCCTCTGCAAGAAGATGTTCAGCTACGTAAGGTCCCCATACTaGTGCACATGGAGTCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: RPVQARARSSLCKKMFSYVRSPY*CTWSPC Trigger: GCATGGACTCCATGTGCATCAGTATGGGGACCTTAC...GTAGCTGAACATCTTCTTGCAGAGGGAGCTGCGGGCCCTTGCTTGTACAGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037246.7 ENSMUST00000235245.2 ENSMUST00000236178.2 ENSMUST00000236451.2 |
||
| CDS-3UTR GCA 90 bp | GCCTGTACAAGCAAGGGCCCGCAGCTCCCTCTGCAAGAAGATGTTCAGCTACGACCTTTCAGGGTCTTGTaGACAGCATCCACACAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ACTSKGPQLPLQEDVQLRPFRVL*TASTQL Trigger: GAGCTGTGTGGATGCTGTGCACAAGACCCTGAAAGG...TCGTAGCTGAACATCTTCTTGCAGAGGGAGCTGCGGGCCCTTGCTTGTACAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000037246.7 ENSMUST00000235245.2 ENSMUST00000236178.2 ENSMUST00000236451.2 ENSMUST00000236567.2 |
||
| CDS-3UTR GCA 90 bp | CTTAGGCCTGTACAAGCAAGGGCCCGCAGCTCCCTCTGCAAGAAGATGTTCAGCCCTTTCAGGGTCTTGTaGACAGCATCCACACAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LRPVQARARSSLCKKMFSPFRVL*TASTQL Trigger: GAGCTGTGTGGATGCTGTGCACAAGACCCTGAAAGG...GCTGAACATCTTCTTGCAGAGGGAGCTGCGGGCCCTTGCTTGTACAGGCCTAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000037246.7 ENSMUST00000235245.2 ENSMUST00000236178.2 ENSMUST00000236451.2 ENSMUST00000236567.2 |
||
| CDS-3UTR GCA 90 bp | CCTGTACAAGCAAGGGCCCGCAGCTCCCTCTGCAAGAAGATGTTCAGCTACGAGCCTTTCAGGGTCTTGTaGACAGCATCCACACAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PVQARARSSLCKKMFSYEPFRVL*TASTQL Trigger: GAGCTGTGTGGATGCTGTGCACAAGACCCTGAAAGG...CTCGTAGCTGAACATCTTCTTGCAGAGGGAGCTGCGGGCCCTTGCTTGTACAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000037246.7 ENSMUST00000235245.2 ENSMUST00000236178.2 ENSMUST00000236451.2 ENSMUST00000236567.2 |
||
| CDS-3UTR GCA 90 bp | AGGCCTGTACAAGCAAGGGCCCGCAGCTCCCTCTGCAAGAAGATGTTCAGCTACCCTTTCAGGGTCTTGTaGACAGCATCCACACAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RPVQARARSSLCKKMFSYPFRVL*TASTQL Trigger: GAGCTGTGTGGATGCTGTGCACAAGACCCTGAAAGG...GTAGCTGAACATCTTCTTGCAGAGGGAGCTGCGGGCCCTTGCTTGTACAGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000037246.7 ENSMUST00000235245.2 ENSMUST00000236178.2 ENSMUST00000236451.2 ENSMUST00000236567.2 |
||
| CDS-3UTR GCA 90 bp | CCGCAGCTCCCTCTGCAAGAAGATGTTCAGCTACGAGGACCAAATAACCTGACATGCACATGGAGTCCATaGAGCCCAGGCTCTAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: PQLPLQEDVQLRGPNNLTCTWSP*SPGSRP Trigger: CGGCCTAGAGCCTGGGCTGCATGGACTCCATGTGCA...TGTCAGGTTATTTGGTCCTCGTAGCTGAACATCTTCTTGCAGAGGGAGCTGCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037246.7 ENSMUST00000235245.2 ENSMUST00000236178.2 ENSMUST00000236451.2 |
||
| CDS-3UTR GCA 90 bp | TTCAGGCTACAGCACTTATCTGCCCTGTACTTAGGCCTGTACAAGCAAGGGCCCAAGGCCGGCAGAGCGTaGAATGATGCCACAGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: FRLQHLSALYLGLYKQGPKAGRA*NDATGQ Trigger: TTGGCCTGTGGCATCATTGCACGCTCTGCCGGCCTT...GGGCCCTTGCTTGTACAGGCCTAAGTACAGGGCAGATAAGTGCTGTAGCCTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037246.7 ENSMUST00000236178.2 ENSMUST00000236451.2 |
||
| CDS-3UTR GCA 90 bp | GCCTGTACAAGCAAGGGCCCGCAGCTCCCTCTGCAAGAAGATGTTCAGCTACGACAGAATGGCCACTGCTaGTCCCAGATTCTCCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: ACTSKGPQLPLQEDVQLRQNGHC*SQILLE Trigger: CTCAAGGAGAATCTGGGAGCAGCAGTGGCCATTCTG...TCGTAGCTGAACATCTTCTTGCAGAGGGAGCTGCGGGCCCTTGCTTGTACAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236451.2 |
||
| CDS-3UTR CCA 90 bp | GCTACAGCACTTATCTGCCCTGTACTTAGGCCTGTACAAGCAAGGGCCCGCAGCGCTCTAGGCCGTCGATaGTTCCCTCAATCAAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ATALICPVLRPVQARARSALGRR*FPQSSR Trigger: TCTGCTTGATTGAGGGAACCATCGACGGCCTAGAGC...GCTGCGGGCCCTTGCTTGTACAGGCCTAAGTACAGGGCAGATAAGTGCTGTAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037246.7 ENSMUST00000236178.2 ENSMUST00000236451.2 |
||
| CDS-3UTR CCA 90 bp | CTTAGGCCTGTACAAGCAAGGGCCCGCAGCTCCCTCTGCAAGAAGATGTTCAGCGCTCTAGGCCGTCGATaGTTCCCTCAATCAAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LRPVQARARSSLCKKMFSALGRR*FPQSSR Trigger: TCTGCTTGATTGAGGGAACCATCGACGGCCTAGAGC...GCTGAACATCTTCTTGCAGAGGGAGCTGCGGGCCCTTGCTTGTACAGGCCTAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037246.7 ENSMUST00000235245.2 ENSMUST00000236178.2 ENSMUST00000236451.2 |
||
| CDS-3UTR CCA 90 bp | GCCTGTACAAGCAAGGGCCCGCAGCTCCCTCTGCAAGAAGATGTTCAGCTACGAGCTCTAGGCCGTCGATaGTTCCCTCAATCAAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ACTSKGPQLPLQEDVQLRALGRR*FPQSSR Trigger: TCTGCTTGATTGAGGGAACCATCGACGGCCTAGAGC...TCGTAGCTGAACATCTTCTTGCAGAGGGAGCTGCGGGCCCTTGCTTGTACAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037246.7 ENSMUST00000235245.2 ENSMUST00000236178.2 ENSMUST00000236451.2 |
||
| CDS-3UTR CCA 90 bp | TTCAGGCTACAGCACTTATCTGCCCTGTACTTAGGCCTGTACAAGCAAGGGCCCATCTTGGATAAGGGATaGCCTCCCCGGCCCAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: FRLQHLSALYLGLYKQGPILDKG*PPRPRS Trigger: TGACCTGGGCCGGGGAGGCCATCCCTTATCCAAGAT...GGGCCCTTGCTTGTACAGGCCTAAGTACAGGGCAGATAAGTGCTGTAGCCTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037246.7 ENSMUST00000236178.2 ENSMUST00000236451.2 |
||
| CDS-3UTR CCA 90 bp | TTAGGCCTGTACAAGCAAGGGCCCGCAGCTCCCTCTGCAAGAAGATGTTCAGCTAGGAGCAGATCTGCTTaGGGTTCTGGAAAAGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LGLYKQGPAAPSARRCSARSRSA*GSGKGR Trigger: CCGGCCTTTTCCAGAACCCCAAGCAGATCTGCTCCT...AGCTGAACATCTTCTTGCAGAGGGAGCTGCGGGCCCTTGCTTGTACAGGCCTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037246.7 ENSMUST00000235245.2 ENSMUST00000236178.2 ENSMUST00000236451.2 |
||
| CDS-3UTR CCA 90 bp | TCTTCCCCCTCATCGATAACCAGGCTGCGGCCAATCACATCCCACACCTTCAGCGTCCCCACAGGTAATTaGCTACTGCCCATACCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSPSSITRLRPITSHTFSVPTGN*LLPIPL Trigger: CAAGGGTATGGGCAGTAGCCAATTACCTGTGGGGAC...GCTGAAGGTGTGGGATGTGATTGGCCGCAGCCTGGTTATCGATGAGGGGGAAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236567.2 |
||
| CDS-3UTR TCA 90 bp | GGCCCGCAGCTCCCTCTGCAAGAAGATGTTCAGCTACGAGGACCAAATAACCTGGCATCCACACAGCTCTaGCAACTCATCTGCACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GPQLPLQEDVQLRGPNNLASTQL*QLICTA Trigger: TGCAGTGCAGATGAGTTGTCAGAGCTGTGTGGATGC...CAGGTTATTTGGTCCTCGTAGCTGAACATCTTCTTGCAGAGGGAGCTGCGGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000037246.7 ENSMUST00000235245.2 ENSMUST00000236178.2 ENSMUST00000236451.2 ENSMUST00000236567.2 |
||
| CDS-3UTR TCA 90 bp | TTAGGCCTGTACAAGCAAGGGCCCGCAGCTCCCTCTGCAAGAAGATGTTCAGCTGTAAGGTCCCCATACTaGTGCACATGGAGTCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: LGLYKQGPAAPSARRCSAVRSPY*CTWSPC Trigger: GCATGGACTCCATGTGCATCAGTATGGGGACCTTAC...AGCTGAACATCTTCTTGCAGAGGGAGCTGCGGGCCCTTGCTTGTACAGGCCTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037246.7 ENSMUST00000235245.2 ENSMUST00000236178.2 ENSMUST00000236451.2 |
||
| CDS-3UTR TCA 90 bp | GCTACAGCACTTATCTGCCCTGTACTTAGGCCTGTACAAGCAAGGGCCCGCAGCTCCCAGAATTCCCTGTaGTCTTGGATAAGGGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: ATALICPVLRPVQARARSSQNSL*SWIRDG Trigger: GCCATCCCTTATCCAAGATCACAGGGAATTCTGGGA...GCTGCGGGCCCTTGCTTGTACAGGCCTAAGTACAGGGCAGATAAGTGCTGTAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037246.7 ENSMUST00000236178.2 ENSMUST00000236451.2 |
||
| CDS-3UTR TCA 90 bp | CCTGTACAAGCAAGGGCCCGCAGCTCCCTCTGCAAGAAGATGTTCAGCTACGAGTCCCAGAATTCCCTGTaGTCTTGGATAAGGGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: PVQARARSSLCKKMFSYESQNSL*SWIRDG Trigger: GCCATCCCTTATCCAAGATCACAGGGAATTCTGGGA...CTCGTAGCTGAACATCTTCTTGCAGAGGGAGCTGCGGGCCCTTGCTTGTACAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037246.7 ENSMUST00000235245.2 ENSMUST00000236178.2 ENSMUST00000236451.2 |
||
| CDS-3UTR GCA 90 bp | GTTCAGGCTACAGCACTTATCTGCCCTGTACTTAGGCCTGTACAAGCAAGGGCCTGTGCTTTCCAGGAGTaGTTGTACCTCCTGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VQATALICPVLRPVQARACAFQE*LYLLAG Trigger: CCCAGCCAGGAGGTACAAGCACTCCTGGAAAGCACA...GGCCCTTGCTTGTACAGGCCTAAGTACAGGGCAGATAAGTGCTGTAGCCTGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037246.7 ENSMUST00000236451.2 |
||
| CDS-3UTR GCA 90 bp | CCGCAGCTCCCTCTGCAAGAAGATGTTCAGCTACGAGGACCAAATAACCTGACACCCTTGAGTACAGCCTaGCTCCCTGTGCTTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PQLPLQEDVQLRGPNNLTPLSTA*LPVLSR Trigger: CCTGGAAAGCACAGGGAGGCAGGCTGTACTCAAGGG...TGTCAGGTTATTTGGTCCTCGTAGCTGAACATCTTCTTGCAGAGGGAGCTGCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037246.7 ENSMUST00000236567.2 |
||
| CDS-3UTR GCA 90 bp | GCCTGTACAAGCAAGGGCCCGCAGCTCCCTCTGCAAGAAGATGTTCAGCTACGATCACAGGAGCAGATCTaGTTGGGGTTCTGGAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ACTSKGPQLPLQEDVQLRSQEQI*LGFWKR Trigger: CCTTTTCCAGAACCCCAAGCAGATCTGCTCCTGTGA...TCGTAGCTGAACATCTTCTTGCAGAGGGAGCTGCGGGCCCTTGCTTGTACAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037246.7 ENSMUST00000235245.2 ENSMUST00000236178.2 ENSMUST00000236451.2 |
||
| CDS-3UTR CCA 90 bp | CCGCAGCTCCCTCTGCAAGAAGATGTTCAGCTACGAGGACCAAATAACCTGACACTTGTACCTCCTGGCTaGGCAGAGTCGTCTGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: PQLPLQEDVQLRGPNNLTLVPPG*AESSAP Trigger: TGGTGCAGACGACTCTGCCCAGCCAGGAGGTACAAG...TGTCAGGTTATTTGGTCCTCGTAGCTGAACATCTTCTTGCAGAGGGAGCTGCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037246.7 ENSMUST00000236451.2 ENSMUST00000236567.2 |
||
| CDS-3UTR CCA 90 bp | CCGCAGCTCCCTCTGCAAGAAGATGTTCAGCTACGAGGACCAAATAACCTGACAATCTTGGATAAGGGATaGCCTCCCCGGCCCAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PQLPLQEDVQLRGPNNLTILDKG*PPRPRS Trigger: TGACCTGGGCCGGGGAGGCCATCCCTTATCCAAGAT...TGTCAGGTTATTTGGTCCTCGTAGCTGAACATCTTCTTGCAGAGGGAGCTGCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037246.7 ENSMUST00000235245.2 ENSMUST00000236178.2 ENSMUST00000236451.2 |
||
| CDS-3UTR CCA 90 bp | GTTCAGGCTACAGCACTTATCTGCCCTGTACTTAGGCCTGTACAAGCAAGGGCCATCTGCTTGGGGTTCTaGAAAAGGCCGGCAGAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: VQATALICPVLRPVQARAICLGF*KRPAER Trigger: ACGCTCTGCCGGCCTTTTCCAGAACCCCAAGCAGAT...GGCCCTTGCTTGTACAGGCCTAAGTACAGGGCAGATAAGTGCTGTAGCCTGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037246.7 ENSMUST00000236178.2 ENSMUST00000236451.2 |
||
| CDS-3UTR TCA 90 bp | TTCAGGCTACAGCACTTATCTGCCCTGTACTTAGGCCTGTACAAGCAAGGGCCCGCATCCACACAGCTCTaGCAACTCATCTGCACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FRLQHLSALYLGLYKQGPASTQL*QLICTA Trigger: TGCAGTGCAGATGAGTTGTCAGAGCTGTGTGGATGC...GGGCCCTTGCTTGTACAGGCCTAAGTACAGGGCAGATAAGTGCTGTAGCCTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037246.7 ENSMUST00000236178.2 ENSMUST00000236451.2 |
||
| CDS-3UTR TCA 90 bp | GTTCAGGCTACAGCACTTATCTGCCCTGTACTTAGGCCTGTACAAGCAAGGGCCGCATCCACACAGCTCTaGCAACTCATCTGCACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VQATALICPVLRPVQARAASTQL*QLICTA Trigger: TGCAGTGCAGATGAGTTGTCAGAGCTGTGTGGATGC...GGCCCTTGCTTGTACAGGCCTAAGTACAGGGCAGATAAGTGCTGTAGCCTGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037246.7 ENSMUST00000236178.2 ENSMUST00000236451.2 |
||
| CDS-3UTR TCA 90 bp | TTAGGCCTGTACAAGCAAGGGCCCGCAGCTCCCTCTGCAAGAAGATGTTCAGCTTCCCAGAATTCCCTGTaGTCTTGGATAAGGGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: LGLYKQGPAAPSARRCSASQNSL*SWIRDG Trigger: GCCATCCCTTATCCAAGATCACAGGGAATTCTGGGA...AGCTGAACATCTTCTTGCAGAGGGAGCTGCGGGCCCTTGCTTGTACAGGCCTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037246.7 ENSMUST00000235245.2 ENSMUST00000236178.2 ENSMUST00000236451.2 |
||
| CDS-3UTR GCA 90 bp | CCGCAGCTCCCTCTGCAAGAAGATGTTCAGCTACGAGGACCAAATAACCTGACATGTGCTTTCCAGGAGTaGTTGTACCTCCTGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PQLPLQEDVQLRGPNNLTCAFQE*LYLLAG Trigger: CCCAGCCAGGAGGTACAAGCACTCCTGGAAAGCACA...TGTCAGGTTATTTGGTCCTCGTAGCTGAACATCTTCTTGCAGAGGGAGCTGCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037246.7 ENSMUST00000236451.2 ENSMUST00000236567.2 |
||
| CDS-3UTR GCA 90 bp | AGGCCTGTACAAGCAAGGGCCCGCAGCTCCCTCTGCAAGAAGATGTTCAGCTACAGGACCCCCATGAGATaGTCCATCAGGGTTAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: RPVQARARSSLCKKMFSYRTPMR*SIRVKM Trigger: CATTTTAACCCTGATGGAGCATCTCATGGGGGTCCT...GTAGCTGAACATCTTCTTGCAGAGGGAGCTGCGGGCCCTTGCTTGTACAGGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000037246.7 ENSMUST00000235245.2 ENSMUST00000236178.2 ENSMUST00000236451.2 ENSMUST00000236567.2 |
||
| CDS-3UTR GCA 90 bp | CCTGTACAAGCAAGGGCCCGCAGCTCCCTCTGCAAGAAGATGTTCAGCTACGAGAGGACCCCCATGAGATaGTCCATCAGGGTTAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: PVQARARSSLCKKMFSYERTPMR*SIRVKM Trigger: CATTTTAACCCTGATGGAGCATCTCATGGGGGTCCT...CTCGTAGCTGAACATCTTCTTGCAGAGGGAGCTGCGGGCCCTTGCTTGTACAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000037246.7 ENSMUST00000235245.2 ENSMUST00000236178.2 ENSMUST00000236451.2 ENSMUST00000236567.2 |
||
| CDS-3UTR GCA 90 bp | CTACAGCACTTATCTGCCCTGTACTTAGGCCTGTACAAGCAAGGGCCCGCAGCTTCACAGGAGCAGATCTaGTTGGGGTTCTGGAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LQHLSALYLGLYKQGPAASQEQI*LGFWKR Trigger: CCTTTTCCAGAACCCCAAGCAGATCTGCTCCTGTGA...AGCTGCGGGCCCTTGCTTGTACAGGCCTAAGTACAGGGCAGATAAGTGCTGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037246.7 ENSMUST00000236178.2 ENSMUST00000236451.2 |
||
| CDS-3UTR GCA 90 bp | GTTCAGGCTACAGCACTTATCTGCCCTGTACTTAGGCCTGTACAAGCAAGGGCCCTCCAGAATGGCCACTaGTGCTCCCAGATTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VQATALICPVLRPVQARALQNGH*CSQILL Trigger: AAGGAGAATCTGGGAGCAGCAGTGGCCATTCTGGAG...GGCCCTTGCTTGTACAGGCCTAAGTACAGGGCAGATAAGTGCTGTAGCCTGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236451.2 |
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| CDS-3UTR CCA 90 bp | AGGCCTGTACAAGCAAGGGCCCGCAGCTCCCTCTGCAAGAAGATGTTCAGCTACCCCAGATTCTGTAATTaGCTACTGCCCATACCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RPVQARARSSLCKKMFSYPRFCN*LLPIPL Trigger: CAAGGGTATGGGCAGTAGCCAATTACAGAATCTGGG...GTAGCTGAACATCTTCTTGCAGAGGGAGCTGCGGGCCCTTGCTTGTACAGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037246.7 |
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| CDS-3UTR CCA 90 bp | CTTAGGCCTGTACAAGCAAGGGCCCGCAGCTCCCTCTGCAAGAAGATGTTCAGCCCATCAGGGTTAAAATaGTCCCCACAGCTATTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LRPVQARARSSLCKKMFSPSGLK*SPQLLQ Trigger: CTGCAATAGCTGTGGGGACCATTTTAACCCTGATGG...GCTGAACATCTTCTTGCAGAGGGAGCTGCGGGCCCTTGCTTGTACAGGCCTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037246.7 ENSMUST00000235245.2 ENSMUST00000236178.2 ENSMUST00000236451.2 |
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| CDS-3UTR CCA 90 bp | CCGCAGCTCCCTCTGCAAGAAGATGTTCAGCTACGAGGACCAAATAACCTGACAAGGAGCAGATCTGCTTaGGGTTCTGGAAAAGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: PQLPLQEDVQLRGPNNLTRSRSA*GSGKGR Trigger: CCGGCCTTTTCCAGAACCCCAAGCAGATCTGCTCCT...TGTCAGGTTATTTGGTCCTCGTAGCTGAACATCTTCTTGCAGAGGGAGCTGCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037246.7 ENSMUST00000235245.2 ENSMUST00000236178.2 ENSMUST00000236451.2 |
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| CDS-3UTR CCA 90 bp | CGGCCAATCACATCCCACACCTTCAGCTGTTTATCCTCTATCCGGAAGGTAGCTAGATTCTCTCCTGGCTaGGCAGAGTCGTCTGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: RPITSHTFSCLSSIRKVARFSPG*AESSAP Trigger: TGGTGCAGACGACTCTGCCCAGCCAGGAGAGAATCT...AGCTACCTTCCGGATAGAGGATAAACAGCTGAAGGTGTGGGATGTGATTGGCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238136.2 |
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| CDS-3UTR CCA 90 bp | TCCCCCTCATCGATAACCAGGCTGCGGCCAATCACATCCCACACCTTCAGCTGTCCATCAGGGTTAAAATaGTCCCCACAGGTAATTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SPSSITRLRPITSHTFSCPSGLK*SPQVIG Trigger: GCCAATTACCTGTGGGGACCATTTTAACCCTGATGG...ACAGCTGAAGGTGTGGGATGTGATTGGCCGCAGCCTGGTTATCGATGAGGGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000236567.2 |
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| CDS-3UTR TCA 90 bp | CCGCAGCTCCCTCTGCAAGAAGATGTTCAGCTACGAGGACCAAATAACCTGACAGCATCCACACAGCTCTaGCAACTCATCTGCACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PQLPLQEDVQLRGPNNLTASTQL*QLICTA Trigger: TGCAGTGCAGATGAGTTGTCAGAGCTGTGTGGATGC...TGTCAGGTTATTTGGTCCTCGTAGCTGAACATCTTCTTGCAGAGGGAGCTGCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000037246.7 ENSMUST00000235245.2 ENSMUST00000236178.2 ENSMUST00000236451.2 ENSMUST00000236567.2 |
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| CDS-3UTR TCA 90 bp | GTTCAGGCTACAGCACTTATCTGCCCTGTACTTAGGCCTGTACAAGCAAGGGCCTCCCAGAATTCCCTGTaGTCTTGGATAAGGGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: VQATALICPVLRPVQARASQNSL*SWIRDG Trigger: GCCATCCCTTATCCAAGATCACAGGGAATTCTGGGA...GGCCCTTGCTTGTACAGGCCTAAGTACAGGGCAGATAAGTGCTGTAGCCTGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037246.7 ENSMUST00000236178.2 ENSMUST00000236451.2 |
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| CDS-3UTR GCA 90 bp | CCGCAGCTCCCTCTGCAAGAAGATGTTCAGCTACGAGGACCAAATAACCTGACACCTTTCAGGGTCTTGTaGACAGCATCCACACAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PQLPLQEDVQLRGPNNLTPFRVL*TASTQL Trigger: GAGCTGTGTGGATGCTGTGCACAAGACCCTGAAAGG...TGTCAGGTTATTTGGTCCTCGTAGCTGAACATCTTCTTGCAGAGGGAGCTGCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000037246.7 ENSMUST00000235245.2 ENSMUST00000236178.2 ENSMUST00000236451.2 ENSMUST00000236567.2 |
||
| CDS-3UTR GCA 90 bp | GCAATGATGCCACAGGCCAACCTCTTCCCAGAATTCCCTGTGATCTTGGATAAGTGTGCTTTCCAGGAGTaGTTGTACCTCCTGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: AMMPQANLFPEFPVILDKCAFQE*LYLLAG Trigger: CCCAGCCAGGAGGTACAAGCACTCCTGGAAAGCACA...CTTATCCAAGATCACAGGGAATTCTGGGAAGAGGTTGGCCTGTGGCATCATTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236567.2 |
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| CDS-3UTR GCA 90 bp | TTAGGCCTGTACAAGCAAGGGCCCGCAGCTCCCTCTGCAAGAAGATGTTCAGCTAGGACCCCCATGAGATaGTCCATCAGGGTTAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: LGLYKQGPAAPSARRCSARTPMR*SIRVKM Trigger: CATTTTAACCCTGATGGAGCATCTCATGGGGGTCCT...AGCTGAACATCTTCTTGCAGAGGGAGCTGCGGGCCCTTGCTTGTACAGGCCTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000037246.7 ENSMUST00000235245.2 ENSMUST00000236178.2 ENSMUST00000236451.2 ENSMUST00000236567.2 |
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| CDS-3UTR GCA 90 bp | GGCCCGCAGCTCCCTCTGCAAGAAGATGTTCAGCTACGAGGACCAAATAACCTGAGGACCCCCATGAGATaGTCCATCAGGGTTAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: GPQLPLQEDVQLRGPNNLRTPMR*SIRVKM Trigger: CATTTTAACCCTGATGGAGCATCTCATGGGGGTCCT...CAGGTTATTTGGTCCTCGTAGCTGAACATCTTCTTGCAGAGGGAGCTGCGGGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000037246.7 ENSMUST00000235245.2 ENSMUST00000236178.2 ENSMUST00000236451.2 ENSMUST00000236567.2 |
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| CDS-3UTR CCA 90 bp | TTAGGCCTGTACAAGCAAGGGCCCGCAGCTCCCTCTGCAAGAAGATGTTCAGCTCCATCAGGGTTAAAATaGTCCCCACAGCTATTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LGLYKQGPAAPSARRCSAPSGLK*SPQLLQ Trigger: CTGCAATAGCTGTGGGGACCATTTTAACCCTGATGG...AGCTGAACATCTTCTTGCAGAGGGAGCTGCGGGCCCTTGCTTGTACAGGCCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037246.7 ENSMUST00000235245.2 ENSMUST00000236178.2 ENSMUST00000236451.2 |
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| CDS-3UTR CCA 90 bp | GGCCCGCAGCTCCCTCTGCAAGAAGATGTTCAGCTACGAGGACCAAATAACCTGCCATCAGGGTTAAAATaGTCCCCACAGCTATTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GPQLPLQEDVQLRGPNNLPSGLK*SPQLLQ Trigger: CTGCAATAGCTGTGGGGACCATTTTAACCCTGATGG...CAGGTTATTTGGTCCTCGTAGCTGAACATCTTCTTGCAGAGGGAGCTGCGGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037246.7 ENSMUST00000235245.2 ENSMUST00000236178.2 ENSMUST00000236451.2 |
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| CDS-3UTR GCA 90 bp | CCGCAGCTCCCTCTGCAAGAAGATGTTCAGCTACGAGGACCAAATAACCTGACATCACAGGAGCAGATCTaGTTGGGGTTCTGGAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PQLPLQEDVQLRGPNNLTSQEQI*LGFWKR Trigger: CCTTTTCCAGAACCCCAAGCAGATCTGCTCCTGTGA...TGTCAGGTTATTTGGTCCTCGTAGCTGAACATCTTCTTGCAGAGGGAGCTGCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037246.7 ENSMUST00000235245.2 ENSMUST00000236178.2 ENSMUST00000236451.2 |
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| CDS-3UTR CCA 90 bp | TTCAGGCTACAGCACTTATCTGCCCTGTACTTAGGCCTGTACAAGCAAGGGCCCCCATCAGGGTTAAAATaGTCCCCACAGCTATTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FRLQHLSALYLGLYKQGPPSGLK*SPQLLQ Trigger: CTGCAATAGCTGTGGGGACCATTTTAACCCTGATGG...GGGCCCTTGCTTGTACAGGCCTAAGTACAGGGCAGATAAGTGCTGTAGCCTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000037246.7 ENSMUST00000236178.2 ENSMUST00000236451.2 |
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| CDS-3UTR GCA 90 bp | CCATATGAAAGTAACAATTTAATTTGTTCAGGCTACAGCACTTATCTGCCCTGTAAGGCCGGCAGAGCGTaGAATGATGCCACAGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PYESNNLICSGYSTYLPCKAGRA*NDATGQ Trigger: TTGGCCTGTGGCATCATTGCACGCTCTGCCGGCCTT...ACAGGGCAGATAAGTGCTGTAGCCTGAACAAATTAAATTGTTACTTTCATATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037246.7 ENSMUST00000236178.2 ENSMUST00000236451.2 |
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| CDS-3UTR CCA 90 bp | CCATATGAAAGTAACAATTTAATTTGTTCAGGCTACAGCACTTATCTGCCCTGTATCTTGGATAAGGGATaGCCTCCCCGGCCCAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PYESNNLICSGYSTYLPCILDKG*PPRPRS Trigger: TGACCTGGGCCGGGGAGGCCATCCCTTATCCAAGAT...ACAGGGCAGATAAGTGCTGTAGCCTGAACAAATTAAATTGTTACTTTCATATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037246.7 ENSMUST00000236178.2 ENSMUST00000236451.2 |
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| CDS-3UTR GCA 90 bp | CCATATGAAAGTAACAATTTAATTTGTTCAGGCTACAGCACTTATCTGCCCTGTTCACAGGAGCAGATCTaGTTGGGGTTCTGGAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PYESNNLICSGYSTYLPCSQEQI*LGFWKR Trigger: CCTTTTCCAGAACCCCAAGCAGATCTGCTCCTGTGA...ACAGGGCAGATAAGTGCTGTAGCCTGAACAAATTAAATTGTTACTTTCATATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037246.7 ENSMUST00000236178.2 ENSMUST00000236451.2 |
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| CDS GCA 90 bp | GCGGACCACCCCCTGTATGGAGCCACAGCCCTCCAGAATGGCCACTaGTGCTCCCAGATTCTCTCCTGGCTGGGCAGAGTCGTCTGCACC | + |
|
Preference number: 5 (lower is better) Translates to: ADHPLYGATALQNGH*CSQILSWLGRVVCT Trigger: GGTGCAGACGACTCTGCCCAGCCAGGAGAGAATCTGGGAGCAGCAGTGGCCATTCTGGAGGGCTGTGGCTCCATACAGGGGGTGGTCCGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238136.2 |
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| CDS-3UTR CAA 90 bp | GGGCTGAGTCCTTTCGGCCTTGACCGGCAATGGGCCGGCCTCGCTCCTCCCAGACTACTGCCCATACCCTaGAGTACAGCCTGCCTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: GLSPFGLDRQWAGLAPPRLLPIP*STACLP Trigger: AGGGAGGCAGGCTGTACTCAAGGGTATGGGCAGTAG...TCTGGGAGGAGCGAGGCCGGCCCATTGCCGGTCAAGGCCGAAAGGACTCAGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236567.2 |
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| CDS GCA 90 bp | GCGGACCACCCCCTGTATGGAGCCACAGCCCTCCAGAATGGCCACTaGTGCTCCCAGATTCTCTGCCACCCCTTTCAGGGTCTTGTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: ADHPLYGATALQNGH*CSQILCHPFQGLVH Trigger: GTGCACAAGACCCTGAAAGGGGTGGCAGAGAATCTGGGAGCAGCAGTGGCCATTCTGGAGGGCTGTGGCTCCATACAGGGGGTGGTCCGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235245.2 |
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| CDS GCA 90 bp | GCGGACCACCCCCTGTATGGAGCCACAGCCCTCCAGAATGGCCACTaGTGCTCCCAGATTCTCCTTGAGTACAGCCTGCCTCCCTGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: ADHPLYGATALQNGH*CSQILLEYSLPPCA Trigger: AGCACAGGGAGGCAGGCTGTACTCAAGGAGAATCTGGGAGCAGCAGTGGCCATTCTGGAGGGCTGTGGCTCCATACAGGGGGTGGTCCGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236451.2 |
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| CDS-3UTR CAA 90 bp | CGGCCTCGCTCCTCCCAGATAGTGAGGCCATCACAGGAGCAGATCTGCTTGGGGGCTTTCCAGGAGTGCTaGTACCTCCTGGCTGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RPRSSQIVRPSQEQICLGAFQEC*YLLAGQ Trigger: CTGCCCAGCCAGGAGGTACAAGCACTCCTGGAAAGC...CCCCAAGCAGATCTGCTCCTGTGATGGCCTCACTATCTGGGAGGAGCGAGGCCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236567.2 |
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| CDS CCA 90 bp | GTAGGAAGCGGACCACCCCCTGTATGGAGCCACAGCCCTCCAGAATaGCCACTGCTGCTCCCAGATTCTCTGCCACCCCTTTCAGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: VGSGPPPVWSHSPPE*PLLLPDSLPPLSGS Trigger: AGACCCTGAAAGGGGTGGCAGAGAATCTGGGAGCAGCAGTGGCCATTCTGGAGGGCTGTGGCTCCATACAGGGGGTGGTCCGCTTCCTAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235245.2 |
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| CDS GCA 90 bp | GACCACCCCCTGTATGGAGCCACAGCCCTCCAGAATGGCCACTGCTaGTCCCAGATTCTCCTTGAGTACAGCCTGCCTCCCTGTGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: DHPLYGATALQNGHC*SQILLEYSLPPCAF Trigger: GAAAGCACAGGGAGGCAGGCTGTACTCAAGGAGAATCTGGGAGCAGCAGTGGCCATTCTGGAGGGCTGTGGCTCCATACAGGGGGTGGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236451.2 |
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| CDS CCA 90 bp | GCCACAGCCCTCCAGAATGGCCACTGCTGCTCCCAGATTCTCTCCTaGCTGGGCAGAGTCGTCTGCACCAACACCATCTGGTTCTCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: ATALQNGHCCSQILS*LGRVVCTNTIWFSN Trigger: GTTGGAGAACCAGATGGTGTTGGTGCAGACGACTCTGCCCAGCCAGGAGAGAATCTGGGAGCAGCAGTGGCCATTCTGGAGGGCTGTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238136.2 |
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| CDS GCA 90 bp | GTCCCCACAGGTAATTGGCTACTGCCCATACCCTTGAGTACAGCCTaGCTCCCTGTGCTTTCCAGGAGTGCTTGTACCTCCTGGCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: VPTGNWLLPIPLSTA*LPVLSRSACTSWLG Trigger: GCCCAGCCAGGAGGTACAAGCACTCCTGGAAAGCACAGGGAGGCAGGCTGTACTCAAGGGTATGGGCAGTAGCCAATTACCTGTGGGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236567.2 |
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| CDS-3UTR CAA 90 bp | CAGGCTACAGCACTTATCTGCCCTGTACTTAGGCCTGTACAAGCAAGGGCCCGCGCTTTCCAGGAGTGCTaGTACCTCCTGGCTGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QATALICPVLRPVQARARAFQEC*YLLAGQ Trigger: CTGCCCAGCCAGGAGGTACAAGCACTCCTGGAAAGC...GCGGGCCCTTGCTTGTACAGGCCTAAGTACAGGGCAGATAAGTGCTGTAGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037246.7 ENSMUST00000236451.2 |
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| CDS CCA 90 bp | CAGCCTGCCTCCCTGTGCTTTCCAGGAGTGCTTGTACCTCCTGGCTaGGCAGAGTCGTCTGCACCAACACCATCTGGTTCTCCAACTGAA | + |
|
Preference number: 5 (lower is better) Translates to: QPASLCFPGVLVPPG*AESSAPTPSGSPTE Trigger: TTCAGTTGGAGAACCAGATGGTGTTGGTGCAGACGACTCTGCCCAGCCAGGAGGTACAAGCACTCCTGGAAAGCACAGGGAGGCAGGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037246.7 ENSMUST00000236451.2 ENSMUST00000236567.2 |
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| CDS CCA 90 bp | AGTACAGCCTGCCTCCCTGTGCTTTCCAGGAGTGCTTGTACCTCCTaGCTGGGCAGAGTCGTCTGCACCAACACCATCTGGTTCTCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: STACLPVLSRSACTS*LGRVVCTNTIWFSN Trigger: GTTGGAGAACCAGATGGTGTTGGTGCAGACGACTCTGCCCAGCCAGGAGGTACAAGCACTCCTGGAAAGCACAGGGAGGCAGGCTGTACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037246.7 ENSMUST00000236451.2 ENSMUST00000236567.2 |
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| CDS CCA 90 bp | GTAGGAAGCGGACCACCCCCTGTATGGAGCCACAGCCCTCCAGAATaGCCACTGCTGCTCCCAGATTCTGTAATTGGCTACTGCCCATAC | + |
|
Preference number: 5 (lower is better) Translates to: VGSGPPPVWSHSPPE*PLLLPDSVIGYCPY Trigger: GTATGGGCAGTAGCCAATTACAGAATCTGGGAGCAGCAGTGGCCATTCTGGAGGGCTGTGGCTCCATACAGGGGGTGGTCCGCTTCCTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037246.7 |
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| CDS CCA 90 bp | CAGCCCTCCAGAATGGCCACTGCTGCTCCCAGATTCTCTCCTGGCTaGGCAGAGTCGTCTGCACCAACACCATCTGGTTCTCCAACTGAA | + |
|
Preference number: 5 (lower is better) Translates to: QPSRMATAAPRFSPG*AESSAPTPSGSPTE Trigger: TTCAGTTGGAGAACCAGATGGTGTTGGTGCAGACGACTCTGCCCAGCCAGGAGAGAATCTGGGAGCAGCAGTGGCCATTCTGGAGGGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238136.2 |
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| CDS-3UTR CAA 90 bp | AGGCCTGTACAAGCAAGGGCCCGCAGCTCCCTCTGCAAGAAGATGTTCAGCTACCTACTGCCCATACCCTaGAGTACAGCCTGCCTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: RPVQARARSSLCKKMFSYLLPIP*STACLP Trigger: AGGGAGGCAGGCTGTACTCAAGGGTATGGGCAGTAG...GTAGCTGAACATCTTCTTGCAGAGGGAGCTGCGGGCCCTTGCTTGTACAGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037246.7 ENSMUST00000236567.2 |
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| CDS TCA 90 bp | TGGCTGGGCAGAGTCGTCTGCACCAACACCATCTGGTTCTCCAACTaGACGTCCACATTCTGGACACCTGCCACCCCTTTCAGGGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: WLGRVVCTNTIWFSN*TSTFWTPATPFRVL Trigger: CAAGACCCTGAAAGGGGTGGCAGGTGTCCAGAATGTGGACGTTCAGTTGGAGAACCAGATGGTGTTGGTGCAGACGACTCTGCCCAGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037246.7 ENSMUST00000236178.2 ENSMUST00000236451.2 ENSMUST00000236567.2 ENSMUST00000238136.2 |
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| CDS GCA 90 bp | GGTCTTGTGCACAGCATCCACACAGCTCTGACAACTCATCTGCACTaGAAACTCCAACGCACACACAGTCCCACCGTCCCCCGACTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: GLVHSIHTALTTHLH*KLQRTHSPTVPRLR Trigger: TCGAAGTCGGGGGACGGTGGGACTGTGTGTGCGTTGGAGTTTGCAGTGCAGATGAGTTGTCAGAGCTGTGTGGATGCTGTGCACAAGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000037246.7 ENSMUST00000235245.2 ENSMUST00000236178.2 ENSMUST00000236451.2 ENSMUST00000236567.2 |
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| CDS GCA 90 bp | CCCAGATTCTGTAATTGGCTACTGCCCATACCCTTGAGTACAGCCTaGCTCCCTGTGCTTTCCAGGAGTGCTTGTACCTCCTGGCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PRFCNWLLPIPLSTA*LPVLSRSACTSWLG Trigger: GCCCAGCCAGGAGGTACAAGCACTCCTGGAAAGCACAGGGAGGCAGGCTGTACTCAAGGGTATGGGCAGTAGCCAATTACAGAATCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037246.7 |
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| CDS CCA 90 bp | ACTGATGCACATGGAGTCCATGCAGCCCAGGCTCTAGGCCGTCGATaGTTCCCTCAATCAAGCAGAGTTCAGAGGATAGCTCCTGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TDAHGVHAAQALGRR*FPQSSRVQRIAPGW Trigger: CCAGCCAGGAGCTATCCTCTGAACTCTGCTTGATTGAGGGAACCATCGACGGCCTAGAGCCTGGGCTGCATGGACTCCATGTGCATCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236178.2 |
||
| CDS-3UTR CAA 90 bp | CTACAGCACTTATCTGCCCTGTACTTAGGCCTGTACAAGCAAGGGCCCGCAGCTTGGTCCCCACAGCTATaGCAGTCCCTCGTAAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LQHLSALYLGLYKQGPAAWSPQL*QSLVRS Trigger: GGACCTTACGAGGGACTGCAATAGCTGTGGGGACCA...AGCTGCGGGCCCTTGCTTGTACAGGCCTAAGTACAGGGCAGATAAGTGCTGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037246.7 ENSMUST00000236178.2 ENSMUST00000236451.2 |
||
| CDS-3UTR CAA 90 bp | GGCCCGCAGCTCCCTCTGCAAGAAGATGTTCAGCTACGAGGACCAAATAACCTGTGGTCCCCACAGCTATaGCAGTCCCTCGTAAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GPQLPLQEDVQLRGPNNLWSPQL*QSLVRS Trigger: GGACCTTACGAGGGACTGCAATAGCTGTGGGGACCA...CAGGTTATTTGGTCCTCGTAGCTGAACATCTTCTTGCAGAGGGAGCTGCGGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037246.7 ENSMUST00000235245.2 ENSMUST00000236178.2 ENSMUST00000236451.2 |
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| CDS-3UTR CAA 90 bp | TTAGGCCTGTACAAGCAAGGGCCCGCAGCTCCCTCTGCAAGAAGATGTTCAGCTTGGTCCCCACAGCTATaGCAGTCCCTCGTAAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LGLYKQGPAAPSARRCSAWSPQL*QSLVRS Trigger: GGACCTTACGAGGGACTGCAATAGCTGTGGGGACCA...AGCTGAACATCTTCTTGCAGAGGGAGCTGCGGGCCCTTGCTTGTACAGGCCTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037246.7 ENSMUST00000235245.2 ENSMUST00000236178.2 ENSMUST00000236451.2 |
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| CDS TCA 90 bp | CCTGCCACCCCTTTCAGGGTCTTGTGCACAGCATCCACACAGCTCTaGCAACTCATCTGCACTGCAAACTCCAACGCACACACAGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: PATPFRVLCTASTQL*QLICTANSNAHTVP Trigger: TGGGACTGTGTGTGCGTTGGAGTTTGCAGTGCAGATGAGTTGTCAGAGCTGTGTGGATGCTGTGCACAAGACCCTGAAAGGGGTGGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037246.7 ENSMUST00000236178.2 ENSMUST00000236451.2 ENSMUST00000236567.2 ENSMUST00000238136.2 |
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| CDS-3UTR CAA 90 bp | CCGCAGCTCCCTCTGCAAGAAGATGTTCAGCTACGAGGACCAAATAACCTGACAGCTTTCCAGGAGTGCTaGTACCTCCTGGCTGGGCAG | + |
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Preference number: 5 (lower is better) Translates to: PQLPLQEDVQLRGPNNLTAFQEC*YLLAGQ Trigger: CTGCCCAGCCAGGAGGTACAAGCACTCCTGGAAAGC...TGTCAGGTTATTTGGTCCTCGTAGCTGAACATCTTCTTGCAGAGGGAGCTGCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037246.7 ENSMUST00000236451.2 ENSMUST00000236567.2 |
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| CDS-3UTR CAA 90 bp | TTCAGGCTACAGCACTTATCTGCCCTGTACTTAGGCCTGTACAAGCAAGGGCCCTGGTCCCCACAGCTATaGCAGTCCCTCGTAAGGTCC | + |
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Preference number: 5 (lower is better) Translates to: FRLQHLSALYLGLYKQGPWSPQL*QSLVRS Trigger: GGACCTTACGAGGGACTGCAATAGCTGTGGGGACCA...GGGCCCTTGCTTGTACAGGCCTAAGTACAGGGCAGATAAGTGCTGTAGCCTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037246.7 ENSMUST00000236178.2 ENSMUST00000236451.2 |
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| CDS-3UTR CAA 90 bp | AGGCCTGTACAAGCAAGGGCCCGCAGCTCCCTCTGCAAGAAGATGTTCAGCTACGAATTCCCTGTGATCTaGGATAAGGGATGGCCTCCC | + |
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Preference number: 5 (lower is better) Translates to: RPVQARARSSLCKKMFSYEFPVI*DKGWPP Trigger: GGGAGGCCATCCCTTATCCAAGATCACAGGGAATTC...GTAGCTGAACATCTTCTTGCAGAGGGAGCTGCGGGCCCTTGCTTGTACAGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037246.7 ENSMUST00000235245.2 ENSMUST00000236178.2 ENSMUST00000236451.2 |
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| CDS-3UTR CAA 90 bp | GCCTGTACAAGCAAGGGCCCGCAGCTCCCTCTGCAAGAAGATGTTCAGCTACGAGAATTCCCTGTGATCTaGGATAAGGGATGGCCTCCC | + |
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Preference number: 5 (lower is better) Translates to: ACTSKGPQLPLQEDVQLREFPVI*DKGWPP Trigger: GGGAGGCCATCCCTTATCCAAGATCACAGGGAATTC...TCGTAGCTGAACATCTTCTTGCAGAGGGAGCTGCGGGCCCTTGCTTGTACAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037246.7 ENSMUST00000235245.2 ENSMUST00000236178.2 ENSMUST00000236451.2 |
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| CDS-3UTR CAA 90 bp | CTTAGGCCTGTACAAGCAAGGGCCCGCAGCTCCCTCTGCAAGAAGATGTTCAGCGAATTCCCTGTGATCTaGGATAAGGGATGGCCTCCC | + |
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Preference number: 5 (lower is better) Translates to: LRPVQARARSSLCKKMFSEFPVI*DKGWPP Trigger: GGGAGGCCATCCCTTATCCAAGATCACAGGGAATTC...GCTGAACATCTTCTTGCAGAGGGAGCTGCGGGCCCTTGCTTGTACAGGCCTAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037246.7 ENSMUST00000235245.2 ENSMUST00000236178.2 ENSMUST00000236451.2 |
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| CDS-3UTR CAA 90 bp | TTCAGGCTACAGCACTTATCTGCCCTGTACTTAGGCCTGTACAAGCAAGGGCCCGCTCCCAGATTCTCCTaGAGTACAGCCTGCCTCCCT | + |
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Preference number: 5 (lower is better) Translates to: FRLQHLSALYLGLYKQGPAPRFS*STACLP Trigger: AGGGAGGCAGGCTGTACTCAAGGAGAATCTGGGAGC...GGGCCCTTGCTTGTACAGGCCTAAGTACAGGGCAGATAAGTGCTGTAGCCTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236451.2 |
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| CDS TCA 90 bp | CCACTGCTGCTCCCAGATTCTGTAATTGGCTACTGCCCATACCCTTaGGTACAGCCTGCCTCCCTGTGCTTTCCAGGAGTGCTTGTACCT | + |
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Preference number: 5 (lower is better) Translates to: PLLLPDSVIGYCPYP*VQPASLCFPGVLVP Trigger: AGGTACAAGCACTCCTGGAAAGCACAGGGAGGCAGGCTGTACTCAAGGGTATGGGCAGTAGCCAATTACAGAATCTGGGAGCAGCAGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037246.7 |
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| CDS TCA 90 bp | TCTGCCACCCCTTTCAGGGTCTTGTGCACAGCATCCACACAGCTCTaGCAACTCATCTGCACTGCAAACTCCAACGCACACACAGTCCCA | + |
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Preference number: 5 (lower is better) Translates to: SATPFRVLCTASTQL*QLICTANSNAHTVP Trigger: TGGGACTGTGTGTGCGTTGGAGTTTGCAGTGCAGATGAGTTGTCAGAGCTGTGTGGATGCTGTGCACAAGACCCTGAAAGGGGTGGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235245.2 |
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| CDS TCA 90 bp | GGGTTAAAATGGTCCCCACAGGTAATTGGCTACTGCCCATACCCTTaGGTACAGCCTGCCTCCCTGTGCTTTCCAGGAGTGCTTGTACCT | + |
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Preference number: 5 (lower is better) Translates to: GLKWSPQVIGYCPYP*VQPASLCFPGVLVP Trigger: AGGTACAAGCACTCCTGGAAAGCACAGGGAGGCAGGCTGTACTCAAGGGTATGGGCAGTAGCCAATTACCTGTGGGGACCATTTTAACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236567.2 |
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| CDS-3UTR CAA 90 bp | TTCAGGCTACAGCACTTATCTGCCCTGTACTTAGGCCTGTACAAGCAAGGGCCCGAATTCCCTGTGATCTaGGATAAGGGATGGCCTCCC | + |
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Preference number: 5 (lower is better) Translates to: FRLQHLSALYLGLYKQGPEFPVI*DKGWPP Trigger: GGGAGGCCATCCCTTATCCAAGATCACAGGGAATTC...GGGCCCTTGCTTGTACAGGCCTAAGTACAGGGCAGATAAGTGCTGTAGCCTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037246.7 ENSMUST00000236178.2 ENSMUST00000236451.2 |
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| CDS GCA 72 bp | CCCCTGTATGGAGCCACAGCCCTCCAGAATGGCCACTaGTGCTCCCAGATTCTCTCCTGGCTGGGCAGAGTC | + |
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Preference number: 6 (lower is better) Translates to: PLYGATALQNGH*CSQILSWLGRV Trigger: GACTCTGCCCAGCCAGGAGAGAATCTGGGAGCAGCAGTGGCCATTCTGGAGGGCTGTGGCTCCATACAGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238136.2 |
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| CDS GCA 72 bp | CCCCTGTATGGAGCCACAGCCCTCCAGAATGGCCACTaGTGCTCCCAGATTCTCTGCCACCCCTTTCAGGGT | + |
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Preference number: 6 (lower is better) Translates to: PLYGATALQNGH*CSQILCHPFQG Trigger: ACCCTGAAAGGGGTGGCAGAGAATCTGGGAGCAGCAGTGGCCATTCTGGAGGGCTGTGGCTCCATACAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235245.2 |
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| CDS GCA 72 bp | CCCCTGTATGGAGCCACAGCCCTCCAGAATGGCCACTaGTGCTCCCAGATTCTCCTTGAGTACAGCCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: PLYGATALQNGH*CSQILLEYSLP Trigger: AGGCAGGCTGTACTCAAGGAGAATCTGGGAGCAGCAGTGGCCATTCTGGAGGGCTGTGGCTCCATACAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236451.2 |
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| CDS CCA 72 bp | TGCCTCCCTGTGCTTTCCAGGAGTGCTTGTACCTCCTaGCTGGGCAGAGTCGTCTGCACCAACACCATCTGG | + |
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Preference number: 6 (lower is better) Translates to: CLPVLSRSACTS*LGRVVCTNTIW Trigger: CCAGATGGTGTTGGTGCAGACGACTCTGCCCAGCCAGGAGGTACAAGCACTCCTGGAAAGCACAGGGAGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037246.7 ENSMUST00000236451.2 ENSMUST00000236567.2 |
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| CDS CCA 72 bp | CTCCAGAATGGCCACTGCTGCTCCCAGATTCTCTCCTaGCTGGGCAGAGTCGTCTGCACCAACACCATCTGG | + |
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Preference number: 6 (lower is better) Translates to: LQNGHCCSQILS*LGRVVCTNTIW Trigger: CCAGATGGTGTTGGTGCAGACGACTCTGCCCAGCCAGGAGAGAATCTGGGAGCAGCAGTGGCCATTCTGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238136.2 |
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| CDS GCA 72 bp | GCCACTGCTGCTCCCAGATTCTCCTTGAGTACAGCCTaGCTCCCTGTGCTTTCCAGGAGTGCTTGTACCTCC | + |
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Preference number: 6 (lower is better) Translates to: ATAAPRFSLSTA*LPVLSRSACTS Trigger: GGAGGTACAAGCACTCCTGGAAAGCACAGGGAGGCAGGCTGTACTCAAGGAGAATCTGGGAGCAGCAGTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236451.2 |
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| CDS GCA 72 bp | CACAGCATCCACACAGCTCTGACAACTCATCTGCACTaGAAACTCCAACGCACACACAGTCCCACCGTCCCC | + |
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Preference number: 6 (lower is better) Translates to: HSIHTALTTHLH*KLQRTHSPTVP Trigger: GGGGACGGTGGGACTGTGTGTGCGTTGGAGTTTGCAGTGCAGATGAGTTGTCAGAGCTGTGTGGATGCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000037246.7 ENSMUST00000235245.2 ENSMUST00000236178.2 ENSMUST00000236451.2 ENSMUST00000236567.2 |
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| CDS CCA 72 bp | TCCCTGTGCTTTCCAGGAGTGCTTGTACCTCCTGGCTaGGCAGAGTCGTCTGCACCAACACCATCTGGTTCT | + |
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Preference number: 6 (lower is better) Translates to: SLCFPGVLVPPG*AESSAPTPSGS Trigger: AGAACCAGATGGTGTTGGTGCAGACGACTCTGCCCAGCCAGGAGGTACAAGCACTCCTGGAAAGCACAGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037246.7 ENSMUST00000236451.2 ENSMUST00000236567.2 |
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| CDS GCA 72 bp | CTGGTTCTCCAACTGAACGTCCACATTCTGGACACCTaGCACCCCTTTCAGGGTCTTGTGCACAGCATCCAC | + |
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Preference number: 6 (lower is better) Translates to: LVLQLNVHILDT*HPFQGLVHSIH Trigger: GTGGATGCTGTGCACAAGACCCTGAAAGGGGTGGCAGGTGTCCAGAATGTGGACGTTCAGTTGGAGAACCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037246.7 ENSMUST00000236178.2 ENSMUST00000236451.2 ENSMUST00000236567.2 ENSMUST00000238136.2 |
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| CDS GCA 72 bp | CACAGCATCCACACAGCTCTGACAACTCATCTGCACTaGAAACTCCAACGCACACACAGTCCCACCGTCCCN | + |
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Preference number: 6 (lower is better) Translates to: HSIHTALTTHLH*KLQRTHSPTVP Trigger: NGGGACGGTGGGACTGTGTGTGCGTTGGAGTTTGCAGTGCAGATGAGTTGTCAGAGCTGTGTGGATGCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238136.2 |
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| CDS TCA 72 bp | AGAGTCGTCTGCACCAACACCATCTGGTTCTCCAACTaGACGTCCACATTCTGGACACCTGCCACCCCTTTC | + |
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Preference number: 6 (lower is better) Translates to: RVVCTNTIWFSN*TSTFWTPATPF Trigger: GAAAGGGGTGGCAGGTGTCCAGAATGTGGACGTTCAGTTGGAGAACCAGATGGTGTTGGTGCAGACGACTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037246.7 ENSMUST00000236178.2 ENSMUST00000236451.2 ENSMUST00000236567.2 ENSMUST00000238136.2 |
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| CDS TCA 72 bp | CCTTTCAGGGTCTTGTGCACAGCATCCACACAGCTCTaGCAACTCATCTGCACTGCAAACTCCAACGCACAC | + |
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Preference number: 6 (lower is better) Translates to: PFRVLCTASTQL*QLICTANSNAH Trigger: GTGTGCGTTGGAGTTTGCAGTGCAGATGAGTTGTCAGAGCTGTGTGGATGCTGTGCACAAGACCCTGAAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000037246.7 ENSMUST00000235245.2 ENSMUST00000236178.2 ENSMUST00000236451.2 ENSMUST00000236567.2 ENSMUST00000238136.2 |
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