Pregenerated sensors for CCR9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029530Ensembl transcript IDs: ENSMUST00000111454.4, ENSMUST00000163559.8, ENSMUST00000166236.9, ENSMUST00000168910.2, ENSMUST00000180093.2
Found 278 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAAAGGGGAGGTAGCAGGGAGCCTCAGAAGGAAAGGCCATGTCACTaGCAAAGAGATGGGAGAACCTGCAGCAAGTGCCTCTTGCCTGAG | + |
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Preference number: 1 (lower is better) Translates to: ERGGSREPQKERPCH*QRDGRTCSKCLLPE Trigger: CTCAGGCAAGAGGCACTTGCTGCAGGTTCTCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCTGAGGCTCCCTGCTACCTCCCCTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| 3UTR GCA 90 bp | GAAAGGCCATGTCACTGGCAAAGAGATGGGAGAACCTGCAGCAAGTaGCTCTTGCCTGAGGAAGTCCCAAAGGCTAGGTTCCCACCATCC | + |
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Preference number: 1 (lower is better) Translates to: ERPCHWQRDGRTCSK*LLPEEVPKARFPPS Trigger: GGATGGTGGGAACCTAGCCTTTGGGACTTCCTCAGGCAAGAGGCACTTGCTGCAGGTTCTCCCATCTCTTTGCCAGTGACATGGCCTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| 3UTR CCA 90 bp | GTGTGTCTGGTTCCCATGGAAGCCAGAAGAGGGTGCTGGATCCCTTaGAACTTGAGTTACAGACAGCTGCAACCACCATATGGGTGCTGG | + |
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Preference number: 1 (lower is better) Translates to: VCLVPMEARRGCWIP*NLSYRQLQPPYGCW Trigger: CCAGCACCCATATGGTGGTTGCAGCTGTCTGTAACTCAAGTTCCAAGGGATCCAGCACCCTCTTCTGGCTTCCATGGGAACCAGACACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
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| 3UTR GCA 90 bp | CATGTCACTGGCAAAGAGATGGGAGAACCTGCAGCAAGTGCCTCTTaGCTGAGGAAGTCCCAAAGGCTAGGTTCCCACCATCCAAACATA | + |
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Preference number: 1 (lower is better) Translates to: HVTGKEMGEPAASAS*LRKSQRLGSHHPNI Trigger: TATGTTTGGATGGTGGGAACCTAGCCTTTGGGACTTCCTCAGGCAAGAGGCACTTGCTGCAGGTTCTCCCATCTCTTTGCCAGTGACATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| 3UTR GCA 90 bp | AAGGCTGGGCTGTCTTTGCTGCTGCTCAAGCATCCTCCTCAGAACTaGAGTTACTATAACCAAAAACCAACTGCTGCGCTTCTGGAGTGC | + |
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Preference number: 1 (lower is better) Translates to: KAGLSLLLLKHPPQN*SYYNQKPTAALLEC Trigger: GCACTCCAGAAGCGCAGCAGTTGGTTTTTGGTTATAGTAACTGCAGTTCTGAGGAGGATGCTTGAGCAGCAGCAAAGACAGCCCAGCCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| 3UTR GCA 90 bp | TGTGTACTAGATGTGTGTCTGGTTCCCATGGAAGCCAGAAGAGGGTaGTGGATCCCTTGGAACTTGAGTTACAGACAGCTGCAACCACCA | + |
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Preference number: 1 (lower is better) Translates to: CVLDVCLVPMEARRG*WIPWNLSYRQLQPP Trigger: TGGTGGTTGCAGCTGTCTGTAACTCAAGTTCCAAGGGATCCAGCACCCTCTTCTGGCTTCCATGGGAACCAGACACACATCTAGTACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
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| 3UTR CCA 90 bp | GTACTAGATGTGTGTCTGGTTCCCATGGAAGCCAGAAGAGGGTGCTaGATCCCTTGGAACTTGAGTTACAGACAGCTGCAACCACCATAT | + |
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Preference number: 1 (lower is better) Translates to: VLDVCLVPMEARRGC*IPWNLSYRQLQPPY Trigger: ATATGGTGGTTGCAGCTGTCTGTAACTCAAGTTCCAAGGGATCCAGCACCCTCTTCTGGCTTCCATGGGAACCAGACACACATCTAGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
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| 3UTR CCA 90 bp | GTGCTATGTGATCTATCTCTTTTACAAAGCCTTCTGGTGTCTTGGTaGAGACTTTTAAGCCACGCTGCCTCAGGACCGACTGTAAGGCGG | + |
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Preference number: 1 (lower is better) Translates to: VLCDLSLLQSLLVSW*RLLSHAASGPTVRR Trigger: CCGCCTTACAGTCGGTCCTGAGGCAGCGTGGCTTAAAAGTCTCCACCAAGACACCAGAAGGCTTTGTAAAAGAGATAGATCACATAGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166236.9 |
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| 3UTR TCA 90 bp | GAGGGGATAGTTAAGGACCCTGAGCACGCAAACCACGGTGCTATGTaGTCTATCTCTTTTACAAAGCCTTCTGGTGTCTTGGTGGAGACT | + |
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Preference number: 1 (lower is better) Translates to: EGIVKDPEHANHGAM*SISFTKPSGVLVET Trigger: AGTCTCCACCAAGACACCAGAAGGCTTTGTAAAAGAGATAGATCACATAGCACCGTGGTTTGCGTGCTCAGGGTCCTTAACTATCCCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166236.9 |
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| 3UTR CCA 90 bp | ACGGTGCTATGTGATCTATCTCTTTTACAAAGCCTTCTGGTGTCTTaGTGGAGACTTTTAAGCCACGCTGCCTCAGGACCGACTGTAAGG | + |
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Preference number: 1 (lower is better) Translates to: TVLCDLSLLQSLLVS*WRLLSHAASGPTVR Trigger: CCTTACAGTCGGTCCTGAGGCAGCGTGGCTTAAAAGTCTCCACCAAGACACCAGAAGGCTTTGTAAAAGAGATAGATCACATAGCACCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166236.9 |
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| 3UTR GCA 90 bp | ATATGGGTGCTGGGAGTTGAACCTGGAGCATCTGAAAGGGCTCTCTaGTCCTTTACCTTAATTTTTGAAACAGGTTCTCTCACTGAATCC | + |
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Preference number: 1 (lower is better) Translates to: IWVLGVEPGASERAL*SFTLIFETGSLTES Trigger: GGATTCAGTGAGAGAACCTGTTTCAAAAATTAAGGTAAAGGAGCAGAGAGCCCTTTCAGATGCTCCAGGTTCAACTCCCAGCACCCATAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
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| 3UTR CCA 90 bp | GACAGTTTTGAGCTGCCATGTAGGTGTTGGGAATTGAACCCTGGTTaGGAATTAACCACTGAGCCATCTCTCCAACCCTTTGGATTTTTA | + |
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Preference number: 1 (lower is better) Translates to: DSFELPCRCWELNPG*ELTTEPSLQPFGFL Trigger: TAAAAATCCAAAGGGTTGGAGAGATGGCTCAGTGGTTAATTCCCAACCAGGGTTCAATTCCCAACACCTACATGGCAGCTCAAAACTGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| 3UTR TCA 90 bp | TGTAATGCAATGCTGTGGCTGTGTAGGTCTTTGTTGGGATCTGAATaGGAATGGCCCTCACAGGGTCATATATTTAAATGCTTGGTCTGC | + |
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Preference number: 1 (lower is better) Translates to: CNAMLWLCRSLLGSE*EWPSQGHIFKCLVC Trigger: GCAGACCAAGCATTTAAATATATGACCCTGTGAGGGCCATTCTCATTCAGATCCCAACAAAGACCTACACAGCCACAGCATTGCATTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
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| 3UTR CAA 90 bp | CTGGTTCCCATGGAAGCCAGAAGAGGGTGCTGGATCCCTTGGAACTaGAGTTACAGACAGCTGCAACCACCATATGGGTGCTGGGAGTTG | + |
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Preference number: 2 (lower is better) Translates to: LVPMEARRGCWIPWN*SYRQLQPPYGCWEL Trigger: CAACTCCCAGCACCCATATGGTGGTTGCAGCTGTCTGTAACTCAAGTTCCAAGGGATCCAGCACCCTCTTCTGGCTTCCATGGGAACCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
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| 3UTR-3UTR GCA 90 bp | CTCTGCCTCCAAAACCCAGCTGCACTGATGATCAGCATGTGCAAGGCTGGGCTGCCAAAAACCAACTGCTaGGCTTCTGGAGTGCTCAGT | + |
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Preference number: 2 (lower is better) Translates to: LCLQNPAALMISMCKAGLPKTNC*ASGVLS Trigger: ACTGAGCACTCCAGAAGCGCAGCAGTTGGTTTTTGG...CAGCCCAGCCTTGCACATGCTGATCATCAGTGCAGCTGGGTTTTGGAGGCAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| 3UTR-3UTR GCA 90 bp | GAGGTAGCAGGGAGCCTCAGAAGGAAAGGCCATGTCACTGGCAAAGAGATGGGAGGCTGTCTTTGCTGCTaGTCAAGCATCCTCCTCAGA | + |
|
Preference number: 2 (lower is better) Translates to: EVAGSLRRKGHVTGKEMGGCLCC*SSILLR Trigger: TCTGAGGAGGATGCTTGAGCAGCAGCAAAGACAGCC...TCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCTGAGGCTCCCTGCTACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| 3UTR-3UTR CCA 90 bp | AGAAGGAAAGGCCATGTCACTGGCAAAGAGATGGGAGAACCTGCAGCAAGTGCCCAGCATGTGCAAGGCTaGGCTGTCTTTGCTGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: RRKGHVTGKEMGEPAASAQHVQG*AVFAAA Trigger: AGCAGCAGCAAAGACAGCCCAGCCTTGCACATGCTG...GGCACTTGCTGCAGGTTCTCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| 3UTR CAA 90 bp | CCATGTCACTGGCAAAGAGATGGGAGAACCTGCAGCAAGTGCCTCTaGCCTGAGGAAGTCCCAAAGGCTAGGTTCCCACCATCCAAACAT | + |
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Preference number: 2 (lower is better) Translates to: PCHWQRDGRTCSKCL*PEEVPKARFPPSKH Trigger: ATGTTTGGATGGTGGGAACCTAGCCTTTGGGACTTCCTCAGGCAAGAGGCACTTGCTGCAGGTTCTCCCATCTCTTTGCCAGTGACATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| 3UTR CAA 90 bp | TGTGTGTCTGGTTCCCATGGAAGCCAGAAGAGGGTGCTGGATCCCTaGGAACTTGAGTTACAGACAGCTGCAACCACCATATGGGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: CVSGSHGSQKRVLDP*ELELQTAATTIWVL Trigger: CAGCACCCATATGGTGGTTGCAGCTGTCTGTAACTCAAGTTCCAAGGGATCCAGCACCCTCTTCTGGCTTCCATGGGAACCAGACACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGGAGCCTCAGAAGGAAAGGCCATGTCACTGGCAAAGAGATGGGAGAACCTGCCAAAAACCAACTGCTaGGCTTCTGGAGTGCTCAGT | + |
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Preference number: 2 (lower is better) Translates to: QGASEGKAMSLAKRWENLPKTNC*ASGVLS Trigger: ACTGAGCACTCCAGAAGCGCAGCAGTTGGTTTTTGG...CAGGTTCTCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCTGAGGCTCCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGGAGCCTCAGAAGGAAAGGCCATGTCACTGGCAAAGAGATGGGAGAACCTGCTGATGATCAGCATGTaGAAGGCTGGGCTGTCTTTG | + |
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Preference number: 2 (lower is better) Translates to: QGASEGKAMSLAKRWENLLMISM*KAGLSL Trigger: CAAAGACAGCCCAGCCTTGCACATGCTGATCATCAG...CAGGTTCTCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCTGAGGCTCCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGTAGCAGGGAGCCTCAGAAGGAAAGGCCATGTCACTGGCAAAGAGATGGGATGCCTGACACAGAAGTaGATTGGGAGCAAGACTCCA | + |
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Preference number: 2 (lower is better) Translates to: EVAGSLRRKGHVTGKEMGCLTQK*IGSKTP Trigger: TGGAGTCTTGCTCCCAATCCACTTCTGTGTCAGGCA...TCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCTGAGGCTCCCTGCTACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| 3UTR-3UTR GCA 90 bp | GAGGTAGCAGGGAGCCTCAGAAGGAAAGGCCATGTCACTGGCAAAGAGATGGGAGCTGCGCTTCTGGAGTaGTCAGTTTTGGAAACTTTG | + |
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Preference number: 2 (lower is better) Translates to: EVAGSLRRKGHVTGKEMGAALLE*SVLETL Trigger: CAAAGTTTCCAAAACTGAGCACTCCAGAAGCGCAGC...TCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCTGAGGCTCCCTGCTACCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| 3UTR-3UTR CCA 90 bp | GAAACCCACACCAGGCCCAGTCTCACTCTACTGCATATCTGTGGATCAAGCATACAGCATGTGCAAGGCTaGGCTGTCTTTGCTGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: ETHTRPSLTLLHICGSSIQHVQG*AVFAAA Trigger: AGCAGCAGCAAAGACAGCCCAGCCTTGCACATGCTG...TATGCTTGATCCACAGATATGCAGTAGAGTGAGACTGGGCCTGGTGTGGGTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGTAGCAGGGAGCCTCAGAAGGAAAGGCCATGTCACTGGCAAAGAGATGGGAGACAGTGGTTCTCCCTaGCTCAAGAGAGATCAAAGA | + |
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Preference number: 2 (lower is better) Translates to: EVAGSLRRKGHVTGKEMGDSGSP*LKRDQR Trigger: TCTTTGATCTCTCTTGAGCCAGGGAGAACCACTGTC...TCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCTGAGGCTCCCTGCTACCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGGAGCCTCAGAAGGAAAGGCCATGTCACTGGCAAAGAGATGGGAGAACCTGTGGTCAGCTGTACATTaGCTGACTAACCTGTCTGAC | + |
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Preference number: 2 (lower is better) Translates to: QGASEGKAMSLAKRWENLWSAVH*LTNLSD Trigger: GTCAGACAGGTTAGTCAGCCAATGTACAGCTGACCA...CAGGTTCTCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCTGAGGCTCCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| 3UTR-3UTR CCA 90 bp | AGAAGGAAAGGCCATGTCACTGGCAAAGAGATGGGAGAACCTGCAGCAAGTGCCTGCCTGACACAGAAGTaGATTGGGAGCAAGACTCCA | + |
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Preference number: 2 (lower is better) Translates to: RRKGHVTGKEMGEPAASACLTQK*IGSKTP Trigger: TGGAGTCTTGCTCCCAATCCACTTCTGTGTCAGGCA...GGCACTTGCTGCAGGTTCTCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| 3UTR CAA 90 bp | AACCCAGCTGCACTGATGATCAGCATGTGCAAGGCTGGGCTGTCTTaGCTGCTGCTCAAGCATCCTCCTCAGAACTGCAGTTACTATAAC | + |
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Preference number: 2 (lower is better) Translates to: NPAALMISMCKAGLS*LLLKHPPQNCSYYN Trigger: GTTATAGTAACTGCAGTTCTGAGGAGGATGCTTGAGCAGCAGCAAAGACAGCCCAGCCTTGCACATGCTGATCATCAGTGCAGCTGGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| 3UTR-3UTR TCA 90 bp | AGAAGGAAAGGCCATGTCACTGGCAAAGAGATGGGAGAACCTGCAGCAAGTGCCATGGTATCTTCTGCCTaGCACAGAAGTGGATTGGGA | + |
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Preference number: 2 (lower is better) Translates to: RRKGHVTGKEMGEPAASAMVSSA*HRSGLG Trigger: TCCCAATCCACTTCTGTGTCAGGCAGAAGATACCAT...GGCACTTGCTGCAGGTTCTCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| 3UTR-3UTR GCA 90 bp | GAAACCCACACCAGGCCCAGTCTCACTCTACTGCATATCTGTGGATCAAGCATAGGCTGTCTTTGCTGCTaGTCAAGCATCCTCCTCAGA | + |
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Preference number: 2 (lower is better) Translates to: ETHTRPSLTLLHICGSSIGCLCC*SSILLR Trigger: TCTGAGGAGGATGCTTGAGCAGCAGCAAAGACAGCC...TATGCTTGATCCACAGATATGCAGTAGAGTGAGACTGGGCCTGGTGTGGGTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
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| 3UTR-3UTR GCA 90 bp | GAGGTAGCAGGGAGCCTCAGAAGGAAAGGCCATGTCACTGGCAAAGAGATGGGATCCTTTCCTAGTTTGTaGTTGCAGCTAGGTTTGGAC | + |
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Preference number: 2 (lower is better) Translates to: EVAGSLRRKGHVTGKEMGSFPSL*LQLGLD Trigger: GTCCAAACCTAGCTGCAAGCACAAACTAGGAAAGGA...TCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCTGAGGCTCCCTGCTACCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| 3UTR-3UTR GCA 90 bp | GCAACCACCATATGGGTGCTGGGAGTTGAACCTGGAGCATCTGAAAGGGCTCTCTCCTTTCCTAGTTTGTaGTTGCAGCTAGGTTTGGAC | + |
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Preference number: 2 (lower is better) Translates to: ATTIWVLGVEPGASERALSFPSL*LQLGLD Trigger: GTCCAAACCTAGCTGCAAGCACAAACTAGGAAAGGA...GAGAGCCCTTTCAGATGCTCCAGGTTCAACTCCCAGCACCCATATGGTGGTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
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| 3UTR-3UTR GCA 90 bp | GCCCAGTCTCACTCTACTGCATATCTGTGGATCAAGCATAAGCTCTCAGCGCCAAGATCATTCTGCCTCTaGCTCCCAAGTGCTGGGATT | + |
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Preference number: 2 (lower is better) Translates to: AQSHSTAYLWIKHKLSAPRSFCL*LPSAGI Trigger: AATCCCAGCACTTGGGAGGCAGAGGCAGAATGATCT...TGGCGCTGAGAGCTTATGCTTGATCCACAGATATGCAGTAGAGTGAGACTGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCACTCTACTGCATATCTGTGGATCAAGCATAAGCTCTCAGCGCCATCCTTGCAGCATGTGCAAGGCTaGGCTGTCTTTGCTGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: SHSTAYLWIKHKLSAPSLQHVQG*AVFAAA Trigger: AGCAGCAGCAAAGACAGCCCAGCCTTGCACATGCTG...CAAGGATGGCGCTGAGAGCTTATGCTTGATCCACAGATATGCAGTAGAGTGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
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| 3UTR-3UTR CCA 90 bp | GCCCAGTCTCACTCTACTGCATATCTGTGGATCAAGCATAAGCTCTCAGCGCCATCACTGGCAAAGAGATaGGAGAACCTGCAGCAAGTG | + |
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Preference number: 2 (lower is better) Translates to: AQSHSTAYLWIKHKLSAPSLAKR*ENLQQV Trigger: CACTTGCTGCAGGTTCTCCCATCTCTTTGCCAGTGA...TGGCGCTGAGAGCTTATGCTTGATCCACAGATATGCAGTAGAGTGAGACTGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
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| 3UTR-3UTR CCA 90 bp | TATGGGTGCTGGGAGTTGAACCTGGAGCATCTGAAAGGGCTCTCTGCTCCTTTACTGCCATGTAGGTGTTaGGAATTGAACCCTGGTTGG | + |
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Preference number: 2 (lower is better) Translates to: YGCWELNLEHLKGLSAPLLPCRC*ELNPGW Trigger: CCAACCAGGGTTCAATTCCCAACACCTACATGGCAG...TAAAGGAGCAGAGAGCCCTTTCAGATGCTCCAGGTTCAACTCCCAGCACCCATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
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| 3UTR-3UTR TCA 90 bp | AGAAGGAAAGGCCATGTCACTGGCAAAGAGATGGGAGAACCTGCAGCAAGTGCCAGAAACTGGGAACACTaGAGAAACTCTGCCTCCAAA | + |
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Preference number: 2 (lower is better) Translates to: RRKGHVTGKEMGEPAASARNWEH*RNSASK Trigger: TTTGGAGGCAGAGTTTCTTCAGTGTTCCCAGTTTCT...GGCACTTGCTGCAGGTTCTCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTCTGGAACTGGAGTTGAAGACAGTTTTGAGCTGCCATGTAGGTGTTGGGAAGGCTGTCTTTGCTGCTaGTCAAGCATCCTCCTCAGA | + |
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Preference number: 2 (lower is better) Translates to: SSGTGVEDSFELPCRCWEGCLCC*SSILLR Trigger: TCTGAGGAGGATGCTTGAGCAGCAGCAAAGACAGCC...TTCCCAACACCTACATGGCAGCTCAAAACTGTCTTCAACTCCAGTTCCAGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| 3UTR-3UTR GCA 90 bp | GGGACAGTGGTTCTCCCTGGCTCAAGAGAGATCAAAGAGATCAATCAGAATGGCCTGATGATCAGCATGTaGAAGGCTGGGCTGTCTTTG | + |
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Preference number: 2 (lower is better) Translates to: GTVVLPGSREIKEINQNGLMISM*KAGLSL Trigger: CAAAGACAGCCCAGCCTTGCACATGCTGATCATCAG...GCCATTCTGATTGATCTCTTTGATCTCTCTTGAGCCAGGGAGAACCACTGTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| 3UTR-3UTR GCA 90 bp | GCAACCACCATATGGGTGCTGGGAGTTGAACCTGGAGCATCTGAAAGGGCTCTCCATTGGTGTTTTGCCTaGTTGTATGTCTGTGTGAGA | + |
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Preference number: 2 (lower is better) Translates to: ATTIWVLGVEPGASERALHWCFA*LYVCVR Trigger: TCTCACACAGACATACAAGCAGGCAAAACACCAATG...GAGAGCCCTTTCAGATGCTCCAGGTTCAACTCCCAGCACCCATATGGTGGTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
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| 3UTR-3UTR GCA 90 bp | GCAACCACCATATGGGTGCTGGGAGTTGAACCTGGAGCATCTGAAAGGGCTCTCTGTGCATTGGTGTTTTaGCTGCTTGTATGTCTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: ATTIWVLGVEPGASERALCALVF*LLVCLC Trigger: ACACAGACATACAAGCAGGCAAAACACCAATGCACA...GAGAGCCCTTTCAGATGCTCCAGGTTCAACTCCCAGCACCCATATGGTGGTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
||
| 3UTR-3UTR GCA 90 bp | GCAACCACCATATGGGTGCTGGGAGTTGAACCTGGAGCATCTGAAAGGGCTCTCGAATGTGTAATGCAATaGTGTGGCTGTGTAGGTCTT | + |
|
Preference number: 2 (lower is better) Translates to: ATTIWVLGVEPGASERALECVMQ*CGCVGL Trigger: AAGACCTACACAGCCACAGCATTGCATTACACATTC...GAGAGCCCTTTCAGATGCTCCAGGTTCAACTCCCAGCACCCATATGGTGGTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
||
| 3UTR CAA 90 bp | ACTGGAGTTGAAGACAGTTTTGAGCTGCCATGTAGGTGTTGGGAATaGAACCCTGGTTGGGAATTAACCACTGAGCCATCTCTCCAACCC | + |
|
Preference number: 2 (lower is better) Translates to: TGVEDSFELPCRCWE*NPGWELTTEPSLQP Trigger: GGGTTGGAGAGATGGCTCAGTGGTTAATTCCCAACCAGGGTTCAATTCCCAACACCTACATGGCAGCTCAAAACTGTCTTCAACTCCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| 3UTR-3UTR GCA 90 bp | TGTTTCAGAAACCCACACCAGGCCCAGTCTCACTCTACTGCATATCTGTGGATCGCTGCGCTTCTGGAGTaGTCAGTTTTGGAAACTTTG | + |
|
Preference number: 2 (lower is better) Translates to: CFRNPHQAQSHSTAYLWIAALLE*SVLETL Trigger: CAAAGTTTCCAAAACTGAGCACTCCAGAAGCGCAGC...GATCCACAGATATGCAGTAGAGTGAGACTGGGCCTGGTGTGGGTTTCTGAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
||
| 3UTR-3UTR GCA 90 bp | TATGGGTGCTGGGAGTTGAACCTGGAGCATCTGAAAGGGCTCTCTGCTCCTTTATCCTTTCCTAGTTTGTaGTTGCAGCTAGGTTTGGAC | + |
|
Preference number: 2 (lower is better) Translates to: YGCWELNLEHLKGLSAPLSFPSL*LQLGLD Trigger: GTCCAAACCTAGCTGCAAGCACAAACTAGGAAAGGA...TAAAGGAGCAGAGAGCCCTTTCAGATGCTCCAGGTTCAACTCCCAGCACCCATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
||
| 3UTR-3UTR CCA 90 bp | TCCTCTGGAACTGGAGTTGAAGACAGTTTTGAGCTGCCATGTAGGTGTTGGGAAGAAAGGCCATGTCACTaGCAAAGAGATGGGAGAACC | + |
|
Preference number: 2 (lower is better) Translates to: SSGTGVEDSFELPCRCWEERPCH*QRDGRT Trigger: GGTTCTCCCATCTCTTTGCCAGTGACATGGCCTTTC...TTCCCAACACCTACATGGCAGCTCAAAACTGTCTTCAACTCCAGTTCCAGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| 3UTR-3UTR TCA 90 bp | GGGACAGTGGTTCTCCCTGGCTCAAGAGAGATCAAAGAGATCAATCAGAATGGCAGAAACTGGGAACACTaGAGAAACTCTGCCTCCAAA | + |
|
Preference number: 2 (lower is better) Translates to: GTVVLPGSREIKEINQNGRNWEH*RNSASK Trigger: TTTGGAGGCAGAGTTTCTTCAGTGTTCCCAGTTTCT...GCCATTCTGATTGATCTCTTTGATCTCTCTTGAGCCAGGGAGAACCACTGTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| 3UTR-3UTR TCA 90 bp | TCCTCTGGAACTGGAGTTGAAGACAGTTTTGAGCTGCCATGTAGGTGTTGGGAATTGGGAATTAACCACTaGGCCATCTCTCCAACCCTT | + |
|
Preference number: 2 (lower is better) Translates to: SSGTGVEDSFELPCRCWELGINH*AISPTL Trigger: AAGGGTTGGAGAGATGGCTCAGTGGTTAATTCCCAA...TTCCCAACACCTACATGGCAGCTCAAAACTGTCTTCAACTCCAGTTCCAGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| 3UTR-3UTR GCA 90 bp | ACAGTGGTTCTCCCTGGCTCAAGAGAGATCAAAGAGATCAATCAGAATGGCATTGGCTGTCTTTGCTGCTaGTCAAGCATCCTCCTCAGA | + |
|
Preference number: 2 (lower is better) Translates to: TVVLPGSREIKEINQNGIGCLCC*SSILLR Trigger: TCTGAGGAGGATGCTTGAGCAGCAGCAAAGACAGCC...AATGCCATTCTGATTGATCTCTTTGATCTCTCTTGAGCCAGGGAGAACCACTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| 3UTR-3UTR GCA 90 bp | TCCTCTGGAACTGGAGTTGAAGACAGTTTTGAGCTGCCATGTAGGTGTTGGGAAAGGTGTACACTACCATaGCCAACCTACCAGTTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: SSGTGVEDSFELPCRCWERCTLP*PTYQFF Trigger: GAAGAACTGGTAGGTTGGGCATGGTAGTGTACACCT...TTCCCAACACCTACATGGCAGCTCAAAACTGTCTTCAACTCCAGTTCCAGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| 3UTR-3UTR CCA 90 bp | TCCTCTGGAACTGGAGTTGAAGACAGTTTTGAGCTGCCATGTAGGTGTTGGGAATGGTCAGCTGTACATTaGCTGACTAACCTGTCTGAC | + |
|
Preference number: 2 (lower is better) Translates to: SSGTGVEDSFELPCRCWEWSAVH*LTNLSD Trigger: GTCAGACAGGTTAGTCAGCCAATGTACAGCTGACCA...TTCCCAACACCTACATGGCAGCTCAAAACTGTCTTCAACTCCAGTTCCAGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTACAAAGCCTGTGTTTCCTGTAGTGTTCCCAAACTCCCCATCACAAACCACAGAAAGGCCATGTCACTaGCAAAGAGATGGGAGAACC | + |
|
Preference number: 2 (lower is better) Translates to: CTKPVFPVVFPNSPSQTTERPCH*QRDGRT Trigger: GGTTCTCCCATCTCTTTGCCAGTGACATGGCCTTTC...TGTGGTTTGTGATGGGGAGTTTGGGAACACTACAGGAAACACAGGCTTTGTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTACAAAGCCTGTGTTTCCTGTAGTGTTCCCAAACTCCCCATCACAAACCACACTGCCATGTAGGTGTTaGGAATTGAACCCTGGTTGG | + |
|
Preference number: 2 (lower is better) Translates to: CTKPVFPVVFPNSPSQTTLPCRC*ELNPGW Trigger: CCAACCAGGGTTCAATTCCCAACACCTACATGGCAG...TGTGGTTTGTGATGGGGAGTTTGGGAACACTACAGGAAACACAGGCTTTGTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
||
| 3UTR-3UTR TCA 90 bp | TCCTCTGGAACTGGAGTTGAAGACAGTTTTGAGCTGCCATGTAGGTGTTGGGAAAGAAACTGGGAACACTaGAGAAACTCTGCCTCCAAA | + |
|
Preference number: 2 (lower is better) Translates to: SSGTGVEDSFELPCRCWERNWEH*RNSASK Trigger: TTTGGAGGCAGAGTTTCTTCAGTGTTCCCAGTTTCT...TTCCCAACACCTACATGGCAGCTCAAAACTGTCTTCAACTCCAGTTCCAGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| 3UTR-3UTR TCA 90 bp | TCTTTATTGCTTACTTCTCAGGAAGACCCCGAACCCAGAAAATGGTGCTGCTTAGAATGTGTAGTGCTGTaGCTGTGTAGGTGTGTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: SLLLTSQEDPEPRKWCCLECVVL*LCRCVL Trigger: CAGCACACACCTACACAGTCACAGCACTACACATTC...TAAGCAGCACCATTTTCTGGGTTCGGGGTCTTCCTGAGAAGTAAGCAATAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166236.9 |
||
| 3UTR-3UTR GCA 90 bp | ACAGTGGTTCTCCCTGGCTCAAGAGAGATCAAAGAGATCAATCAGAATGGCATTCTGATGATCAGCATGTaGAAGGCTGGGCTGTCTTTG | + |
|
Preference number: 2 (lower is better) Translates to: TVVLPGSREIKEINQNGILMISM*KAGLSL Trigger: CAAAGACAGCCCAGCCTTGCACATGCTGATCATCAG...AATGCCATTCTGATTGATCTCTTTGATCTCTCTTGAGCCAGGGAGAACCACTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| 3UTR-3UTR GCA 90 bp | GAAACCCACACCAGGCCCAGTCTCACTCTACTGCATATCTGTGGATCAAGCATATGTGCATTGGTGTTTTaGCTGCTTGTATGTCTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: ETHTRPSLTLLHICGSSICALVF*LLVCLC Trigger: ACACAGACATACAAGCAGGCAAAACACCAATGCACA...TATGCTTGATCCACAGATATGCAGTAGAGTGAGACTGGGCCTGGTGTGGGTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTTTATTGCTTACTTCTCAGGAAGACCCCGAACCCAGAAAATGGTGCTGCTTATCACTGGCAAAGAGATaGGAGAACCTGCAGCAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: SLLLTSQEDPEPRKWCCLSLAKR*ENLQQV Trigger: CACTTGCTGCAGGTTCTCCCATCTCTTTGCCAGTGA...TAAGCAGCACCATTTTCTGGGTTCGGGGTCTTCCTGAGAAGTAAGCAATAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166236.9 |
||
| 3UTR-3UTR CCA 90 bp | TCTTTATTGCTTACTTCTCAGGAAGACCCCGAACCCAGAAAATGGTGCTGCTTAGGATGGGCAGTGACTTaGCACGAATTTACTCCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: SLLLTSQEDPEPRKWCCLGWAVT*HEFTPA Trigger: TGCTGGAGTAAATTCGTGCCAAGTCACTGCCCATCC...TAAGCAGCACCATTTTCTGGGTTCGGGGTCTTCCTGAGAAGTAAGCAATAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166236.9 |
||
| 3UTR-3UTR GCA 90 bp | ACAGTGGTTCTCCCTGGCTCAAGAGAGATCAAAGAGATCAATCAGAATGGCATTGCTGCGCTTCTGGAGTaGTCAGTTTTGGAAACTTTG | + |
|
Preference number: 2 (lower is better) Translates to: TVVLPGSREIKEINQNGIAALLE*SVLETL Trigger: CAAAGTTTCCAAAACTGAGCACTCCAGAAGCGCAGC...AATGCCATTCTGATTGATCTCTTTGATCTCTCTTGAGCCAGGGAGAACCACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| 3UTR-3UTR GCA 90 bp | CTTTCACAACGGCATGATTTTTGCTTTAAGTTTGTTGTTCTCTTGCTCCCCAACAGAACCTGCAGCAAGTaGCTCTTGCCTGAGGAAGTC | + |
|
Preference number: 2 (lower is better) Translates to: LSQRHDFCFKFVVLLLPNRTCSK*LLPEEV Trigger: GACTTCCTCAGGCAAGAGGCACTTGCTGCAGGTTCT...GTTGGGGAGCAAGAGAACAACAAACTTAAAGCAAAAATCATGCCGTTGTGAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166236.9 |
||
| 3UTR-3UTR CCA 90 bp | AGAAGGAAAGGCCATGTCACTGGCAAAGAGATGGGAGAACCTGCAGCAAGTGCCGAAAAGATCCTGAGGTaGTTATCAATAAGCCTTTTT | + |
|
Preference number: 2 (lower is better) Translates to: RRKGHVTGKEMGEPAASAEKILR*LSISLF Trigger: AAAAAGGCTTATTGATAACCACCTCAGGATCTTTTC...GGCACTTGCTGCAGGTTCTCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| 3UTR-3UTR TCA 90 bp | ACAGTGGTTCTCCCTGGCTCAAGAGAGATCAAAGAGATCAATCAGAATGGCATTAGAAACTGGGAACACTaGAGAAACTCTGCCTCCAAA | + |
|
Preference number: 2 (lower is better) Translates to: TVVLPGSREIKEINQNGIRNWEH*RNSASK Trigger: TTTGGAGGCAGAGTTTCTTCAGTGTTCCCAGTTTCT...AATGCCATTCTGATTGATCTCTTTGATCTCTCTTGAGCCAGGGAGAACCACTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| 3UTR-3UTR TCA 90 bp | TCCTCTGGAACTGGAGTTGAAGACAGTTTTGAGCTGCCATGTAGGTGTTGGGAACTTTGGATTTTTACTTaGTTGGTTGGTTGTTGGGGT | + |
|
Preference number: 2 (lower is better) Translates to: SSGTGVEDSFELPCRCWELWIFT*LVGCWG Trigger: ACCCCAACAACCAACCAATCAAGTAAAAATCCAAAG...TTCCCAACACCTACATGGCAGCTCAAAACTGTCTTCAACTCCAGTTCCAGAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| 3UTR-3UTR GCA 90 bp | CTTTCACAACGGCATGATTTTTGCTTTAAGTTTGTTGTTCTCTTGCTCCCCAACAGGTGTACACTACCATaGCCAACCTACCAGTTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: LSQRHDFCFKFVVLLLPNRCTLP*PTYQFF Trigger: GAAGAACTGGTAGGTTGGGCATGGTAGTGTACACCT...GTTGGGGAGCAAGAGAACAACAAACTTAAAGCAAAAATCATGCCGTTGTGAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166236.9 |
||
| 3UTR-3UTR GCA 90 bp | ACCATGCCCAACCTACCAGTTCTTCTTAATCTAAAATTTAAAGGTTGTAAACTGAGAACCTGCAGCAAGTaGCTCTTGCCTGAGGAAGTC | + |
|
Preference number: 2 (lower is better) Translates to: TMPNLPVLLNLKFKGCKLRTCSK*LLPEEV Trigger: GACTTCCTCAGGCAAGAGGCACTTGCTGCAGGTTCT...CAGTTTACAACCTTTAAATTTTAGATTAAGAAGAACTGGTAGGTTGGGCATGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| 3UTR-3UTR GCA 90 bp | ACCATGCCCAACCTACCAGTTCTTCTTAATCTAAAATTTAAAGGTTGTAAACTGAGAGATGGGAGAACCTaGAGCAAGTGCCTCTTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: TMPNLPVLLNLKFKGCKLRDGRT*SKCLLP Trigger: AGGCAAGAGGCACTTGCTGCAGGTTCTCCCATCTCT...CAGTTTACAACCTTTAAATTTTAGATTAAGAAGAACTGGTAGGTTGGGCATGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| 3UTR-3UTR GCA 90 bp | GGTGGGGTAAAGATTTACCAGCCTTACCTTTTACAATTACTGTATTTCTATCTAAGAGATGGGAGAACCTaGAGCAAGTGCCTCTTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: GGVKIYQPYLLQLLYFYLRDGRT*SKCLLP Trigger: AGGCAAGAGGCACTTGCTGCAGGTTCTCCCATCTCT...TAGATAGAAATACAGTAATTGTAAAAGGTAAGGCTGGTAAATCTTTACCCCACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
||
| 3UTR-3UTR CCA 90 bp | ACCATGCCCAACCTACCAGTTCTTCTTAATCTAAAATTTAAAGGTTGTAAACTGTGGGACTACAGAGTATaGAAAGGGGAGGTAGCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: TMPNLPVLLNLKFKGCKLWDYRV*KGEVAG Trigger: CCCTGCTACCTCCCCTTTCCATACTCTGTAGTCCCA...CAGTTTACAACCTTTAAATTTTAGATTAAGAAGAACTGGTAGGTTGGGCATGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| 3UTR-3UTR GCA 90 bp | ACCATGCCCAACCTACCAGTTCTTCTTAATCTAAAATTTAAAGGTTGTAAACTGCTGATGATCAGCATGTaGAAGGCTGGGCTGTCTTTG | + |
|
Preference number: 2 (lower is better) Translates to: TMPNLPVLLNLKFKGCKLLMISM*KAGLSL Trigger: CAAAGACAGCCCAGCCTTGCACATGCTGATCATCAG...CAGTTTACAACCTTTAAATTTTAGATTAAGAAGAACTGGTAGGTTGGGCATGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| 3UTR-3UTR CCA 90 bp | ACCATGCCCAACCTACCAGTTCTTCTTAATCTAAAATTTAAAGGTTGTAAACTGGAAAGGCCATGTCACTaGCAAAGAGATGGGAGAACC | + |
|
Preference number: 2 (lower is better) Translates to: TMPNLPVLLNLKFKGCKLERPCH*QRDGRT Trigger: GGTTCTCCCATCTCTTTGCCAGTGACATGGCCTTTC...CAGTTTACAACCTTTAAATTTTAGATTAAGAAGAACTGGTAGGTTGGGCATGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| 3UTR-3UTR CCA 90 bp | ACCATGCCCAACCTACCAGTTCTTCTTAATCTAAAATTTAAAGGTTGTAAACTGGACAGTGGTTCTCCCTaGCTCAAGAGAGATCAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: TMPNLPVLLNLKFKGCKLDSGSP*LKRDQR Trigger: TCTTTGATCTCTCTTGAGCCAGGGAGAACCACTGTC...CAGTTTACAACCTTTAAATTTTAGATTAAGAAGAACTGGTAGGTTGGGCATGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| 3UTR-3UTR CCA 90 bp | ACCATGCCCAACCTACCAGTTCTTCTTAATCTAAAATTTAAAGGTTGTAAACTGTGGTCAGCTGTACATTaGCTGACTAACCTGTCTGAC | + |
|
Preference number: 2 (lower is better) Translates to: TMPNLPVLLNLKFKGCKLWSAVH*LTNLSD Trigger: GTCAGACAGGTTAGTCAGCCAATGTACAGCTGACCA...CAGTTTACAACCTTTAAATTTTAGATTAAGAAGAACTGGTAGGTTGGGCATGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTTCACAACGGCATGATTTTTGCTTTAAGTTTGTTGTTCTCTTGCTCCCCAACTCTACTGCATATCTGTaGATCAAGCATAAGCTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: LSQRHDFCFKFVVLLLPNSTAYL*IKHKLS Trigger: TGAGAGCTTATGCTTGATCCACAGATATGCAGTAGA...GTTGGGGAGCAAGAGAACAACAAACTTAAAGCAAAAATCATGCCGTTGTGAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166236.9 |
||
| 3UTR CAA 90 bp | CTCTTTCTGCTAAACTACCTGCTGACCTTCCCAGAAATGTTCACTTaGTGTCTTAATATGTATGTGAAAGATGAAGGAAGTCGAAGAGAA | + |
|
Preference number: 2 (lower is better) Translates to: LFLLNYLLTFPEMFT*CLNMYVKDEGSRRE Trigger: TTCTCTTCGACTTCCTTCATCTTTCACATACATATTAAGACACAAAGTGAACATTTCTGGGAAGGTCAGCAGGTAGTTTAGCAGAAAGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
||
| 3UTR-3UTR GCA 90 bp | CTTTCACAACGGCATGATTTTTGCTTTAAGTTTGTTGTTCTCTTGCTCCCCAACATAGCTTATACTTCTTaGTCATTCATCAAGTTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: LSQRHDFCFKFVVLLLPNIAYTS*SFIKFL Trigger: GAGGAACTTGATGAATGAGCAAGAAGTATAAGCTAT...GTTGGGGAGCAAGAGAACAACAAACTTAAAGCAAAAATCATGCCGTTGTGAAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166236.9 |
||
| 3UTR-3UTR CCA 90 bp | GGTGGGGTAAAGATTTACCAGCCTTACCTTTTACAATTACTGTATTTCTATCTAAAGGTTGTAAACTGTTaGGACTACAGAGTATGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: GGVKIYQPYLLQLLYFYLKVVNC*DYRVWK Trigger: TTTCCATACTCTGTAGTCCCAACAGTTTACAACCTT...TAGATAGAAATACAGTAATTGTAAAAGGTAAGGCTGGTAAATCTTTACCCCACC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
||
| 3UTR-3UTR CCA 90 bp | ACCATGCCCAACCTACCAGTTCTTCTTAATCTAAAATTTAAAGGTTGTAAACTGGAAAAGATCCTGAGGTaGTTATCAATAAGCCTTTTT | + |
|
Preference number: 2 (lower is better) Translates to: TMPNLPVLLNLKFKGCKLEKILR*LSISLF Trigger: AAAAAGGCTTATTGATAACCACCTCAGGATCTTTTC...CAGTTTACAACCTTTAAATTTTAGATTAAGAAGAACTGGTAGGTTGGGCATGGT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| 3UTR CCA 72 bp | GGTAGCAGGGAGCCTCAGAAGGAAAGGCCATGTCACTaGCAAAGAGATGGGAGAACCTGCAGCAAGTGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: GSREPQKERPCH*QRDGRTCSKCL Trigger: GAGGCACTTGCTGCAGGTTCTCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCTGAGGCTCCCTGCTACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGGTAGCAGGGAGCCTCAGAAGGAAAGGCCATGTCACTGGCAAAGAGATGGGAAAGGCTGGGCTGTCTTaGCTGCTGCTCAAGCATCCT | + |
|
Preference number: 3 (lower is better) Translates to: EVAGSLRRKGHVTGKEMGKAGLS*LLLKHP Trigger: AGGATGCTTGAGCAGCAGCAAAGACAGCCCAGCCTT...TCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCTGAGGCTCCCTGCTACCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGGGAGCCTCAGAAGGAAAGGCCATGTCACTGGCAAAGAGATGGGAGAACCTGAAGGCTGGGCTGTCTTaGCTGCTGCTCAAGCATCCT | + |
|
Preference number: 3 (lower is better) Translates to: QGASEGKAMSLAKRWENLKAGLS*LLLKHP Trigger: AGGATGCTTGAGCAGCAGCAAAGACAGCCCAGCCTT...CAGGTTCTCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCTGAGGCTCCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| 3UTR GCA 72 bp | GGCAAAGAGATGGGAGAACCTGCAGCAAGTGCCTCTTaGCTGAGGAAGTCCCAAAGGCTAGGTTCCCACCAT | + |
|
Preference number: 3 (lower is better) Translates to: GKEMGEPAASAS*LRKSQRLGSHH Trigger: ATGGTGGGAACCTAGCCTTTGGGACTTCCTCAGGCAAGAGGCACTTGCTGCAGGTTCTCCCATCTCTTTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAAGGAAAGGCCATGTCACTGGCAAAGAGATGGGAGAACCTGCAGCAAGTGCCAAGGCTGGGCTGTCTTaGCTGCTGCTCAAGCATCCT | + |
|
Preference number: 3 (lower is better) Translates to: RRKGHVTGKEMGEPAASAKAGLS*LLLKHP Trigger: AGGATGCTTGAGCAGCAGCAAAGACAGCCCAGCCTT...GGCACTTGCTGCAGGTTCTCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| 3UTR GCA 72 bp | GGGAACACTGAAGAAACTCTGCCTCCAAAACCCAGCTaGACTGATGATCAGCATGTGCAAGGCTGGGCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: GNTEETLPPKPS*TDDQHVQGWAV Trigger: GACAGCCCAGCCTTGCACATGCTGATCATCAGTGCAGCTGGGTTTTGGAGGCAGAGTTTCTTCAGTGTTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| 3UTR GCA 72 bp | TGTCACTGGCAAAGAGATGGGAGAACCTGCAGCAAGTaGCTCTTGCCTGAGGAAGTCCCAAAGGCTAGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: CHWQRDGRTCSK*LLPEEVPKARF Trigger: GAACCTAGCCTTTGGGACTTCCTCAGGCAAGAGGCACTTGCTGCAGGTTCTCCCATCTCTTTGCCAGTGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| 3UTR CCA 72 bp | AAACCCAGCTGCACTGATGATCAGCATGTGCAAGGCTaGGCTGTCTTTGCTGCTGCTCAAGCATCCTCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: KPSCTDDQHVQG*AVFAAAQASSS Trigger: TGAGGAGGATGCTTGAGCAGCAGCAAAGACAGCCCAGCCTTGCACATGCTGATCATCAGTGCAGCTGGGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| 3UTR CCA 72 bp | TCAGCTGTACATTGGCTGACTAACCTGTCTGACAGGTaGCTCCAAACTAGGGACAGTGGTTCTCCCTGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: SAVHWLTNLSDR*LQTRDSGSPWL Trigger: GAGCCAGGGAGAACCACTGTCCCTAGTTTGGAGCCACCTGTCAGACAGGTTAGTCAGCCAATGTACAGCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| 3UTR CCA 72 bp | GTGTGTCTGGTTCCCATGGAAGCCAGAAGAGGGTGCTaGATCCCTTGGAACTTGAGTTACAGACAGCTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: VCLVPMEARRGC*IPWNLSYRQLQ Trigger: TTGCAGCTGTCTGTAACTCAAGTTCCAAGGGATCCAGCACCCTCTTCTGGCTTCCATGGGAACCAGACACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGGTAGCAGGGAGCCTCAGAAGGAAAGGCCATGTCACTGGCAAAGAGATGGGACCCAGATTGTTTGTTTaGTTTTTCCTGCCCTCCACC | + |
|
Preference number: 3 (lower is better) Translates to: EVAGSLRRKGHVTGKEMGPRLFV*FFLPST Trigger: GGTGGAGGGCAGGAAAAACAAAACAAACAATCTGGG...TCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCTGAGGCTCCCTGCTACCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAAGGAAAGGCCATGTCACTGGCAAAGAGATGGGAGAACCTGCAGCAAGTGCCCCCAGATTGTTTGTTTaGTTTTTCCTGCCCTCCACC | + |
|
Preference number: 3 (lower is better) Translates to: RRKGHVTGKEMGEPAASAPRLFV*FFLPST Trigger: GGTGGAGGGCAGGAAAAACAAAACAAACAATCTGGG...GGCACTTGCTGCAGGTTCTCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCTGCCTCCAAAACCCAGCTGCACTGATGATCAGCATGTGCAAGGCTGGGCTGCTGGAGTGCTCAGTTTaGGAAACTTTGGTAGATTCT | + |
|
Preference number: 3 (lower is better) Translates to: LCLQNPAALMISMCKAGLLECSV*ETLVDS Trigger: AGAATCTACCAAAGTTTCCAAAACTGAGCACTCCAG...CAGCCCAGCCTTGCACATGCTGATCATCAGTGCAGCTGGGTTTTGGAGGCAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCCAGTCTCACTCTACTGCATATCTGTGGATCAAGCATAAGCTCTCAGCGCCACCTCTGGAACTGGAGTaGAAGACAGTTTTGAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: AQSHSTAYLWIKHKLSAPPLELE*KTVLSC Trigger: GCAGCTCAAAACTGTCTTCAACTCCAGTTCCAGAGG...TGGCGCTGAGAGCTTATGCTTGATCCACAGATATGCAGTAGAGTGAGACTGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
||
| 3UTR GCA 72 bp | AACTTGAGTTACAGACAGCTGCAACCACCATATGGGTaGTGGGAGTTGAACCTGGAGCATCTGAAAGGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: NLSYRQLQPPYG*WELNLEHLKGL Trigger: GAGCCCTTTCAGATGCTCCAGGTTCAACTCCCAGCACCCATATGGTGGTTGCAGCTGTCTGTAACTCAAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
||
| 3UTR CCA 72 bp | TTGAGTTACAGACAGCTGCAACCACCATATGGGTGCTaGGAGTTGAACCTGGAGCATCTGAAAGGGCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LSYRQLQPPYGC*ELNLEHLKGLS Trigger: AGAGAGCCCTTTCAGATGCTCCAGGTTCAACTCCCAGCACCCATATGGTGGTTGCAGCTGTCTGTAACTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
||
| 3UTR TCA 72 bp | TGCTTGCAGCTAGGTTTGGACATGGTATCTTCTGCCTaGCACAGAAGTGGATTGGGAGCAAGACTCCAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: CLQLGLDMVSSA*HRSGLGARLQV Trigger: TACCTGGAGTCTTGCTCCCAATCCACTTCTGTGTCAGGCAGAAGATACCATGTCCAAACCTAGCTGCAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| 3UTR GCA 72 bp | CACACCAGGGAACAGGCTAGATCCTTTCCTAGTTTGTaGTTGCAGCTAGGTTTGGACATGGTATCTTCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: HTREQARSFPSL*LQLGLDMVSSA Trigger: GGCAGAAGATACCATGTCCAAACCTAGCTGCAAGCACAAACTAGGAAAGGATCTAGCCTGTTCCCTGGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| 3UTR CCA 72 bp | GAGCTGCCATGTAGGTGTTGGGAATTGAACCCTGGTTaGGAATTAACCACTGAGCCATCTCTCCAACCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: ELPCRCWELNPG*ELTTEPSLQPF Trigger: AAAGGGTTGGAGAGATGGCTCAGTGGTTAATTCCCAACCAGGGTTCAATTCCCAACACCTACATGGCAGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| 3UTR CCA 72 bp | TTGGAACTTGAGTTACAGACAGCTGCAACCACCATATaGGTGCTGGGAGTTGAACCTGGAGCATCTGAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: LELELQTAATTI*VLGVEPGASER Trigger: CCTTTCAGATGCTCCAGGTTCAACTCCCAGCACCCATATGGTGGTTGCAGCTGTCTGTAACTCAAGTTCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGACAGTGGTTCTCCCTGGCTCAAGAGAGATCAAAGAGATCAATCAGAATGGCCCCAGATTGTTTGTTTaGTTTTTCCTGCCCTCCACC | + |
|
Preference number: 3 (lower is better) Translates to: GTVVLPGSREIKEINQNGPRLFV*FFLPST Trigger: GGTGGAGGGCAGGAAAAACAAAACAAACAATCTGGG...GCCATTCTGATTGATCTCTTTGATCTCTCTTGAGCCAGGGAGAACCACTGTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| 3UTR GCA 72 bp | AGGCTGATCTTGAACTCACAGAGATCATTCTGCCTCTaGCTCCCAAGTGCTGGGATTAAAGGTGTACACTAC | + |
|
Preference number: 3 (lower is better) Translates to: RLILNSQRSFCL*LPSAGIKGVHY Trigger: GTAGTGTACACCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGAATGATCTCTGTGAGTTCAAGATCAGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| 3UTR CCA 72 bp | AGGTTTGGACATGGTATCTTCTGCCTGACACAGAAGTaGATTGGGAGCAAGACTCCAGGTAATGTGATGTGG | + |
|
Preference number: 3 (lower is better) Translates to: RFGHGIFCLTQK*IGSKTPGNVMW Trigger: CCACATCACATTACCTGGAGTCTTGCTCCCAATCCACTTCTGTGTCAGGCAGAAGATACCATGTCCAAACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| 3UTR CCA 72 bp | GATCTATCTCTTTTACAAAGCCTTCTGGTGTCTTGGTaGAGACTTTTAAGCCACGCTGCCTCAGGACCGACT | + |
|
Preference number: 3 (lower is better) Translates to: DLSLLQSLLVSW*RLLSHAASGPT Trigger: AGTCGGTCCTGAGGCAGCGTGGCTTAAAAGTCTCCACCAAGACACCAGAAGGCTTTGTAAAAGAGATAGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166236.9 |
||
| 3UTR TCA 72 bp | GTTAAGGACCCTGAGCACGCAAACCACGGTGCTATGTaGTCTATCTCTTTTACAAAGCCTTCTGGTGTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: VKDPEHANHGAM*SISFTKPSGVL Trigger: CAAGACACCAGAAGGCTTTGTAAAAGAGATAGATCACATAGCACCGTGGTTTGCGTGCTCAGGGTCCTTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166236.9 |
||
| 3UTR GCA 72 bp | CTGTCTTTGCTGCTGCTCAAGCATCCTCCTCAGAACTaGAGTTACTATAACCAAAAACCAACTGCTGCGCTT | + |
|
Preference number: 3 (lower is better) Translates to: LSLLLLKHPPQN*SYYNQKPTAAL Trigger: AAGCGCAGCAGTTGGTTTTTGGTTATAGTAACTGCAGTTCTGAGGAGGATGCTTGAGCAGCAGCAAAGACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| 3UTR CCA 72 bp | TGTGTAATGCAATGCTGTGGCTGTGTAGGTCTTTGTTaGGATCTGAATGAGAATGGCCCTCACAGGGTCATA | + |
|
Preference number: 3 (lower is better) Translates to: CVMQCCGCVGLC*DLNENGPHRVI Trigger: TATGACCCTGTGAGGGCCATTCTCATTCAGATCCCAACAAAGACCTACACAGCCACAGCATTGCATTACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAGTGGTTCTCCCTGGCTCAAGAGAGATCAAAGAGATCAATCAGAATGGCATTCCCAGATTGTTTGTTTaGTTTTTCCTGCCCTCCACC | + |
|
Preference number: 3 (lower is better) Translates to: TVVLPGSREIKEINQNGIPRLFV*FFLPST Trigger: GGTGGAGGGCAGGAAAAACAAAACAAACAATCTGGG...AATGCCATTCTGATTGATCTCTTTGATCTCTCTTGAGCCAGGGAGAACCACTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCTCTGGAACTGGAGTTGAAGACAGTTTTGAGCTGCCATGTAGGTGTTGGGAACTGGAGTGCTCAGTTTaGGAAACTTTGGTAGATTCT | + |
|
Preference number: 3 (lower is better) Translates to: SSGTGVEDSFELPCRCWELECSV*ETLVDS Trigger: AGAATCTACCAAAGTTTCCAAAACTGAGCACTCCAG...TTCCCAACACCTACATGGCAGCTCAAAACTGTCTTCAACTCCAGTTCCAGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| 3UTR GCA 72 bp | CTGGGAGTTGAACCTGGAGCATCTGAAAGGGCTCTCTaGTCCTTTACCTTAATTTTTGAAACAGGTTCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: LGVEPGASERAL*SFTLIFETGSL Trigger: GAGAGAACCTGTTTCAAAAATTAAGGTAAAGGAGCAGAGAGCCCTTTCAGATGCTCCAGGTTCAACTCCCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTACAAAGCCTGTGTTTCCTGTAGTGTTCCCAAACTCCCCATCACAAACCACACTGGAGTGCTCAGTTTaGGAAACTTTGGTAGATTCT | + |
|
Preference number: 3 (lower is better) Translates to: CTKPVFPVVFPNSPSQTTLECSV*ETLVDS Trigger: AGAATCTACCAAAGTTTCCAAAACTGAGCACTCCAG...TGTGGTTTGTGATGGGGAGTTTGGGAACACTACAGGAAACACAGGCTTTGTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTTTCAGAAACCCACACCAGGCCCAGTCTCACTCTACTGCATATCTGTGGATCTACTTGATTGGTTGGTaGTTGGGGTTGTTTTGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: CFRNPHQAQSHSTAYLWIYLIGW*LGLFCF Trigger: AAAACAAAACAACCCCAACAACCAACCAATCAAGTA...GATCCACAGATATGCAGTAGAGTGAGACTGGGCCTGGTGTGGGTTTCTGAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCTCTGGAACTGGAGTTGAAGACAGTTTTGAGCTGCCATGTAGGTGTTGGGAACATCTCTCCAACCCTTaGGATTTTTACTTGATTGGT | + |
|
Preference number: 3 (lower is better) Translates to: SSGTGVEDSFELPCRCWEHLSNP*DFYLIG Trigger: ACCAATCAAGTAAAAATCCAAAGGGTTGGAGAGATG...TTCCCAACACCTACATGGCAGCTCAAAACTGTCTTCAACTCCAGTTCCAGAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAACCCACACCAGGCCCAGTCTCACTCTACTGCATATCTGTGGATCAAGCATATTTATTTCATGTGCATaGGTGTTTTGCCTGCTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: ETHTRPSLTLLHICGSSIFISCA*VFCLLV Trigger: TACAAGCAGGCAAAACACCAATGCACATGAAATAAA...TATGCTTGATCCACAGATATGCAGTAGAGTGAGACTGGGCCTGGTGTGGGTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTACAAAGCCTGTGTTTCCTGTAGTGTTCCCAAACTCCCCATCACAAACCACACATATATTTAAATGCTaGGTCTGCAGTGGGTGGACT | + |
|
Preference number: 3 (lower is better) Translates to: CTKPVFPVVFPNSPSQTTHIFKC*VCSGWT Trigger: AGTCCACCCACTGCAGACCAAGCATTTAAATATATG...TGTGGTTTGTGATGGGGAGTTTGGGAACACTACAGGAAACACAGGCTTTGTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
||
| 3UTR CCA 72 bp | AATTTAAAGGTTGTAAACTGTTGGGACTACAGAGTATaGAAAGGGGAGGTAGCAGGGAGCCTCAGAAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: NLKVVNCWDYRV*KGEVAGSLRRK Trigger: TTTCCTTCTGAGGCTCCCTGCTACCTCCCCTTTCCATACTCTGTAGTCCCAACAGTTTACAACCTTTAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAGTGGTTCTCCCTGGCTCAAGAGAGATCAAAGAGATCAATCAGAATGGCATTCTGGAGTGCTCAGTTTaGGAAACTTTGGTAGATTCT | + |
|
Preference number: 3 (lower is better) Translates to: TVVLPGSREIKEINQNGILECSV*ETLVDS Trigger: AGAATCTACCAAAGTTTCCAAAACTGAGCACTCCAG...AATGCCATTCTGATTGATCTCTTTGATCTCTCTTGAGCCAGGGAGAACCACTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTGGGGTAAAGATTTACCAGCCTTACCTTTTACAATTACTGTATTTCTATCTAAAGGCTGGGCTGTCTTaGCTGCTGCTCAAGCATCCT | + |
|
Preference number: 3 (lower is better) Translates to: GGVKIYQPYLLQLLYFYLKAGLS*LLLKHP Trigger: AGGATGCTTGAGCAGCAGCAAAGACAGCCCAGCCTT...TAGATAGAAATACAGTAATTGTAAAAGGTAAGGCTGGTAAATCTTTACCCCACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTCACTCTACTGCATATCTGTGGATCAAGCATAAGCTCTCAGCGCCATCCTTGTACTTGATTGGTTGGTaGTTGGGGTTGTTTTGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: SHSTAYLWIKHKLSAPSLYLIGW*LGLFCF Trigger: AAAACAAAACAACCCCAACAACCAACCAATCAAGTA...CAAGGATGGCGCTGAGAGCTTATGCTTGATCCACAGATATGCAGTAGAGTGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTGGGGTAAAGATTTACCAGCCTTACCTTTTACAATTACTGTATTTCTATCTACCCAGATTGTTTGTTTaGTTTTTCCTGCCCTCCACC | + |
|
Preference number: 3 (lower is better) Translates to: GGVKIYQPYLLQLLYFYLPRLFV*FFLPST Trigger: GGTGGAGGGCAGGAAAAACAAAACAAACAATCTGGG...TAGATAGAAATACAGTAATTGTAAAAGGTAAGGCTGGTAAATCTTTACCCCACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
||
| 3UTR GCA 72 bp | CTACAAAATCAAATTAGCATTCAAGAGCAAACAAAATaGCACCTGTGTAGTGCTGTGGCTCATAGGCATATG | + |
|
Preference number: 3 (lower is better) Translates to: LQNQISIQEQTK*HLCSAVAHRHM Trigger: CATATGCCTATGAGCCACAGCACTACACAGGTGGCATTTTGTTTGCTCTTGAATGCTAATTTGATTTTGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
||
| 3UTR CCA 72 bp | CTTTGTCCTTGTAACATTTTGCCAGCAAAACACACTTaGACAACCAGATCCTTCTACAGCAAATCTTTATTG | + |
|
Preference number: 3 (lower is better) Translates to: LCPCNILPAKHT*TTRSFYSKSLL Trigger: CAATAAAGATTTGCTGTAGAAGGATCTGGTTGTCCAAGTGTGTTTTGCTGGCAAAATGTTACAAGGACAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166236.9 |
||
| 3UTR CCA 72 bp | ATTCTCTGTCATAGGGTCCTTTATGTAAGTAATTCTTaGCAAGCATATAGATTAAGCAAGTACATTGAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: ILCHRVLYVSNS*QAYRLSKYIEG Trigger: ACCTTCAATGTACTTGCTTAATCTATATGCTTGCCAAGAATTACTTACATAAAGGACCCTATGACAGAGAAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
||
| CDS-3UTR TCA 90 bp | CAGGGAGCCTCAGAAGGAAAGGCCATGTCACTGGCAAAGAGATGGGAGAACCTGGTCTGGAACATCCATTaGCCAGCAGCAGCAATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QGASEGKAMSLAKRWENLVWNIH*PAAAMA Trigger: GGCCATTGCTGCTGCTGGTCAATGGATGTTCCAGAC...CAGGTTCTCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCTGAGGCTCCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR TCA 90 bp | GAGGTAGCAGGGAGCCTCAGAAGGAAAGGCCATGTCACTGGCAAAGAGATGGGAGTCTGGAACATCCATTaGCCAGCAGCAGCAATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: EVAGSLRRKGHVTGKEMGVWNIH*PAAAMA Trigger: GGCCATTGCTGCTGCTGGTCAATGGATGTTCCAGAC...TCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCTGAGGCTCCCTGCTACCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR TCA 90 bp | CAGGGAGCCTCAGAAGGAAAGGCCATGTCACTGGCAAAGAGATGGGAGAACCTGTTCTGCCTCCAGACCTaGGCCTTCATGGCCTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: QGASEGKAMSLAKRWENLFCLQT*AFMACT Trigger: TGTACAGGCCATGAAGGCTCAGGTCTGGAGGCAGAA...CAGGTTCTCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCTGAGGCTCCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR TCA 90 bp | GCAACCACCATATGGGTGCTGGGAGTTGAACCTGGAGCATCTGAAAGGGCTCTCTTCTGCCTCCAGACCTaGGCCTTCATGGCCTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: ATTIWVLGVEPGASERALFCLQT*AFMACT Trigger: TGTACAGGCCATGAAGGCTCAGGTCTGGAGGCAGAA...GAGAGCCCTTTCAGATGCTCCAGGTTCAACTCCCAGCACCCATATGGTGGTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
||
| CDS-3UTR TCA 90 bp | CAGGGAGCCTCAGAAGGAAAGGCCATGTCACTGGCAAAGAGATGGGAGAACCTGCTCTCTCCTTGTGAATaGAACCCACTGGGCCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QGASEGKAMSLAKRWENLLSPCE*NPLGLA Trigger: AGCCAGGCCCAGTGGGTTTCATTCACAAGGAGAGAG...CAGGTTCTCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCTGAGGCTCCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR GCA 90 bp | CTCTGCCTCCAAAACCCAGCTGCACTGATGATCAGCATGTGCAAGGCTGGGCTGGGTGCAGAGCACAGCTaGCATCACCCAGATGGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: LCLQNPAALMISMCKAGLGAEHS*HHPDGN Trigger: ATTACCATCTGGGTGATGGCAGCTGTGCTCTGCACC...CAGCCCAGCCTTGCACATGCTGATCATCAGTGCAGCTGGGTTTTGGAGGCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR CCA 90 bp | CTCTGCCTCCAAAACCCAGCTGCACTGATGATCAGCATGTGCAAGGCTGGGCTGGTGAATGAAACCCACTaGGCCTGGCTAATGCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: LCLQNPAALMISMCKAGLVNETH*AWLMHP Trigger: GGGATGCATTAGCCAGGCCCAGTGGGTTTCATTCAC...CAGCCCAGCCTTGCACATGCTGATCATCAGTGCAGCTGGGTTTTGGAGGCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| 3UTR CAA 72 bp | TGGCAAAGAGATGGGAGAACCTGCAGCAAGTGCCTCTaGCCTGAGGAAGTCCCAAAGGCTAGGTTCCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: WQRDGRTCSKCL*PEEVPKARFPP Trigger: TGGTGGGAACCTAGCCTTTGGGACTTCCTCAGGCAAGAGGCACTTGCTGCAGGTTCTCCCATCTCTTTGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR TCA 90 bp | GAGGTAGCAGGGAGCCTCAGAAGGAAAGGCCATGTCACTGGCAAAGAGATGGGACCAAGGTGCCCACAATaGACACAAGCCAGTACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: EVAGSLRRKGHVTGKEMGPRCPQ*TQASTE Trigger: CTCTGTACTGGCTTGTGTTCATTGTGGGCACCTTGG...TCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCTGAGGCTCCCTGCTACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR TCA 90 bp | AGAAGGAAAGGCCATGTCACTGGCAAAGAGATGGGAGAACCTGCAGCAAGTGCCGTCTGGAACATCCATTaGCCAGCAGCAGCAATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RRKGHVTGKEMGEPAASAVWNIH*PAAAMA Trigger: GGCCATTGCTGCTGCTGGTCAATGGATGTTCCAGAC...GGCACTTGCTGCAGGTTCTCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR TCA 90 bp | CTCTGCCTCCAAAACCCAGCTGCACTGATGATCAGCATGTGCAAGGCTGGGCTGGATTCCCCACTGACTTaGCTGTACAGGATTTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LCLQNPAALMISMCKAGLDSPLT*LYRISG Trigger: CCCAGAAATCCTGTACAGTCAAGTCAGTGGGGAATC...CAGCCCAGCCTTGCACATGCTGATCATCAGTGCAGCTGGGTTTTGGAGGCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR TCA 90 bp | CAGGGAGCCTCAGAAGGAAAGGCCATGTCACTGGCAAAGAGATGGGAGAACCTGGGCCTTGTGCTTGGATaGCTTCTTGGCCTGTACCAA | + |
|
Preference number: 4 (lower is better) Translates to: QGASEGKAMSLAKRWENLGLVLG*LLGLYQ Trigger: TTGGTACAGGCCAAGAAGTCATCCAAGCACAAGGCC...CAGGTTCTCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCTGAGGCTCCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR TCA 90 bp | GCAACCACCATATGGGTGCTGGGAGTTGAACCTGGAGCATCTGAAAGGGCTCTCGGCCTTGTGCTTGGATaGCTTCTTGGCCTGTACCAA | + |
|
Preference number: 4 (lower is better) Translates to: ATTIWVLGVEPGASERALGLVLG*LLGLYQ Trigger: TTGGTACAGGCCAAGAAGTCATCCAAGCACAAGGCC...GAGAGCCCTTTCAGATGCTCCAGGTTCAACTCCCAGCACCCATATGGTGGTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
||
| CDS-3UTR GCA 90 bp | GAGGTAGCAGGGAGCCTCAGAAGGAAAGGCCATGTCACTGGCAAAGAGATGGGAGGTGCAGAGCACAGCTaGCATCACCCAGATGGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: EVAGSLRRKGHVTGKEMGGAEHS*HHPDGN Trigger: ATTACCATCTGGGTGATGGCAGCTGTGCTCTGCACC...TCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCTGAGGCTCCCTGCTACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR GCA 90 bp | GAGGTAGCAGGGAGCCTCAGAAGGAAAGGCCATGTCACTGGCAAAGAGATGGGAACAGGATTTCTGGGGTaGAGAGCACAGCTGCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: EVAGSLRRKGHVTGKEMGTGFLG*RAQLPS Trigger: TGATGGCAGCTGTGCTCTGCACCCCAGAAATCCTGT...TCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCTGAGGCTCCCTGCTACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR GCA 90 bp | CAGGGAGCCTCAGAAGGAAAGGCCATGTCACTGGCAAAGAGATGGGAGAACCTGACAGGATTTCTGGGGTaGAGAGCACAGCTGCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: QGASEGKAMSLAKRWENLTGFLG*RAQLPS Trigger: TGATGGCAGCTGTGCTCTGCACCCCAGAAATCCTGT...CAGGTTCTCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCTGAGGCTCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR GCA 90 bp | GAGGTAGCAGGGAGCCTCAGAAGGAAAGGCCATGTCACTGGCAAAGAGATGGGAACCTTGAGGGCCTTGTaGTTGGATGACTTCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: EVAGSLRRKGHVTGKEMGTLRAL*LDDFLA Trigger: GGCCAAGAAGTCATCCAAGCACAAGGCCCTCAAGGT...TCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCTGAGGCTCCCTGCTACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR CCA 90 bp | GAGGTAGCAGGGAGCCTCAGAAGGAAAGGCCATGTCACTGGCAAAGAGATGGGAACTGTACAGGATTTCTaGGGTGCAGAGCACAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EVAGSLRRKGHVTGKEMGTVQDF*GAEHSC Trigger: GCAGCTGTGCTCTGCACCCCAGAAATCCTGTACAGT...TCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCTGAGGCTCCCTGCTACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR CCA 90 bp | GAGGTAGCAGGGAGCCTCAGAAGGAAAGGCCATGTCACTGGCAAAGAGATGGGAGTGAATGAAACCCACTaGGCCTGGCTAATGCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: EVAGSLRRKGHVTGKEMGVNETH*AWLMHP Trigger: GGGATGCATTAGCCAGGCCCAGTGGGTTTCATTCAC...TCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCTGAGGCTCCCTGCTACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| 3UTR CAA 72 bp | GCACTGATGATCAGCATGTGCAAGGCTGGGCTGTCTTaGCTGCTGCTCAAGCATCCTCCTCAGAACTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ALMISMCKAGLS*LLLKHPPQNCS Trigger: ACTGCAGTTCTGAGGAGGATGCTTGAGCAGCAGCAAAGACAGCCCAGCCTTGCACATGCTGATCATCAGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| 3UTR CAA 72 bp | TACAGACAGCTGCAACCACCATATGGGTGCTGGGAGTaGAACCTGGAGCATCTGAAAGGGCTCTCTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: YRQLQPPYGCWE*NLEHLKGLSAP Trigger: AGGAGCAGAGAGCCCTTTCAGATGCTCCAGGTTCAACTCCCAGCACCCATATGGTGGTTGCAGCTGTCTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
||
| CDS-3UTR TCA 90 bp | GAGGTAGCAGGGAGCCTCAGAAGGAAAGGCCATGTCACTGGCAAAGAGATGGGAGATTCCCCACTGACTTaGCTGTACAGGATTTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: EVAGSLRRKGHVTGKEMGDSPLT*LYRISG Trigger: CCCAGAAATCCTGTACAGTCAAGTCAGTGGGGAATC...TCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCTGAGGCTCCCTGCTACCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| CDS-3UTR TCA 90 bp | CAGGGAGCCTCAGAAGGAAAGGCCATGTCACTGGCAAAGAGATGGGAGAACCTGGATTCCCCACTGACTTaGCTGTACAGGATTTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QGASEGKAMSLAKRWENLDSPLT*LYRISG Trigger: CCCAGAAATCCTGTACAGTCAAGTCAGTGGGGAATC...CAGGTTCTCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCTGAGGCTCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| CDS-3UTR TCA 90 bp | GAGGTAGCAGGGAGCCTCAGAAGGAAAGGCCATGTCACTGGCAAAGAGATGGGAGGAAAAACCCCAAGGTaGCCTTCAGGATCAAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: EVAGSLRRKGHVTGKEMGGKTPR*PSGSRQ Trigger: CTGTCTTGATCCTGAAGGTCACCTTGGGGTTTTTCC...TCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCTGAGGCTCCCTGCTACCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR TCA 90 bp | TATGGGTGCTGGGAGTTGAACCTGGAGCATCTGAAAGGGCTCTCTGCTCCTTTACTCTCTCCTTGTGAATaGAACCCACTGGGCCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: YGCWELNLEHLKGLSAPLLSPCE*NPLGLA Trigger: AGCCAGGCCCAGTGGGTTTCATTCACAAGGAGAGAG...TAAAGGAGCAGAGAGCCCTTTCAGATGCTCCAGGTTCAACTCCCAGCACCCATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
||
| CDS-3UTR TCA 90 bp | AGAAGGAAAGGCCATGTCACTGGCAAAGAGATGGGAGAACCTGCAGCAAGTGCCTACCCTCTCTCCTTGTaGATGAAACCCACTGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RRKGHVTGKEMGEPAASAYPLSL*MKPTGP Trigger: AGGCCCAGTGGGTTTCATTCACAAGGAGAGAGGGTA...GGCACTTGCTGCAGGTTCTCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR GCA 90 bp | AGAAGGAAAGGCCATGTCACTGGCAAAGAGATGGGAGAACCTGCAGCAAGTGCCACCTTGAGGGCCTTGTaGTTGGATGACTTCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RRKGHVTGKEMGEPAASATLRAL*LDDFLA Trigger: GGCCAAGAAGTCATCCAAGCACAAGGCCCTCAAGGT...GGCACTTGCTGCAGGTTCTCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR CCA 90 bp | AGAAGGAAAGGCCATGTCACTGGCAAAGAGATGGGAGAACCTGCAGCAAGTGCCACTGTACAGGATTTCTaGGGTGCAGAGCACAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RRKGHVTGKEMGEPAASATVQDF*GAEHSC Trigger: GCAGCTGTGCTCTGCACCCCAGAAATCCTGTACAGT...GGCACTTGCTGCAGGTTCTCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR CCA 90 bp | CTCTGCCTCCAAAACCCAGCTGCACTGATGATCAGCATGTGCAAGGCTGGGCTGCCTGCACTACAAGAATaGAGTTGTAGGGGAACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LCLQNPAALMISMCKAGLPALQE*SCRGTE Trigger: CTCAGTTCCCCTACAACTCCATTCTTGTAGTGCAGG...CAGCCCAGCCTTGCACATGCTGATCATCAGTGCAGCTGGGTTTTGGAGGCAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR TCA 90 bp | GGGACAGTGGTTCTCCCTGGCTCAAGAGAGATCAAAGAGATCAATCAGAATGGCGTCTGGAACATCCATTaGCCAGCAGCAGCAATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GTVVLPGSREIKEINQNGVWNIH*PAAAMA Trigger: GGCCATTGCTGCTGCTGGTCAATGGATGTTCCAGAC...GCCATTCTGATTGATCTCTTTGATCTCTCTTGAGCCAGGGAGAACCACTGTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR TCA 90 bp | GGGACAGTGGTTCTCCCTGGCTCAAGAGAGATCAAAGAGATCAATCAGAATGGCTTCTGCCTCCAGACCTaGGCCTTCATGGCCTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: GTVVLPGSREIKEINQNGFCLQT*AFMACT Trigger: TGTACAGGCCATGAAGGCTCAGGTCTGGAGGCAGAA...GCCATTCTGATTGATCTCTTTGATCTCTCTTGAGCCAGGGAGAACCACTGTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR TCA 90 bp | AGAAGGAAAGGCCATGTCACTGGCAAAGAGATGGGAGAACCTGCAGCAAGTGCCGGAAAAACCCCAAGGTaGCCTTCAGGATCAAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: RRKGHVTGKEMGEPAASAGKTPR*PSGSRQ Trigger: CTGTCTTGATCCTGAAGGTCACCTTGGGGTTTTTCC...GGCACTTGCTGCAGGTTCTCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR TCA 90 bp | GGGACAGTGGTTCTCCCTGGCTCAAGAGAGATCAAAGAGATCAATCAGAATGGCCTCTCTCCTTGTGAATaGAACCCACTGGGCCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GTVVLPGSREIKEINQNGLSPCE*NPLGLA Trigger: AGCCAGGCCCAGTGGGTTTCATTCACAAGGAGAGAG...GCCATTCTGATTGATCTCTTTGATCTCTCTTGAGCCAGGGAGAACCACTGTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR TCA 90 bp | CAGGGAGCCTCAGAAGGAAAGGCCATGTCACTGGCAAAGAGATGGGAGAACCTGCAGTGGAGTCATAGCTaGAGTCATCAAACATGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QGASEGKAMSLAKRWENLQWSHS*SHQTCQ Trigger: CTGGCATGTTTGATGACTTCAGCTATGACTCCACTG...CAGGTTCTCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCTGAGGCTCCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR TCA 90 bp | GCAACCACCATATGGGTGCTGGGAGTTGAACCTGGAGCATCTGAAAGGGCTCTCCAGTGGAGTCATAGCTaGAGTCATCAAACATGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ATTIWVLGVEPGASERALQWSHS*SHQTCQ Trigger: CTGGCATGTTTGATGACTTCAGCTATGACTCCACTG...GAGAGCCCTTTCAGATGCTCCAGGTTCAACTCCCAGCACCCATATGGTGGTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
||
| CDS-3UTR CCA 90 bp | CTCTGCCTCCAAAACCCAGCTGCACTGATGATCAGCATGTGCAAGGCTGGGCTGTCATGTAGTCATCTGTaGAAGCAGTGGAGTCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: LCLQNPAALMISMCKAGLSCSHL*KQWSHS Trigger: GCTATGACTCCACTGCTTCCACAGATGACTACATGA...CAGCCCAGCCTTGCACATGCTGATCATCAGTGCAGCTGGGTTTTGGAGGCAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR CCA 90 bp | CTCTGCCTCCAAAACCCAGCTGCACTGATGATCAGCATGTGCAAGGCTGGGCTGAGAGGTGGAAGAAAATaGCTTGCAAACTGCCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: LCLQNPAALMISMCKAGLRGGRK*LANCLT Trigger: TGTCAGGCAGTTTGCAAGCCATTTTCTTCCACCTCT...CAGCCCAGCCTTGCACATGCTGATCATCAGTGCAGCTGGGTTTTGGAGGCAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR CCA 90 bp | GAGGTAGCAGGGAGCCTCAGAAGGAAAGGCCATGTCACTGGCAAAGAGATGGGACCTGCACTACAAGAATaGAGTTGTAGGGGAACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: EVAGSLRRKGHVTGKEMGPALQE*SCRGTE Trigger: CTCAGTTCCCCTACAACTCCATTCTTGTAGTGCAGG...TCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCTGAGGCTCCCTGCTACCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR CCA 90 bp | TATGGGTGCTGGGAGTTGAACCTGGAGCATCTGAAAGGGCTCTCTGCTCCTTTAGTGAATGAAACCCACTaGGCCTGGCTAATGCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: YGCWELNLEHLKGLSAPLVNETH*AWLMHP Trigger: GGGATGCATTAGCCAGGCCCAGTGGGTTTCATTCAC...TAAAGGAGCAGAGAGCCCTTTCAGATGCTCCAGGTTCAACTCCCAGCACCCATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
||
| CDS-3UTR TCA 90 bp | CCAACTGCTGCGCTTCTGGAGTGCTCAGTTTTGGAAACTTTGGTAGATTCTGACGTCTGGAACATCCATTaGCCAGCAGCAGCAATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PTAALLECSVLETLVDSDVWNIH*PAAAMA Trigger: GGCCATTGCTGCTGCTGGTCAATGGATGTTCCAGAC...GTCAGAATCTACCAAAGTTTCCAAAACTGAGCACTCCAGAAGCGCAGCAGTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR TCA 90 bp | CCAACTGCTGCGCTTCTGGAGTGCTCAGTTTTGGAAACTTTGGTAGATTCTGACTTCTGCCTCCAGACCTaGGCCTTCATGGCCTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: PTAALLECSVLETLVDSDFCLQT*AFMACT Trigger: TGTACAGGCCATGAAGGCTCAGGTCTGGAGGCAGAA...GTCAGAATCTACCAAAGTTTCCAAAACTGAGCACTCCAGAAGCGCAGCAGTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR TCA 90 bp | GCCCAGTCTCACTCTACTGCATATCTGTGGATCAAGCATAAGCTCTCAGCGCCAGATTCCCCACTGACTTaGCTGTACAGGATTTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: AQSHSTAYLWIKHKLSAPDSPLT*LYRISG Trigger: CCCAGAAATCCTGTACAGTCAAGTCAGTGGGGAATC...TGGCGCTGAGAGCTTATGCTTGATCCACAGATATGCAGTAGAGTGAGACTGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
||
| CDS-3UTR TCA 90 bp | TCTCACTCTACTGCATATCTGTGGATCAAGCATAAGCTCTCAGCGCCATCCTTGCTCTCTCCTTGTGAATaGAACCCACTGGGCCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SHSTAYLWIKHKLSAPSLLSPCE*NPLGLA Trigger: AGCCAGGCCCAGTGGGTTTCATTCACAAGGAGAGAG...CAAGGATGGCGCTGAGAGCTTATGCTTGATCCACAGATATGCAGTAGAGTGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
||
| CDS-3UTR TCA 90 bp | GGGACAGTGGTTCTCCCTGGCTCAAGAGAGATCAAAGAGATCAATCAGAATGGCTACCCTCTCTCCTTGTaGATGAAACCCACTGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GTVVLPGSREIKEINQNGYPLSL*MKPTGP Trigger: AGGCCCAGTGGGTTTCATTCACAAGGAGAGAGGGTA...GCCATTCTGATTGATCTCTTTGATCTCTCTTGAGCCAGGGAGAACCACTGTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR TCA 90 bp | TGTTTCAGAAACCCACACCAGGCCCAGTCTCACTCTACTGCATATCTGTGGATCTACCCTCTCTCCTTGTaGATGAAACCCACTGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: CFRNPHQAQSHSTAYLWIYPLSL*MKPTGP Trigger: AGGCCCAGTGGGTTTCATTCACAAGGAGAGAGGGTA...GATCCACAGATATGCAGTAGAGTGAGACTGGGCCTGGTGTGGGTTTCTGAAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
||
| CDS-3UTR TCA 90 bp | AGAAGGAAAGGCCATGTCACTGGCAAAGAGATGGGAGAACCTGCAGCAAGTGCCCAGTGGAGTCATAGCTaGAGTCATCAAACATGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RRKGHVTGKEMGEPAASAQWSHS*SHQTCQ Trigger: CTGGCATGTTTGATGACTTCAGCTATGACTCCACTG...GGCACTTGCTGCAGGTTCTCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR GCA 90 bp | CTCTGCCTCCAAAACCCAGCTGCACTGATGATCAGCATGTGCAAGGCTGGGCTGTGGTCTTCACTCTTGTaGAATACCAGTAGACAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LCLQNPAALMISMCKAGLWSSLL*NTSRQG Trigger: TCCTTGTCTACTGGTATTGCACAAGAGTGAAGACCA...CAGCCCAGCCTTGCACATGCTGATCATCAGTGCAGCTGGGTTTTGGAGGCAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR GCA 90 bp | TGTTTCAGAAACCCACACCAGGCCCAGTCTCACTCTACTGCATATCTGTGGATCACCTTGAGGGCCTTGTaGTTGGATGACTTCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: CFRNPHQAQSHSTAYLWITLRAL*LDDFLA Trigger: GGCCAAGAAGTCATCCAAGCACAAGGCCCTCAAGGT...GATCCACAGATATGCAGTAGAGTGAGACTGGGCCTGGTGTGGGTTTCTGAAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
||
| CDS-3UTR CCA 90 bp | CAGGGAGCCTCAGAAGGAAAGGCCATGTCACTGGCAAAGAGATGGGAGAACCTGAGAGGTGGAAGAAAATaGCTTGCAAACTGCCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: QGASEGKAMSLAKRWENLRGGRK*LANCLT Trigger: TGTCAGGCAGTTTGCAAGCCATTTTCTTCCACCTCT...CAGGTTCTCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCTGAGGCTCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR CCA 90 bp | CTCTGCCTCCAAAACCCAGCTGCACTGATGATCAGCATGTGCAAGGCTGGGCTGGGAACATGTCAGTCATaGTCTTCACTCTTGTGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LCLQNPAALMISMCKAGLGTCQS*SSLLCN Trigger: ATTGCACAAGAGTGAAGACCATGACTGACATGTTCC...CAGCCCAGCCTTGCACATGCTGATCATCAGTGCAGCTGGGTTTTGGAGGCAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR CCA 90 bp | GGGACAGTGGTTCTCCCTGGCTCAAGAGAGATCAAAGAGATCAATCAGAATGGCACTGTACAGGATTTCTaGGGTGCAGAGCACAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GTVVLPGSREIKEINQNGTVQDF*GAEHSC Trigger: GCAGCTGTGCTCTGCACCCCAGAAATCCTGTACAGT...GCCATTCTGATTGATCTCTTTGATCTCTCTTGAGCCAGGGAGAACCACTGTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR CCA 90 bp | GAAACCCACACCAGGCCCAGTCTCACTCTACTGCATATCTGTGGATCAAGCATAACTGTACAGGATTTCTaGGGTGCAGAGCACAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ETHTRPSLTLLHICGSSITVQDF*GAEHSC Trigger: GCAGCTGTGCTCTGCACCCCAGAAATCCTGTACAGT...TATGCTTGATCCACAGATATGCAGTAGAGTGAGACTGGGCCTGGTGTGGGTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
||
| CDS-3UTR CCA 90 bp | GGGACAGTGGTTCTCCCTGGCTCAAGAGAGATCAAAGAGATCAATCAGAATGGCGTGAATGAAACCCACTaGGCCTGGCTAATGCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: GTVVLPGSREIKEINQNGVNETH*AWLMHP Trigger: GGGATGCATTAGCCAGGCCCAGTGGGTTTCATTCAC...GCCATTCTGATTGATCTCTTTGATCTCTCTTGAGCCAGGGAGAACCACTGTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR TCA 90 bp | CCAACTGCTGCGCTTCTGGAGTGCTCAGTTTTGGAAACTTTGGTAGATTCTGACCCAAGGTGCCCACAATaGACACAAGCCAGTACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PTAALLECSVLETLVDSDPRCPQ*TQASTE Trigger: CTCTGTACTGGCTTGTGTTCATTGTGGGCACCTTGG...GTCAGAATCTACCAAAGTTTCCAAAACTGAGCACTCCAGAAGCGCAGCAGTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR TCA 90 bp | GGGACAGTGGTTCTCCCTGGCTCAAGAGAGATCAAAGAGATCAATCAGAATGGCGGAAAAACCCCAAGGTaGCCTTCAGGATCAAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: GTVVLPGSREIKEINQNGGKTPR*PSGSRQ Trigger: CTGTCTTGATCCTGAAGGTCACCTTGGGGTTTTTCC...GCCATTCTGATTGATCTCTTTGATCTCTCTTGAGCCAGGGAGAACCACTGTCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR TCA 90 bp | CCAACTGCTGCGCTTCTGGAGTGCTCAGTTTTGGAAACTTTGGTAGATTCTGACGGCCTTGTGCTTGGATaGCTTCTTGGCCTGTACCAA | + |
|
Preference number: 4 (lower is better) Translates to: PTAALLECSVLETLVDSDGLVLG*LLGLYQ Trigger: TTGGTACAGGCCAAGAAGTCATCCAAGCACAAGGCC...GTCAGAATCTACCAAAGTTTCCAAAACTGAGCACTCCAGAAGCGCAGCAGTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR TCA 90 bp | CCAACTGCTGCGCTTCTGGAGTGCTCAGTTTTGGAAACTTTGGTAGATTCTGACTACCCTCTCTCCTTGTaGATGAAACCCACTGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PTAALLECSVLETLVDSDYPLSL*MKPTGP Trigger: AGGCCCAGTGGGTTTCATTCACAAGGAGAGAGGGTA...GTCAGAATCTACCAAAGTTTCCAAAACTGAGCACTCCAGAAGCGCAGCAGTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR GCA 90 bp | CAGGGAGCCTCAGAAGGAAAGGCCATGTCACTGGCAAAGAGATGGGAGAACCTGTGGTCTTCACTCTTGTaGAATACCAGTAGACAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QGASEGKAMSLAKRWENLWSSLL*NTSRQG Trigger: TCCTTGTCTACTGGTATTGCACAAGAGTGAAGACCA...CAGGTTCTCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCTGAGGCTCCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR GCA 90 bp | TCCTCTGGAACTGGAGTTGAAGACAGTTTTGAGCTGCCATGTAGGTGTTGGGAAGGTGCAGAGCACAGCTaGCATCACCCAGATGGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: SSGTGVEDSFELPCRCWEGAEHS*HHPDGN Trigger: ATTACCATCTGGGTGATGGCAGCTGTGCTCTGCACC...TTCCCAACACCTACATGGCAGCTCAAAACTGTCTTCAACTCCAGTTCCAGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR GCA 90 bp | CCAACTGCTGCGCTTCTGGAGTGCTCAGTTTTGGAAACTTTGGTAGATTCTGACACCTTGAGGGCCTTGTaGTTGGATGACTTCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PTAALLECSVLETLVDSDTLRAL*LDDFLA Trigger: GGCCAAGAAGTCATCCAAGCACAAGGCCCTCAAGGT...GTCAGAATCTACCAAAGTTTCCAAAACTGAGCACTCCAGAAGCGCAGCAGTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR GCA 90 bp | TCCTCTGGAACTGGAGTTGAAGACAGTTTTGAGCTGCCATGTAGGTGTTGGGAAACCTTGAGGGCCTTGTaGTTGGATGACTTCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSGTGVEDSFELPCRCWETLRAL*LDDFLA Trigger: GGCCAAGAAGTCATCCAAGCACAAGGCCCTCAAGGT...TTCCCAACACCTACATGGCAGCTCAAAACTGTCTTCAACTCCAGTTCCAGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR CCA 90 bp | CAGGGAGCCTCAGAAGGAAAGGCCATGTCACTGGCAAAGAGATGGGAGAACCTGGGAACATGTCAGTCATaGTCTTCACTCTTGTGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: QGASEGKAMSLAKRWENLGTCQS*SSLLCN Trigger: ATTGCACAAGAGTGAAGACCATGACTGACATGTTCC...CAGGTTCTCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCTGAGGCTCCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR CCA 90 bp | TCTCACTCTACTGCATATCTGTGGATCAAGCATAAGCTCTCAGCGCCATCCTTGACTGTACAGGATTTCTaGGGTGCAGAGCACAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SHSTAYLWIKHKLSAPSLTVQDF*GAEHSC Trigger: GCAGCTGTGCTCTGCACCCCAGAAATCCTGTACAGT...CAAGGATGGCGCTGAGAGCTTATGCTTGATCCACAGATATGCAGTAGAGTGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
||
| CDS-3UTR TCA 90 bp | GAGGTAGCAGGGAGCCTCAGAAGGAAAGGCCATGTCACTGGCAAAGAGATGGGAGGCTTGCAAACTGCCTaGCATTATTTTTCTTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: EVAGSLRRKGHVTGKEMGGLQTA*HYFSYR Trigger: TCTGTAAGAAAAATAATGTCAGGCAGTTTGCAAGCC...TCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCTGAGGCTCCCTGCTACCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR TCA 90 bp | CAGGGAGCCTCAGAAGGAAAGGCCATGTCACTGGCAAAGAGATGGGAGAACCTGGGCTTGCAAACTGCCTaGCATTATTTTTCTTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: QGASEGKAMSLAKRWENLGLQTA*HYFSYR Trigger: TCTGTAAGAAAAATAATGTCAGGCAGTTTGCAAGCC...CAGGTTCTCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCTGAGGCTCCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR TCA 90 bp | TCCTCTGGAACTGGAGTTGAAGACAGTTTTGAGCTGCCATGTAGGTGTTGGGAAGATTCCCCACTGACTTaGCTGTACAGGATTTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSGTGVEDSFELPCRCWEDSPLT*LYRISG Trigger: CCCAGAAATCCTGTACAGTCAAGTCAGTGGGGAATC...TTCCCAACACCTACATGGCAGCTCAAAACTGTCTTCAACTCCAGTTCCAGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR TCA 90 bp | TCCTCTGGAACTGGAGTTGAAGACAGTTTTGAGCTGCCATGTAGGTGTTGGGAAGGAAAAACCCCAAGGTaGCCTTCAGGATCAAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: SSGTGVEDSFELPCRCWEGKTPR*PSGSRQ Trigger: CTGTCTTGATCCTGAAGGTCACCTTGGGGTTTTTCC...TTCCCAACACCTACATGGCAGCTCAAAACTGTCTTCAACTCCAGTTCCAGAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR TCA 90 bp | CCAACTGCTGCGCTTCTGGAGTGCTCAGTTTTGGAAACTTTGGTAGATTCTGACGGAAAAACCCCAAGGTaGCCTTCAGGATCAAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: PTAALLECSVLETLVDSDGKTPR*PSGSRQ Trigger: CTGTCTTGATCCTGAAGGTCACCTTGGGGTTTTTCC...GTCAGAATCTACCAAAGTTTCCAAAACTGAGCACTCCAGAAGCGCAGCAGTTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR TCA 90 bp | AGAACTGCAGTTACTATAACCAAAAACCAACTGCTGCGCTTCTGGAGTGCTCAGGGCCTTGTGCTTGGATaGCTTCTTGGCCTGTACCAA | + |
|
Preference number: 4 (lower is better) Translates to: RTAVTITKNQLLRFWSAQGLVLG*LLGLYQ Trigger: TTGGTACAGGCCAAGAAGTCATCCAAGCACAAGGCC...CTGAGCACTCCAGAAGCGCAGCAGTTGGTTTTTGGTTATAGTAACTGCAGTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR TCA 90 bp | TGTACAAAGCCTGTGTTTCCTGTAGTGTTCCCAAACTCCCCATCACAAACCACATACCCTCTCTCCTTGTaGATGAAACCCACTGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: CTKPVFPVVFPNSPSQTTYPLSL*MKPTGP Trigger: AGGCCCAGTGGGTTTCATTCACAAGGAGAGAGGGTA...TGTGGTTTGTGATGGGGAGTTTGGGAACACTACAGGAAACACAGGCTTTGTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
||
| CDS-3UTR GCA 90 bp | AGAACTGCAGTTACTATAACCAAAAACCAACTGCTGCGCTTCTGGAGTGCTCAGACAGGATTTCTGGGGTaGAGAGCACAGCTGCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: RTAVTITKNQLLRFWSAQTGFLG*RAQLPS Trigger: TGATGGCAGCTGTGCTCTGCACCCCAGAAATCCTGT...CTGAGCACTCCAGAAGCGCAGCAGTTGGTTTTTGGTTATAGTAACTGCAGTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR GCA 90 bp | GAGGTAGCAGGGAGCCTCAGAAGGAAAGGCCATGTCACTGGCAAAGAGATGGGAACAACTGTGGAAGAATaGAATAGTCTGAGTAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: EVAGSLRRKGHVTGKEMGTTVEE*NSLSNL Trigger: CAGGTTACTCAGACTATTGCATTCTTCCACAGTTGT...TCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCTGAGGCTCCCTGCTACCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR TCA 90 bp | AGAAGGAAAGGCCATGTCACTGGCAAAGAGATGGGAGAACCTGCAGCAAGTGCCGGCTTGCAAACTGCCTaGCATTATTTTTCTTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: RRKGHVTGKEMGEPAASAGLQTA*HYFSYR Trigger: TCTGTAAGAAAAATAATGTCAGGCAGTTTGCAAGCC...GGCACTTGCTGCAGGTTCTCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR GCA 90 bp | AGAAGGAAAGGCCATGTCACTGGCAAAGAGATGGGAGAACCTGCAGCAAGTGCCAGTTCATCTTGTACATaGTGTTCACAACCTTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: RRKGHVTGKEMGEPAASASSSCT*CSQPCT Trigger: TGTGCAAGGTTGTGAACAGCATGTACAAGATGAACT...GGCACTTGCTGCAGGTTCTCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR GCA 90 bp | ACAGTGGTTCTCCCTGGCTCAAGAGAGATCAAAGAGATCAATCAGAATGGCATTGGTGCAGAGCACAGCTaGCATCACCCAGATGGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: TVVLPGSREIKEINQNGIGAEHS*HHPDGN Trigger: ATTACCATCTGGGTGATGGCAGCTGTGCTCTGCACC...AATGCCATTCTGATTGATCTCTTTGATCTCTCTTGAGCCAGGGAGAACCACTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR CCA 90 bp | GGGACAGTGGTTCTCCCTGGCTCAAGAGAGATCAAAGAGATCAATCAGAATGGCTCATGGCCTGTACAATaGCAATGTATCTGTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: GTVVLPGSREIKEINQNGSWPVQ*QCICPH Trigger: GTGTGGACAGATACATTGCCATTGTACAGGCCATGA...GCCATTCTGATTGATCTCTTTGATCTCTCTTGAGCCAGGGAGAACCACTGTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR CCA 90 bp | GAAACCCACACCAGGCCCAGTCTCACTCTACTGCATATCTGTGGATCAAGCATATCATGGCCTGTACAATaGCAATGTATCTGTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: ETHTRPSLTLLHICGSSISWPVQ*QCICPH Trigger: GTGTGGACAGATACATTGCCATTGTACAGGCCATGA...TATGCTTGATCCACAGATATGCAGTAGAGTGAGACTGGGCCTGGTGTGGGTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
||
| CDS-3UTR CCA 90 bp | CCAACTGCTGCGCTTCTGGAGTGCTCAGTTTTGGAAACTTTGGTAGATTCTGACCCTGCACTACAAGAATaGAGTTGTAGGGGAACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PTAALLECSVLETLVDSDPALQE*SCRGTE Trigger: CTCAGTTCCCCTACAACTCCATTCTTGTAGTGCAGG...GTCAGAATCTACCAAAGTTTCCAAAACTGAGCACTCCAGAAGCGCAGCAGTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR CCA 90 bp | TCCTCTGGAACTGGAGTTGAAGACAGTTTTGAGCTGCCATGTAGGTGTTGGGAACCTGCACTACAAGAATaGAGTTGTAGGGGAACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSGTGVEDSFELPCRCWEPALQE*SCRGTE Trigger: CTCAGTTCCCCTACAACTCCATTCTTGTAGTGCAGG...TTCCCAACACCTACATGGCAGCTCAAAACTGTCTTCAACTCCAGTTCCAGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR CCA 90 bp | TCTTTATTGCTTACTTCTCAGGAAGACCCCGAACCCAGAAAATGGTGCTGCTTAGTGAATGAAACCCACTaGGCCTGGCTAATGCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: SLLLTSQEDPEPRKWCCLVNETH*AWLMHP Trigger: GGGATGCATTAGCCAGGCCCAGTGGGTTTCATTCAC...TAAGCAGCACCATTTTCTGGGTTCGGGGTCTTCCTGAGAAGTAAGCAATAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166236.9 |
||
| CDS-3UTR TCA 90 bp | TCCTCTGGAACTGGAGTTGAAGACAGTTTTGAGCTGCCATGTAGGTGTTGGGAATCACAACCTTGCACATaGAGGTCTGGAACATCCATT | + |
|
Preference number: 4 (lower is better) Translates to: SSGTGVEDSFELPCRCWESQPCT*RSGTSI Trigger: AATGGATGTTCCAGACCTTCATGTGCAAGGTTGTGA...TTCCCAACACCTACATGGCAGCTCAAAACTGTCTTCAACTCCAGTTCCAGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR TCA 90 bp | CCAACTGCTGCGCTTCTGGAGTGCTCAGTTTTGGAAACTTTGGTAGATTCTGACTCACAACCTTGCACATaGAGGTCTGGAACATCCATT | + |
|
Preference number: 4 (lower is better) Translates to: PTAALLECSVLETLVDSDSQPCT*RSGTSI Trigger: AATGGATGTTCCAGACCTTCATGTGCAAGGTTGTGA...GTCAGAATCTACCAAAGTTTCCAAAACTGAGCACTCCAGAAGCGCAGCAGTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR TCA 90 bp | AGAACTGCAGTTACTATAACCAAAAACCAACTGCTGCGCTTCTGGAGTGCTCAGCAGTGGAGTCATAGCTaGAGTCATCAAACATGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RTAVTITKNQLLRFWSAQQWSHS*SHQTCQ Trigger: CTGGCATGTTTGATGACTTCAGCTATGACTCCACTG...CTGAGCACTCCAGAAGCGCAGCAGTTGGTTTTTGGTTATAGTAACTGCAGTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR GCA 90 bp | GCCCAGTCTCACTCTACTGCATATCTGTGGATCAAGCATAAGCTCTCAGCGCCAACAACTGTGGAAGAATaGAATAGTCTGAGTAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: AQSHSTAYLWIKHKLSAPTTVEE*NSLSNL Trigger: CAGGTTACTCAGACTATTGCATTCTTCCACAGTTGT...TGGCGCTGAGAGCTTATGCTTGATCCACAGATATGCAGTAGAGTGAGACTGGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
||
| CDS-3UTR CCA 90 bp | CCAACTGCTGCGCTTCTGGAGTGCTCAGTTTTGGAAACTTTGGTAGATTCTGACTCATGTAGTCATCTGTaGAAGCAGTGGAGTCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: PTAALLECSVLETLVDSDSCSHL*KQWSHS Trigger: GCTATGACTCCACTGCTTCCACAGATGACTACATGA...GTCAGAATCTACCAAAGTTTCCAAAACTGAGCACTCCAGAAGCGCAGCAGTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR CCA 90 bp | TCTCACTCTACTGCATATCTGTGGATCAAGCATAAGCTCTCAGCGCCATCCTTGTCATGTAGTCATCTGTaGAAGCAGTGGAGTCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: SHSTAYLWIKHKLSAPSLSCSHL*KQWSHS Trigger: GCTATGACTCCACTGCTTCCACAGATGACTACATGA...CAAGGATGGCGCTGAGAGCTTATGCTTGATCCACAGATATGCAGTAGAGTGAGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
||
| CDS-3UTR CCA 90 bp | TCCTCTGGAACTGGAGTTGAAGACAGTTTTGAGCTGCCATGTAGGTGTTGGGAATCATGTAGTCATCTGTaGAAGCAGTGGAGTCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSGTGVEDSFELPCRCWESCSHL*KQWSHS Trigger: GCTATGACTCCACTGCTTCCACAGATGACTACATGA...TTCCCAACACCTACATGGCAGCTCAAAACTGTCTTCAACTCCAGTTCCAGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR CCA 90 bp | CCAACTGCTGCGCTTCTGGAGTGCTCAGTTTTGGAAACTTTGGTAGATTCTGACTCATGGCCTGTACAATaGCAATGTATCTGTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: PTAALLECSVLETLVDSDSWPVQ*QCICPH Trigger: GTGTGGACAGATACATTGCCATTGTACAGGCCATGA...GTCAGAATCTACCAAAGTTTCCAAAACTGAGCACTCCAGAAGCGCAGCAGTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR CCA 90 bp | TGTACAAAGCCTGTGTTTCCTGTAGTGTTCCCAAACTCCCCATCACAAACCACACCTGCACTACAAGAATaGAGTTGTAGGGGAACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: CTKPVFPVVFPNSPSQTTPALQE*SCRGTE Trigger: CTCAGTTCCCCTACAACTCCATTCTTGTAGTGCAGG...TGTGGTTTGTGATGGGGAGTTTGGGAACACTACAGGAAACACAGGCTTTGTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
||
| 3UTR CAA 72 bp | TCCCGGGTTTTGGCACCACTTTGTCCTTGTAACATTTaGCCAGCAAAACACACTTGGACAACCAGATCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SRVLAPLCPCNI*PAKHTWTTRSF Trigger: GAAGGATCTGGTTGTCCAAGTGTGTTTTGCTGGCAAAATGTTACAAGGACAAAGTGGTGCCAAAACCCGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166236.9 |
||
| CDS-3UTR TCA 90 bp | AGAACTGCAGTTACTATAACCAAAAACCAACTGCTGCGCTTCTGGAGTGCTCAGTCACAACCTTGCACATaGAGGTCTGGAACATCCATT | + |
|
Preference number: 4 (lower is better) Translates to: RTAVTITKNQLLRFWSAQSQPCT*RSGTSI Trigger: AATGGATGTTCCAGACCTTCATGTGCAAGGTTGTGA...CTGAGCACTCCAGAAGCGCAGCAGTTGGTTTTTGGTTATAGTAACTGCAGTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR GCA 90 bp | TCCTCTGGAACTGGAGTTGAAGACAGTTTTGAGCTGCCATGTAGGTGTTGGGAATGGTCTTCACTCTTGTaGAATACCAGTAGACAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSGTGVEDSFELPCRCWEWSSLL*NTSRQG Trigger: TCCTTGTCTACTGGTATTGCACAAGAGTGAAGACCA...TTCCCAACACCTACATGGCAGCTCAAAACTGTCTTCAACTCCAGTTCCAGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR GCA 90 bp | TGTTTCAGAAACCCACACCAGGCCCAGTCTCACTCTACTGCATATCTGTGGATCAGTTCATCTTGTACATaGTGTTCACAACCTTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: CFRNPHQAQSHSTAYLWISSSCT*CSQPCT Trigger: TGTGCAAGGTTGTGAACAGCATGTACAAGATGAACT...GATCCACAGATATGCAGTAGAGTGAGACTGGGCCTGGTGTGGGTTTCTGAAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
||
| CDS-3UTR GCA 90 bp | CTTTCACAACGGCATGATTTTTGCTTTAAGTTTGTTGTTCTCTTGCTCCCCAACACAGGATTTCTGGGGTaGAGAGCACAGCTGCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: LSQRHDFCFKFVVLLLPNTGFLG*RAQLPS Trigger: TGATGGCAGCTGTGCTCTGCACCCCAGAAATCCTGT...GTTGGGGAGCAAGAGAACAACAAACTTAAAGCAAAAATCATGCCGTTGTGAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000166236.9 |
||
| CDS-3UTR GCA 90 bp | TGTTTCAGAAACCCACACCAGGCCCAGTCTCACTCTACTGCATATCTGTGGATCACAACTGTGGAAGAATaGAATAGTCTGAGTAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: CFRNPHQAQSHSTAYLWITTVEE*NSLSNL Trigger: CAGGTTACTCAGACTATTGCATTCTTCCACAGTTGT...GATCCACAGATATGCAGTAGAGTGAGACTGGGCCTGGTGTGGGTTTCTGAAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
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| CDS-3UTR CCA 90 bp | CCAACTGCTGCGCTTCTGGAGTGCTCAGTTTTGGAAACTTTGGTAGATTCTGACGGAACATGTCAGTCATaGTCTTCACTCTTGTGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: PTAALLECSVLETLVDSDGTCQS*SSLLCN Trigger: ATTGCACAAGAGTGAAGACCATGACTGACATGTTCC...GTCAGAATCTACCAAAGTTTCCAAAACTGAGCACTCCAGAAGCGCAGCAGTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR CCA 90 bp | TCCTCTGGAACTGGAGTTGAAGACAGTTTTGAGCTGCCATGTAGGTGTTGGGAAGGAACATGTCAGTCATaGTCTTCACTCTTGTGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SSGTGVEDSFELPCRCWEGTCQS*SSLLCN Trigger: ATTGCACAAGAGTGAAGACCATGACTGACATGTTCC...TTCCCAACACCTACATGGCAGCTCAAAACTGTCTTCAACTCCAGTTCCAGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR TCA 90 bp | CCAACTGCTGCGCTTCTGGAGTGCTCAGTTTTGGAAACTTTGGTAGATTCTGACGGCTTGCAAACTGCCTaGCATTATTTTTCTTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: PTAALLECSVLETLVDSDGLQTA*HYFSYR Trigger: TCTGTAAGAAAAATAATGTCAGGCAGTTTGCAAGCC...GTCAGAATCTACCAAAGTTTCCAAAACTGAGCACTCCAGAAGCGCAGCAGTTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR TCA 90 bp | ACAGTGGTTCTCCCTGGCTCAAGAGAGATCAAAGAGATCAATCAGAATGGCATTTCACAACCTTGCACATaGAGGTCTGGAACATCCATT | + |
|
Preference number: 4 (lower is better) Translates to: TVVLPGSREIKEINQNGISQPCT*RSGTSI Trigger: AATGGATGTTCCAGACCTTCATGTGCAAGGTTGTGA...AATGCCATTCTGATTGATCTCTTTGATCTCTCTTGAGCCAGGGAGAACCACTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR GCA 90 bp | TCCTCTGGAACTGGAGTTGAAGACAGTTTTGAGCTGCCATGTAGGTGTTGGGAAAGTTCATCTTGTACATaGTGTTCACAACCTTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: SSGTGVEDSFELPCRCWESSSCT*CSQPCT Trigger: TGTGCAAGGTTGTGAACAGCATGTACAAGATGAACT...TTCCCAACACCTACATGGCAGCTCAAAACTGTCTTCAACTCCAGTTCCAGAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| CDS-3UTR GCA 90 bp | CCAACTGCTGCGCTTCTGGAGTGCTCAGTTTTGGAAACTTTGGTAGATTCTGACACAACTGTGGAAGAATaGAATAGTCTGAGTAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: PTAALLECSVLETLVDSDTTVEE*NSLSNL Trigger: CAGGTTACTCAGACTATTGCATTCTTCCACAGTTGT...GTCAGAATCTACCAAAGTTTCCAAAACTGAGCACTCCAGAAGCGCAGCAGTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| 3UTR CAA 72 bp | GATTCAGATGTCTCTGACCTTATACTGACCTTGGTTTaGGAAGCCGTGCTTGTCATATTTGGGGCTCACTTA | + |
|
Preference number: 4 (lower is better) Translates to: DSDVSDLILTLV*EAVLVIFGAHL Trigger: TAAGTGAGCCCCAAATATGACAAGCACGGCTTCCAAAACCAAGGTCAGTATAAGGTCAGAGACATCTGAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
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| 3UTR CAA 72 bp | GTCAATGATTCAGATGTCTCTGACCTTATACTGACCTaGGTTTTGGAAGCCGTGCTTGTCATATTTGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VNDSDVSDLILT*VLEAVLVIFGA Trigger: AGCCCCAAATATGACAAGCACGGCTTCCAAAACCAAGGTCAGTATAAGGTCAGAGACATCTGAATCATTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
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| CDS-3UTR TCA 90 bp | TGTACAAAGCCTGTGTTTCCTGTAGTGTTCCCAAACTCCCCATCACAAACCACAGGCTTGCAAACTGCCTaGCATTATTTTTCTTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: CTKPVFPVVFPNSPSQTTGLQTA*HYFSYR Trigger: TCTGTAAGAAAAATAATGTCAGGCAGTTTGCAAGCC...TGTGGTTTGTGATGGGGAGTTTGGGAACACTACAGGAAACACAGGCTTTGTACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
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| CDS-3UTR TCA 90 bp | ACCATGCCCAACCTACCAGTTCTTCTTAATCTAAAATTTAAAGGTTGTAAACTGTTCTGCCTCCAGACCTaGGCCTTCATGGCCTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: TMPNLPVLLNLKFKGCKLFCLQT*AFMACT Trigger: TGTACAGGCCATGAAGGCTCAGGTCTGGAGGCAGAA...CAGTTTACAACCTTTAAATTTTAGATTAAGAAGAACTGGTAGGTTGGGCATGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| CDS-3UTR GCA 90 bp | AGAACTGCAGTTACTATAACCAAAAACCAACTGCTGCGCTTCTGGAGTGCTCAGAGTTCATCTTGTACATaGTGTTCACAACCTTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: RTAVTITKNQLLRFWSAQSSSCT*CSQPCT Trigger: TGTGCAAGGTTGTGAACAGCATGTACAAGATGAACT...CTGAGCACTCCAGAAGCGCAGCAGTTGGTTTTTGGTTATAGTAACTGCAGTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| CDS-3UTR TCA 90 bp | ACCATGCCCAACCTACCAGTTCTTCTTAATCTAAAATTTAAAGGTTGTAAACTGCCAAGGTGCCCACAATaGACACAAGCCAGTACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TMPNLPVLLNLKFKGCKLPRCPQ*TQASTE Trigger: CTCTGTACTGGCTTGTGTTCATTGTGGGCACCTTGG...CAGTTTACAACCTTTAAATTTTAGATTAAGAAGAACTGGTAGGTTGGGCATGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| CDS-3UTR TCA 90 bp | ACCATGCCCAACCTACCAGTTCTTCTTAATCTAAAATTTAAAGGTTGTAAACTGGGCCTTGTGCTTGGATaGCTTCTTGGCCTGTACCAA | + |
|
Preference number: 4 (lower is better) Translates to: TMPNLPVLLNLKFKGCKLGLVLG*LLGLYQ Trigger: TTGGTACAGGCCAAGAAGTCATCCAAGCACAAGGCC...CAGTTTACAACCTTTAAATTTTAGATTAAGAAGAACTGGTAGGTTGGGCATGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR GCA 90 bp | GGTGGGGTAAAGATTTACCAGCCTTACCTTTTACAATTACTGTATTTCTATCTAACAGGATTTCTGGGGTaGAGAGCACAGCTGCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: GGVKIYQPYLLQLLYFYLTGFLG*RAQLPS Trigger: TGATGGCAGCTGTGCTCTGCACCCCAGAAATCCTGT...TAGATAGAAATACAGTAATTGTAAAAGGTAAGGCTGGTAAATCTTTACCCCACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
||
| CDS-3UTR CCA 90 bp | CTTTCACAACGGCATGATTTTTGCTTTAAGTTTGTTGTTCTCTTGCTCCCCAACTCATGGCCTGTACAATaGCAATGTATCTGTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: LSQRHDFCFKFVVLLLPNSWPVQ*QCICPH Trigger: GTGTGGACAGATACATTGCCATTGTACAGGCCATGA...GTTGGGGAGCAAGAGAACAACAAACTTAAAGCAAAAATCATGCCGTTGTGAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166236.9 |
||
| CDS-3UTR TCA 90 bp | ACCATGCCCAACCTACCAGTTCTTCTTAATCTAAAATTTAAAGGTTGTAAACTGTCACAACCTTGCACATaGAGGTCTGGAACATCCATT | + |
|
Preference number: 4 (lower is better) Translates to: TMPNLPVLLNLKFKGCKLSQPCT*RSGTSI Trigger: AATGGATGTTCCAGACCTTCATGTGCAAGGTTGTGA...CAGTTTACAACCTTTAAATTTTAGATTAAGAAGAACTGGTAGGTTGGGCATGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR CCA 90 bp | ACCATGCCCAACCTACCAGTTCTTCTTAATCTAAAATTTAAAGGTTGTAAACTGTCATGTAGTCATCTGTaGAAGCAGTGGAGTCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: TMPNLPVLLNLKFKGCKLSCSHL*KQWSHS Trigger: GCTATGACTCCACTGCTTCCACAGATGACTACATGA...CAGTTTACAACCTTTAAATTTTAGATTAAGAAGAACTGGTAGGTTGGGCATGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR CCA 90 bp | ACCATGCCCAACCTACCAGTTCTTCTTAATCTAAAATTTAAAGGTTGTAAACTGAGAGGTGGAAGAAAATaGCTTGCAAACTGCCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: TMPNLPVLLNLKFKGCKLRGGRK*LANCLT Trigger: TGTCAGGCAGTTTGCAAGCCATTTTCTTCCACCTCT...CAGTTTACAACCTTTAAATTTTAGATTAAGAAGAACTGGTAGGTTGGGCATGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR GCA 90 bp | ACCATGCCCAACCTACCAGTTCTTCTTAATCTAAAATTTAAAGGTTGTAAACTGTGGTCTTCACTCTTGTaGAATACCAGTAGACAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TMPNLPVLLNLKFKGCKLWSSLL*NTSRQG Trigger: TCCTTGTCTACTGGTATTGCACAAGAGTGAAGACCA...CAGTTTACAACCTTTAAATTTTAGATTAAGAAGAACTGGTAGGTTGGGCATGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR GCA 90 bp | GGTGGGGTAAAGATTTACCAGCCTTACCTTTTACAATTACTGTATTTCTATCTATGGTCTTCACTCTTGTaGAATACCAGTAGACAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GGVKIYQPYLLQLLYFYLWSSLL*NTSRQG Trigger: TCCTTGTCTACTGGTATTGCACAAGAGTGAAGACCA...TAGATAGAAATACAGTAATTGTAAAAGGTAAGGCTGGTAAATCTTTACCCCACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
||
| CDS-3UTR GCA 90 bp | ACCATGCCCAACCTACCAGTTCTTCTTAATCTAAAATTTAAAGGTTGTAAACTGAGTTCATCTTGTACATaGTGTTCACAACCTTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: TMPNLPVLLNLKFKGCKLSSSCT*CSQPCT Trigger: TGTGCAAGGTTGTGAACAGCATGTACAAGATGAACT...CAGTTTACAACCTTTAAATTTTAGATTAAGAAGAACTGGTAGGTTGGGCATGGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS-3UTR CAA 90 bp | CAGGGAGCCTCAGAAGGAAAGGCCATGTCACTGGCAAAGAGATGGGAGAACCTGACAGTGATGGTCACCTaGAGGGCCTTGTGCTTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: QGASEGKAMSLAKRWENLTVMVT*RALCLD Trigger: ATCCAAGCACAAGGCCCTCAAGGTGACCATCACTGT...CAGGTTCTCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCTGAGGCTCCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS CCA 90 bp | TGTGGCAATACCAGATTCCCCACTGACTTGACTGTACAGGATTTCTaGGGTGCAGAGCACAGCTGCCATCACCCAGATGGTAATGCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: CGNTRFPTDLTVQDF*GAEHSCHHPDGNAD Trigger: GTCTGCATTACCATCTGGGTGATGGCAGCTGTGCTCTGCACCCCAGAAATCCTGTACAGTCAAGTCAGTGGGGAATCTGGTATTGCCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
||
| CDS CCA 90 bp | AGCTTCAAGCTACCCTCTCTCCTTGTGAATGAAACCCACTGGGCCTaGCTAATGCATCCCAGGTTCTTCAGGGTCTTCACCAGATCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SFKLPSLLVNETHWA*LMHPRFFRVFTRSL Trigger: AAGGGATCTGGTGAAGACCCTGAAGAACCTGGGATGCATTAGCCAGGCCCAGTGGGTTTCATTCACAAGGAGAGAGGGTAGCTTGAAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| CDS-3UTR CAA 90 bp | CAGGGAGCCTCAGAAGGAAAGGCCATGTCACTGGCAAAGAGATGGGAGAACCTGATGCTGTTCACAACCTaGCACATGAAGGTCTGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: QGASEGKAMSLAKRWENLMLFTT*HMKVWN Trigger: GTTCCAGACCTTCATGTGCAAGGTTGTGAACAGCAT...CAGGTTCTCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCTGAGGCTCCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| CDS-3UTR CAA 90 bp | GCCCAGTCTCACTCTACTGCATATCTGTGGATCAAGCATAAGCTCTCAGCGCCATTGAGGGCCTTGTGCTaGGATGACTTCTTGGCCTGT | + |
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Preference number: 5 (lower is better) Translates to: AQSHSTAYLWIKHKLSAPLRALC*DDFLAC Trigger: ACAGGCCAAGAAGTCATCCAAGCACAAGGCCCTCAA...TGGCGCTGAGAGCTTATGCTTGATCCACAGATATGCAGTAGAGTGAGACTGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
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| CDS-3UTR CAA 90 bp | CTCTGCCTCCAAAACCCAGCTGCACTGATGATCAGCATGTGCAAGGCTGGGCTGTCATGGTCTTCACTCTaGTGCAATACCAGTAGACAA | + |
|
Preference number: 5 (lower is better) Translates to: LCLQNPAALMISMCKAGLSWSSL*CNTSRQ Trigger: TTGTCTACTGGTATTGCACAAGAGTGAAGACCATGA...CAGCCCAGCCTTGCACATGCTGATCATCAGTGCAGCTGGGTTTTGGAGGCAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| CDS-3UTR CAA 90 bp | TGTTTCAGAAACCCACACCAGGCCCAGTCTCACTCTACTGCATATCTGTGGATCTTGAGGGCCTTGTGCTaGGATGACTTCTTGGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: CFRNPHQAQSHSTAYLWILRALC*DDFLAC Trigger: ACAGGCCAAGAAGTCATCCAAGCACAAGGCCCTCAA...GATCCACAGATATGCAGTAGAGTGAGACTGGGCCTGGTGTGGGTTTCTGAAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
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| CDS TCA 90 bp | TACATGCTGTTCACAACCTTGCACATGAAGGTCTGGAACATCCATTaGCCAGCAGCAGCAATGGCCCAGAAGGGAAGAGTGGCAAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: YMLFTTLHMKVWNIH*PAAAMAQKGRVARK Trigger: CTTTCTTGCCACTCTTCCCTTCTGGGCCATTGCTGCTGCTGGTCAATGGATGTTCCAGACCTTCATGTGCAAGGTTGTGAACAGCATGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| CDS-3UTR CAA 90 bp | GAGGTAGCAGGGAGCCTCAGAAGGAAAGGCCATGTCACTGGCAAAGAGATGGGATCATGGTCTTCACTCTaGTGCAATACCAGTAGACAA | + |
|
Preference number: 5 (lower is better) Translates to: EVAGSLRRKGHVTGKEMGSWSSL*CNTSRQ Trigger: TTGTCTACTGGTATTGCACAAGAGTGAAGACCATGA...TCCCATCTCTTTGCCAGTGACATGGCCTTTCCTTCTGAGGCTCCCTGCTACCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| CDS-3UTR CAA 90 bp | TCCTCTGGAACTGGAGTTGAAGACAGTTTTGAGCTGCCATGTAGGTGTTGGGAATTGAGGGCCTTGTGCTaGGATGACTTCTTGGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SSGTGVEDSFELPCRCWELRALC*DDFLAC Trigger: ACAGGCCAAGAAGTCATCCAAGCACAAGGCCCTCAA...TTCCCAACACCTACATGGCAGCTCAAAACTGTCTTCAACTCCAGTTCCAGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| CDS-3UTR CAA 90 bp | CCAACTGCTGCGCTTCTGGAGTGCTCAGTTTTGGAAACTTTGGTAGATTCTGACTTGAGGGCCTTGTGCTaGGATGACTTCTTGGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PTAALLECSVLETLVDSDLRALC*DDFLAC Trigger: ACAGGCCAAGAAGTCATCCAAGCACAAGGCCCTCAA...GTCAGAATCTACCAAAGTTTCCAAAACTGAGCACTCCAGAAGCGCAGCAGTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| CDS-3UTR CAA 90 bp | CCAACTGCTGCGCTTCTGGAGTGCTCAGTTTTGGAAACTTTGGTAGATTCTGACACAGTGATGGTCACCTaGAGGGCCTTGTGCTTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: PTAALLECSVLETLVDSDTVMVT*RALCLD Trigger: ATCCAAGCACAAGGCCCTCAAGGTGACCATCACTGT...GTCAGAATCTACCAAAGTTTCCAAAACTGAGCACTCCAGAAGCGCAGCAGTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| CDS-3UTR CAA 90 bp | TCCTCTGGAACTGGAGTTGAAGACAGTTTTGAGCTGCCATGTAGGTGTTGGGAAACAGTGATGGTCACCTaGAGGGCCTTGTGCTTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SSGTGVEDSFELPCRCWETVMVT*RALCLD Trigger: ATCCAAGCACAAGGCCCTCAAGGTGACCATCACTGT...TTCCCAACACCTACATGGCAGCTCAAAACTGTCTTCAACTCCAGTTCCAGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| CDS TCA 90 bp | GACAGTGAGGACAGTGATGGTCACCTTGAGGGCCTTGTGCTTGGATaGCTTCTTGGCCTGTACCAAGGTATGAATGATGATGGTATAGCA | + |
|
Preference number: 5 (lower is better) Translates to: DSEDSDGHLEGLVLG*LLGLYQGMNDDGIA Trigger: TGCTATACCATCATCATTCATACCTTGGTACAGGCCAAGAAGTCATCCAAGCACAAGGCCCTCAAGGTGACCATCACTGTCCTCACTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| CDS-3UTR CAA 90 bp | GGGACAGTGGTTCTCCCTGGCTCAAGAGAGATCAAAGAGATCAATCAGAATGGCATGCTGTTCACAACCTaGCACATGAAGGTCTGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: GTVVLPGSREIKEINQNGMLFTT*HMKVWN Trigger: GTTCCAGACCTTCATGTGCAAGGTTGTGAACAGCAT...GCCATTCTGATTGATCTCTTTGATCTCTCTTGAGCCAGGGAGAACCACTGTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| CDS-3UTR CAA 90 bp | TGTACAAAGCCTGTGTTTCCTGTAGTGTTCCCAAACTCCCCATCACAAACCACAACAGTGATGGTCACCTaGAGGGCCTTGTGCTTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: CTKPVFPVVFPNSPSQTTTVMVT*RALCLD Trigger: ATCCAAGCACAAGGCCCTCAAGGTGACCATCACTGT...TGTGGTTTGTGATGGGGAGTTTGGGAACACTACAGGAAACACAGGCTTTGTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
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| CDS TCA 90 bp | AGCTGTAGAAGTTCATCTTGTACATGCTGTTCACAACCTTGCACATaGAGGTCTGGAACATCCATTGACCAGCAGCAGCAATGGCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SCRSSSCTCCSQPCT*RSGTSIDQQQQWPR Trigger: TCTGGGCCATTGCTGCTGCTGGTCAATGGATGTTCCAGACCTTCATGTGCAAGGTTGTGAACAGCATGTACAAGATGAACTTCTACAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| CDS-3UTR CAA 90 bp | CCAACTGCTGCGCTTCTGGAGTGCTCAGTTTTGGAAACTTTGGTAGATTCTGACATGCTGTTCACAACCTaGCACATGAAGGTCTGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: PTAALLECSVLETLVDSDMLFTT*HMKVWN Trigger: GTTCCAGACCTTCATGTGCAAGGTTGTGAACAGCAT...GTCAGAATCTACCAAAGTTTCCAAAACTGAGCACTCCAGAAGCGCAGCAGTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| CDS-3UTR CAA 90 bp | GGGACAGTGGTTCTCCCTGGCTCAAGAGAGATCAAAGAGATCAATCAGAATGGCACAGCTGACTTTAGCTaGGCATTCTTATCCTTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GTVVLPGSREIKEINQNGTADFS*AFLSLG Trigger: CCCTAAGGATAAGAATGCCAAGCTAAAGTCAGCTGT...GCCATTCTGATTGATCTCTTTGATCTCTCTTGAGCCAGGGAGAACCACTGTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| CDS-3UTR CAA 90 bp | ACAGTGGTTCTCCCTGGCTCAAGAGAGATCAAAGAGATCAATCAGAATGGCATTTTGAGGGCCTTGTGCTaGGATGACTTCTTGGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: TVVLPGSREIKEINQNGILRALC*DDFLAC Trigger: ACAGGCCAAGAAGTCATCCAAGCACAAGGCCCTCAA...AATGCCATTCTGATTGATCTCTTTGATCTCTCTTGAGCCAGGGAGAACCACTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| CDS-3UTR CAA 90 bp | TGTACAAAGCCTGTGTTTCCTGTAGTGTTCCCAAACTCCCCATCACAAACCACAATGCTGTTCACAACCTaGCACATGAAGGTCTGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: CTKPVFPVVFPNSPSQTTMLFTT*HMKVWN Trigger: GTTCCAGACCTTCATGTGCAAGGTTGTGAACAGCAT...TGTGGTTTGTGATGGGGAGTTTGGGAACACTACAGGAAACACAGGCTTTGTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
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| CDS-3UTR CAA 90 bp | TCTCACTCTACTGCATATCTGTGGATCAAGCATAAGCTCTCAGCGCCATCCTTGACAGCTGACTTTAGCTaGGCATTCTTATCCTTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SHSTAYLWIKHKLSAPSLTADFS*AFLSLG Trigger: CCCTAAGGATAAGAATGCCAAGCTAAAGTCAGCTGT...CAAGGATGGCGCTGAGAGCTTATGCTTGATCCACAGATATGCAGTAGAGTGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
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| CDS CCA 90 bp | GCTGTTGCCCAAGGTGCCCACAATGAACACAAGCCAGTACAGAGGTaGAAGAAAATGGCTTGCAAACTGCCTGACATTATTTTTCTTACA | + |
|
Preference number: 5 (lower is better) Translates to: AVAQGAHNEHKPVQR*KKMACKLPDIIFLT Trigger: TGTAAGAAAAATAATGTCAGGCAGTTTGCAAGCCATTTTCTTCCACCTCTGTACTGGCTTGTGTTCATTGTGGGCACCTTGGGCAACAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| CDS-3UTR CAA 90 bp | CCAACTGCTGCGCTTCTGGAGTGCTCAGTTTTGGAAACTTTGGTAGATTCTGACTCATGGTCTTCACTCTaGTGCAATACCAGTAGACAA | + |
|
Preference number: 5 (lower is better) Translates to: PTAALLECSVLETLVDSDSWSSL*CNTSRQ Trigger: TTGTCTACTGGTATTGCACAAGAGTGAAGACCATGA...GTCAGAATCTACCAAAGTTTCCAAAACTGAGCACTCCAGAAGCGCAGCAGTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| CDS-3UTR CAA 90 bp | AGAACTGCAGTTACTATAACCAAAAACCAACTGCTGCGCTTCTGGAGTGCTCAGACAGCTGACTTTAGCTaGGCATTCTTATCCTTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RTAVTITKNQLLRFWSAQTADFS*AFLSLG Trigger: CCCTAAGGATAAGAATGCCAAGCTAAAGTCAGCTGT...CTGAGCACTCCAGAAGCGCAGCAGTTGGTTTTTGGTTATAGTAACTGCAGTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| CDS-3UTR CAA 90 bp | AGAACTGCAGTTACTATAACCAAAAACCAACTGCTGCGCTTCTGGAGTGCTCAGTCATGGTCTTCACTCTaGTGCAATACCAGTAGACAA | + |
|
Preference number: 5 (lower is better) Translates to: RTAVTITKNQLLRFWSAQSWSSL*CNTSRQ Trigger: TTGTCTACTGGTATTGCACAAGAGTGAAGACCATGA...CTGAGCACTCCAGAAGCGCAGCAGTTGGTTTTTGGTTATAGTAACTGCAGTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| CDS-3UTR CAA 90 bp | ACAGTGGTTCTCCCTGGCTCAAGAGAGATCAAAGAGATCAATCAGAATGGCATTACAGCTGACTTTAGCTaGGCATTCTTATCCTTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: TVVLPGSREIKEINQNGITADFS*AFLSLG Trigger: CCCTAAGGATAAGAATGCCAAGCTAAAGTCAGCTGT...AATGCCATTCTGATTGATCTCTTTGATCTCTCTTGAGCCAGGGAGAACCACTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| CDS-3UTR CAA 90 bp | ACCATGCCCAACCTACCAGTTCTTCTTAATCTAAAATTTAAAGGTTGTAAACTGGGTCTGGAACATCCATaGACCAGCAGCAGCAATGGC | + |
|
Preference number: 5 (lower is better) Translates to: TMPNLPVLLNLKFKGCKLGLEHP*TSSSNG Trigger: GCCATTGCTGCTGCTGGTCAATGGATGTTCCAGACC...CAGTTTACAACCTTTAAATTTTAGATTAAGAAGAACTGGTAGGTTGGGCATGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| CDS CCA 90 bp | AAGGTGCCCACAATGAACACAAGCCAGTACAGAGGTGGAAGAAAATaGCTTGCAAACTGCCTGACATTATTTTTCTTACAGAAGAAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: KVPTMNTSQYRGGRK*LANCLTLFFLQKKL Trigger: TAGCTTCTTCTGTAAGAAAAATAATGTCAGGCAGTTTGCAAGCCATTTTCTTCCACCTCTGTACTGGCTTGTGTTCATTGTGGGCACCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| CDS-3UTR CAA 90 bp | GGTGGGGTAAAGATTTACCAGCCTTACCTTTTACAATTACTGTATTTCTATCTAACAGTGATGGTCACCTaGAGGGCCTTGTGCTTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: GGVKIYQPYLLQLLYFYLTVMVT*RALCLD Trigger: ATCCAAGCACAAGGCCCTCAAGGTGACCATCACTGT...TAGATAGAAATACAGTAATTGTAAAAGGTAAGGCTGGTAAATCTTTACCCCACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166236.9 ENSMUST00000180093.2 |
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| CDS CCA 72 bp | ACCAGATTCCCCACTGACTTGACTGTACAGGATTTCTaGGGTGCAGAGCACAGCTGCCATCACCCAGATGGT | + |
|
Preference number: 6 (lower is better) Translates to: TRFPTDLTVQDF*GAEHSCHHPDG Trigger: ACCATCTGGGTGATGGCAGCTGTGCTCTGCACCCCAGAAATCCTGTACAGTCAAGTCAGTGGGGAATCTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| CDS CAA 90 bp | AGGGTAGACCATGGTACATGTGGCAATACCAGATTCCCCACTGACTaGACTGTACAGGATTTCTGGGGTGCAGAGCACAGCTGCCATCAC | + |
|
Preference number: 6 (lower is better) Translates to: RVDHGTCGNTRFPTD*TVQDFWGAEHSCHH Trigger: GTGATGGCAGCTGTGCTCTGCACCCCAGAAATCCTGTACAGTCAAGTCAGTGGGGAATCTGGTATTGCCACATGTACCATGGTCTACCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| CDS CAA 72 bp | GTTCACAACCTTGCACATGAAGGTCTGGAACATCCATaGACCAGCAGCAGCAATGGCCCAGAAGGGAAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: VHNLAHEGLEHP*TSSSNGPEGKS Trigger: ACTCTTCCCTTCTGGGCCATTGCTGCTGCTGGTCAATGGATGTTCCAGACCTTCATGTGCAAGGTTGTGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| CDS CAA 72 bp | CATGGTACATGTGGCAATACCAGATTCCCCACTGACTaGACTGTACAGGATTTCTGGGGTGCAGAGCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: HGTCGNTRFPTD*TVQDFWGAEHS Trigger: GCTGTGCTCTGCACCCCAGAAATCCTGTACAGTCAAGTCAGTGGGGAATCTGGTATTGCCACATGTACCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| CDS CAA 72 bp | AAGACAGTGAGGACAGTGATGGTCACCTTGAGGGCCTaGTGCTTGGATGACTTCTTGGCCTGTACCAAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: KTVRTVMVTLRA*CLDDFLACTKV Trigger: TACCTTGGTACAGGCCAAGAAGTCATCCAAGCACAAGGCCCTCAAGGTGACCATCACTGTCCTCACTGTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| CDS CAA 90 bp | GTACATGCTGTTCACAACCTTGCACATGAAGGTCTGGAACATCCATaGACCAGCAGCAGCAATGGCCCAGAAGGGAAGAGTGGCAAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: VHAVHNLAHEGLEHP*TSSSNGPEGKSGKK Trigger: TTTCTTGCCACTCTTCCCTTCTGGGCCATTGCTGCTGCTGGTCAATGGATGTTCCAGACCTTCATGTGCAAGGTTGTGAACAGCATGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| CDS TCA 72 bp | ATGGTACATGTGGCAATACCAGATTCCCCACTGACTTaGCTGTACAGGATTTCTGGGGTGCAGAGCACAGCT | + |
|
Preference number: 6 (lower is better) Translates to: MVHVAIPDSPLT*LYRISGVQSTA Trigger: AGCTGTGCTCTGCACCCCAGAAATCCTGTACAGTCAAGTCAGTGGGGAATCTGGTATTGCCACATGTACCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| CDS TCA 72 bp | AGACCATGGTACATGTGGCAATACCAGATTCCCCACTaGCTTGACTGTACAGGATTTCTGGGGTGCAGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: RPWYMWQYQIPH*LDCTGFLGCRA Trigger: TGCTCTGCACCCCAGAAATCCTGTACAGTCAAGTCAGTGGGGAATCTGGTATTGCCACATGTACCATGGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| CDS TCA 72 bp | ATCTTGCTGTATAGCAGCCTTTTCTGCCTCCAGACCTaGGCCTTCATGGCCTGTACAATGGCAATGTATCTG | + |
|
Preference number: 6 (lower is better) Translates to: ILLYSSLFCLQT*AFMACTMAMYL Trigger: CAGATACATTGCCATTGTACAGGCCATGAAGGCTCAGGTCTGGAGGCAGAAAAGGCTGCTATACAGCAAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| CDS TCA 72 bp | GACAGTGATGGTCACCTTGAGGGCCTTGTGCTTGGATaGCTTCTTGGCCTGTACCAAGGTATGAATGATGAT | + |
|
Preference number: 6 (lower is better) Translates to: DSDGHLEGLVLG*LLGLYQGMNDD Trigger: ATCATCATTCATACCTTGGTACAGGCCAAGAAGTCATCCAAGCACAAGGCCCTCAAGGTGACCATCACTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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| CDS CCA 72 bp | CAAGGTGCCCACAATGAACACAAGCCAGTACAGAGGTaGAAGAAAATGGCTTGCAAACTGCCTGACATTATT | + |
|
Preference number: 6 (lower is better) Translates to: QGAHNEHKPVQR*KKMACKLPDII Trigger: AATAATGTCAGGCAGTTTGCAAGCCATTTTCTTCCACCTCTGTACTGGCTTGTGTTCATTGTGGGCACCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000111454.4 ENSMUST00000163559.8 ENSMUST00000166236.9 ENSMUST00000168910.2 ENSMUST00000180093.2 |
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