Pregenerated sensors for CCR7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037944Ensembl transcript IDs: ENSMUST00000103134.4
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATCCAGAGCCCCAGCTGGGACTGCCTTCAGGCTGATGGTGTGGCCTaGACCTCAGGAAAGGCGGTGGAGAGGCAGAAGGGAGGGGCAGGG | + |
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Preference number: 1 (lower is better) Translates to: IQSPSWDCLQADGVA*TSGKAVERQKGGAG Trigger: CCCTGCCCCTCCCTTCTGCCTCTCCACCGCCTTTCCTGAGGTCCAGGCCACACCATCAGCCTGAAGGCAGTCCCAGCTGGGGCTCTGGAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| 3UTR CCA 90 bp | TTGCCATCCAGAGCCCCAGCTGGGACTGCCTTCAGGCTGATGGTGTaGCCTGGACCTCAGGAAAGGCGGTGGAGAGGCAGAAGGGAGGGG | + |
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Preference number: 1 (lower is better) Translates to: LPSRAPAGTAFRLMV*PGPQERRWRGRREG Trigger: CCCCTCCCTTCTGCCTCTCCACCGCCTTTCCTGAGGTCCAGGCCACACCATCAGCCTGAAGGCAGTCCCAGCTGGGGCTCTGGATGGCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| 3UTR CCA 90 bp | ACTGCCTTCAGGCTGATGGTGTGGCCTGGACCTCAGGAAAGGCGGTaGAGAGGCAGAAGGGAGGGGCAGGGGTGCTCTGTGGGAGCATTT | + |
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Preference number: 1 (lower is better) Translates to: TAFRLMVWPGPQERR*RGRREGQGCSVGAF Trigger: AAATGCTCCCACAGAGCACCCCTGCCCCTCCCTTCTGCCTCTCCACCGCCTTTCCTGAGGTCCAGGCCACACCATCAGCCTGAAGGCAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| 3UTR TCA 90 bp | ACTTGTCATTGCCATCCAGAGCCCCAGCTGGGACTGCCTTCAGGCTaGTGGTGTGGCCTGGACCTCAGGAAAGGCGGTGGAGAGGCAGAA | + |
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Preference number: 1 (lower is better) Translates to: TCHCHPEPQLGLPSG*WCGLDLRKGGGEAE Trigger: TTCTGCCTCTCCACCGCCTTTCCTGAGGTCCAGGCCACACCATCAGCCTGAAGGCAGTCCCAGCTGGGGCTCTGGATGGCAATGACAAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| 3UTR GCA 90 bp | GAGACCCAACTACTTGTCATTGCCATCCAGAGCCCCAGCTGGGACTaGCTTCAGGCTGATGGTGTGGCCTGGACCTCAGGAAAGGCGGTG | + |
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Preference number: 1 (lower is better) Translates to: ETQLLVIAIQSPSWD*LQADGVAWTSGKAV Trigger: CACCGCCTTTCCTGAGGTCCAGGCCACACCATCAGCCTGAAGGCAGTCCCAGCTGGGGCTCTGGATGGCAATGACAAGTAGTTGGGTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| 3UTR CCA 90 bp | GGTTCATTCAGAGGCCTCCGAAGACTACTCAACCAGGGTGTTCACTaGCCCCACATCCCTCACTCCGGAAAGTGTGGCAGCCTCTCACTT | + |
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Preference number: 1 (lower is better) Translates to: GSFRGLRRLLNQGVH*PHIPHSGKCGSLSL Trigger: AAGTGAGAGGCTGCCACACTTTCCGGAGTGAGGGATGTGGGGCCAGTGAACACCCTGGTTGAGTAGTCTTCGGAGGCCTCTGAATGAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| 3UTR CCA 90 bp | ATCATAGAGACCCAACTACTTGTCATTGCCATCCAGAGCCCCAGCTaGGACTGCCTTCAGGCTGATGGTGTGGCCTGGACCTCAGGAAAG | + |
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Preference number: 1 (lower is better) Translates to: IIETQLLVIAIQSPS*DCLQADGVAWTSGK Trigger: CTTTCCTGAGGTCCAGGCCACACCATCAGCCTGAAGGCAGTCCCAGCTGGGGCTCTGGATGGCAATGACAAGTAGTTGGGTCTCTATGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| 3UTR CCA 90 bp | GAGGAAAGGTATCAGTGGCTGACAGAGAACAAAGAAGTAGCTTGCTaGCCTCTGTCAGCCAGCAGGGTCACCTTCTCTCCTTTCTGTCAC | + |
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Preference number: 1 (lower is better) Translates to: EERYQWLTENKEVAC*PLSASRVTFSPFCH Trigger: GTGACAGAAAGGAGAGAAGGTGACCCTGCTGGCTGACAGAGGCCAGCAAGCTACTTCTTTGTTCTCTGTCAGCCACTGATACCTTTCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| 3UTR GCA 90 bp | CATGAGGAAAGGTATCAGTGGCTGACAGAGAACAAAGAAGTAGCTTaGTGGCCTCTGTCAGCCAGCAGGGTCACCTTCTCTCCTTTCTGT | + |
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Preference number: 1 (lower is better) Translates to: HEERYQWLTENKEVA*WPLSASRVTFSPFC Trigger: ACAGAAAGGAGAGAAGGTGACCCTGCTGGCTGACAGAGGCCAGCAAGCTACTTCTTTGTTCTCTGTCAGCCACTGATACCTTTCCTCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| 3UTR GCA 90 bp | AGGGGTGCTCTGTGGGAGCATTTAGAGAGACTGTCATCTCTTGCTTaGTTGCTAAGTGTGGAGATAAGCTCTGTCCTTGAATCTCCGGGA | + |
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Preference number: 1 (lower is better) Translates to: RGALWEHLERLSSLA*LLSVEISSVLESPG Trigger: TCCCGGAGATTCAAGGACAGAGCTTATCTCCACACTTAGCAAGCAAGCAAGAGATGACAGTCTCTCTAAATGCTCCCACAGAGCACCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| 3UTR GCA 90 bp | TTAAGCAGTTTCTTAGGTCCTCATGTCAACCTGACTGGCCAGAATTaGTCTTCCCTCAGCAGCAATTCGGTGGATGGAGAGTCTGTGCAT | + |
|
Preference number: 1 (lower is better) Translates to: LSSFLGPHVNLTGQN*SSLSSNSVDGESVH Trigger: ATGCACAGACTCTCCATCCACCGAATTGCTGCTGAGGGAAGAGCAATTCTGGCCAGTCAGGTTGACATGAGGACCTAAGAAACTGCTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| 3UTR-3UTR GCA 90 bp | ACTGCCTTCAGGCTGATGGTGTGGCCTGGACCTCAGGAAAGGCGGTGGAGAGGCCTGTCATCTCTTGCTTaGTTGCTAAGTGTGGAGATA | + |
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Preference number: 2 (lower is better) Translates to: TAFRLMVWPGPQERRWRGLSSLA*LLSVEI Trigger: TATCTCCACACTTAGCAAGCAAGCAAGAGATGACAG...GCCTCTCCACCGCCTTTCCTGAGGTCCAGGCCACACCATCAGCCTGAAGGCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| 3UTR-3UTR GCA 90 bp | TGGCCCCACATCCCTCACTCCGGAAAGTGTGGCAGCCTCTCACTTTCACTTTTGGAGTCTGTGCATGTGTaGACCACATTAAGGCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: WPHIPHSGKCGSLSLSLLESVHV*TTLRLL Trigger: CAGGAGCCTTAATGTGGTGCACACATGCACAGACTC...CAAAAGTGAAAGTGAGAGGCTGCCACACTTTCCGGAGTGAGGGATGTGGGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| 3UTR CAA 90 bp | GGTGCTCTGTGGGAGCATTTAGAGAGACTGTCATCTCTTGCTTGCTaGCTAAGTGTGGAGATAAGCTCTGTCCTTGAATCTCCGGGACAT | + |
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Preference number: 2 (lower is better) Translates to: GALWEHLERLSSLAC*LSVEISSVLESPGH Trigger: ATGTCCCGGAGATTCAAGGACAGAGCTTATCTCCACACTTAGCAAGCAAGCAAGAGATGACAGTCTCTCTAAATGCTCCCACAGAGCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| 3UTR-3UTR CCA 90 bp | GGAGCATTTAGAGAGACTGTCATCTCTTGCTTGCTTGCTAAGTGTGGAGATAAGCAGCAATTCGGTGGATaGAGAGTCTGTGCATGTGTG | + |
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Preference number: 2 (lower is better) Translates to: GAFRETVISCLLAKCGDKQQFGG*RVCACV Trigger: CACACATGCACAGACTCTCCATCCACCGAATTGCTG...CTTATCTCCACACTTAGCAAGCAAGCAAGAGATGACAGTCTCTCTAAATGCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| 3UTR TCA 72 bp | TGCCATCCAGAGCCCCAGCTGGGACTGCCTTCAGGCTaGTGGTGTGGCCTGGACCTCAGGAAAGGCGGTGGA | + |
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Preference number: 3 (lower is better) Translates to: CHPEPQLGLPSG*WCGLDLRKGGG Trigger: TCCACCGCCTTTCCTGAGGTCCAGGCCACACCATCAGCCTGAAGGCAGTCCCAGCTGGGGCTCTGGATGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| 3UTR CCA 72 bp | CCCAGCTGGGACTGCCTTCAGGCTGATGGTGTGGCCTaGACCTCAGGAAAGGCGGTGGAGAGGCAGAAGGGA | + |
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Preference number: 3 (lower is better) Translates to: PSWDCLQADGVA*TSGKAVERQKG Trigger: TCCCTTCTGCCTCTCCACCGCCTTTCCTGAGGTCCAGGCCACACCATCAGCCTGAAGGCAGTCCCAGCTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| 3UTR-3UTR CAA 90 bp | CCAGCTGGGACTGCCTTCAGGCTGATGGTGTGGCCTGGACCTCAGGAAAGGCGGCCTGACTGGCCAGAATaGCTCTTCCCTCAGCAGCAA | + |
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Preference number: 3 (lower is better) Translates to: PAGTAFRLMVWPGPQERRPDWPE*LFPQQQ Trigger: TTGCTGCTGAGGGAAGAGCAATTCTGGCCAGTCAGG...CCGCCTTTCCTGAGGTCCAGGCCACACCATCAGCCTGAAGGCAGTCCCAGCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| 3UTR GCA 72 bp | CTACTTGTCATTGCCATCCAGAGCCCCAGCTGGGACTaGCTTCAGGCTGATGGTGTGGCCTGGACCTCAGGA | + |
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Preference number: 3 (lower is better) Translates to: LLVIAIQSPSWD*LQADGVAWTSG Trigger: TCCTGAGGTCCAGGCCACACCATCAGCCTGAAGGCAGTCCCAGCTGGGGCTCTGGATGGCAATGACAAGTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| 3UTR CCA 72 bp | AGAGGCCTCCGAAGACTACTCAACCAGGGTGTTCACTaGCCCCACATCCCTCACTCCGGAAAGTGTGGCAGC | + |
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Preference number: 3 (lower is better) Translates to: RGLRRLLNQGVH*PHIPHSGKCGS Trigger: GCTGCCACACTTTCCGGAGTGAGGGATGTGGGGCCAGTGAACACCCTGGTTGAGTAGTCTTCGGAGGCCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| 3UTR CCA 72 bp | ACCCAACTACTTGTCATTGCCATCCAGAGCCCCAGCTaGGACTGCCTTCAGGCTGATGGTGTGGCCTGGACC | + |
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Preference number: 3 (lower is better) Translates to: TQLLVIAIQSPS*DCLQADGVAWT Trigger: GGTCCAGGCCACACCATCAGCCTGAAGGCAGTCCCAGCTGGGGCTCTGGATGGCAATGACAAGTAGTTGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| 3UTR CCA 72 bp | GGTGGAGAGGCAGAAGGGAGGGGCAGGGGTGCTCTGTaGGAGCATTTAGAGAGACTGTCATCTCTTGCTTGC | + |
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Preference number: 3 (lower is better) Translates to: GGEAEGRGRGAL*EHLERLSSLAC Trigger: GCAAGCAAGAGATGACAGTCTCTCTAAATGCTCCCACAGAGCACCCCTGCCCCTCCCTTCTGCCTCTCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| 3UTR-3UTR CAA 90 bp | TCCAGAGCCCCAGCTGGGACTGCCTTCAGGCTGATGGTGTGGCCTGGACCTCAGCTCTCACTTTCACTTTaGGCTGTCGTTTTGGGGATA | + |
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Preference number: 3 (lower is better) Translates to: SRAPAGTAFRLMVWPGPQLSLSL*AVVLGI Trigger: TATCCCCAAAACGACAGCCAAAAGTGAAAGTGAGAG...CTGAGGTCCAGGCCACACCATCAGCCTGAAGGCAGTCCCAGCTGGGGCTCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| 3UTR CCA 72 bp | TATCAGTGGCTGACAGAGAACAAAGAAGTAGCTTGCTaGCCTCTGTCAGCCAGCAGGGTCACCTTCTCTCCT | + |
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Preference number: 3 (lower is better) Translates to: YQWLTENKEVAC*PLSASRVTFSP Trigger: AGGAGAGAAGGTGACCCTGCTGGCTGACAGAGGCCAGCAAGCTACTTCTTTGTTCTCTGTCAGCCACTGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| 3UTR GCA 72 bp | TTCTTAGGTCCTCATGTCAACCTGACTGGCCAGAATTaGTCTTCCCTCAGCAGCAATTCGGTGGATGGAGAG | + |
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Preference number: 3 (lower is better) Translates to: FLGPHVNLTGQN*SSLSSNSVDGE Trigger: CTCTCCATCCACCGAATTGCTGCTGAGGGAAGAGCAATTCTGGCCAGTCAGGTTGACATGAGGACCTAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| 3UTR GCA 72 bp | TTTTATTCCCATCATAGAGACCCAACTACTTGTCATTaGCATCCAGAGCCCCAGCTGGGACTGCCTTCAGGC | + |
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Preference number: 3 (lower is better) Translates to: FYSHHRDPTTCH*HPEPQLGLPSG Trigger: GCCTGAAGGCAGTCCCAGCTGGGGCTCTGGATGGCAATGACAAGTAGTTGGGTCTCTATGATGGGAATAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| 3UTR GCA 72 bp | TGCTCTGTGGGAGCATTTAGAGAGACTGTCATCTCTTaGTTGCTTGCTAAGTGTGGAGATAAGCTCTGTCCT | + |
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Preference number: 3 (lower is better) Translates to: CSVGAFRETVIS*LLAKCGDKLCP Trigger: AGGACAGAGCTTATCTCCACACTTAGCAAGCAAGCAAGAGATGACAGTCTCTCTAAATGCTCCCACAGAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| 3UTR GCA 72 bp | CTGTGGGAGCATTTAGAGAGACTGTCATCTCTTGCTTaGTTGCTAAGTGTGGAGATAAGCTCTGTCCTTGAA | + |
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Preference number: 3 (lower is better) Translates to: LWEHLERLSSLA*LLSVEISSVLE Trigger: TTCAAGGACAGAGCTTATCTCCACACTTAGCAAGCAAGCAAGAGATGACAGTCTCTCTAAATGCTCCCACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS-3UTR GCA 90 bp | TCCAGAGCCCCAGCTGGGACTGCCTTCAGGCTGATGGTGTGGCCTGGACCTCAGCGGCAGGAAGACCAGTaGCGGAGCCGTTCCTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: SRAPAGTAFRLMVWPGPQRQEDQ*RSRSWL Trigger: CAGCCAGGAACGGCTCCGGCACTGGTCTTCCTGCCG...CTGAGGTCCAGGCCACACCATCAGCCTGAAGGCAGTCCCAGCTGGGGCTCTGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS-3UTR CCA 90 bp | CCCAGCTGGGACTGCCTTCAGGCTGATGGTGTGGCCTGGACCTCAGGAAAGGCGACCATCTGGGCCACTTaGATGGTGATCAAGGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: PSWDCLQADGVAWTSGKATIWAT*MVIKAS Trigger: GGAGGCCTTGATCACCATCCAAGTGGCCCAGATGGT...CGCCTTTCCTGAGGTCCAGGCCACACCATCAGCCTGAAGGCAGTCCCAGCTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS-3UTR TCA 90 bp | ATTGCCATCCAGAGCCCCAGCTGGGACTGCCTTCAGGCTGATGGTGTGGCCTGGTCCGCACATCCTTCTTaGAGCACACCGACTCGTACA | + |
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Preference number: 4 (lower is better) Translates to: IAIQSPSWDCLQADGVAWSAHPS*STPTRT Trigger: TGTACGAGTCGGTGTGCTTCAAGAAGGATGTGCGGA...CCAGGCCACACCATCAGCCTGAAGGCAGTCCCAGCTGGGGCTCTGGATGGCAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS-3UTR CCA 90 bp | CCCAGCTGGGACTGCCTTCAGGCTGATGGTGTGGCCTGGACCTCAGGAAAGGCGTGGCAGAAGCACACCTaGAAAATGACAAGGAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: PSWDCLQADGVAWTSGKAWQKHT*KMTRRA Trigger: GGCTCTCCTTGTCATTTTCCAGGTGTGCTTCTGCCA...CGCCTTTCCTGAGGTCCAGGCCACACCATCAGCCTGAAGGCAGTCCCAGCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS-3UTR GCA 90 bp | GGTGTTCACTGGCCCCACATCCCTCACTCCGGAAAGTGTGGCAGCCTCTCACTTCCGCTCAAAGTTGCGTaGCTGGAGCAAGGTACGGAT | + |
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Preference number: 4 (lower is better) Translates to: GVHWPHIPHSGKCGSLSLPLKVA*LEQGTD Trigger: ATCCGTACCTTGCTCCAGGCACGCAACTTTGAGCGG...AAGTGAGAGGCTGCCACACTTTCCGGAGTGAGGGATGTGGGGCCAGTGAACACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS-3UTR TCA 90 bp | GGTGTTCACTGGCCCCACATCCCTCACTCCGGAAAGTGTGGCAGCCTCTCACTTAGCACACCTGGAAAATaGCAAGGAGAGCCACCACCA | + |
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Preference number: 4 (lower is better) Translates to: GVHWPHIPHSGKCGSLSLSTPGK*QGEPPP Trigger: TGGTGGTGGCTCTCCTTGTCATTTTCCAGGTGTGCT...AAGTGAGAGGCTGCCACACTTTCCGGAGTGAGGGATGTGGGGCCAGTGAACACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS-3UTR CCA 90 bp | TGGCCCCACATCCCTCACTCCGGAAAGTGTGGCAGCCTCTCACTTTCACTTTTGACACGGCCTGGACGATaGCTACGTAGCGGTCAATGC | + |
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Preference number: 4 (lower is better) Translates to: WPHIPHSGKCGSLSLSLLTRPGR*LRSGQC Trigger: GCATTGACCGCTACGTAGCCATCGTCCAGGCCGTGT...CAAAAGTGAAAGTGAGAGGCTGCCACACTTTCCGGAGTGAGGGATGTGGGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS-3UTR TCA 90 bp | CCGGGACATCTCTCTAAGCTAGAAGCAGGTTCATTCAGAGGCCTCCGAAGACTACTGCCACGGCCAGGTTaGGCAGGTAGGTATCCGTCA | + |
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Preference number: 4 (lower is better) Translates to: PGHLSKLEAGSFRGLRRLLPRPG*AGRYPS Trigger: TGACGGATACCTACCTGCTCAACCTGGCCGTGGCAG...TAGTCTTCGGAGGCCTCTGAATGAACCTGCTTCTAGCTTAGAGAGATGTCCCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS-3UTR TCA 90 bp | AGAAGCAGGTTCATTCAGAGGCCTCCGAAGACTACTCAACCAGGGTGTTCACTGCCTCCACTTGGGCACTaGCCAGTGAGCATCTCAGCG | + |
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Preference number: 4 (lower is better) Translates to: RSRFIQRPPKTTQPGCSLPPLGH*PVSISA Trigger: CGCTGAGATGCTCACTGGTCAGTGCCCAAGTGGAGG...CAGTGAACACCCTGGTTGAGTAGTCTTCGGAGGCCTCTGAATGAACCTGCTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS-3UTR TCA 90 bp | AGGTCCTCATGTCAACCTGACTGGCCAGAATTGCTCTTCCCTCAGCAGCAATTCAAGTTGGCCACCGTCTaGGCCAGGACCACCCCATTG | + |
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Preference number: 4 (lower is better) Translates to: RSSCQPDWPELLFPQQQFKLATV*ARTTPL Trigger: CAATGGGGTGGTCCTGGCTCAGACGGTGGCCAACTT...GAATTGCTGCTGAGGGAAGAGCAATTCTGGCCAGTCAGGTTGACATGAGGACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS-3UTR GCA 90 bp | CTCAGCAGCAATTCGGTGGATGGAGAGTCTGTGCATGTGTGCACCACATTAAGGGGGCCAGCATCCAGATaGCCACACAGGACAGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: LSSNSVDGESVHVCTTLRGPASR*PHRTAC Trigger: GCAAGCTGTCCTGTGTGGGCATCTGGATGCTGGCCC...CCTTAATGTGGTGCACACATGCACAGACTCTCCATCCACCGAATTGCTGCTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS-3UTR GCA 90 bp | GCCCCACATCCCTCACTCCGGAAAGTGTGGCAGCCTCTCACTTTCACTTTTGGCTGTTCCGCTCAAAGTTaGGTGCCTGGAGCAAGGTAC | + |
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Preference number: 4 (lower is better) Translates to: APHPSLRKVWQPLTFTFGCSAQS*VPGARY Trigger: GTACCTTGCTCCAGGCACGCAACTTTGAGCGGAACA...GCCAAAAGTGAAAGTGAGAGGCTGCCACACTTTCCGGAGTGAGGGATGTGGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS-3UTR CCA 90 bp | AATTGCTCTTCCCTCAGCAGCAATTCGGTGGATGGAGAGTCTGTGCATGTGTGCACGGGGAGAAGGTTGTaGTGGTCTCCGCCTCCATGC | + |
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Preference number: 4 (lower is better) Translates to: NCSSLSSNSVDGESVHVCTGRRL*WSPPPC Trigger: GCATGGAGGCGGAGACCACCACAACCTTCTCCCCGT...GCACACATGCACAGACTCTCCATCCACCGAATTGCTGCTGAGGGAAGAGCAATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS-3UTR TCA 90 bp | AATTGCTCTTCCCTCAGCAGCAATTCGGTGGATGGAGAGTCTGTGCATGTGTGCCGTAGCGGTCAATGCTaGTGCATAGGAGCAGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: NCSSLSSNSVDGESVHVCRSGQC*CIGAAA Trigger: TGCTGCTGCTCCTATGCATCAGCATTGACCGCTACG...GCACACATGCACAGACTCTCCATCCACCGAATTGCTGCTGAGGGAAGAGCAATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS-3UTR GCA 90 bp | AATTGCTCTTCCCTCAGCAGCAATTCGGTGGATGGAGAGTCTGTGCATGTGTGCGAGGAAAAGGATGTCTaGCACGGCCAGGTTGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: NCSSLSSNSVDGESVHVCEEKDV*HGQVEQ Trigger: CTGCTCAACCTGGCCGTGGCAGACATCCTTTTCCTC...GCACACATGCACAGACTCTCCATCCACCGAATTGCTGCTGAGGGAAGAGCAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| 3UTR CAA 72 bp | AAGGTATCAGTGGCTGACAGAGAACAAAGAAGTAGCTaGCTGGCCTCTGTCAGCCAGCAGGGTCACCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: KVSVADREQRSS*LASVSQQGHLL Trigger: GAGAAGGTGACCCTGCTGGCTGACAGAGGCCAGCAAGCTACTTCTTTGTTCTCTGTCAGCCACTGATACCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS-3UTR TCA 90 bp | AGGTCCTCATGTCAACCTGACTGGCCAGAATTGCTCTTCCCTCAGCAGCAATTCCGATGTAGTCATCGGTaGCCTCATCTTGGCAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: RSSCQPDWPELLFPQQQFRCSHR*PHLGRS Trigger: GCTTCTGCCAAGATGAGGTCACCGATGACTACATCG...GAATTGCTGCTGAGGGAAGAGCAATTCTGGCCAGTCAGGTTGACATGAGGACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS-3UTR CCA 90 bp | AGAAGCAGGTTCATTCAGAGGCCTCCGAAGACTACTCAACCAGGGTGTTCACTGGGGTGTAGTCCACCGTaGTATTCTCGCCGATGTAGT | + |
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Preference number: 4 (lower is better) Translates to: RSRFIQRPPKTTQPGCSLGCSPP*YSRRCS Trigger: ACTACATCGGCGAGAATACCACGGTGGACTACACCC...CAGTGAACACCCTGGTTGAGTAGTCTTCGGAGGCCTCTGAATGAACCTGCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS-3UTR CCA 90 bp | AGAAGCAGGTTCATTCAGAGGCCTCCGAAGACTACTCAACCAGGGTGTTCACTGCAAAGATCCAGGACTTaGCTTCGCTGTAGGCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: RSRFIQRPPKTTQPGCSLQRSRT*LRCRPR Trigger: TCTGGGCCTACAGCGAAGCCAAGTCCTGGATCTTTG...CAGTGAACACCCTGGTTGAGTAGTCTTCGGAGGCCTCTGAATGAACCTGCTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS-3UTR CCA 90 bp | AGAAGCAGGTTCATTCAGAGGCCTCCGAAGACTACTCAACCAGGGTGTTCACTGATCAAGGCCTCCACTTaGGCACTGACCAGTGAGCAT | + |
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Preference number: 4 (lower is better) Translates to: RSRFIQRPPKTTQPGCSLIKAST*ALTSEH Trigger: ATGCTCACTGGTCAGTGCCCAAGTGGAGGCCTTGAT...CAGTGAACACCCTGGTTGAGTAGTCTTCGGAGGCCTCTGAATGAACCTGCTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS-3UTR CCA 90 bp | TGGCCCCACATCCCTCACTCCGGAAAGTGTGGCAGCCTCTCACTTTCACTTTTGAACCCAAAAACCATCTaGGCCACTTGGATGGTGATC | + |
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Preference number: 4 (lower is better) Translates to: WPHIPHSGKCGSLSLSLLNPKTI*ATWMVI Trigger: GATCACCATCCAAGTGGCCCAGATGGTTTTTGGGTT...CAAAAGTGAAAGTGAGAGGCTGCCACACTTTCCGGAGTGAGGGATGTGGGGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS-3UTR TCA 90 bp | GGAGCATTTAGAGAGACTGTCATCTCTTGCTTGCTTGCTAAGTGTGGAGATAAGGGGCCACTTGGATGGTaGTCAAGGCCTCCACTTGGG | + |
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Preference number: 4 (lower is better) Translates to: GAFRETVISCLLAKCGDKGPLGW*SRPPLG Trigger: CCCAAGTGGAGGCCTTGATCACCATCCAAGTGGCCC...CTTATCTCCACACTTAGCAAGCAAGCAAGAGATGACAGTCTCTCTAAATGCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS-3UTR CCA 90 bp | AGCAGTTTCTTAGGTCCTCATGTCAACCTGACTGGCCAGAATTGCTCTTCCCTCTCAAAGTTGCGTGCCTaGAGCAAGGTACGGATGATA | + |
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Preference number: 4 (lower is better) Translates to: SSFLGPHVNLTGQNCSSLSKLRA*SKVRMI Trigger: TATCATCCGTACCTTGCTCCAGGCACGCAACTTTGA...GAGGGAAGAGCAATTCTGGCCAGTCAGGTTGACATGAGGACCTAAGAAACTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS-3UTR TCA 90 bp | TGGGAGCATTTAGAGAGACTGTCATCTCTTGCTTGCTTGCTAAGTGTGGAGATAGCAGCTGGAAGACTATaGAGACTACCACCACGGCAA | + |
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Preference number: 4 (lower is better) Translates to: WEHLERLSSLACLLSVEIAAGRL*RLPPRQ Trigger: TTGCCGTGGTGGTAGTCTTCATAGTCTTCCAGCTGC...TATCTCCACACTTAGCAAGCAAGCAAGAGATGACAGTCTCTCTAAATGCTCCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS-3UTR TCA 90 bp | CTTGGCTTGAGTGTTAACTTCTCAGCCATATCTTTTACAGCTTTGGTTGAGGTACATACAAGAAAGGGTTaGCGCAGCAGCGGACGGAGG | + |
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Preference number: 4 (lower is better) Translates to: LGLSVNFSAISFTALVEVHTRKG*RSSGRR Trigger: CCTCCGTCCGCTGCTGCGTCAACCCTTTCTTGTATG...TACCTCAACCAAAGCTGTAAAAGATATGGCTGAGAAGTTAACACTCAAGCCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS-3UTR TCA 90 bp | TGTCGTTTTGGGGATAGCTGTCTTGGCTTGAGTGTTAACTTCTCAGCCATATCTGCAGCAGCATCCCGCTaGAGAAGCTTAACTTATAGA | + |
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Preference number: 4 (lower is better) Translates to: CRFGDSCLGLSVNFSAISAAASR*RSLTYR Trigger: TCTATAAGTTAAGCTTCTTCAGCGGGATGCTGCTGC...AGATATGGCTGAGAAGTTAACACTCAAGCCAAGACAGCTATCCCCAAAACGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| 3UTR CAA 72 bp | TGGGAGCATTTAGAGAGACTGTCATCTCTTGCTTGCTaGCTAAGTGTGGAGATAAGCTCTGTCCTTGAATCT | + |
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Preference number: 4 (lower is better) Translates to: WEHLERLSSLAC*LSVEISSVLES Trigger: AGATTCAAGGACAGAGCTTATCTCCACACTTAGCAAGCAAGCAAGAGATGACAGTCTCTCTAAATGCTCCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS GCA 90 bp | GTTGTGGTGGTCTCCGCCTCCATGCTCACCGACGCGTTCCGTACATaGCGGCAGGAAGACCAGTGCCGGAGCCGTTCCTGGCTGAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: VVVVSASMLTDAFRT*RQEDQCRSRSWLRQ Trigger: CTGCCTCAGCCAGGAACGGCTCCGGCACTGGTCTTCCTGCCGGCATGTACGGAACGCGTCGGTGAGCATGGAGGCGGAGACCACCACAAC 66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS GCA 90 bp | TCCATGCTCACCGACGCGTTCCGTACATGCCGGCAGGAAGACCAGTaGCGGAGCCGTTCCTGGCTGAGGCAGCCCAAGTCCTTGAAGAGC | + |
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Preference number: 5 (lower is better) Translates to: SMLTDAFRTCRQEDQ*RSRSWLRQPKSLKS Trigger: GCTCTTCAAGGACTTGGGCTGCCTCAGCCAGGAACGGCTCCGGCACTGGTCTTCCTGCCGGCATGTACGGAACGCGTCGGTGAGCATGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS TCA 90 bp | GGCCACTTGGATGGTGATCAAGGCCTCCACTTGGGCACTGACCAGTaGGCATCTCAGCGTGTCCTCGCCGCTGTTCTTCTGGAGGCCGCT | + |
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Preference number: 5 (lower is better) Translates to: GHLDGDQGLHLGTDQ*ASQRVLAAVLLEAA Trigger: AGCGGCCTCCAGAAGAACAGCGGCGAGGACACGCTGAGATGCTCACTGGTCAGTGCCCAAGTGGAGGCCTTGATCACCATCCAAGTGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS-3UTR CAA 90 bp | CCAGCTGGGACTGCCTTCAGGCTGATGGTGTGGCCTGGACCTCAGGAAAGGCGGAACCATCTGGGCCACTaGGATGGTGATCAAGGCCTC | + |
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Preference number: 5 (lower is better) Translates to: PAGTAFRLMVWPGPQERRNHLGH*DGDQGL Trigger: GAGGCCTTGATCACCATCCAAGTGGCCCAGATGGTT...CCGCCTTTCCTGAGGTCCAGGCCACACCATCAGCCTGAAGGCAGTCCCAGCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS-3UTR CAA 90 bp | GTGTTCACTGGCCCCACATCCCTCACTCCGGAAAGTGTGGCAGCCTCTCACTTTAGTATCACCAGCCCGTaGCCGAGCAGGCCCACGAAG | + |
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Preference number: 5 (lower is better) Translates to: VFTGPTSLTPESVAASHFSITSP*PSRPTK Trigger: CTTCGTGGGCCTGCTCGGCAACGGGCTGGTGATACT...AAAGTGAGAGGCTGCCACACTTTCCGGAGTGAGGGATGTGGGGCCAGTGAACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS-3UTR CAA 90 bp | GCCCCACATCCCTCACTCCGGAAAGTGTGGCAGCCTCTCACTTTCACTTTTGGCCCCACACAGGACAGCTaGCTGATGAGAAGCACGCGG | + |
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Preference number: 5 (lower is better) Translates to: APHPSLRKVWQPLTFTFGPTQDS*LMRSTR Trigger: CCGCGTGCTTCTCATCAGCAAGCTGTCCTGTGTGGG...GCCAAAAGTGAAAGTGAGAGGCTGCCACACTTTCCGGAGTGAGGGATGTGGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS-3UTR CAA 90 bp | ATTGCCATCCAGAGCCCCAGCTGGGACTGCCTTCAGGCTGATGGTGTGGCCTGGACGGCAATGATCACCTaGATGGCCTTGTTCCGCTCA | + |
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Preference number: 5 (lower is better) Translates to: IAIQSPSWDCLQADGVAWTAMIT*MALFRS Trigger: TGAGCGGAACAAGGCCATCAAGGTGATCATTGCCGT...CCAGGCCACACCATCAGCCTGAAGGCAGTCCCAGCTGGGGCTCTGGATGGCAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS-3UTR CAA 90 bp | ACTGCCTTCAGGCTGATGGTGTGGCCTGGACCTCAGGAAAGGCGGTGGAGAGGCAAGTCCTTGAAGAGCTaGAAGAGGTCGCTGCGGAAC | + |
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Preference number: 5 (lower is better) Translates to: TAFRLMVWPGPQERRWRGKSLKS*KRSLRN Trigger: GTTCCGCAGCGACCTCTTCAAGCTCTTCAAGGACTT...GCCTCTCCACCGCCTTTCCTGAGGTCCAGGCCACACCATCAGCCTGAAGGCAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS CCA 90 bp | CCAAAAACCATCTGGGCCACTTGGATGGTGATCAAGGCCTCCACTTaGGCACTGACCAGTGAGCATCTCAGCGTGTCCTCGCCGCTGTTC | + |
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Preference number: 5 (lower is better) Translates to: PKTIWATWMVIKAST*ALTSEHLSVSSPLF Trigger: GAACAGCGGCGAGGACACGCTGAGATGCTCACTGGTCAGTGCCCAAGTGGAGGCCTTGATCACCATCCAAGTGGCCCAGATGGTTTTTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS-3UTR CAA 90 bp | GCCCCACATCCCTCACTCCGGAAAGTGTGGCAGCCTCTCACTTTCACTTTTGGCGCAATGTTGAGCTGCTaGCTGGTTTCGCAGCTGCTA | + |
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Preference number: 5 (lower is better) Translates to: APHPSLRKVWQPLTFTFGAMLSC*LVSQLL Trigger: TAGCAGCTGCGAAACCAGCAAGCAGCTCAACATTGC...GCCAAAAGTGAAAGTGAGAGGCTGCCACACTTTCCGGAGTGAGGGATGTGGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS CCA 90 bp | ATAGCCAGCATAGGCACTAGGAACCCAAAAACCATCTGGGCCACTTaGATGGTGATCAAGGCCTCCACTTGGGCACTGACCAGTGAGCAT | + |
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Preference number: 5 (lower is better) Translates to: IASIGTRNPKTIWAT*MVIKASTWALTSEH Trigger: ATGCTCACTGGTCAGTGCCCAAGTGGAGGCCTTGATCACCATCCAAGTGGCCCAGATGGTTTTTGGGTTCCTAGTGCCTATGCTGGCTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS-3UTR CAA 90 bp | CCGGGACATCTCTCTAAGCTAGAAGCAGGTTCATTCAGAGGCCTCCGAAGACTAAGGCAGCCCAAGTCCTaGAAGAGCTTGAAGAGGTCG | + |
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Preference number: 5 (lower is better) Translates to: PGHLSKLEAGSFRGLRRLRQPKS*KSLKRS Trigger: CGACCTCTTCAAGCTCTTCAAGGACTTGGGCTGCCT...TAGTCTTCGGAGGCCTCTGAATGAACCTGCTTCTAGCTTAGAGAGATGTCCCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS-3UTR CAA 90 bp | AGAAGCAGGTTCATTCAGAGGCCTCCGAAGACTACTCAACCAGGGTGTTCACTGTTGTTCCGCTCAAAGTaGCGTGCCTGGAGCAAGGTA | + |
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Preference number: 5 (lower is better) Translates to: RSRFIQRPPKTTQPGCSLLFRSK*RAWSKV Trigger: TACCTTGCTCCAGGCACGCAACTTTGAGCGGAACAA...CAGTGAACACCCTGGTTGAGTAGTCTTCGGAGGCCTCTGAATGAACCTGCTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS-3UTR CAA 90 bp | TGGAGAGTCTGTGCATGTGTGCACCACATTAAGGCTCCTGGGAGAGGTCCTTGTATCACCTTGATGGCCTaGTTCCGCTCAAAGTTGCGT | + |
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Preference number: 5 (lower is better) Translates to: WRVCACVHHIKAPGRGPCITLMA*FRSKLR Trigger: ACGCAACTTTGAGCGGAACAAGGCCATCAAGGTGAT...ACAAGGACCTCTCCCAGGAGCCTTAATGTGGTGCACACATGCACAGACTCTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS-3UTR CAA 90 bp | TGGAGAGTCTGTGCATGTGTGCACCACATTAAGGCTCCTGGGAGAGGTCCTTGTGTTTCGCAGCTGCTATaGGTGATGTTGAAGTTGGCC | + |
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Preference number: 5 (lower is better) Translates to: WRVCACVHHIKAPGRGPCVSQLL*VMLKLA Trigger: GGCCAACTTCAACATCACCAATAGCAGCTGCGAAAC...ACAAGGACCTCTCCCAGGAGCCTTAATGTGGTGCACACATGCACAGACTCTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS CCA 90 bp | TGCCAAAGATGCCCTTACACAGGTAGACGCCAAAGATCCAGGACTTaGCTTCGCTGTAGGCCCAGAAGGGAAGAATTAGGAGGAAAAGGA | + |
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Preference number: 5 (lower is better) Translates to: CQRCPYTGRRQRSRT*LRCRPRREELGGKG Trigger: TCCTTTTCCTCCTAATTCTTCCCTTCTGGGCCTACAGCGAAGCCAAGTCCTGGATCTTTGGCGTCTACCTGTGTAAGGGCATCTTTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS-3UTR CAA 90 bp | TGTCGTTTTGGGGATAGCTGTCTTGGCTTGAGTGTTAACTTCTCAGCCATATCTGCATACAAGAAAGGGTaGACGCAGCAGCGGACGGAG | + |
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Preference number: 5 (lower is better) Translates to: CRFGDSCLGLSVNFSAISAYKKG*TQQRTE Trigger: CTCCGTCCGCTGCTGCGTCAACCCTTTCTTGTATGC...AGATATGGCTGAGAAGTTAACACTCAAGCCAAGACAGCTATCCCCAAAACGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS-3UTR CAA 90 bp | TGGGAGCATTTAGAGAGACTGTCATCTCTTGCTTGCTTGCTAAGTGTGGAGATAAGGTCGCTGCGGAACTaGACGCCGATGAAGGCATAC | + |
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Preference number: 5 (lower is better) Translates to: WEHLERLSSLACLLSVEIRSLRN*TPMKAY Trigger: GTATGCCTTCATCGGCGTCAAGTTCCGCAGCGACCT...TATCTCCACACTTAGCAAGCAAGCAAGAGATGACAGTCTCTCTAAATGCTCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS-3UTR CAA 90 bp | CTTGGCTTGAGTGTTAACTTCTCAGCCATATCTTTTACAGCTTTGGTTGAGGTAATCGGTGACCTCATCTaGGCAGAAGCACACCTGGAA | + |
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Preference number: 5 (lower is better) Translates to: LGLSVNFSAISFTALVEVIGDLI*AEAHLE Trigger: TTCCAGGTGTGCTTCTGCCAAGATGAGGTCACCGAT...TACCTCAACCAAAGCTGTAAAAGATATGGCTGAGAAGTTAACACTCAAGCCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS GCA 72 bp | GTCTCCGCCTCCATGCTCACCGACGCGTTCCGTACATaGCGGCAGGAAGACCAGTGCCGGAGCCGTTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: VSASMLTDAFRT*RQEDQCRSRSW Trigger: CCAGGAACGGCTCCGGCACTGGTCTTCCTGCCGGCATGTACGGAACGCGTCGGTGAGCATGGAGGCGGAGAC 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS CAA 72 bp | TGCCGGAGCCGTTCCTGGCTGAGGCAGCCCAAGTCCTaGAAGAGCTTGAAGAGGTCGCTGCGGAACTTGACG | + |
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Preference number: 6 (lower is better) Translates to: CRSRSWLRQPKS*KSLKRSLRNLT Trigger: CGTCAAGTTCCGCAGCGACCTCTTCAAGCTCTTCAAGGACTTGGGCTGCCTCAGCCAGGAACGGCTCCGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS CAA 90 bp | GAAGACCAGTGCCGGAGCCGTTCCTGGCTGAGGCAGCCCAAGTCCTaGAAGAGCTTGAAGAGGTCGCTGCGGAACTTGACGCCGATGAAG | + |
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Preference number: 6 (lower is better) Translates to: EDQCRSRSWLRQPKS*KSLKRSLRNLTPMK Trigger: CTTCATCGGCGTCAAGTTCCGCAGCGACCTCTTCAAGCTCTTCAAGGACTTGGGCTGCCTCAGCCAGGAACGGCTCCGGCACTGGTCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS CAA 90 bp | TGCCGGAGCCGTTCCTGGCTGAGGCAGCCCAAGTCCTTGAAGAGCTaGAAGAGGTCGCTGCGGAACTTGACGCCGATGAAGGCATACAAG | + |
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Preference number: 6 (lower is better) Translates to: CRSRSWLRQPKSLKS*KRSLRNLTPMKAYK Trigger: CTTGTATGCCTTCATCGGCGTCAAGTTCCGCAGCGACCTCTTCAAGCTCTTCAAGGACTTGGGCTGCCTCAGCCAGGAACGGCTCCGGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS TCA 72 bp | GATGGTGATCAAGGCCTCCACTTGGGCACTGACCAGTaGGCATCTCAGCGTGTCCTCGCCGCTGTTCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: DGDQGLHLGTDQ*ASQRVLAAVLL Trigger: CAGAAGAACAGCGGCGAGGACACGCTGAGATGCTCACTGGTCAGTGCCCAAGTGGAGGCCTTGATCACCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS CCA 72 bp | ATCTGGGCCACTTGGATGGTGATCAAGGCCTCCACTTaGGCACTGACCAGTGAGCATCTCAGCGTGTCCTCG | + |
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Preference number: 6 (lower is better) Translates to: IWATWMVIKAST*ALTSEHLSVSS Trigger: CGAGGACACGCTGAGATGCTCACTGGTCAGTGCCCAAGTGGAGGCCTTGATCACCATCCAAGTGGCCCAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS CCA 72 bp | ATAGGCACTAGGAACCCAAAAACCATCTGGGCCACTTaGATGGTGATCAAGGCCTCCACTTGGGCACTGACC | + |
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Preference number: 6 (lower is better) Translates to: IGTRNPKTIWAT*MVIKASTWALT Trigger: GGTCAGTGCCCAAGTGGAGGCCTTGATCACCATCCAAGTGGCCCAGATGGTTTTTGGGTTCCTAGTGCCTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS GCA 72 bp | GATCACCTTGATGGCCTTGTTCCGCTCAAAGTTGCGTaGCTGGAGCAAGGTACGGATGATAATGAGGTAGCA | + |
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Preference number: 6 (lower is better) Translates to: DHLDGLVPLKVA*LEQGTDDNEVA Trigger: TGCTACCTCATTATCATCCGTACCTTGCTCCAGGCACGCAACTTTGAGCGGAACAAGGCCATCAAGGTGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS CAA 72 bp | GCAATGATCACCTTGATGGCCTTGTTCCGCTCAAAGTaGCGTGCCTGGAGCAAGGTACGGATGATAATGAGG | + |
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Preference number: 6 (lower is better) Translates to: AMITLMALFRSK*RAWSKVRMIMR Trigger: CCTCATTATCATCCGTACCTTGCTCCAGGCACGCAACTTTGAGCGGAACAAGGCCATCAAGGTGATCATTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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| CDS CAA 72 bp | AAGTCCTTGAAGAGCTTGAAGAGGTCGCTGCGGAACTaGACGCCGATGAAGGCATACAAGAAAGGGTTGACG | + |
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Preference number: 6 (lower is better) Translates to: KSLKSLKRSLRN*TPMKAYKKGLT Trigger: CGTCAACCCTTTCTTGTATGCCTTCATCGGCGTCAAGTTCCGCAGCGACCTCTTCAAGCTCTTCAAGGACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103134.4 |
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