Pregenerated sensors for CCR4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047898Ensembl transcript IDs: ENSMUST00000054414.5, ENSMUST00000215425.2
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACTAGCTCTGTAGACCAGGCTGGCCTCGACTTACAGAAATCCACCTaGCTGGCCTGTCGAGCGCTGGGATTAAAGGTGTGCCCACCACAG | + |
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Preference number: 1 (lower is better) Translates to: TSSVDQAGLDLQKST*LACRALGLKVCPPQ Trigger: CTGTGGTGGGCACACCTTTAATCCCAGCGCTCGACAGGCCAGGCAGGTGGATTTCTGTAAGTCGAGGCCAGCCTGGTCTACAGAGCTAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054414.5 |
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| 3UTR TCA 90 bp | TTGGTTTTACTTGTTTTCTTCCTCAGAGCCCTGTTCAGGGCACCCTaGCTGAAACAAGGCGAGCAGGTGCTGGGTGTGTGGAGCTTGTTA | + |
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Preference number: 1 (lower is better) Translates to: LVLLVFFLRALFRAP*LKQGEQVLGVWSLL Trigger: TAACAAGCTCCACACACCCAGCACCTGCTCGCCTTGTTTCAGTCAGGGTGCCCTGAACAGGGCTCTGAGGAAGAAAACAAGTAAAACCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
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| 3UTR CCA 90 bp | TTCCTCCTTTCTTTTCAAGACAAAGTCTCACTAAATAGCCTTGGCTaGTCTGGAACTAGCTCTGTAGACCAGGCTGGCCTCGACTTACAG | + |
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Preference number: 1 (lower is better) Translates to: FLLSFQDKVSLNSLG*SGTSSVDQAGLDLQ Trigger: CTGTAAGTCGAGGCCAGCCTGGTCTACAGAGCTAGTTCCAGACCAGCCAAGGCTATTTAGTGAGACTTTGTCTTGAAAAGAAAGGAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054414.5 |
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| 3UTR CCA 90 bp | CACGGACATTTCAACCGATGTGTGTTCTACACACCTTGTGTTAAGTaGAGAAGGGATTGTCCCAACACCCTTATCTCTACGCTTGTAACC | + |
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Preference number: 1 (lower is better) Translates to: HGHFNRCVFYTPCVK*RRDCPNTLISTLVT Trigger: GGTTACAAGCGTAGAGATAAGGGTGTTGGGACAATCCCTTCTCCACTTAACACAAGGTGTGTAGAACACACATCGGTTGAAATGTCCGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054414.5 |
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| 3UTR GCA 90 bp | AAAGGTGTGCCCACCACAGGCTCATCCAGTTTACATTTGTTTGTTTaGTTGCTTGTTTGTTTGTTTGTTTCTGCAAGACAGGGTTTCTCT | + |
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Preference number: 1 (lower is better) Translates to: KGVPTTGSSSLHLFV*LLVCLFVSARQGFS Trigger: AGAGAAACCCTGTCTTGCAGAAACAAACAAACAAACAAGCAAGCAAACAAACAAATGTAAACTGGATGAGCCTGTGGTGGGCACACCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054414.5 |
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| 3UTR TCA 90 bp | GATTGTCCCAACACCCTTATCTCTACGCTTGTAACCAGGCTTCAATaGAGCATCCTCTATAATAAGAGAATCAAGATGTCAGATCCTCAT | + |
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Preference number: 1 (lower is better) Translates to: DCPNTLISTLVTRLQ*SILYNKRIKMSDPH Trigger: ATGAGGATCTGACATCTTGATTCTCTTATTATAGAGGATGCTTCATTGAAGCCTGGTTACAAGCGTAGAGATAAGGGTGTTGGGACAATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054414.5 |
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| 3UTR GCA 90 bp | CTGAACAAACACCTATCACAATTAAAACATACCAGAAAGCCAAACTaGACGGACATTTCAACCGATGTGTGTTCTACACACCTTGTGTTA | + |
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Preference number: 1 (lower is better) Translates to: LNKHLSQLKHTRKPN*TDISTDVCSTHLVL Trigger: TAACACAAGGTGTGTAGAACACACATCGGTTGAAATGTCCGTGCAGTTTGGCTTTCTGGTATGTTTTAATTGTGATAGGTGTTTGTTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054414.5 |
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| 3UTR CAA 90 bp | CTCTTGGGAGCCACCTGCAGGGTGAGAAGCCATCTTGCCATGGTCTaGGTTTTACTTGTTTTCTTCCTCAGAGCCCTGTTCAGGGCACCC | + |
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Preference number: 2 (lower is better) Translates to: LLGATCRVRSHLAMV*VLLVFFLRALFRAP Trigger: GGGTGCCCTGAACAGGGCTCTGAGGAAGAAAACAAGTAAAACCAAGACCATGGCAAGATGGCTTCTCACCCTGCAGGTGGCTCCCAAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054414.5 |
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| 3UTR-3UTR TCA 90 bp | ATTTCACCCTTCTCTGCACCGACGAGCTTCTTCTACAAGCTGAACAAACACCTAGAGCCACCTGCAGGGTaGGAAGCCATCTTGCCATGG | + |
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Preference number: 2 (lower is better) Translates to: ISPFSAPTSFFYKLNKHLEPPAG*EAILPW Trigger: CCATGGCAAGATGGCTTCTCACCCTGCAGGTGGCTC...TAGGTGTTTGTTCAGCTTGTAGAAGAAGCTCGTCGGTGCAGAGAAGGGTGAAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054414.5 |
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| 3UTR CAA 90 bp | GGTTTGGTTTGGGGACAGGCTTTCACTGTATTGTCCAGGCCATCCTaGAATCTAAGATCTCTTGGCCTTATCCCCGGAGTAGCTAGAATT | + |
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Preference number: 2 (lower is better) Translates to: GLVWGQAFTVLSRPS*NLRSLGLIPGVARI Trigger: AATTCTAGCTACTCCGGGGATAAGGCCAAGAGATCTTAGATTCAAGGATGGCCTGGACAATACAGTGAAAGCCTGTCCCCAAACCAAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054414.5 |
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| 3UTR CAA 90 bp | GGTGTGCCCACCACAGGCTCATCCAGTTTACATTTGTTTGTTTGCTaGCTTGTTTGTTTGTTTGTTTCTGCAAGACAGGGTTTCTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: GVPTTGSSSLHLFVC*LVCLFVSARQGFSV Trigger: CACAGAGAAACCCTGTCTTGCAGAAACAAACAAACAAACAAGCAAGCAAACAAACAAATGTAAACTGGATGAGCCTGTGGTGGGCACACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054414.5 |
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| 3UTR CAA 90 bp | TGCCCACCACAGGCTCATCCAGTTTACATTTGTTTGTTTGCTTGCTaGTTTGTTTGTTTGTTTCTGCAAGACAGGGTTTCTCTGTGTAGC | + |
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Preference number: 2 (lower is better) Translates to: CPPQAHPVYICLFAC*FVCLFLQDRVSLCS Trigger: GCTACACAGAGAAACCCTGTCTTGCAGAAACAAACAAACAAACAAGCAAGCAAACAAACAAATGTAAACTGGATGAGCCTGTGGTGGGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054414.5 |
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| 3UTR-3UTR TCA 90 bp | GGTGAGTACCGTCATGCCCTAACTGTTCTAACTTTTAATACAACTAATATTCAGGTAACCAGGCTTCAATaGAGCATCCTCTATAATAAG | + |
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Preference number: 2 (lower is better) Translates to: GEYRHALTVLTFNTTNIQVTRLQ*SILYNK Trigger: CTTATTATAGAGGATGCTTCATTGAAGCCTGGTTAC...CTGAATATTAGTTGTATTAAAAGTTAGAACAGTTAGGGCATGACGGTACTCACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054414.5 |
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| 3UTR GCA 72 bp | CCACCCAGCAGGGCTCTGAACCTCTTGGGAGCCACCTaGAGGGTGAGAAGCCATCTTGCCATGGTCTTGGTT | + |
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Preference number: 3 (lower is better) Translates to: PPSRALNLLGAT*RVRSHLAMVLV Trigger: AACCAAGACCATGGCAAGATGGCTTCTCACCCTGCAGGTGGCTCCCAAGAGGTTCAGAGCCCTGCTGGGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054414.5 |
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| 3UTR GCA 72 bp | GTAGACCAGGCTGGCCTCGACTTACAGAAATCCACCTaGCTGGCCTGTCGAGCGCTGGGATTAAAGGTGTGC | + |
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Preference number: 3 (lower is better) Translates to: VDQAGLDLQKST*LACRALGLKVC Trigger: GCACACCTTTAATCCCAGCGCTCGACAGGCCAGGCAGGTGGATTTCTGTAAGTCGAGGCCAGCCTGGTCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054414.5 |
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| 3UTR-3UTR CAA 90 bp | CCTCCACCCAGCAGGGCTCTGAACCTCTTGGGAGCCACCTGCAGGGTGAGAAGCTGGTCTTGGTTTTACTaGTTTTCTTCCTCAGAGCCC | + |
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Preference number: 3 (lower is better) Translates to: PPPSRALNLLGATCRVRSWSWFY*FSSSEP Trigger: GGGCTCTGAGGAAGAAAACAAGTAAAACCAAGACCA...GCTTCTCACCCTGCAGGTGGCTCCCAAGAGGTTCAGAGCCCTGCTGGGTGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054414.5 |
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| 3UTR TCA 72 bp | TTTTCTTCCTCAGAGCCCTGTTCAGGGCACCCTGACTaGAACAAGGCGAGCAGGTGCTGGGTGTGTGGAGCT | + |
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Preference number: 3 (lower is better) Translates to: FSSSEPCSGHPD*NKASRCWVCGA Trigger: AGCTCCACACACCCAGCACCTGCTCGCCTTGTTTCAGTCAGGGTGCCCTGAACAGGGCTCTGAGGAAGAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
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| 3UTR TCA 72 bp | CTTGTTTTCTTCCTCAGAGCCCTGTTCAGGGCACCCTaGCTGAAACAAGGCGAGCAGGTGCTGGGTGTGTGG | + |
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Preference number: 3 (lower is better) Translates to: LVFFLRALFRAP*LKQGEQVLGVW Trigger: CCACACACCCAGCACCTGCTCGCCTTGTTTCAGTCAGGGTGCCCTGAACAGGGCTCTGAGGAAGAAAACAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
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| 3UTR-3UTR CAA 90 bp | AGCTCTGTAGACCAGGCTGGCCTCGACTTACAGAAATCCACCTGCCTGGCCTGTTCATTTGGTTTTGATTaGGGTTTGGGTTTGGTTTGG | + |
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Preference number: 3 (lower is better) Translates to: SSVDQAGLDLQKSTCLACSFGFD*GLGLVW Trigger: CCAAACCAAACCCAAACCCAAATCAAAACCAAATGA...ACAGGCCAGGCAGGTGGATTTCTGTAAGTCGAGGCCAGCCTGGTCTACAGAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054414.5 |
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| 3UTR CCA 72 bp | TCTTTTCAAGACAAAGTCTCACTAAATAGCCTTGGCTaGTCTGGAACTAGCTCTGTAGACCAGGCTGGCCTC | + |
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Preference number: 3 (lower is better) Translates to: SFQDKVSLNSLG*SGTSSVDQAGL Trigger: GAGGCCAGCCTGGTCTACAGAGCTAGTTCCAGACCAGCCAAGGCTATTTAGTGAGACTTTGTCTTGAAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054414.5 |
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| 3UTR CCA 72 bp | GTTTTGATTTGGGTTTGGGTTTGGTTTGGTTTGGTTTaGGGACAGGCTTTCACTGTATTGTCCAGGCCATCC | + |
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Preference number: 3 (lower is better) Translates to: VLIWVWVWFGLV*GQAFTVLSRPS Trigger: GGATGGCCTGGACAATACAGTGAAAGCCTGTCCCCAAACCAAACCAAACCAAACCCAAACCCAAATCAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054414.5 |
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| 3UTR GCA 72 bp | CACCTATCACAATTAAAACATACCAGAAAGCCAAACTaGACGGACATTTCAACCGATGTGTGTTCTACACAC | + |
|
Preference number: 3 (lower is better) Translates to: HLSQLKHTRKPN*TDISTDVCSTH Trigger: GTGTGTAGAACACACATCGGTTGAAATGTCCGTGCAGTTTGGCTTTCTGGTATGTTTTAATTGTGATAGGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054414.5 |
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| 3UTR CCA 72 bp | ATGTCAGATCCTCATTTCTCCAGACATCTGGCTTTATaGAATACAGCATGTCCAAGAATTCTAGGTAGTTCA | + |
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Preference number: 3 (lower is better) Translates to: MSDPHFSRHLAL*NTACPRILGSS Trigger: TGAACTACCTAGAATTCTTGGACATGCTGTATTCCATAAAGCCAGATGTCTGGAGAAATGAGGATCTGACAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054414.5 |
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| 3UTR TCA 72 bp | AACACCCTTATCTCTACGCTTGTAACCAGGCTTCAATaGAGCATCCTCTATAATAAGAGAATCAAGATGTCA | + |
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Preference number: 3 (lower is better) Translates to: NTLISTLVTRLQ*SILYNKRIKMS Trigger: TGACATCTTGATTCTCTTATTATAGAGGATGCTTCATTGAAGCCTGGTTACAAGCGTAGAGATAAGGGTGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054414.5 |
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| CDS-3UTR TCA 90 bp | ACAAGGCGAGCAGGTGCTGGGTGTGTGGAGCTTGTTAACGCCATGTTACCCCCACTGTGTAGCAAGTGCTaGACAAGAGGCCTGGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: TRRAGAGCVELVNAMLPPLCSKC*TRGLGG Trigger: CCCTCCCAGGCCTCTTGTTCAGCACTTGCTACACAG...TGGGGGTAACATGGCGTTAACAAGCTCCACACACCCAGCACCTGCTCGCCTTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
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| CDS-3UTR TCA 90 bp | ACCCTGACTGAAACAAGGCGAGCAGGTGCTGGGTGTGTGGAGCTTGTTAACGCCTCCAAGGTGCAGTCCTaGAGGACTTCAAGCTCCACC | + |
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Preference number: 4 (lower is better) Translates to: TLTETRRAGAGCVELVNASKVQS*RTSSST Trigger: GGTGGAGCTTGAAGTCCTTCAGGACTGCACCTTGGA...GGCGTTAACAAGCTCCACACACCCAGCACCTGCTCGCCTTGTTTCAGTCAGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
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| CDS-3UTR TCA 90 bp | GAAACAAGGCGAGCAGGTGCTGGGTGTGTGGAGCTTGTTAACGCCATGTTACCCGCGTCACGGAAGTCATaGTCCACAGTGGACTGCGTG | + |
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Preference number: 4 (lower is better) Translates to: ETRRAGAGCVELVNAMLPASRKS*STVDCV Trigger: CACGCAGTCCACTGTGGATCATGACTTCCGTGACGC...GGGTAACATGGCGTTAACAAGCTCCACACACCCAGCACCTGCTCGCCTTGTTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
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| CDS-3UTR TCA 90 bp | ACAAGGCGAGCAGGTGCTGGGTGTGTGGAGCTTGTTAACGCCATGTTACCCCCACCTCCCCAAATGCCTTaGTACCTTCCTTGGTGCAAG | + |
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Preference number: 4 (lower is better) Translates to: TRRAGAGCVELVNAMLPPPPQMP*YLPWCK Trigger: CTTGCACCAAGGAAGGTATCAAGGCATTTGGGGAGG...TGGGGGTAACATGGCGTTAACAAGCTCCACACACCCAGCACCTGCTCGCCTTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
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| CDS-3UTR TCA 90 bp | TTTCTTCCTCAGAGCCCTGTTCAGGGCACCCTGACTGAAACAAGGCGAGCAGGTTCCAAGGTGCAGTCCTaGAGGACTTCAAGCTCCACC | + |
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Preference number: 4 (lower is better) Translates to: FLPQSPVQGTLTETRRAGSKVQS*RTSSST Trigger: GGTGGAGCTTGAAGTCCTTCAGGACTGCACCTTGGA...ACCTGCTCGCCTTGTTTCAGTCAGGGTGCCCTGAACAGGGCTCTGAGGAAGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
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| CDS-3UTR CCA 90 bp | AGCTCTGTAGACCAGGCTGGCCTCGACTTACAGAAATCCACCTGCCTGGCCTGTACAGCAAATCCGAGATaGCCAGGTTCAGCAGGTACA | + |
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Preference number: 4 (lower is better) Translates to: SSVDQAGLDLQKSTCLACTANPR*PGSAGT Trigger: TGTACCTGCTGAACCTGGCCATCTCGGATTTGCTGT...ACAGGCCAGGCAGGTGGATTTCTGTAAGTCGAGGCCAGCCTGGTCTACAGAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054414.5 |
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| CDS-3UTR CCA 90 bp | TTTCTTCCTCAGAGCCCTGTTCAGGGCACCCTGACTGAAACAAGGCGAGCAGGTGCGTGTAAGAGGAGCTaGACATGTCAGCCGAGTAGA | + |
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Preference number: 4 (lower is better) Translates to: FLPQSPVQGTLTETRRAGACKRS*TCQPSR Trigger: TCTACTCGGCTGACATGTCCAGCTCCTCTTACACGC...ACCTGCTCGCCTTGTTTCAGTCAGGGTGCCCTGAACAGGGCTCTGAGGAAGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
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| CDS-3UTR GCA 90 bp | CTGACTGAAACAAGGCGAGCAGGTGCTGGGTGTGTGGAGCTTGTTAACGCCATGCCGAGTACTGGGTTTTaGAGTACGTGTGGTTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: LTETRRAGAGCVELVNAMPSTGF*STCGCA Trigger: AGCACAACCACACGTACTGCAAAACCCAGTACTCGG...CATGGCGTTAACAAGCTCCACACACCCAGCACCTGCTCGCCTTGTTTCAGTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
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| CDS-3UTR GCA 90 bp | GAAACAAGGCGAGCAGGTGCTGGGTGTGTGGAGCTTGTTAACGCCATGTTACCCGGTACCTCTCCAAGGTaGAGTCCTGAAGGACTTCAA | + |
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Preference number: 4 (lower is better) Translates to: ETRRAGAGCVELVNAMLPGTSPR*SPEGLQ Trigger: TTGAAGTCCTTCAGGACTGCACCTTGGAGAGGTACC...GGGTAACATGGCGTTAACAAGCTCCACACACCCAGCACCTGCTCGCCTTGTTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
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| CDS-3UTR CCA 90 bp | CTGACTGAAACAAGGCGAGCAGGTGCTGGGTGTGTGGAGCTTGTTAACGCCATGAGTCATGATCCACAGTaGACTGCGTGTAAGAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: LTETRRAGAGCVELVNAMSHDPQ*TACKRS Trigger: GCTCCTCTTACACGCAGTCCACTGTGGATCATGACT...CATGGCGTTAACAAGCTCCACACACCCAGCACCTGCTCGCCTTGTTTCAGTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
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| CDS-3UTR TCA 90 bp | CTGAAACAAGGCGAGCAGGTGCTGGGTGTGTGGAGCTTGTTAACGCCATGTTACCACCAGGTACATCCATaGAACGATCTTGCACAGACC | + |
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Preference number: 4 (lower is better) Translates to: LKQGEQVLGVWSLLTPCYHQVHP*NDLAQT Trigger: GGTCTGTGCAAGATCGTTTCATGGATGTACCTGGTG...GTAACATGGCGTTAACAAGCTCCACACACCCAGCACCTGCTCGCCTTGTTTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
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| CDS-3UTR TCA 90 bp | CTTGGTTTTACTTGTTTTCTTCCTCAGAGCCCTGTTCAGGGCACCCTGACTGAAGCGTCACGGAAGTCATaGTCCACAGTGGACTGCGTG | + |
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Preference number: 4 (lower is better) Translates to: LGFTCFLPQSPVQGTLTEASRKS*STVDCV Trigger: CACGCAGTCCACTGTGGATCATGACTTCCGTGACGC...TTCAGTCAGGGTGCCCTGAACAGGGCTCTGAGGAAGAAAACAAGTAAAACCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
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| CDS-3UTR GCA 90 bp | CTGAAACAAGGCGAGCAGGTGCTGGGTGTGTGGAGCTTGTTAACGCCATGTTACATAGGTCAGGGTCCTTaGCTTCAAGGAGAATACCGC | + |
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Preference number: 4 (lower is better) Translates to: LKQGEQVLGVWSLLTPCYIGQGP*LQGEYR Trigger: GCGGTATTCTCCTTGAAGGCAAGGACCCTGACCTAT...GTAACATGGCGTTAACAAGCTCCACACACCCAGCACCTGCTCGCCTTGTTTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
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| CDS-3UTR GCA 90 bp | TGTTTTCTTCCTCAGAGCCCTGTTCAGGGCACCCTGACTGAAACAAGGCGAGCACCGAGTACTGGGTTTTaGAGTACGTGTGGTTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: CFLPQSPVQGTLTETRRAPSTGF*STCGCA Trigger: AGCACAACCACACGTACTGCAAAACCCAGTACTCGG...TGCTCGCCTTGTTTCAGTCAGGGTGCCCTGAACAGGGCTCTGAGGAAGAAAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
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| CDS-3UTR CCA 90 bp | CTGAAACAAGGCGAGCAGGTGCTGGGTGTGTGGAGCTTGTTAACGCCATGTTACACAGCAAATCCGAGATaGCCAGGTTCAGCAGGTACA | + |
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Preference number: 4 (lower is better) Translates to: LKQGEQVLGVWSLLTPCYTANPR*PGSAGT Trigger: TGTACCTGCTGAACCTGGCCATCTCGGATTTGCTGT...GTAACATGGCGTTAACAAGCTCCACACACCCAGCACCTGCTCGCCTTGTTTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
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| CDS-3UTR CCA 90 bp | TGTTTTCTTCCTCAGAGCCCTGTTCAGGGCACCCTGACTGAAACAAGGCGAGCAGAGTTGACCGAGTACTaGGTTTTGCAGTACGTGTGG | + |
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Preference number: 4 (lower is better) Translates to: CFLPQSPVQGTLTETRRAELTEY*VLQYVW Trigger: CCACACGTACTGCAAAACCCAGTACTCGGTCAACTC...TGCTCGCCTTGTTTCAGTCAGGGTGCCCTGAACAGGGCTCTGAGGAAGAAAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
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| CDS-3UTR TCA 90 bp | ACTTGTTTTCTTCCTCAGAGCCCTGTTCAGGGCACCCTGACTGAAACAAGGCGACACCAGGTACATCCATaGAACGATCTTGCACAGACC | + |
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Preference number: 4 (lower is better) Translates to: TCFLPQSPVQGTLTETRRHQVHP*NDLAQT Trigger: GGTCTGTGCAAGATCGTTTCATGGATGTACCTGGTG...TCGCCTTGTTTCAGTCAGGGTGCCCTGAACAGGGCTCTGAGGAAGAAAACAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
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| CDS-3UTR GCA 90 bp | ACTGAAACAAGGCGAGCAGGTGCTGGGTGTGTGGAGCTTGTTAACGCCATGTTAGGTACCTCTCCAAGGTaGAGTCCTGAAGGACTTCAA | + |
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Preference number: 4 (lower is better) Translates to: TETRRAGAGCVELVNAMLGTSPR*SPEGLQ Trigger: TTGAAGTCCTTCAGGACTGCACCTTGGAGAGGTACC...TAACATGGCGTTAACAAGCTCCACACACCCAGCACCTGCTCGCCTTGTTTCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
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| 3UTR CAA 72 bp | GCCACCTGCAGGGTGAGAAGCCATCTTGCCATGGTCTaGGTTTTACTTGTTTTCTTCCTCAGAGCCCTGTTC | + |
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Preference number: 4 (lower is better) Translates to: ATCRVRSHLAMV*VLLVFFLRALF Trigger: GAACAGGGCTCTGAGGAAGAAAACAAGTAAAACCAAGACCATGGCAAGATGGCTTCTCACCCTGCAGGTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054414.5 |
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| CDS-3UTR GCA 90 bp | CTTGGTTTTACTTGTTTTCTTCCTCAGAGCCCTGTTCAGGGCACCCTGACTGAACCACGGCGAAGATCATaGGCACTGCTCTGTTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: LGFTCFLPQSPVQGTLTEPRRRS*ALLCSS Trigger: AGAAGAACAGAGCAGTGCGCATGATCTTCGCCGTGG...TTCAGTCAGGGTGCCCTGAACAGGGCTCTGAGGAAGAAAACAAGTAAAACCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
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| CDS-3UTR CCA 90 bp | CTTGGTTTTACTTGTTTTCTTCCTCAGAGCCCTGTTCAGGGCACCCTGACTGAAATACCGCGTGCACGATaGCCAGGTATCTGTCTATGC | + |
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Preference number: 4 (lower is better) Translates to: LGFTCFLPQSPVQGTLTEIPRAR*PGICLC Trigger: GCATAGACAGATACCTGGCCATCGTGCACGCGGTAT...TTCAGTCAGGGTGCCCTGAACAGGGCTCTGAGGAAGAAAACAAGTAAAACCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
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| CDS-3UTR CCA 90 bp | ACATACCAGAAAGCCAAACTGCACGGACATTTCAACCGATGTGTGTTCTACACAGCTGAACAAGAGGCCTaGGAGGGAGGCAAACACAGC | + |
|
Preference number: 4 (lower is better) Translates to: TYQKAKLHGHFNRCVFYTAEQEA*EGGKHS Trigger: GCTGTGTTTGCCTCCCTCCCAGGCCTCTTGTTCAGC...TGTGTAGAACACACATCGGTTGAAATGTCCGTGCAGTTTGGCTTTCTGGTATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054414.5 |
||
| 3UTR CAA 72 bp | TGGGGACAGGCTTTCACTGTATTGTCCAGGCCATCCTaGAATCTAAGATCTCTTGGCCTTATCCCCGGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: WGQAFTVLSRPS*NLRSLGLIPGV Trigger: TACTCCGGGGATAAGGCCAAGAGATCTTAGATTCAAGGATGGCCTGGACAATACAGTGAAAGCCTGTCCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054414.5 |
||
| CDS-3UTR GCA 90 bp | CTTGGTTTTACTTGTTTTCTTCCTCAGAGCCCTGTTCAGGGCACCCTGACTGAAATAGGTCAGGGTCCTTaGCTTCAAGGAGAATACCGC | + |
|
Preference number: 4 (lower is better) Translates to: LGFTCFLPQSPVQGTLTEIGQGP*LQGEYR Trigger: GCGGTATTCTCCTTGAAGGCAAGGACCCTGACCTAT...TTCAGTCAGGGTGCCCTGAACAGGGCTCTGAGGAAGAAAACAAGTAAAACCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
||
| CDS-3UTR CCA 90 bp | CTTGGTTTTACTTGTTTTCTTCCTCAGAGCCCTGTTCAGGGCACCCTGACTGAAGAGTTGACCGAGTACTaGGTTTTGCAGTACGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LGFTCFLPQSPVQGTLTEELTEY*VLQYVW Trigger: CCACACGTACTGCAAAACCCAGTACTCGGTCAACTC...TTCAGTCAGGGTGCCCTGAACAGGGCTCTGAGGAAGAAAACAAGTAAAACCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
||
| CDS-3UTR CCA 90 bp | ATTTCACCCTTCTCTGCACCGACGAGCTTCTTCTACAAGCTGAACAAACACCTAGCGTGTAAGAGGAGCTaGACATGTCAGCCGAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: ISPFSAPTSFFYKLNKHLACKRS*TCQPSR Trigger: TCTACTCGGCTGACATGTCCAGCTCCTCTTACACGC...TAGGTGTTTGTTCAGCTTGTAGAAGAAGCTCGTCGGTGCAGAGAAGGGTGAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054414.5 |
||
| CDS-3UTR CCA 90 bp | ATTTCACCCTTCTCTGCACCGACGAGCTTCTTCTACAAGCTGAACAAACACCTAAGTCATGATCCACAGTaGACTGCGTGTAAGAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ISPFSAPTSFFYKLNKHLSHDPQ*TACKRS Trigger: GCTCCTCTTACACGCAGTCCACTGTGGATCATGACT...TAGGTGTTTGTTCAGCTTGTAGAAGAAGCTCGTCGGTGCAGAGAAGGGTGAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054414.5 |
||
| 3UTR CAA 72 bp | TGGTTTGGTTTGGTTTGGGGACAGGCTTTCACTGTATaGTCCAGGCCATCCTTGAATCTAAGATCTCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: WFGLVWGQAFTV*SRPSLNLRSLG Trigger: GCCAAGAGATCTTAGATTCAAGGATGGCCTGGACAATACAGTGAAAGCCTGTCCCCAAACCAAACCAAACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054414.5 |
||
| CDS-3UTR CCA 90 bp | GGTGAGTACCGTCATGCCCTAACTGTTCTAACTTTTAATACAACTAATATTCAGATACCGCGTGCACGATaGCCAGGTATCTGTCTATGC | + |
|
Preference number: 4 (lower is better) Translates to: GEYRHALTVLTFNTTNIQIPRAR*PGICLC Trigger: GCATAGACAGATACCTGGCCATCGTGCACGCGGTAT...CTGAATATTAGTTGTATTAAAAGTTAGAACAGTTAGGGCATGACGGTACTCACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054414.5 |
||
| CDS-3UTR TCA 90 bp | TATAATAAGAGAATCAAGATGTCAGATCCTCATTTCTCCAGACATCTGGCTTTACCTCCCCAAATGCCTTaGTACCTTCCTTGGTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: YNKRIKMSDPHFSRHLALPPQMP*YLPWCK Trigger: CTTGCACCAAGGAAGGTATCAAGGCATTTGGGGAGG...TAAAGCCAGATGTCTGGAGAAATGAGGATCTGACATCTTGATTCTCTTATTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054414.5 |
||
| CDS-3UTR CAA 90 bp | GGCACCCTGACTGAAACAAGGCGAGCAGGTGCTGGGTGTGTGGAGCTTGTTAACAGCAGCCCCAGGACGTaGATCTCCAGGGAGCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GTLTETRRAGAGCVELVNSSPRT*ISRELR Trigger: CCTCAGCTCCCTGGAGATCAACGTCCTGGGGCTGCT...GTTAACAAGCTCCACACACCCAGCACCTGCTCGCCTTGTTTCAGTCAGGGTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
||
| CDS-3UTR CAA 90 bp | CTGAAACAAGGCGAGCAGGTGCTGGGTGTGTGGAGCTTGTTAACGCCATGTTACAGCAGCCCCAGGACGTaGATCTCCAGGGAGCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LKQGEQVLGVWSLLTPCYSSPRT*ISRELR Trigger: CCTCAGCTCCCTGGAGATCAACGTCCTGGGGCTGCT...GTAACATGGCGTTAACAAGCTCCACACACCCAGCACCTGCTCGCCTTGTTTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
||
| CDS-3UTR CAA 90 bp | ACCCTGACTGAAACAAGGCGAGCAGGTGCTGGGTGTGTGGAGCTTGTTAACGCCAGGAAGTCACAGTGTTaGCAGAGCACGAGGGGACCC | + |
|
Preference number: 5 (lower is better) Translates to: TLTETRRAGAGCVELVNARKSQC*QSTRGP Trigger: GGGTCCCCTCGTGCTCTGCAAACACTGTGACTTCCT...GGCGTTAACAAGCTCCACACACCCAGCACCTGCTCGCCTTGTTTCAGTCAGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
||
| CDS GCA 90 bp | ACGGCGTCCAGAAGCCGAGGAAGAGGACCACCACGGCGAAGATCATaGGCACTGCTCTGTTCTTCTTCTCATTCTTGCAGTGTTGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: TASRSRGRGPPRRRS*ALLCSSSHSCSVAE Trigger: CTCTGCAACACTGCAAGAATGAGAAGAAGAACAGAGCAGTGCGCATGATCTTCGCCGTGGTGGTCCTCTTCCTCGGCTTCTGGACGCCGT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
||
| CDS-3UTR CAA 90 bp | GGCACCCTGACTGAAACAAGGCGAGCAGGTGCTGGGTGTGTGGAGCTTGTTAACGCCTTGATACCTTCCTaGGTGCAAGGCTTTGGCATG | + |
|
Preference number: 5 (lower is better) Translates to: GTLTETRRAGAGCVELVNALIPS*VQGFGM Trigger: CATGCCAAAGCCTTGCACCAAGGAAGGTATCAAGGC...GTTAACAAGCTCCACACACCCAGCACCTGCTCGCCTTGTTTCAGTCAGGGTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
||
| CDS-3UTR CAA 90 bp | ACCCTGACTGAAACAAGGCGAGCAGGTGCTGGGTGTGTGGAGCTTGTTAACGCCTTCCACGTCGTCGAGTaGACCGAGTACTGGGTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: TLTETRRAGAGCVELVNAFHVVE*TEYWVL Trigger: CAAAACCCAGTACTCGGTCAACTCGACGACGTGGAA...GGCGTTAACAAGCTCCACACACCCAGCACCTGCTCGCCTTGTTTCAGTCAGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
||
| CDS-3UTR CAA 90 bp | CAGGGCACCCTGACTGAAACAAGGCGAGCAGGTGCTGGGTGTGTGGAGCTTGTTAGTTGGGTGATGTACTaGCGGAATTTCTCCCCGAGA | + |
|
Preference number: 5 (lower is better) Translates to: QGTLTETRRAGAGCVELVSWVMY*RNFSPR Trigger: TCTCGGGGAGAAATTCCGCAAGTACATCACCCAACT...AACAAGCTCCACACACCCAGCACCTGCTCGCCTTGTTTCAGTCAGGGTGCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
||
| CDS GCA 90 bp | AGATGCCGCTGTAGAAGCCCACCAGGTACATCCATGAAACGATCTTaGACAGACCTAGTCCAAAAACCCACTGGTCGGCGGCGTAGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: RCRCRSPPGTSMKRS*TDLVQKPTGRRRSS Trigger: GCTACTACGCCGCCGACCAGTGGGTTTTTGGACTAGGTCTGTGCAAGATCGTTTCATGGATGTACCTGGTGGGCTTCTACAGCGGCATCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
||
| CDS CCA 90 bp | CGTCACGGAAGTCATGATCCACAGTGGACTGCGTGTAAGAGGAGCTaGACATGTCAGCCGAGTAGACCTGGAGGAAGTCACAGTGTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: RHGSHDPQWTACKRS*TCQPSRPGGSHSVC Trigger: GCAAACACTGTGACTTCCTCCAGGTCTACTCGGCTGACATGTCCAGCTCCTCTTACACGCAGTCCACTGTGGATCATGACTTCCGTGACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
||
| CDS-3UTR CAA 90 bp | AGCTCTGTAGACCAGGCTGGCCTCGACTTACAGAAATCCACCTGCCTGGCCTGTACCTCCCCAAATGCCTaGATACCTTCCTTGGTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: SSVDQAGLDLQKSTCLACTSPNA*IPSLVQ Trigger: TTGCACCAAGGAAGGTATCAAGGCATTTGGGGAGGT...ACAGGCCAGGCAGGTGGATTTCTGTAAGTCGAGGCCAGCCTGGTCTACAGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054414.5 |
||
| CDS-3UTR CAA 90 bp | TGTTTTCTTCCTCAGAGCCCTGTTCAGGGCACCCTGACTGAAACAAGGCGAGCATTCCACGTCGTCGAGTaGACCGAGTACTGGGTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: CFLPQSPVQGTLTETRRAFHVVE*TEYWVL Trigger: CAAAACCCAGTACTCGGTCAACTCGACGACGTGGAA...TGCTCGCCTTGTTTCAGTCAGGGTGCCCTGAACAGGGCTCTGAGGAAGAAAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
||
| CDS GCA 90 bp | CCAGAAGCCGAGGAAGAGGACCACCACGGCGAAGATCATGCGCACTaGTCTGTTCTTCTTCTCATTCTTGCAGTGTTGCAGAGTCCTAAT | + |
|
Preference number: 5 (lower is better) Translates to: PEAEEEDHHGEDHAH*SVLLLILAVLQSPN Trigger: ATTAGGACTCTGCAACACTGCAAGAATGAGAAGAAGAACAGAGCAGTGCGCATGATCTTCGCCGTGGTGGTCCTCTTCCTCGGCTTCTGG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
||
| CDS-3UTR CAA 90 bp | CTGAAACAAGGCGAGCAGGTGCTGGGTGTGTGGAGCTTGTTAACGCCATGTTACCCTTGGTGCAAGGCTTaGGCATGCTTTCGTAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: LKQGEQVLGVWSLLTPCYPWCKA*ACFRRS Trigger: ACTTCTACGAAAGCATGCCAAAGCCTTGCACCAAGG...GTAACATGGCGTTAACAAGCTCCACACACCCAGCACCTGCTCGCCTTGTTTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
||
| CDS-3UTR CAA 90 bp | GAAACAAGGCGAGCAGGTGCTGGGTGTGTGGAGCTTGTTAACGCCATGTTACCCACGTCCGTCATGGACTaGAGCCTCTTGTATTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: ETRRAGAGCVELVNAMLPTSVMD*SLLYLN Trigger: GTTCAAATACAAGAGGCTCAAGTCCATGACGGACGT...GGGTAACATGGCGTTAACAAGCTCCACACACCCAGCACCTGCTCGCCTTGTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
||
| CDS-3UTR CAA 90 bp | CTTCCTCAGAGCCCTGTTCAGGGCACCCTGACTGAAACAAGGCGAGCAGGTGCTATCCATGAAACGATCTaGCACAGACCTAGTCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: LPQSPVQGTLTETRRAGAIHETI*HRPSPK Trigger: TTTTGGACTAGGTCTGTGCAAGATCGTTTCATGGAT...AGCACCTGCTCGCCTTGTTTCAGTCAGGGTGCCCTGAACAGGGCTCTGAGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
||
| CDS-3UTR CAA 90 bp | ACTTGTTTTCTTCCTCAGAGCCCTGTTCAGGGCACCCTGACTGAAACAAGGCGACCTTGGTGCAAGGCTTaGGCATGCTTTCGTAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: TCFLPQSPVQGTLTETRRPWCKA*ACFRRS Trigger: ACTTCTACGAAAGCATGCCAAAGCCTTGCACCAAGG...TCGCCTTGTTTCAGTCAGGGTGCCCTGAACAGGGCTCTGAGGAAGAAAACAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
||
| CDS-3UTR CAA 90 bp | TTTCTTCCTCAGAGCCCTGTTCAGGGCACCCTGACTGAAACAAGGCGAGCAGGTATGGACTTGAGCCTCTaGTATTTGAACAGGACCAGA | + |
|
Preference number: 5 (lower is better) Translates to: FLPQSPVQGTLTETRRAGMDLSL*YLNRTR Trigger: TCTGGTCCTGTTCAAATACAAGAGGCTCAAGTCCAT...ACCTGCTCGCCTTGTTTCAGTCAGGGTGCCCTGAACAGGGCTCTGAGGAAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
||
| CDS-3UTR CAA 90 bp | GGTTTTACTTGTTTTCTTCCTCAGAGCCCTGTTCAGGGCACCCTGACTGAAACAGCCTTGATACCTTCCTaGGTGCAAGGCTTTGGCATG | + |
|
Preference number: 5 (lower is better) Translates to: GFTCFLPQSPVQGTLTETALIPS*VQGFGM Trigger: CATGCCAAAGCCTTGCACCAAGGAAGGTATCAAGGC...TGTTTCAGTCAGGGTGCCCTGAACAGGGCTCTGAGGAAGAAAACAAGTAAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
||
| CDS-3UTR CAA 90 bp | ACATACCAGAAAGCCAAACTGCACGGACATTTCAACCGATGTGTGTTCTACACAAGGAAGTCACAGTGTTaGCAGAGCACGAGGGGACCC | + |
|
Preference number: 5 (lower is better) Translates to: TYQKAKLHGHFNRCVFYTRKSQC*QSTRGP Trigger: GGGTCCCCTCGTGCTCTGCAAACACTGTGACTTCCT...TGTGTAGAACACACATCGGTTGAAATGTCCGTGCAGTTTGGCTTTCTGGTATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054414.5 |
||
| CDS-3UTR CAA 90 bp | TCAAGGGCTCATTGTCATGAAGGGGTGATTTCCTCCACCCAGCAGGGCTCTGAAATCCATGAAACGATCTaGCACAGACCTAGTCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: SRAHCHEGVISSTQQGSEIHETI*HRPSPK Trigger: TTTTGGACTAGGTCTGTGCAAGATCGTTTCATGGAT...TTCAGAGCCCTGCTGGGTGGAGGAAATCACCCCTTCATGACAATGAGCCCTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054414.5 |
||
| CDS-3UTR CAA 90 bp | CTGAAACAAGGCGAGCAGGTGCTGGGTGTGTGGAGCTTGTTAACGCCATGTTACTTCTTCTTCTCATTCTaGCAGTGTTGCAGAGTCCTA | + |
|
Preference number: 5 (lower is better) Translates to: LKQGEQVLGVWSLLTPCYFFFSF*QCCRVL Trigger: TAGGACTCTGCAACACTGCAAGAATGAGAAGAAGAA...GTAACATGGCGTTAACAAGCTCCACACACCCAGCACCTGCTCGCCTTGTTTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
||
| CDS-3UTR CAA 90 bp | CTTGGTTTTACTTGTTTTCTTCCTCAGAGCCCTGTTCAGGGCACCCTGACTGAAACGTCCGTCATGGACTaGAGCCTCTTGTATTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: LGFTCFLPQSPVQGTLTETSVMD*SLLYLN Trigger: GTTCAAATACAAGAGGCTCAAGTCCATGACGGACGT...TTCAGTCAGGGTGCCCTGAACAGGGCTCTGAGGAAGAAAACAAGTAAAACCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
||
| CDS-3UTR CAA 90 bp | ATTTCACCCTTCTCTGCACCGACGAGCTTCTTCTACAAGCTGAACAAACACCTAAGTTGGGTGATGTACTaGCGGAATTTCTCCCCGAGA | + |
|
Preference number: 5 (lower is better) Translates to: ISPFSAPTSFFYKLNKHLSWVMY*RNFSPR Trigger: TCTCGGGGAGAAATTCCGCAAGTACATCACCCAACT...TAGGTGTTTGTTCAGCTTGTAGAAGAAGCTCGTCGGTGCAGAGAAGGGTGAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054414.5 |
||
| CDS-3UTR CAA 90 bp | GGTTTTACTTGTTTTCTTCCTCAGAGCCCTGTTCAGGGCACCCTGACTGAAACAATGGACTTGAGCCTCTaGTATTTGAACAGGACCAGA | + |
|
Preference number: 5 (lower is better) Translates to: GFTCFLPQSPVQGTLTETMDLSL*YLNRTR Trigger: TCTGGTCCTGTTCAAATACAAGAGGCTCAAGTCCAT...TGTTTCAGTCAGGGTGCCCTGAACAGGGCTCTGAGGAAGAAAACAAGTAAAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
||
| CDS CCA 90 bp | GAAGACCTCCCCAAATGCCTTGATACCTTCCTTGGTGCAAGGCTTTaGCATGCTTTCGTAGAAGTAATAACTATTGTACACAGTTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: EDLPKCLDTFLGARL*HAFVEVITIVHSFI Trigger: GATGAAACTGTGTACAATAGTTATTACTTCTACGAAAGCATGCCAAAGCCTTGCACCAAGGAAGGTATCAAGGCATTTGGGGAGGTCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
||
| CDS-3UTR CAA 90 bp | GATGTCAGATCCTCATTTCTCCAGACATCTGGCTTTATGGAATACAGCATGTCCTTCTTCTTCTCATTCTaGCAGTGTTGCAGAGTCCTA | + |
|
Preference number: 5 (lower is better) Translates to: DVRSSFLQTSGFMEYSMSFFFSF*QCCRVL Trigger: TAGGACTCTGCAACACTGCAAGAATGAGAAGAAGAA...GGACATGCTGTATTCCATAAAGCCAGATGTCTGGAGAAATGAGGATCTGACATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054414.5 |
||
| CDS TCA 72 bp | TGCAGTACGTGTGGTTGTGCTCTGTGTAGCAAGTGCTaGACAAGAGGCCTGGGAGGGAGGCAAACACAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: CSTCGCALCSKC*TRGLGGRQTQP Trigger: TGGCTGTGTTTGCCTCCCTCCCAGGCCTCTTGTTCAGCACTTGCTACACAGAGCACAACCACACGTACTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
||
| CDS CAA 90 bp | AGGACGTTGATCTCCAGGGAGCTGAGGACTTTCCACGTCGTCGAGTaGACCGAGTACTGGGTTTTGCAGTACGTGTGGTTGTGCTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: RTLISRELRTFHVVE*TEYWVLQYVWLCSV Trigger: CACAGAGCACAACCACACGTACTGCAAAACCCAGTACTCGGTCAACTCGACGACGTGGAAAGTCCTCAGCTCCCTGGAGATCAACGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
||
| CDS CCA 72 bp | AGTCATGATCCACAGTGGACTGCGTGTAAGAGGAGCTaGACATGTCAGCCGAGTAGACCTGGAGGAAGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: SHDPQWTACKRS*TCQPSRPGGSH Trigger: GTGACTTCCTCCAGGTCTACTCGGCTGACATGTCCAGCTCCTCTTACACGCAGTCCACTGTGGATCATGACT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
||
| CDS CAA 72 bp | ATCTCCAGGGAGCTGAGGACTTTCCACGTCGTCGAGTaGACCGAGTACTGGGTTTTGCAGTACGTGTGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: ISRELRTFHVVE*TEYWVLQYVWL Trigger: CAACCACACGTACTGCAAAACCCAGTACTCGGTCAACTCGACGACGTGGAAAGTCCTCAGCTCCCTGGAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
||
| CDS GCA 72 bp | TGTAGAAGCCCACCAGGTACATCCATGAAACGATCTTaGACAGACCTAGTCCAAAAACCCACTGGTCGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: CRSPPGTSMKRS*TDLVQKPTGRR Trigger: CCGCCGACCAGTGGGTTTTTGGACTAGGTCTGTGCAAGATCGTTTCATGGATGTACCTGGTGGGCTTCTACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
||
| CDS GCA 72 bp | GAGGAAGAGGACCACCACGGCGAAGATCATGCGCACTaGTCTGTTCTTCTTCTCATTCTTGCAGTGTTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: EEEDHHGEDHAH*SVLLLILAVLQ Trigger: CTGCAACACTGCAAGAATGAGAAGAAGAACAGAGCAGTGCGCATGATCTTCGCCGTGGTGGTCCTCTTCCTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
||
| CDS GCA 72 bp | AGAAGCCGAGGAAGAGGACCACCACGGCGAAGATCATaGGCACTGCTCTGTTCTTCTTCTCATTCTTGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: RSRGRGPPRRRS*ALLCSSSHSCS Trigger: ACTGCAAGAATGAGAAGAAGAACAGAGCAGTGCGCATGATCTTCGCCGTGGTGGTCCTCTTCCTCGGCTTCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
||
| CDS CAA 72 bp | TTCAGCAGGTACACGTCCGTCATGGACTTGAGCCTCTaGTATTTGAACAGGACCAGAACCACAACAGAATTT | + |
|
Preference number: 6 (lower is better) Translates to: FSRYTSVMDLSL*YLNRTRTTTEF Trigger: AAATTCTGTTGTGGTTCTGGTCCTGTTCAAATACAAGAGGCTCAAGTCCATGACGGACGTGTACCTGCTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
||
| CDS CCA 72 bp | CCCAAATGCCTTGATACCTTCCTTGGTGCAAGGCTTTaGCATGCTTTCGTAGAAGTAATAACTATTGTACAC | + |
|
Preference number: 6 (lower is better) Translates to: PKCLDTFLGARL*HAFVEVITIVH Trigger: GTGTACAATAGTTATTACTTCTACGAAAGCATGCCAAAGCCTTGCACCAAGGAAGGTATCAAGGCATTTGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054414.5 ENSMUST00000215425.2 |
||