Pregenerated sensors for CCP110 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033904Ensembl transcript IDs: ENSMUST00000038650.9, ENSMUST00000106557.8, ENSMUST00000123178.8, ENSMUST00000208766.2
Found 421 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGTCCAGGGCTAAGTCACAAGCCCCAACTAGAGTGGAATGTGGGTaGCGGCAGCCCTGCTCCCTGCTTCATCCCAGTGAGTGCTGTCTT | + |
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Preference number: 1 (lower is better) Translates to: ESRAKSQAPTRVECG*RQPCSLLHPSECCL Trigger: AAGACAGCACTCACTGGGATGAAGCAGGGAGCAGGGCTGCCGCCACCCACATTCCACTCTAGTTGGGGCTTGTGACTTAGCCCTGGACTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| 3UTR CCA 90 bp | CTGCAGAAACAGAGTCCAGGGCTAAGTCACAAGCCCCAACTAGAGTaGAATGTGGGTGGCGGCAGCCCTGCTCCCTGCTTCATCCCAGTG | + |
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Preference number: 1 (lower is better) Translates to: LQKQSPGLSHKPQLE*NVGGGSPAPCFIPV Trigger: CACTGGGATGAAGCAGGGAGCAGGGCTGCCGCCACCCACATTCCACTCTAGTTGGGGCTTGTGACTTAGCCCTGGACTCTGTTTCTGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| 3UTR GCA 90 bp | CATCAGGAGAGCCGCACCTGTGTTTCTGGCAGGAGCCCAGACTCCTaGTTCACACTTGGTCGGAGAATCATTGGTGAGGCTAAACTTACT | + |
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Preference number: 1 (lower is better) Translates to: HQESRTCVSGRSPDS*FTLGRRIIGEAKLT Trigger: AGTAAGTTTAGCCTCACCAATGATTCTCCGACCAAGTGTGAAGCAGGAGTCTGGGCTCCTGCCAGAAACACAGGTGCGGCTCTCCTGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
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| 3UTR GCA 90 bp | AAGCCCCAACTAGAGTGGAATGTGGGTGGCGGCAGCCCTGCTCCCTaGTTCATCCCAGTGAGTGCTGTCTTCTTAAATTGTCGCAACATT | + |
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Preference number: 1 (lower is better) Translates to: KPQLEWNVGGGSPAP*FIPVSAVFLNCRNI Trigger: AATGTTGCGACAATTTAAGAAGACAGCACTCACTGGGATGAAGCAGGGAGCAGGGCTGCCGCCACCCACATTCCACTCTAGTTGGGGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
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| 3UTR GCA 90 bp | ATGCATGAGGAAAGACCATGGAAAGTGGTCACTGAGGCAAACCGATaGTACTGGGCAGAACAGTACTTACGCCATAATGATCGTCCAGCC | + |
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Preference number: 1 (lower is better) Translates to: MHEERPWKVVTEANR*YWAEQYLRHNDRPA Trigger: GGCTGGACGATCATTATGGCGTAAGTACTGTTCTGCCCAGTAGCATCGGTTTGCCTCAGTGACCACTTTCCATGGTCTTTCCTCATGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
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| 3UTR TCA 90 bp | GTACGATGGTATGAAATGAGAAGTAAAAGCATGCCCACGCAGATGTaGACTAAAAGATTTACACAGCAGCGCAGCACGAGGGCTATCTGC | + |
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Preference number: 1 (lower is better) Translates to: VRWYEMRSKSMPTQM*TKRFTQQRSTRAIC Trigger: GCAGATAGCCCTCGTGCTGCGCTGCTGTGTAAATCTTTTAGTTCACATCTGCGTGGGCATGCTTTTACTTCTCATTTCATACCATCGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
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| 3UTR TCA 90 bp | TCACAAGCAACAGAGCTGCTTGATTGGTCTGACTTCTTACAAAGCTaGCGGTCTCTAAAGCAAGCAGTCTCCGACTCTCAAACAACTCCA | + |
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Preference number: 1 (lower is better) Translates to: SQATELLDWSDFLQS*RSLKQAVSDSQTTP Trigger: TGGAGTTGTTTGAGAGTCGGAGACTGCTTGCTTTAGAGACCGTCAGCTTTGTAAGAAGTCAGACCAATCAAGCAGCTCTGTTGCTTGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
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| 3UTR CCA 90 bp | GTGACAAATCATGAGATGAAATGCATGAGGAAAGACCATGGAAAGTaGTCACTGAGGCAAACCGATGCTACTGGGCAGAACAGTACTTAC | + |
|
Preference number: 1 (lower is better) Translates to: VTNHEMKCMRKDHGK*SLRQTDATGQNSTY Trigger: GTAAGTACTGTTCTGCCCAGTAGCATCGGTTTGCCTCAGTGACCACTTTCCATGGTCTTTCCTCATGCATTTCATCTCATGATTTGTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
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| 3UTR TCA 90 bp | AAGAGCACTTGCCTCCTTGCTTATAGACTCACAAGTGACAAATCATaGGATGAAATGCATGAGGAAAGACCATGGAAAGTGGTCACTGAG | + |
|
Preference number: 1 (lower is better) Translates to: KSTCLLAYRLTSDKS*DEMHEERPWKVVTE Trigger: CTCAGTGACCACTTTCCATGGTCTTTCCTCATGCATTTCATCTCATGATTTGTCACTTGTGAGTCTATAAGCAAGGAGGCAAGTGCTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGCCACAGGCCGGACAGACCACATGAGGTATGCGATGACCATTTCTGATGACCTGTGTGTCCCACTGTaGCGCCTGAGTCAGGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: AATGRTDHMRYAMTISDDLCVPL*RLSQGR Trigger: TCTGCCCTGACTCAGGCGTCACAGTGGGACACACAG...GTCATCAGAAATGGTCATCGCATACCTCATGTGGTCTGTCCGGCCTGTGGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
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| 3UTR-3UTR TCA 90 bp | TCATCTCCATCTCCTGTCCTATCCCATCAGTTCCTGCTCTACTCTGGTCCGTGGTCCCACTGTGACGCCTaGGTCAGGGCAGACTGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: SSPSPVLSHQFLLYSGPWSHCDA*VRADCA Trigger: AGCACAGTCTGCCCTGACTCAGGCGTCACAGTGGGA...CCACGGACCAGAGTAGAGCAGGAACTGATGGGATAGGACAGGAGATGGAGATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
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| 3UTR CAA 90 bp | AAGCTGACCAGATTATACAGGCCAATGCTCAGCCCTCGCTGTCCCTaGCCTGCAGAAACAGAGTCCAGGGCTAAGTCACAAGCCCCAACT | + |
|
Preference number: 2 (lower is better) Translates to: KLTRLYRPMLSPRCP*PAETESRAKSQAPT Trigger: AGTTGGGGCTTGTGACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCATTGGCCTGTATAATCTGGTCAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
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| 3UTR-3UTR GCA 90 bp | ATAGGAAATGAGGCAGGAATTGTCCAAGCTGACCAGATTATACAGGCCAATGCTGGGTGGCGGCAGCCCTaGTCCCTGCTTCATCCCAGT | + |
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Preference number: 2 (lower is better) Translates to: IGNEAGIVQADQIIQANAGWRQP*SLLHPS Trigger: ACTGGGATGAAGCAGGGAGCAGGGCTGCCGCCACCC...AGCATTGGCCTGTATAATCTGGTCAGCTTGGACAATTCCTGCCTCATTTCCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| 3UTR-3UTR GCA 90 bp | TCAGCTGACCTCATCTCCATCTCCTGTCCTATCCCATCAGTTCCTGCTCTACTCTCCCTCCCACACACCTaGGTAGTCACTGTGGATTCT | + |
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Preference number: 2 (lower is better) Translates to: SADLISISCPIPSVPALLSLPHT*VVTVDS Trigger: AGAATCCACAGTGACTACGCAGGTGTGTGGGAGGGA...GAGTAGAGCAGGAACTGATGGGATAGGACAGGAGATGGAGATGAGGTCAGCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
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| 3UTR-3UTR CCA 90 bp | ATAGGAAATGAGGCAGGAATTGTCCAAGCTGACCAGATTATACAGGCCAATGCTAGAGTGGAATGTGGGTaGCGGCAGCCCTGCTCCCTG | + |
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Preference number: 2 (lower is better) Translates to: IGNEAGIVQADQIIQANARVECG*RQPCSL Trigger: CAGGGAGCAGGGCTGCCGCCACCCACATTCCACTCT...AGCATTGGCCTGTATAATCTGGTCAGCTTGGACAATTCCTGCCTCATTTCCTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
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| 3UTR CAA 90 bp | GCCGCACCTGTGTTTCTGGCAGGAGCCCAGACTCCTGCTTCACACTaGGTCGGAGAATCATTGGTGAGGCTAAACTTACTTGACAAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: AAPVFLAGAQTPASH*VGESLVRLNLLDKE Trigger: TTCTTTGTCAAGTAAGTTTAGCCTCACCAATGATTCTCCGACCAAGTGTGAAGCAGGAGTCTGGGCTCCTGCCAGAAACACAGGTGCGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
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| 3UTR-3UTR TCA 90 bp | TCAGCTGACCTCATCTCCATCTCCTGTCCTATCCCATCAGTTCCTGCTCTACTCCACAACCCCCTTCACTaGAGTCTTAGGGGTTCTAAT | + |
|
Preference number: 2 (lower is better) Translates to: SADLISISCPIPSVPALLHNPLH*SLRGSN Trigger: ATTAGAACCCCTAAGACTTCAGTGAAGGGGGTTGTG...GAGTAGAGCAGGAACTGATGGGATAGGACAGGAGATGGAGATGAGGTCAGCTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
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| 3UTR-3UTR GCA 90 bp | TCATCTCCATCTCCTGTCCTATCCCATCAGTTCCTGCTCTACTCTGGTCCGTGGGGCTTCTGTCTATTTTaGACAACCCCCTTCACTGAA | + |
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Preference number: 2 (lower is better) Translates to: SSPSPVLSHQFLLYSGPWGFCLF*TTPFTE Trigger: TTCAGTGAAGGGGGTTGTGCAAAATAGACAGAAGCC...CCACGGACCAGAGTAGAGCAGGAACTGATGGGATAGGACAGGAGATGGAGATGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
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| 3UTR CAA 90 bp | CAGCCCTGCTCCCTGCTTCATCCCAGTGAGTGCTGTCTTCTTAAATaGTCGCAACATTTGGCCGCTTTCTTTGGGTTTTTCCTGCATATG | + |
|
Preference number: 2 (lower is better) Translates to: QPCSLLHPSECCLLK*SQHLAAFFGFFLHM Trigger: CATATGCAGGAAAAACCCAAAGAAAGCGGCCAAATGTTGCGACAATTTAAGAAGACAGCACTCACTGGGATGAAGCAGGGAGCAGGGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
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| 3UTR-3UTR CCA 90 bp | ACATTAATAGGAAATGAGGCAGGAATTGTCCAAGCTGACCAGATTATACAGGCCAAGCCCCAACTAGAGTaGAATGTGGGTGGCGGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: TLIGNEAGIVQADQIIQAKPQLE*NVGGGS Trigger: GCTGCCGCCACCCACATTCCACTCTAGTTGGGGCTT...GGCCTGTATAATCTGGTCAGCTTGGACAATTCCTGCCTCATTTCCTATTAATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
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| 3UTR-3UTR GCA 90 bp | CTCTGGGCACATATAGTATGTTTATATAGGCTAAACTCAGAAACAAGGCAATTAGGGTGGCGGCAGCCCTaGTCCCTGCTTCATCCCAGT | + |
|
Preference number: 2 (lower is better) Translates to: LWAHIVCLYRLNSETRQLGWRQP*SLLHPS Trigger: ACTGGGATGAAGCAGGGAGCAGGGCTGCCGCCACCC...TAATTGCCTTGTTTCTGAGTTTAGCCTATATAAACATACTATATGTGCCCAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| 3UTR-3UTR CCA 90 bp | TTAATAGGAAATGAGGCAGGAATTGTCCAAGCTGACCAGATTATACAGGCCAATAAGCCCCAACTAGAGTaGAATGTGGGTGGCGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: LIGNEAGIVQADQIIQANKPQLE*NVGGGS Trigger: GCTGCCGCCACCCACATTCCACTCTAGTTGGGGCTT...ATTGGCCTGTATAATCTGGTCAGCTTGGACAATTCCTGCCTCATTTCCTATTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
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| 3UTR-3UTR GCA 90 bp | GCTATCGTCTCTAAACTTGCCACCTTCCAGGATAGTGGGCACAATCTAGCCTATGTCTGCAGGAATGTGTaGTTCTACCCAAAACCAAGA | + |
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Preference number: 2 (lower is better) Translates to: AIVSKLATFQDSGHNLAYVCRNV*FYPKPR Trigger: TCTTGGTTTTGGGTAGAAGCACACATTCCTGCAGAC...ATAGGCTAGATTGTGCCCACTATCCTGGAAGGTGGCAAGTTTAGAGACGATAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| 3UTR-3UTR GCA 90 bp | GCTATCGTCTCTAAACTTGCCACCTTCCAGGATAGTGGGCACAATCTAGCCTATACCACTGCTTCTTCTTaGCTAACTTGGAGGAAACCA | + |
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Preference number: 2 (lower is better) Translates to: AIVSKLATFQDSGHNLAYTTASS*LTWRKP Trigger: TGGTTTCCTCCAAGTTAGGCAAGAAGAAGCAGTGGT...ATAGGCTAGATTGTGCCCACTATCCTGGAAGGTGGCAAGTTTAGAGACGATAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGCTGACCTCATCTCCATCTCCTGTCCTATCCCATCAGTTCCTGCTCTACTCGTGACTGTAGACCTCTaGGCACATATAGTATGTTTA | + |
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Preference number: 2 (lower is better) Translates to: SADLISISCPIPSVPALLVTVDL*AHIVCL Trigger: TAAACATACTATATGTGCCCAGAGGTCTACAGTCAC...GAGTAGAGCAGGAACTGATGGGATAGGACAGGAGATGGAGATGAGGTCAGCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
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| 3UTR-3UTR GCA 90 bp | GCTATCGTCTCTAAACTTGCCACCTTCCAGGATAGTGGGCACAATCTAGCCTATCTTCATCCCAGTGAGTaGTGTCTTCTTAAATTGTCG | + |
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Preference number: 2 (lower is better) Translates to: AIVSKLATFQDSGHNLAYLHPSE*CLLKLS Trigger: CGACAATTTAAGAAGACAGCACTCACTGGGATGAAG...ATAGGCTAGATTGTGCCCACTATCCTGGAAGGTGGCAAGTTTAGAGACGATAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
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| 3UTR CAA 90 bp | TTTATTAGTGGGGAGACTAGGATTAAGTCAAGCTCCCTCCATCGTTaGGGGATTATATTGCTGCCTATGAGTGTCAGAAAGCAGCAGTTG | + |
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Preference number: 2 (lower is better) Translates to: FISGETRIKSSSLHR*GIILLPMSVRKQQL Trigger: CAACTGCTGCTTTCTGACACTCATAGGCAGCAATATAATCCCCAAACGATGGAGGGAGCTTGACTTAATCCTAGTCTCCCCACTAATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
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| 3UTR CAA 90 bp | CGGGAACAAAGTCACTTTATGGACCACTGCTTCTTCTTGCCTAACTaGGAGGAAACCACTCTCTCACGTAGTTACAAACATTGCCTAGTA | + |
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Preference number: 2 (lower is better) Translates to: REQSHFMDHCFFLPN*EETTLSRSYKHCLV Trigger: TACTAGGCAATGTTTGTAACTACGTGAGAGAGTGGTTTCCTCCAAGTTAGGCAAGAAGAAGCAGTGGTCCATAAAGTGACTTTGTTCCCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
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| 3UTR-3UTR GCA 90 bp | TTAGTGTTAGTCATGAAAGCCATAAATCTGAGTACCTTTACTGCAGGCTTTAAAGCCCTCGCTGTCCCTTaGCTGCAGAAACAGAGTCCA | + |
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Preference number: 2 (lower is better) Translates to: LVLVMKAINLSTFTAGFKALAVP*LQKQSP Trigger: TGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGC...TTTAAAGCCTGCAGTAAAGGTACTCAGATTTATGGCTTTCATGACTAACACTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| 3UTR-3UTR GCA 90 bp | CTCTGGGCACATATAGTATGTTTATATAGGCTAAACTCAGAAACAAGGCAATTAGCCCTCGCTGTCCCTTaGCTGCAGAAACAGAGTCCA | + |
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Preference number: 2 (lower is better) Translates to: LWAHIVCLYRLNSETRQLALAVP*LQKQSP Trigger: TGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGC...TAATTGCCTTGTTTCTGAGTTTAGCCTATATAAACATACTATATGTGCCCAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
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| 3UTR-3UTR GCA 90 bp | CATAATCAAAACGTCTTAACCAGAACACCAACAAGTATCAAAGCATTTGGTAAGGCCCTCGCTGTCCCTTaGCTGCAGAAACAGAGTCCA | + |
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Preference number: 2 (lower is better) Translates to: HNQNVLTRTPTSIKAFGKALAVP*LQKQSP Trigger: TGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGC...CTTACCAAATGCTTTGATACTTGTTGGTGTTCTGGTTAAGACGTTTTGATTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
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| 3UTR-3UTR GCA 90 bp | GTCATGAAAGCCATAAATCTGAGTACCTTTACTGCAGGCTTTAAACTAGACAGTCCCCATCACAGTGCATaGCCCAGTGCTATGTTCATG | + |
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Preference number: 2 (lower is better) Translates to: VMKAINLSTFTAGFKLDSPHHSA*PSAMFM Trigger: CATGAACATAGCACTGGGGCATGCACTGTGATGGGG...ACTGTCTAGTTTAAAGCCTGCAGTAAAGGTACTCAGATTTATGGCTTTCATGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| 3UTR CAA 90 bp | CTAAAGGATCGGGAACAAAGTCACTTTATGGACCACTGCTTCTTCTaGCCTAACTTGGAGGAAACCACTCTCTCACGTAGTTACAAACAT | + |
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Preference number: 2 (lower is better) Translates to: LKDREQSHFMDHCFF*PNLEETTLSRSYKH Trigger: ATGTTTGTAACTACGTGAGAGAGTGGTTTCCTCCAAGTTAGGCAAGAAGAAGCAGTGGTCCATAAAGTGACTTTGTTCCCGATCCTTTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
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| 3UTR CAA 90 bp | CTGCTTCATCCCAGTGAGTGCTGTCTTCTTAAATTGTCGCAACATTaGGCCGCTTTCTTTGGGTTTTTCCTGCATATGCTCCTAAAAATA | + |
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Preference number: 2 (lower is better) Translates to: LLHPSECCLLKLSQH*AAFFGFFLHMLLKI Trigger: TATTTTTAGGAGCATATGCAGGAAAAACCCAAAGAAAGCGGCCAAATGTTGCGACAATTTAAGAAGACAGCACTCACTGGGATGAAGCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
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| 3UTR-3UTR GCA 90 bp | TCTATAAAACAACTAGCTGTCTGCAGGAATGTGTGCTTCTACCCAAAACCAAGAACTTGCATGAAGGTCTaGACTTCAGAGAAAACAAGC | + |
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Preference number: 2 (lower is better) Translates to: SIKQLAVCRNVCFYPKPRTCMKV*TSEKTS Trigger: GCTTGTTTTCTCTGAAGTGCAGACCTTCATGCAAGT...TCTTGGTTTTGGGTAGAAGCACACATTCCTGCAGACAGCTAGTTGTTTTATAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
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| 3UTR CAA 90 bp | CCTGCTTATAATGTGAATTACTCAGTGCAAAGAGCACTTGCCTCCTaGCTTATAGACTCACAAGTGACAAATCATGAGATGAAATGCATG | + |
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Preference number: 2 (lower is better) Translates to: PAYNVNYSVQRALAS*LIDSQVTNHEMKCM Trigger: CATGCATTTCATCTCATGATTTGTCACTTGTGAGTCTATAAGCAAGGAGGCAAGTGCTCTTTGCACTGAGTAATTCACATTATAAGCAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
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| 3UTR-3UTR TCA 90 bp | TCTATAAAACAACTAGCTGTCTGCAGGAATGTGTGCTTCTACCCAAAACCAAGATACGATGGTATGAAATaGGAAGTAAAAGCATGCCCA | + |
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Preference number: 2 (lower is better) Translates to: SIKQLAVCRNVCFYPKPRYDGMK*EVKACP Trigger: TGGGCATGCTTTTACTTCTCATTTCATACCATCGTA...TCTTGGTTTTGGGTAGAAGCACACATTCCTGCAGACAGCTAGTTGTTTTATAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
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| 3UTR-3UTR GCA 90 bp | GTTCAAATCTACACAATCCCAATGTTACATGAGAAGCACAAAGCCCTTTTTGGAAAACAACTAGCTGTCTaGAGGAATGTGTGCTTCTAC | + |
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Preference number: 2 (lower is better) Translates to: VQIYTIPMLHEKHKALFGKQLAV*RNVCFY Trigger: GTAGAAGCACACATTCCTGCAGACAGCTAGTTGTTT...TCCAAAAAGGGCTTTGTGCTTCTCATGTAACATTGGGATTGTGTAGATTTGAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| 3UTR-3UTR TCA 90 bp | GTTCAAATCTACACAATCCCAATGTTACATGAGAAGCACAAAGCCCTTTTTGGAAACATTAATAGGAAATaGGGCAGGAATTGTCCAAGC | + |
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Preference number: 2 (lower is better) Translates to: VQIYTIPMLHEKHKALFGNINRK*GRNCPS Trigger: GCTTGGACAATTCCTGCCTCATTTCCTATTAATGTT...TCCAAAAAGGGCTTTGTGCTTCTCATGTAACATTGGGATTGTGTAGATTTGAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| 3UTR TCA 72 bp | GATGGCAAGGAAGACTGTGTGTCCCACTGTGACGCCTaGGTCAGGGCAGACTGTGCTCGCCCCTTGGTGAAC | + |
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Preference number: 3 (lower is better) Translates to: DGKEDCVSHCDA*VRADCARPLVN Trigger: GTTCACCAAGGGGCGAGCACAGTCTGCCCTGACTCAGGCGTCACAGTGGGACACACAGTCTTCCTTGCCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
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| 3UTR GCA 72 bp | GCCCCAACTAGAGTGGAATGTGGGTGGCGGCAGCCCTaGTCCCTGCTTCATCCCAGTGAGTGCTGTCTTCTT | + |
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Preference number: 3 (lower is better) Translates to: APTRVECGWRQP*SLLHPSECCLL Trigger: AAGAAGACAGCACTCACTGGGATGAAGCAGGGAGCAGGGCTGCCGCCACCCACATTCCACTCTAGTTGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
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| 3UTR CCA 72 bp | GCTAAGTCACAAGCCCCAACTAGAGTGGAATGTGGGTaGCGGCAGCCCTGCTCCCTGCTTCATCCCAGTGAG | + |
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Preference number: 3 (lower is better) Translates to: AKSQAPTRVECG*RQPCSLLHPSE Trigger: CTCACTGGGATGAAGCAGGGAGCAGGGCTGCCGCCACCCACATTCCACTCTAGTTGGGGCTTGTGACTTAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| 3UTR GCA 72 bp | TGGCGGCAGCCCTGCTCCCTGCTTCATCCCAGTGAGTaGTGTCTTCTTAAATTGTCGCAACATTTGGCCGCT | + |
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Preference number: 3 (lower is better) Translates to: WRQPCSLLHPSE*CLLKLSQHLAA Trigger: AGCGGCCAAATGTTGCGACAATTTAAGAAGACAGCACTCACTGGGATGAAGCAGGGAGCAGGGCTGCCGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
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| 3UTR GCA 72 bp | GATTATACAGGCCAATGCTCAGCCCTCGCTGTCCCTTaGCTGCAGAAACAGAGTCCAGGGCTAAGTCACAAG | + |
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Preference number: 3 (lower is better) Translates to: DYTGQCSALAVP*LQKQSPGLSHK Trigger: CTTGTGACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCATTGGCCTGTATAATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
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| 3UTR GCA 72 bp | CTAGCCGCATGCGCTCCACTGCCCCATCACAGTGCATaGCCCAGTGCTATGTTCATGAAAATTGTGCTATCG | + |
|
Preference number: 3 (lower is better) Translates to: LAACAPLPHHSA*PSAMFMKIVLS Trigger: CGATAGCACAATTTTCATGAACATAGCACTGGGGCATGCACTGTGATGGGGCAGTGGAGCGCATGCGGCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| 3UTR GCA 72 bp | CTAGAGTGGAATGTGGGTGGCGGCAGCCCTGCTCCCTaGTTCATCCCAGTGAGTGCTGTCTTCTTAAATTGT | + |
|
Preference number: 3 (lower is better) Translates to: LEWNVGGGSPAP*FIPVSAVFLNC Trigger: ACAATTTAAGAAGACAGCACTCACTGGGATGAAGCAGGGAGCAGGGCTGCCGCCACCCACATTCCACTCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
||
| 3UTR TCA 72 bp | GCATCAACTACTGAGAGCATAAGCTTTGAGAAGAACTaGAATCCCGCACACGCACCCAGCCATCAGGAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: ASTTESISFEKN*NPAHAPSHQES Trigger: GCTCTCCTGATGGCTGGGTGCGTGTGCGGGATTTCAGTTCTTCTCAAAGCTTATGCTCTCAGTAGTTGATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
||
| 3UTR CCA 72 bp | ATCTCCTGTCCTATCCCATCAGTTCCTGCTCTACTCTaGTCCGTGGTTTTTGGACCTGCTGAATGTCTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: ISCPIPSVPALL*SVVFGPAECLL Trigger: GAGCAGACATTCAGCAGGTCCAAAAACCACGGACCAGAGTAGAGCAGGAACTGATGGGATAGGACAGGAGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
||
| 3UTR TCA 72 bp | AGCAACCGAAGCCTGCAACACTCACAGGAGAAGAGCTaGAAACACCCTAACACGCCCATAATGTCACAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: SNRSLQHSQEKS*KHPNTPIMSQA Trigger: TGCTTGTGACATTATGGGCGTGTTAGGGTGTTTTCAGCTCTTCTCCTGTGAGTGTTGCAGGCTTCGGTTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
||
| 3UTR CCA 72 bp | CCATGGAAAGTGGTCACTGAGGCAAACCGATGCTACTaGGCAGAACAGTACTTACGCCATAATGATCGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: PWKVVTEANRCY*AEQYLRHNDRP Trigger: TGGACGATCATTATGGCGTAAGTACTGTTCTGCCCAGTAGCATCGGTTTGCCTCAGTGACCACTTTCCATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTCAAATCTACACAATCCCAATGTTACATGAGAAGCACAAAGCCCTTTTTGGAGACTGTGCTCGCCCCTaGGTGAACGGGCTCCAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: VQIYTIPMLHEKHKALFGDCARP*VNGLQE Trigger: TTCCTGGAGCCCGTTCACCAAGGGGCGAGCACAGTC...TCCAAAAAGGGCTTTGTGCTTCTCATGTAACATTGGGATTGTGTAGATTTGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
||
| 3UTR CCA 72 bp | CATGAGATGAAATGCATGAGGAAAGACCATGGAAAGTaGTCACTGAGGCAAACCGATGCTACTGGGCAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: HEMKCMRKDHGK*SLRQTDATGQN Trigger: GTTCTGCCCAGTAGCATCGGTTTGCCTCAGTGACCACTTTCCATGGTCTTTCCTCATGCATTTCATCTCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
||
| 3UTR CCA 72 bp | GTCCTATCCCATCAGTTCCTGCTCTACTCTGGTCCGTaGTTTTTGGACCTGCTGAATGTCTGCTCTAACATA | + |
|
Preference number: 3 (lower is better) Translates to: VLSHQFLLYSGP*FLDLLNVCSNI Trigger: TATGTTAGAGCAGACATTCAGCAGGTCCAAAAACCACGGACCAGAGTAGAGCAGGAACTGATGGGATAGGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
||
| 3UTR-3UTR CAA 90 bp | GACCTCTGGGCACATATAGTATGTTTATATAGGCTAAACTCAGAAACAAGGCAAAGCCCTCGCTGTCCCTaGCCTGCAGAAACAGAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: DLWAHIVCLYRLNSETRQSPRCP*PAETES Trigger: GGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCT...TTGCCTTGTTTCTGAGTTTAGCCTATATAAACATACTATATGTGCCCAGAGGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
||
| 3UTR TCA 72 bp | ACAGAGCTGCTTGATTGGTCTGACTTCTTACAAAGCTaGCGGTCTCTAAAGCAAGCAGTCTCCGACTCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: TELLDWSDFLQS*RSLKQAVSDSQ Trigger: TTGAGAGTCGGAGACTGCTTGCTTTAGAGACCGTCAGCTTTGTAAGAAGTCAGACCAATCAAGCAGCTCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
||
| 3UTR GCA 72 bp | GAAAGACCATGGAAAGTGGTCACTGAGGCAAACCGATaGTACTGGGCAGAACAGTACTTACGCCATAATGAT | + |
|
Preference number: 3 (lower is better) Translates to: ERPWKVVTEANR*YWAEQYLRHND Trigger: ATCATTATGGCGTAAGTACTGTTCTGCCCAGTAGCATCGGTTTGCCTCAGTGACCACTTTCCATGGTCTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
||
| 3UTR GCA 72 bp | CTAAAGGATCGGGAACAAAGTCACTTTATGGACCACTaGTTCTTCTTGCCTAACTTGGAGGAAACCACTCTC | + |
|
Preference number: 3 (lower is better) Translates to: LKDREQSHFMDH*FFLPNLEETTL Trigger: GAGAGTGGTTTCCTCCAAGTTAGGCAAGAAGAAGCAGTGGTCCATAAAGTGACTTTGTTCCCGATCCTTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
||
| 3UTR CCA 72 bp | CCAGTGAGTGCTGTCTTCTTAAATTGTCGCAACATTTaGCCGCTTTCTTTGGGTTTTTCCTGCATATGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: PVSAVFLNCRNI*PLSLGFSCICS Trigger: GGAGCATATGCAGGAAAAACCCAAAGAAAGCGGCCAAATGTTGCGACAATTTAAGAAGACAGCACTCACTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
||
| 3UTR CCA 72 bp | GTCATTAAGACAGGTAGCCTAACTCATAGGATGTCCTaGCCTCCACAAAACACTAAAACAATGGTCACCAAC | + |
|
Preference number: 3 (lower is better) Translates to: VIKTGSLTHRMS*PPQNTKTMVTN Trigger: GTTGGTGACCATTGTTTTAGTGTTTTGTGGAGGCCAGGACATCCTATGAGTTAGGCTACCTGTCTTAATGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTATCGTCTCTAAACTTGCCACCTTCCAGGATAGTGGGCACAATCTAGCCTATAGCACAAAGCCCTTTTaGGAATTATATGGTGACATT | + |
|
Preference number: 3 (lower is better) Translates to: AIVSKLATFQDSGHNLAYSTKPF*ELYGDI Trigger: AATGTCACCATATAATTCCAAAAAGGGCTTTGTGCT...ATAGGCTAGATTGTGCCCACTATCCTGGAAGGTGGCAAGTTTAGAGACGATAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| 3UTR TCA 72 bp | TTGCTGTCAGCGTGTCCCTCTTGGAATCTATGTGAATaGCGAGTAATAACACAAAAGACTAAAGGATCGGGA | + |
|
Preference number: 3 (lower is better) Translates to: LLSACPSWNLCE*RVITQKTKGSG Trigger: TCCCGATCCTTTAGTCTTTTGTGTTATTACTCGTCATTCACATAGATTCCAAGAGGGACACGCTGACAGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
||
| 3UTR TCA 72 bp | TGCCTCCTTGCTTATAGACTCACAAGTGACAAATCATaGGATGAAATGCATGAGGAAAGACCATGGAAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: CLLAYRLTSDKS*DEMHEERPWKV Trigger: CACTTTCCATGGTCTTTCCTCATGCATTTCATCTCATGATTTGTCACTTGTGAGTCTATAAGCAAGGAGGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
||
| 3UTR TCA 72 bp | TACATTACTAACTGTGGCGATTTCCTGCTTATAATGTaGATTACTCAGTGCAAAGAGCACTTGCCTCCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: YITNCGDFLLIM*ITQCKEHLPPC Trigger: GCAAGGAGGCAAGTGCTCTTTGCACTGAGTAATTCACATTATAAGCAGGAAATCGCCACAGTTAGTAATGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
||
| 3UTR GCA 72 bp | GTCTATAAAGCAAAAGGTCTACAACGATCTCACATTTaGTGTCAGCGTGTCCCTCTTGGAATCTATGTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: VYKAKGLQRSHI*CQRVPLGIYVN Trigger: ATTCACATAGATTCCAAGAGGGACACGCTGACAGCAAATGTGAGATCGTTGTAGACCTTTTGCTTTATAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
||
| 3UTR-3UTR CAA 90 bp | GACCTCTGGGCACATATAGTATGTTTATATAGGCTAAACTCAGAAACAAGGCAAGAAATGAGGCAGGAATaGTCCAAGCTGACCAGATTA | + |
|
Preference number: 3 (lower is better) Translates to: DLWAHIVCLYRLNSETRQEMRQE*SKLTRL Trigger: TAATCTGGTCAGCTTGGACAATTCCTGCCTCATTTC...TTGCCTTGTTTCTGAGTTTAGCCTATATAAACATACTATATGTGCCCAGAGGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
||
| 3UTR GCA 72 bp | ATGAAACCTAACATTTCTATAAAACAACTAGCTGTCTaGAGGAATGTGTGCTTCTACCCAAAACCAAGACCC | + |
|
Preference number: 3 (lower is better) Translates to: MKPNISIKQLAV*RNVCFYPKPRP Trigger: GGGTCTTGGTTTTGGGTAGAAGCACACATTCCTGCAGACAGCTAGTTGTTTTATAGAAATGTTAGGTTTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| 3UTR CCA 72 bp | GCTTATACCCAGAGTGGGTCATCATTTTGTAACTTCTaGCTGGGTATAAAAGTCAAACTTCAGATGGAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: AYTQSGSSFCNF*LGIKVKLQMEE Trigger: TTCTTCCATCTGAAGTTTGACTTTTATACCCAGCCAGAAGTTACAAAATGATGACCCACTCTGGGTATAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| 3UTR CCA 72 bp | ATAGGATGTCCTGGCCTCCACAAAACACTAAAACAATaGTCACCAACAGGAATATCCATGAATATATCAACA | + |
|
Preference number: 3 (lower is better) Translates to: IGCPGLHKTLKQ*SPTGISMNIST Trigger: TGTTGATATATTCATGGATATTCCTGTTGGTGACCATTGTTTTAGTGTTTTGTGGAGGCCAGGACATCCTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
||
| CDS-3UTR TCA 90 bp | CCAATGCTCAGCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGAGAACCAGACACCTCTaGGTCTCCAGGCAGCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PMLSPRCPLPAETESRAKRTRHL*VSRQPH Trigger: GTGGGGCTGCCTGGAGACTCAGAGGTGTCTGGTTCT...CTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCATTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 |
||
| CDS-3UTR CCA 90 bp | TGCTCAGCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTCACCACAGTGCCTGCCTATaGGCATGGGTGGGGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CSALAVPCLQKQSPGLSHHSACL*AWVGPS Trigger: AGAAGGCCCCACCCATGCCCATAGGCAGGCACTGTG...GTGACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR TCA 90 bp | TGCTCAGCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTCACAAAGCCTGCTGCCTCTaGCTTGGCTTACCCACGACC | + |
|
Preference number: 4 (lower is better) Translates to: CSALAVPCLQKQSPGLSHKACCL*LGLPTT Trigger: GGTCGTGGGTAAGCCAAGTCAGAGGCAGCAGGCTTT...GTGACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR TCA 90 bp | CCAATGCTCAGCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGAAAGCCTGCTGCCTCTaGCTTGGCTTACCCACGACC | + |
|
Preference number: 4 (lower is better) Translates to: PMLSPRCPLPAETESRAKKACCL*LGLPTT Trigger: GGTCGTGGGTAAGCCAAGTCAGAGGCAGCAGGCTTT...CTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCATTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR TCA 90 bp | TCCAGGGCTAAGTCACAAGCCCCAACTAGAGTGGAATGTGGGTGGCGGCAGCCCCTCAGCTATGAGGAGTaGCAACTGCTGGGCATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SRAKSQAPTRVECGWRQPLSYEE*QLLGML Trigger: CAGCATGCCCAGCAGTTGTCACTCCTCATAGCTGAG...GGGCTGCCGCCACCCACATTCCACTCTAGTTGGGGCTTGTGACTTAGCCCTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR TCA 90 bp | CCAACTAGAGTGGAATGTGGGTGGCGGCAGCCCTGCTCCCTGCTTCATCCCAGTCTTCTGTGTTGCCACTaGAAGCGCCACTCGTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: PTRVECGWRQPCSLLHPSLLCCH*KRHSWT Trigger: AGTCCACGAGTGGCGCTTTCAGTGGCAACACAGAAG...ACTGGGATGAAGCAGGGAGCAGGGCTGCCGCCACCCACATTCCACTCTAGTTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR GCA 90 bp | TCCAGGGCTAAGTCACAAGCCCCAACTAGAGTGGAATGTGGGTGGCGGCAGCCCCTGCCGTGCCCATGCTaGTTGCTTGTGAAGCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: SRAKSQAPTRVECGWRQPLPCPC*LLVKHL Trigger: AAGGTGCTTCACAAGCAAGCAGCATGGGCACGGCAG...GGGCTGCCGCCACCCACATTCCACTCTAGTTGGGGCTTGTGACTTAGCCCTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR GCA 90 bp | CCAACTAGAGTGGAATGTGGGTGGCGGCAGCCCTGCTCCCTGCTTCATCCCAGTGGCGGTGTGTCCATCTaGTGTCTGGAAGTCTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PTRVECGWRQPCSLLHPSGGVSI*CLEVWV Trigger: AACCCAGACTTCCAGACAGCAGATGGACACACCGCC...ACTGGGATGAAGCAGGGAGCAGGGCTGCCGCCACCCACATTCCACTCTAGTTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CCA 90 bp | TGCTCAGCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTCACGCCTGCCTATGGGCATaGGTGGGGCCTTCTCCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: CSALAVPCLQKQSPGLSHACLWA*VGPSPL Trigger: TAAAGGAGAAGGCCCCACCCATGCCCATAGGCAGGC...GTGACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CCA 90 bp | CCAACTAGAGTGGAATGTGGGTGGCGGCAGCCCTGCTCCCTGCTTCATCCCAGTTTGGTTTGTCAGGGATaGCAGAGCCACAGTGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PTRVECGWRQPCSLLHPSLVCQG*QSHSAC Trigger: GCAGGCACTGTGGCTCTGCCATCCCTGACAAACCAA...ACTGGGATGAAGCAGGGAGCAGGGCTGCCGCCACCCACATTCCACTCTAGTTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CCA 90 bp | TGCTCAGCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTCACCTCTGGTCACGCCACTaGTCAGTGATCCCCAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: CSALAVPCLQKQSPGLSHLWSRH*SVIPRG Trigger: ACCTCTGGGGATCACTGACCAGTGGCGTGACCAGAG...GTGACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR TCA 90 bp | AGTCCAGGGCTAAGTCACAAGCCCCAACTAGAGTGGAATGTGGGTGGCGGCAGCCTCAGCTATGAGGAGTaGCAACTGCTGGGCATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SPGLSHKPQLEWNVGGGSLSYEE*QLLGML Trigger: CAGCATGCCCAGCAGTTGTCACTCCTCATAGCTGAG...GCTGCCGCCACCCACATTCCACTCTAGTTGGGGCTTGTGACTTAGCCCTGGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR TCA 90 bp | TGCTCAGCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTCACTCTCCTGCTCAGCTATaGGGAGTGACAACTGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: CSALAVPCLQKQSPGLSHSPAQL*GVTTAG Trigger: CCCAGCAGTTGTCACTCCTCATAGCTGAGCAGGAGA...GTGACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR TCA 90 bp | AGTCCAGGGCTAAGTCACAAGCCCCAACTAGAGTGGAATGTGGGTGGCGGCAGCGGAAGCATCTTGGGCTaGGACGACACCTCTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SPGLSHKPQLEWNVGGGSGSILG*DDTSLQ Trigger: CTGAAGAGAGGTGTCGTCTCAGCCCAAGATGCTTCC...GCTGCCGCCACCCACATTCCACTCTAGTTGGGGCTTGTGACTTAGCCCTGGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
||
| CDS-3UTR GCA 90 bp | CCAACTAGAGTGGAATGTGGGTGGCGGCAGCCCTGCTCCCTGCTTCATCCCAGTGCTCCATCTTCTGCCTaGCTGCTTTCTGGACTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PTRVECGWRQPCSLLHPSAPSSA*LLSGLS Trigger: TGAGAGTCCAGAAAGCAGGCAGGCAGAAGATGGAGC...ACTGGGATGAAGCAGGGAGCAGGGCTGCCGCCACCCACATTCCACTCTAGTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR GCA 90 bp | TCCAGGGCTAAGTCACAAGCCCCAACTAGAGTGGAATGTGGGTGGCGGCAGCCCAGCAGCTCCATCTTCTaGCTGCCTGCTTTCTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: SRAKSQAPTRVECGWRQPSSSIF*LPAFWT Trigger: AGTCCAGAAAGCAGGCAGGCAGAAGATGGAGCTGCT...GGGCTGCCGCCACCCACATTCCACTCTAGTTGGGGCTTGTGACTTAGCCCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CCA 90 bp | CAATGCTCAGCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTGCCTGCCTATGGGCATaGGTGGGGCCTTCTCCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: QCSALAVPCLQKQSPGLSACLWA*VGPSPL Trigger: TAAAGGAGAAGGCCCCACCCATGCCCATAGGCAGGC...ACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR TCA 90 bp | GCAGGAATTGTCCAAGCTGACCAGATTATACAGGCCAATGCTCAGCCCTCGCTGAGAACCAGACACCTCTaGGTCTCCAGGCAGCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: AGIVQADQIIQANAQPSLRTRHL*VSRQPH Trigger: GTGGGGCTGCCTGGAGACTCAGAGGTGTCTGGTTCT...CAGCGAGGGCTGAGCATTGGCCTGTATAATCTGGTCAGCTTGGACAATTCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 |
||
| CDS-3UTR TCA 90 bp | GCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTCACAAGCCCTTCCAAGGTTTGACTTaGCACACACTGACTGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ALAVPCLQKQSPGLSHKPFQGLT*HTLTAG Trigger: CCCAGCAGTCAGTGTGTGTCAAGTCAAACCTTGGAA...GGGCTTGTGACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR TCA 90 bp | CAATGCTCAGCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTCTCAGCTATGAGGAGTaGCAACTGCTGGGCATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QCSALAVPCLQKQSPGLSLSYEE*QLLGML Trigger: CAGCATGCCCAGCAGTTGTCACTCCTCATAGCTGAG...ACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCATTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR GCA 90 bp | CCAACTAGAGTGGAATGTGGGTGGCGGCAGCCCTGCTCCCTGCTTCATCCCAGTAGCGGTTCTATCCACTaGCTCTTCTTTCCCCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PTRVECGWRQPCSLLHPSSGSIH*LFFPLW Trigger: CCAAAGGGGAAAGAAGAGGCAGTGGATAGAACCGCT...ACTGGGATGAAGCAGGGAGCAGGGCTGCCGCCACCCACATTCCACTCTAGTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR GCA 90 bp | TCCAGGGCTAAGTCACAAGCCCCAACTAGAGTGGAATGTGGGTGGCGGCAGCCCCTGGAAGTCTGGGTTTaGGTAAGTAAGGGAGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: SRAKSQAPTRVECGWRQPLEVWV*VSKGDG Trigger: CCCATCTCCCTTACTTACGCAAACCCAGACTTCCAG...GGGCTGCCGCCACCCACATTCCACTCTAGTTGGGGCTTGTGACTTAGCCCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR GCA 90 bp | ATGCTCAGCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTCAGGCGGTGTGTCCATCTaGTGTCTGGAAGTCTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: MLSPRCPLPAETESRAKSGGVSI*CLEVWV Trigger: AACCCAGACTTCCAGACAGCAGATGGACACACCGCC...TGACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR GCA 90 bp | CCAACTAGAGTGGAATGTGGGTGGCGGCAGCCCTGCTCCCTGCTTCATCCCAGTATTTCCTTTTGCAGTTaGTCCTGCTCCCTCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PTRVECGWRQPCSLLHPSISFCS*SCSLSC Trigger: GCAGGAGAGGGAGCAGGAGCAACTGCAAAAGGAAAT...ACTGGGATGAAGCAGGGAGCAGGGCTGCCGCCACCCACATTCCACTCTAGTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR GCA 90 bp | TCCAGGGCTAAGTCACAAGCCCCAACTAGAGTGGAATGTGGGTGGCGGCAGCCCATTTCCTTTTGCAGTTaGTCCTGCTCCCTCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SRAKSQAPTRVECGWRQPISFCS*SCSLSC Trigger: GCAGGAGAGGGAGCAGGAGCAACTGCAAAAGGAAAT...GGGCTGCCGCCACCCACATTCCACTCTAGTTGGGGCTTGTGACTTAGCCCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CCA 90 bp | CAATGCTCAGCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTTGCCTGCCTGCTTTCTaGACTCTCACACTGCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QCSALAVPCLQKQSPGLSCLPAF*TLTLPQ Trigger: CTGAGGCAGTGTGAGAGTCCAGAAAGCAGGCAGGCA...ACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCATTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR TCA 90 bp | CCAATGCTCAGCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGATGGAAACGGATGAGTaGGACACTTTCTGCCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PMLSPRCPLPAETESRAKMETDE*DTFCLS Trigger: GCTCAGGCAGAAAGTGTCTCACTCATCCGTTTCCAT...CTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCATTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 |
||
| CDS-3UTR TCA 90 bp | GCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTCACAAGCCCGTTGGCCTGCTTTCTTaGCTGCACATCAAGTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ALAVPCLQKQSPGLSHKPVGLLS*LHIKCF Trigger: AAAGCACTTGATGTGCAGTCAAGAAAGCAGGCCAAC...GGGCTTGTGACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 |
||
| CDS-3UTR TCA 90 bp | GCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTCACAAGCCCCTAAGACATCAGAAATaGTGGTCTCCTGTGGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ALAVPCLQKQSPGLSHKPLRHQK*WSPVGL Trigger: CAAGCCCACAGGAGACCATCATTTCTGATGTCTTAG...GGGCTTGTGACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR TCA 90 bp | GAAACAGAGTCCAGGGCTAAGTCACAAGCCCCAACTAGAGTGGAATGTGGGTGGAAAGCCTGCTGCCTCTaGCTTGGCTTACCCACGACC | + |
|
Preference number: 4 (lower is better) Translates to: ETESRAKSQAPTRVECGWKACCL*LGLPTT Trigger: GGTCGTGGGTAAGCCAAGTCAGAGGCAGCAGGCTTT...CCACCCACATTCCACTCTAGTTGGGGCTTGTGACTTAGCCCTGGACTCTGTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR TCA 90 bp | TGCTCAGCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTCACGCAGACTGGCTGACTTaGGTTCACACACATCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CSALAVPCLQKQSPGLSHADWLT*VHTHLP Trigger: TGGAAGATGTGTGTGAACTCAAGTCAGCCAGTCTGC...GTGACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR TCA 90 bp | GCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTCACAAGCCCGCAGGGCAGAAGTTATaGAGCCAGAGTTGTTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ALAVPCLQKQSPGLSHKPAGQKL*SQSCLK Trigger: CTTCAAACAACTCTGGCTTCATAACTTCTGCCCTGC...GGGCTTGTGACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR TCA 90 bp | CAATGCTCAGCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTCACAACCCCCTTCACTaGAGTCTTAGGGGTTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QCSALAVPCLQKQSPGLSHNPLH*SLRGSL Trigger: CAAGGAACCCCTAAGACTTCAGTGAAGGGGGTTGTG...ACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCATTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 |
||
| CDS-3UTR GCA 90 bp | GAACGGGCTCCAGGAATTCATCGCTACACACCTGACACAGGCGCTCTGTTAGGCAGCAGCTCCATCTTCTaGCTGCCTGCTTTCTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: ERAPGIHRYTPDTGALLGSSSIF*LPAFWT Trigger: AGTCCAGAAAGCAGGCAGGCAGAAGATGGAGCTGCT...GCCTAACAGAGCGCCTGTGTCAGGTGTGTAGCGATGAATTCCTGGAGCCCGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
||
| CDS-3UTR GCA 90 bp | CCAATGCTCAGCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGAGCGGTTCTATCCACTaGCTCTTCTTTCCCCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PMLSPRCPLPAETESRAKSGSIH*LFFPLW Trigger: CCAAAGGGGAAAGAAGAGGCAGTGGATAGAACCGCT...CTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCATTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR GCA 90 bp | GACTCCCTCCCACACACCTGCGTAGTCACTGTGGATTCTTCGGTCATGCGCAGTTTTTGCAGTTGCTCCTaGTCCCTCTCCTGCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: DSLPHTCVVTVDSSVMRSFCSCS*SLSCSA Trigger: AGCTGAGCAGGAGAGGGAGCAGGAGCAACTGCAAAA...ACTGCGCATGACCGAAGAATCCACAGTGACTACGCAGGTGTGTGGGAGGGAGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
||
| CDS-3UTR GCA 90 bp | TCCAGGGCTAAGTCACAAGCCCCAACTAGAGTGGAATGTGGGTGGCGGCAGCCCTTGTCTCCACTCCAGTaGACTGTTCAAGTCAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SRAKSQAPTRVECGWRQPLSPLQ*TVQVRD Trigger: GTCTCTGACTTGAACAGTGCACTGGAGTGGAGACAA...GGGCTGCCGCCACCCACATTCCACTCTAGTTGGGGCTTGTGACTTAGCCCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CCA 90 bp | AGTCCAGGGCTAAGTCACAAGCCCCAACTAGAGTGGAATGTGGGTGGCGGCAGCCTCTTCTTTCCCCTTTaGGCTCAGCTCACAGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: SPGLSHKPQLEWNVGGGSLFFPL*AQLTGI Trigger: AATGCCTGTGAGCTGAGCCCAAAGGGGAAAGAAGAG...GCTGCCGCCACCCACATTCCACTCTAGTTGGGGCTTGTGACTTAGCCCTGGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CCA 90 bp | GCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTCACAAGCCCGCAGTTCATGCAACTTaGGCACAGCCATACAAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: ALAVPCLQKQSPGLSHKPAVHAT*AQPYKY Trigger: GTACTTGTATGGCTGTGCCCAAGTTGCATGAACTGC...GGGCTTGTGACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CCA 90 bp | CCAACTAGAGTGGAATGTGGGTGGCGGCAGCCCTGCTCCCTGCTTCATCCCAGTGCAGTTCATGCAACTTaGGCACAGCCATACAAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: PTRVECGWRQPCSLLHPSAVHAT*AQPYKY Trigger: GTACTTGTATGGCTGTGCCCAAGTTGCATGAACTGC...ACTGGGATGAAGCAGGGAGCAGGGCTGCCGCCACCCACATTCCACTCTAGTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CCA 90 bp | TGCTCAGCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTCACTGGAGTGAGTCCACTTaGGACAGCATGGTTTCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: CSALAVPCLQKQSPGLSHWSEST*DSMVSS Trigger: GCTAGAAACCATGCTGTCCCAAGTGGACTCACTCCA...GTGACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGAATTGTCCAAGCTGACCAGATTATACAGGCCAATGCTCAGCCCTCGCTGCTCTGGTCACGCCACTaGTCAGTGATCCCCAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: AGIVQADQIIQANAQPSLLWSRH*SVIPRG Trigger: ACCTCTGGGGATCACTGACCAGTGGCGTGACCAGAG...CAGCGAGGGCTGAGCATTGGCCTGTATAATCTGGTCAGCTTGGACAATTCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR TCA 90 bp | ATGCTCAGCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTCAATGGAAACGGATGAGTaGGACACTTTCTGCCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: MLSPRCPLPAETESRAKSMETDE*DTFCLS Trigger: GCTCAGGCAGAAAGTGTCTCACTCATCCGTTTCCAT...TGACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 |
||
| CDS-3UTR TCA 90 bp | AGTCCAGGGCTAAGTCACAAGCCCCAACTAGAGTGGAATGTGGGTGGCGGCAGCCTAAGACATCAGAAATaGTGGTCTCCTGTGGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SPGLSHKPQLEWNVGGGSLRHQK*WSPVGL Trigger: CAAGCCCACAGGAGACCATCATTTCTGATGTCTTAG...GCTGCCGCCACCCACATTCCACTCTAGTTGGGGCTTGTGACTTAGCCCTGGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR TCA 90 bp | GCAGGAATTGTCCAAGCTGACCAGATTATACAGGCCAATGCTCAGCCCTCGCTGACAAGGCCTTGTTCCTaGGACTCTGGTCACGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: AGIVQADQIIQANAQPSLTRPCS*DSGHAT Trigger: AGTGGCGTGACCAGAGTCTCAGGAACAAGGCCTTGT...CAGCGAGGGCTGAGCATTGGCCTGTATAATCTGGTCAGCTTGGACAATTCCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR TCA 90 bp | GCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTCACAAGCCCCTTCAGAGGGGCTTCTaGCTGAAAACTTCGTATGAA | + |
|
Preference number: 4 (lower is better) Translates to: ALAVPCLQKQSPGLSHKPLQRGF*LKTSYE Trigger: TTCATACGAAGTTTTCAGTCAGAAGCCCCTCTGAAG...GGGCTTGTGACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
||
| CDS-3UTR TCA 90 bp | GCAGGAATTGTCCAAGCTGACCAGATTATACAGGCCAATGCTCAGCCCTCGCTGCTTCTGTGTTGCCACTaGAAGCGCCACTCGTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: AGIVQADQIIQANAQPSLLLCCH*KRHSWT Trigger: AGTCCACGAGTGGCGCTTTCAGTGGCAACACAGAAG...CAGCGAGGGCTGAGCATTGGCCTGTATAATCTGGTCAGCTTGGACAATTCCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
||
| CDS-3UTR TCA 90 bp | GAAACAGAGTCCAGGGCTAAGTCACAAGCCCCAACTAGAGTGGAATGTGGGTGGCTTCTGTGTTGCCACTaGAAGCGCCACTCGTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: ETESRAKSQAPTRVECGWLLCCH*KRHSWT Trigger: AGTCCACGAGTGGCGCTTTCAGTGGCAACACAGAAG...CCACCCACATTCCACTCTAGTTGGGGCTTGTGACTTAGCCCTGGACTCTGTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
||
| CDS-3UTR TCA 90 bp | TGCTCAGCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTCACTGTCCTTGGTTTGGCTaGAGGACTCTTGTTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: CSALAVPCLQKQSPGLSHCPWFG*RTLVSE Trigger: CTCAGAAACAAGAGTCCTTCAGCCAAACCAAGGACA...GTGACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
||
| CDS-3UTR TCA 90 bp | AGTCCAGGGCTAAGTCACAAGCCCCAACTAGAGTGGAATGTGGGTGGCGGCAGCCTACTAAGTAGCCTATaGACGGGTGCATTCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SPGLSHKPQLEWNVGGGSLLSSL*TGAFCP Trigger: AGGACAGAATGCACCCGTTCATAGGCTACTTAGTAG...GCTGCCGCCACCCACATTCCACTCTAGTTGGGGCTTGTGACTTAGCCCTGGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
||
| CDS-3UTR GCA 90 bp | CAATGCTCAGCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTATGAGGAGTGACAACTaGTGGGCATGCTGTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QCSALAVPCLQKQSPGLSMRSDN*WACCSS Trigger: AGAGGAACAGCATGCCCAGCAGTTGTCACTCCTCAT...ACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCATTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR GCA 90 bp | GAAACAGAGTCCAGGGCTAAGTCACAAGCCCCAACTAGAGTGGAATGTGGGTGGTCCTGCTCCCTCTCCTaGTCAGCTATGAGGAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: ETESRAKSQAPTRVECGWSCSLS*SAMRSD Trigger: GTCACTCCTCATAGCTGAGCAGGAGAGGGAGCAGGA...CCACCCACATTCCACTCTAGTTGGGGCTTGTGACTTAGCCCTGGACTCTGTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR GCA 90 bp | TCATCTCCATCTCCTGTCCTATCCCATCAGTTCCTGCTCTACTCTGGTCCGTGGCCAGAGGTAGAACGGTaGTTCACCTGCAGAGCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: SSPSPVLSHQFLLYSGPWPEVER*FTCRAE Trigger: TTCGGCTCTGCAGGTGAAGCACCGTTCTACCTCTGG...CCACGGACCAGAGTAGAGCAGGAACTGATGGGATAGGACAGGAGATGGAGATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
||
| CDS-3UTR CCA 90 bp | TCATCTCCATCTCCTGTCCTATCCCATCAGTTCCTGCTCTACTCTGGTCCGTGGTTGGTTTGTCAGGGATaGCAGAGCCACAGTGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSPSPVLSHQFLLYSGPWLVCQG*QSHSAC Trigger: GCAGGCACTGTGGCTCTGCCATCCCTGACAAACCAA...CCACGGACCAGAGTAGAGCAGGAACTGATGGGATAGGACAGGAGATGGAGATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
||
| CDS-3UTR CCA 90 bp | TGCTCAGCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTCACTGTGGACGAATCCCTTaGGGTATCTTCTTTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CSALAVPCLQKQSPGLSHCGRIP*GIFFPA Trigger: TGCTGGAAAGAAGATACCCCAAGGGATTCGTCCACA...GTGACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR TCA 90 bp | AGTCCAGGGCTAAGTCACAAGCCCCAACTAGAGTGGAATGTGGGTGGCGGCAGCCTTTTCAAGCTTTACTaGAGTACAGTGTTCGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SPGLSHKPQLEWNVGGGSLFKLY*STVFGG Trigger: CCCACCGAACACTGTACTTCAGTAAAGCTTGAAAAG...GCTGCCGCCACCCACATTCCACTCTAGTTGGGGCTTGTGACTTAGCCCTGGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 |
||
| CDS-3UTR TCA 90 bp | GAAACAGAGTCCAGGGCTAAGTCACAAGCCCCAACTAGAGTGGAATGTGGGTGGGCTAACACTCGTTCCTaGAGGGAAGCATCTTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ETESRAKSQAPTRVECGWANTRS*REASWA Trigger: AGCCCAAGATGCTTCCCTTCAGGAACGAGTGTTAGC...CCACCCACATTCCACTCTAGTTGGGGCTTGTGACTTAGCCCTGGACTCTGTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
||
| CDS-3UTR TCA 90 bp | CATCGCTACACACCTGACACAGGCGCTCTGTTAGGCACTCTGCTCTGTGAAGGCTCTCAGCAACTTTCATaGACTTCTTCCTGTCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: HRYTPDTGALLGTLLCEGSQQLS*TSSCPG Trigger: CCCTGGACAGGAAGAAGTTCATGAAAGTTGCTGAGA...GCCTTCACAGAGCAGAGTGCCTAACAGAGCGCCTGTGTCAGGTGTGTAGCGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
||
| CDS-3UTR TCA 90 bp | GAAACAGAGTCCAGGGCTAAGTCACAAGCCCCAACTAGAGTGGAATGTGGGTGGCACAACCCCCTTCACTaGAGTCTTAGGGGTTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ETESRAKSQAPTRVECGWHNPLH*SLRGSL Trigger: CAAGGAACCCCTAAGACTTCAGTGAAGGGGGTTGTG...CCACCCACATTCCACTCTAGTTGGGGCTTGTGACTTAGCCCTGGACTCTGTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 |
||
| CDS-3UTR GCA 90 bp | TGCTCAGCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTCACGGCTTCTGTCTATTTTaGACAACCCCCTTCACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: CSALAVPCLQKQSPGLSHGFCLF*TTPFTE Trigger: TTCAGTGAAGGGGGTTGTGCAAAATAGACAGAAGCC...GTGACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 |
||
| CDS-3UTR CCA 90 bp | GCTATCGTCTCTAAACTTGCCACCTTCCAGGATAGTGGGCACAATCTAGCCTATCACAGTGCCTGCCTATaGGCATGGGTGGGGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AIVSKLATFQDSGHNLAYHSACL*AWVGPS Trigger: AGAAGGCCCCACCCATGCCCATAGGCAGGCACTGTG...ATAGGCTAGATTGTGCCCACTATCCTGGAAGGTGGCAAGTTTAGAGACGATAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CCA 90 bp | GCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTCACAAGCCCGCTTGTGAAGCACCTTaGAGGAGAACATTTGACTTA | + |
|
Preference number: 4 (lower is better) Translates to: ALAVPCLQKQSPGLSHKPACEAP*RRTFDL Trigger: TAAGTCAAATGTTCTCCTCCAAGGTGCTTCACAAGC...GGGCTTGTGACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CCA 90 bp | CAATGCTCAGCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTTGTGGACGAATCCCTTaGGGTATCTTCTTTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QCSALAVPCLQKQSPGLSCGRIP*GIFFPA Trigger: TGCTGGAAAGAAGATACCCCAAGGGATTCGTCCACA...ACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| 3UTR CAA 72 bp | AGATTATACAGGCCAATGCTCAGCCCTCGCTGTCCCTaGCCTGCAGAAACAGAGTCCAGGGCTAAGTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: RLYRPMLSPRCP*PAETESRAKSQ Trigger: TTGTGACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCATTGGCCTGTATAATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
||
| CDS-3UTR TCA 90 bp | GAAACAGAGTCCAGGGCTAAGTCACAAGCCCCAACTAGAGTGGAATGTGGGTGGTTCCAAGGTTTGACTTaGCACACACTGACTGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ETESRAKSQAPTRVECGWFQGLT*HTLTAG Trigger: CCCAGCAGTCAGTGTGTGTCAAGTCAAACCTTGGAA...CCACCCACATTCCACTCTAGTTGGGGCTTGTGACTTAGCCCTGGACTCTGTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR TCA 90 bp | CAATGCTCAGCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTCTTCAGAGGGGCTTCTaGCTGAAAACTTCGTATGAA | + |
|
Preference number: 4 (lower is better) Translates to: QCSALAVPCLQKQSPGLSLQRGF*LKTSYE Trigger: TTCATACGAAGTTTTCAGTCAGAAGCCCCTCTGAAG...ACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
||
| CDS-3UTR TCA 90 bp | AGTCCAGGGCTAAGTCACAAGCCCCAACTAGAGTGGAATGTGGGTGGCGGCAGCAAGGACTCTTGTTTCTaGGGGGTTTTGTTTAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SPGLSHKPQLEWNVGGGSKDSCF*GVLFKQ Trigger: CTGCTTAAACAAAACCCCTCAGAAACAAGAGTCCTT...GCTGCCGCCACCCACATTCCACTCTAGTTGGGGCTTGTGACTTAGCCCTGGACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
||
| CDS-3UTR GCA 90 bp | CAATGCTCAGCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTTTCTTCCTGTTGGCCTaGTTTCTTGACTGCACATCA | + |
|
Preference number: 4 (lower is better) Translates to: QCSALAVPCLQKQSPGLSFFLLA*FLDCTS Trigger: TGATGTGCAGTCAAGAAAGCAGGCCAACAGGAAGAA...ACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCATTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 |
||
| CDS-3UTR GCA 90 bp | GCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTCACAAGCCCGTTCCATTTGTAAGTTaGAGGAGTTCTTTGCTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ALAVPCLQKQSPGLSHKPVPFVS*RSSLLA Trigger: TGCTAGCAAAGAACTCCTGCAACTTACAAATGGAAC...GGGCTTGTGACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR GCA 90 bp | GCTGCCACAGGCCGGACAGACCACATGAGGTATGCGATGACCATTTCTGATGACGACAACTGCTGGGCATaGTGTTCCTCTAGTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: AATGRTDHMRYAMTISDDDNCWA*CSSSLF Trigger: AAAGAGACTAGAGGAACAGCATGCCCAGCAGTTGTC...GTCATCAGAAATGGTCATCGCATACCTCATGTGGTCTGTCCGGCCTGTGGCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
||
| CDS-3UTR GCA 90 bp | GTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTCACAAGCCCCAACTAGAGGGAGCAGTTTCTCTTTaGGGGCTTCTCGATCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: VPCLQKQSPGLSHKPQLEGAVSL*GLLDHD Trigger: ATCATGATCGAGAAGCCCGCAAAGAGAAACTGCTCC...CTCTAGTTGGGGCTTGTGACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGGGCTAAGTCACAAGCCCCAACTAGAGTGGAATGTGGGTGGCGGCAGCCCCTCACAGGCATTTACTaGGTTGTTTATAAGGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: SRAKSQAPTRVECGWRQPLTGIY*VVYKDL Trigger: CAGATCCTTATAAACAACCCAGTAAATGCCTGTGAG...GGGCTGCCGCCACCCACATTCCACTCTAGTTGGGGCTTGTGACTTAGCCCTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CCA 90 bp | GAAACAGAGTCCAGGGCTAAGTCACAAGCCCCAACTAGAGTGGAATGTGGGTGGCTCTTCTTTCCCCTTTaGGCTCAGCTCACAGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: ETESRAKSQAPTRVECGWLFFPL*AQLTGI Trigger: AATGCCTGTGAGCTGAGCCCAAAGGGGAAAGAAGAG...CCACCCACATTCCACTCTAGTTGGGGCTTGTGACTTAGCCCTGGACTCTGTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGAATTGTCCAAGCTGACCAGATTATACAGGCCAATGCTCAGCCCTCGCTGTGGAGTGAGTCCACTTaGGACAGCATGGTTTCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: AGIVQADQIIQANAQPSLWSEST*DSMVSS Trigger: GCTAGAAACCATGCTGTCCCAAGTGGACTCACTCCA...CAGCGAGGGCTGAGCATTGGCCTGTATAATCTGGTCAGCTTGGACAATTCCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CCA 90 bp | AGTCCAGGGCTAAGTCACAAGCCCCAACTAGAGTGGAATGTGGGTGGCGGCAGCATTCTGTCCTTGGTTTaGCTGAAGGACTCTTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SPGLSHKPQLEWNVGGGSILSLV*LKDSCF Trigger: GAAACAAGAGTCCTTCAGCCAAACCAAGGACAGAAT...GCTGCCGCCACCCACATTCCACTCTAGTTGGGGCTTGTGACTTAGCCCTGGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
||
| CDS-3UTR CCA 90 bp | CCAATGCTCAGCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTTTGGCCGCTTTCTTTaGGTTTTTCCTGCATATGCT | + |
|
Preference number: 4 (lower is better) Translates to: PMLSPRCPLPAETESRAKFGRFL*VFPAYA Trigger: AGCATATGCAGGAAAAACCCAAAGAAAGCGGCCAAA...CTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCATTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000208766.2 |
||
| CDS-3UTR TCA 90 bp | GAAACAGAGTCCAGGGCTAAGTCACAAGCCCCAACTAGAGTGGAATGTGGGTGGCTAAGACATCAGAAATaGTGGTCTCCTGTGGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ETESRAKSQAPTRVECGWLRHQK*WSPVGL Trigger: CAAGCCCACAGGAGACCATCATTTCTGATGTCTTAG...CCACCCACATTCCACTCTAGTTGGGGCTTGTGACTTAGCCCTGGACTCTGTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR TCA 90 bp | CCAATGCTCAGCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGAGCAGAAACATTACTTaGACAAACCCCTGTCAAATC | + |
|
Preference number: 4 (lower is better) Translates to: PMLSPRCPLPAETESRAKSRNIT*TNPCQI Trigger: GATTTGACAGGGGTTTGTTCAAGTAATGTTTCTGCT...CTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCATTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR TCA 90 bp | GCTATCGTCTCTAAACTTGCCACCTTCCAGGATAGTGGGCACAATCTAGCCTATTCTCCTGCTCAGCTATaGGGAGTGACAACTGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: AIVSKLATFQDSGHNLAYSPAQL*GVTTAG Trigger: CCCAGCAGTTGTCACTCCTCATAGCTGAGCAGGAGA...ATAGGCTAGATTGTGCCCACTATCCTGGAAGGTGGCAAGTTTAGAGACGATAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR TCA 90 bp | GAAACAGAGTCCAGGGCTAAGTCACAAGCCCCAACTAGAGTGGAATGTGGGTGGGCAGGGCAGAAGTTATaGAGCCAGAGTTGTTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ETESRAKSQAPTRVECGWAGQKL*SQSCLK Trigger: CTTCAAACAACTCTGGCTTCATAACTTCTGCCCTGC...CCACCCACATTCCACTCTAGTTGGGGCTTGTGACTTAGCCCTGGACTCTGTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR TCA 90 bp | GCTATCGTCTCTAAACTTGCCACCTTCCAGGATAGTGGGCACAATCTAGCCTATACAAGGCCTTGTTCCTaGGACTCTGGTCACGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: AIVSKLATFQDSGHNLAYTRPCS*DSGHAT Trigger: AGTGGCGTGACCAGAGTCTCAGGAACAAGGCCTTGT...ATAGGCTAGATTGTGCCCACTATCCTGGAAGGTGGCAAGTTTAGAGACGATAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR TCA 90 bp | GTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTCACAAGCCCCAACTAGAGTCTGGATTAAAAACCTaGGACCATTTAGCTTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VPCLQKQSPGLSHKPQLESGLKT*DHLAWA Trigger: GGCCCAAGCTAAATGGTCTCAGGTTTTTAATCCAGA...CTCTAGTTGGGGCTTGTGACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR TCA 90 bp | GTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTCACAAGCCCCAACTAGAGCTTCAGAGGGGCTTCTaGCTGAAAACTTCGTATGAA | + |
|
Preference number: 4 (lower is better) Translates to: VPCLQKQSPGLSHKPQLELQRGF*LKTSYE Trigger: TTCATACGAAGTTTTCAGTCAGAAGCCCCTCTGAAG...CTCTAGTTGGGGCTTGTGACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
||
| CDS-3UTR TCA 90 bp | ATGCTCAGCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTCAACGAAGAAGATGTCATaGATACCATACAGAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: MLSPRCPLPAETESRAKSTKKMS*IPYRAA Trigger: AGCTGCTCTGTATGGTATTCATGACATCTTCTTCGT...TGACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
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| CDS-3UTR TCA 90 bp | ATGCTCAGCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTCAAAGGACTCTTGTTTCTaGGGGGTTTTGTTTAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: MLSPRCPLPAETESRAKSKDSCF*GVLFKQ Trigger: CTGCTTAAACAAAACCCCTCAGAAACAAGAGTCCTT...TGACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
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| CDS-3UTR TCA 90 bp | GACTCCCTCCCACACACCTGCGTAGTCACTGTGGATTCTTCGGTCATGCGCAGTAAGGACTCTTGTTTCTaGGGGGTTTTGTTTAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DSLPHTCVVTVDSSVMRSKDSCF*GVLFKQ Trigger: CTGCTTAAACAAAACCCCTCAGAAACAAGAGTCCTT...ACTGCGCATGACCGAAGAATCCACAGTGACTACGCAGGTGTGTGGGAGGGAGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
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| CDS-3UTR TCA 90 bp | GCAGGAATTGTCCAAGCTGACCAGATTATACAGGCCAATGCTCAGCCCTCGCTGTGTCCTTGGTTTGGCTaGAGGACTCTTGTTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: AGIVQADQIIQANAQPSLCPWFG*RTLVSE Trigger: CTCAGAAACAAGAGTCCTTCAGCCAAACCAAGGACA...CAGCGAGGGCTGAGCATTGGCCTGTATAATCTGGTCAGCTTGGACAATTCCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
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| CDS-3UTR GCA 90 bp | TGCTCAGCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTCACGTTCCATTTGTAAGTTaGAGGAGTTCTTTGCTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CSALAVPCLQKQSPGLSHVPFVS*RSSLLA Trigger: TGCTAGCAAAGAACTCCTGCAACTTACAAATGGAAC...GTGACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CCA 90 bp | CAATGCTCAGCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTCATTATGTAGGGATCTaGAGTGACTTCAGCCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: QCSALAVPCLQKQSPGLSHYVGI*SDFSQT Trigger: TGTTTGGCTGAAGTCACTCCAGATCCCTACATAATG...ACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CCA 90 bp | ATGCTCAGCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTCACATTATGTAGGGATCTaGAGTGACTTCAGCCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: MLSPRCPLPAETESRAKSHYVGI*SDFSQT Trigger: TGTTTGGCTGAAGTCACTCCAGATCCCTACATAATG...TGACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CCA 90 bp | ATGCTCAGCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTCAGCTTGTGAAGCACCTTaGAGGAGAACATTTGACTTA | + |
|
Preference number: 4 (lower is better) Translates to: MLSPRCPLPAETESRAKSACEAP*RRTFDL Trigger: TAAGTCAAATGTTCTCCTCCAAGGTGCTTCACAAGC...TGACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CCA 90 bp | CCAACTAGAGTGGAATGTGGGTGGCGGCAGCCCTGCTCCCTGCTTCATCCCAGTTTATTCTTGTTAATGTaGACGAATCCCTTGGGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: PTRVECGWRQPCSLLHPSLFLLM*TNPLGY Trigger: ATACCCCAAGGGATTCGTCCACATTAACAAGAATAA...ACTGGGATGAAGCAGGGAGCAGGGCTGCCGCCACCCACATTCCACTCTAGTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CCA 90 bp | CAATGCTCAGCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTCAGGAACTTCTTATTTaGCATTCCCATCTCAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: QCSALAVPCLQKQSPGLSQELLI*HSHLSN Trigger: GTTGCTGAGATGGGAATGCCAAATAAGAAGTTCCTG...ACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
||
| CDS-3UTR TCA 90 bp | GTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTCACAAGCCCCAACTAGAGGTTTCTGTTGCCCACTaGTCAAAATCACTGGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: VPCLQKQSPGLSHKPQLEVSVAH*SKSLAF Trigger: AAATGCCAGTGATTTTGATCAGTGGGCAACAGAAAC...CTCTAGTTGGGGCTTGTGACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 |
||
| CDS-3UTR TCA 90 bp | AGTCCAGGGCTAAGTCACAAGCCCCAACTAGAGTGGAATGTGGGTGGCGGCAGCATCGTTTTCTCTGTCTaGATGCGTTTCATTAACACT | + |
|
Preference number: 4 (lower is better) Translates to: SPGLSHKPQLEWNVGGGSIVFSV*MRFINT Trigger: AGTGTTAATGAAACGCATTCAGACAGAGAAAACGAT...GCTGCCGCCACCCACATTCCACTCTAGTTGGGGCTTGTGACTTAGCCCTGGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR GCA 90 bp | GCAGGAATTGTCCAAGCTGACCAGATTATACAGGCCAATGCTCAGCCCTCGCTGTTCTTCCTGTTGGCCTaGTTTCTTGACTGCACATCA | + |
|
Preference number: 4 (lower is better) Translates to: AGIVQADQIIQANAQPSLFFLLA*FLDCTS Trigger: TGATGTGCAGTCAAGAAAGCAGGCCAACAGGAAGAA...CAGCGAGGGCTGAGCATTGGCCTGTATAATCTGGTCAGCTTGGACAATTCCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 |
||
| CDS-3UTR CCA 90 bp | CAATGCTCAGCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTCTCACAGGCATTTACTaGGTTGTTTATAAGGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: QCSALAVPCLQKQSPGLSLTGIY*VVYKDL Trigger: CAGATCCTTATAAACAACCCAGTAAATGCCTGTGAG...ACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR TCA 90 bp | ATAGGAAATGAGGCAGGAATTGTCCAAGCTGACCAGATTATACAGGCCAATGCTACAAGGCCTTGTTCCTaGGACTCTGGTCACGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: IGNEAGIVQADQIIQANATRPCS*DSGHAT Trigger: AGTGGCGTGACCAGAGTCTCAGGAACAAGGCCTTGT...AGCATTGGCCTGTATAATCTGGTCAGCTTGGACAATTCCTGCCTCATTTCCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR TCA 90 bp | ATAGGAAATGAGGCAGGAATTGTCCAAGCTGACCAGATTATACAGGCCAATGCTGGAAGCATCTTGGGCTaGGACGACACCTCTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: IGNEAGIVQADQIIQANAGSILG*DDTSLQ Trigger: CTGAAGAGAGGTGTCGTCTCAGCCCAAGATGCTTCC...AGCATTGGCCTGTATAATCTGGTCAGCTTGGACAATTCCTGCCTCATTTCCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
||
| CDS-3UTR GCA 90 bp | AGTCCAGGGCTAAGTCACAAGCCCCAACTAGAGTGGAATGTGGGTGGCGGCAGCTTTTCTCTGTCTGAATaGGTTTCATTAACACTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SPGLSHKPQLEWNVGGGSFSLSE*VSLTLL Trigger: GAGAAGTGTTAATGAAACGCATTCAGACAGAGAAAA...GCTGCCGCCACCCACATTCCACTCTAGTTGGGGCTTGTGACTTAGCCCTGGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR GCA 90 bp | CCAATGCTCAGCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTTTTCTCTGTCTGAATaGGTTTCATTAACACTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PMLSPRCPLPAETESRAKFSLSE*VSLTLL Trigger: GAGAAGTGTTAATGAAACGCATTCAGACAGAGAAAA...CTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCATTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR GCA 90 bp | GACCTCTGGGCACATATAGTATGTTTATATAGGCTAAACTCAGAAACAAGGCAACAGAGCCACAGTGCCTaGCTATGGGCATGGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: DLWAHIVCLYRLNSETRQQSHSA*LWAWVG Trigger: CCCCACCCATGCCCATAGGCAGGCACTGTGGCTCTG...TTGCCTTGTTTCTGAGTTTAGCCTATATAAACATACTATATGTGCCCAGAGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR GCA 90 bp | GCTGCCACAGGCCGGACAGACCACATGAGGTATGCGATGACCATTTCTGATGACCAAAAGCTAACATCTTaGTTTTCAGTAGTTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: AATGRTDHMRYAMTISDDQKLTS*FSVVPG Trigger: GCCAGGAACTACTGAAAAGCAAGATGTTAGCTTTTG...GTCATCAGAAATGGTCATCGCATACCTCATGTGGTCTGTCCGGCCTGTGGCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
||
| CDS-3UTR CCA 90 bp | ATGCTCAGCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTCAAAAATCACTGGCATTTaGTGCTTTTCTAACCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: MLSPRCPLPAETESRAKSKITGI*CFSNLN Trigger: GTTCAGGTTAGAAAAGCACCAAATGCCAGTGATTTT...TGACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 |
||
| CDS-3UTR CCA 90 bp | TTAATAGGAAATGAGGCAGGAATTGTCCAAGCTGACCAGATTATACAGGCCAATCACAGTGCCTGCCTATaGGCATGGGTGGGGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LIGNEAGIVQADQIIQANHSACL*AWVGPS Trigger: AGAAGGCCCCACCCATGCCCATAGGCAGGCACTGTG...ATTGGCCTGTATAATCTGGTCAGCTTGGACAATTCCTGCCTCATTTCCTATTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CCA 90 bp | GCTATCGTCTCTAAACTTGCCACCTTCCAGGATAGTGGGCACAATCTAGCCTATTGGAGTGAGTCCACTTaGGACAGCATGGTTTCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: AIVSKLATFQDSGHNLAYWSEST*DSMVSS Trigger: GCTAGAAACCATGCTGTCCCAAGTGGACTCACTCCA...ATAGGCTAGATTGTGCCCACTATCCTGGAAGGTGGCAAGTTTAGAGACGATAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CCA 90 bp | ACATTAATAGGAAATGAGGCAGGAATTGTCCAAGCTGACCAGATTATACAGGCCCTCTGGTCACGCCACTaGTCAGTGATCCCCAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TLIGNEAGIVQADQIIQALWSRH*SVIPRG Trigger: ACCTCTGGGGATCACTGACCAGTGGCGTGACCAGAG...GGCCTGTATAATCTGGTCAGCTTGGACAATTCCTGCCTCATTTCCTATTAATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| CDS-3UTR CCA 90 bp | AGTCCAGGGCTAAGTCACAAGCCCCAACTAGAGTGGAATGTGGGTGGCGGCAGCTTTTGCGTGTATTTCTaGATTAAAAACCTGAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: SPGLSHKPQLEWNVGGGSFCVYF*IKNLRP Trigger: TGGTCTCAGGTTTTTAATCCAGAAATACACGCAAAA...GCTGCCGCCACCCACATTCCACTCTAGTTGGGGCTTGTGACTTAGCCCTGGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR TCA 90 bp | GCTATCGTCTCTAAACTTGCCACCTTCCAGGATAGTGGGCACAATCTAGCCTATGCAGGGCAGAAGTTATaGAGCCAGAGTTGTTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AIVSKLATFQDSGHNLAYAGQKL*SQSCLK Trigger: CTTCAAACAACTCTGGCTTCATAACTTCTGCCCTGC...ATAGGCTAGATTGTGCCCACTATCCTGGAAGGTGGCAAGTTTAGAGACGATAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR TCA 90 bp | GCTATCGTCTCTAAACTTGCCACCTTCCAGGATAGTGGGCACAATCTAGCCTATTCTCAGCAACTTTCATaGACTTCTTCCTGTCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: AIVSKLATFQDSGHNLAYSQQLS*TSSCPG Trigger: CCCTGGACAGGAAGAAGTTCATGAAAGTTGCTGAGA...ATAGGCTAGATTGTGCCCACTATCCTGGAAGGTGGCAAGTTTAGAGACGATAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR TCA 90 bp | GCTATCGTCTCTAAACTTGCCACCTTCCAGGATAGTGGGCACAATCTAGCCTATCTACTAAGTAGCCTATaGACGGGTGCATTCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AIVSKLATFQDSGHNLAYLLSSL*TGAFCP Trigger: AGGACAGAATGCACCCGTTCATAGGCTACTTAGTAG...ATAGGCTAGATTGTGCCCACTATCCTGGAAGGTGGCAAGTTTAGAGACGATAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR GCA 90 bp | TTGTTGGCTGATGTGTTTAGTGTTAGTCATGAAAGCCATAAATCTGAGTACCTTCAGAGCCACAGTGCCTaGCTATGGGCATGGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLADVFSVSHESHKSEYLQSHSA*LWAWVG Trigger: CCCCACCCATGCCCATAGGCAGGCACTGTGGCTCTG...AAGGTACTCAGATTTATGGCTTTCATGACTAACACTAAACACATCAGCCAACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR GCA 90 bp | GTGAGTGCTGTCTTCTTAAATTGTCGCAACATTTGGCCGCTTTCTTTGGGTTTTGGCGGTGTGTCCATCTaGTGTCTGGAAGTCTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VSAVFLNCRNIWPLSLGFGGVSI*CLEVWV Trigger: AACCCAGACTTCCAGACAGCAGATGGACACACCGCC...AAAACCCAAAGAAAGCGGCCAAATGTTGCGACAATTTAAGAAGACAGCACTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
||
| CDS-3UTR GCA 90 bp | GAAACAGAGTCCAGGGCTAAGTCACAAGCCCCAACTAGAGTGGAATGTGGGTGGCAAAAGCTAACATCTTaGTTTTCAGTAGTTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ETESRAKSQAPTRVECGWQKLTS*FSVVPG Trigger: GCCAGGAACTACTGAAAAGCAAGATGTTAGCTTTTG...CCACCCACATTCCACTCTAGTTGGGGCTTGTGACTTAGCCCTGGACTCTGTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CCA 90 bp | ACATTAATAGGAAATGAGGCAGGAATTGTCCAAGCTGACCAGATTATACAGGCCTGCCTGCCTGCTTTCTaGACTCTCACACTGCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TLIGNEAGIVQADQIIQACLPAF*TLTLPQ Trigger: CTGAGGCAGTGTGAGAGTCCAGAAAGCAGGCAGGCA...GGCCTGTATAATCTGGTCAGCTTGGACAATTCCTGCCTCATTTCCTATTAATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR TCA 90 bp | GAAACAGAGTCCAGGGCTAAGTCACAAGCCCCAACTAGAGTGGAATGTGGGTGGTTGGAGGAGAACATTTaGCTTATTAAGGCTTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ETESRAKSQAPTRVECGWLEENI*LIKAWF Trigger: AAACCAAGCCTTAATAAGTCAAATGTTCTCCTCCAA...CCACCCACATTCCACTCTAGTTGGGGCTTGTGACTTAGCCCTGGACTCTGTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR GCA 90 bp | ATAGGAAATGAGGCAGGAATTGTCCAAGCTGACCAGATTATACAGGCCAATGCTATGAGGAGTGACAACTaGTGGGCATGCTGTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IGNEAGIVQADQIIQANAMRSDN*WACCSS Trigger: AGAGGAACAGCATGCCCAGCAGTTGTCACTCCTCAT...AGCATTGGCCTGTATAATCTGGTCAGCTTGGACAATTCCTGCCTCATTTCCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| 3UTR CAA 72 bp | GGGGAGACTAGGATTAAGTCAAGCTCCCTCCATCGTTaGGGGATTATATTGCTGCCTATGAGTGTCAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GETRIKSSSLHR*GIILLPMSVRK Trigger: CTTTCTGACACTCATAGGCAGCAATATAATCCCCAAACGATGGAGGGAGCTTGACTTAATCCTAGTCTCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
||
| 3UTR CAA 72 bp | TCCCATCAGTTCCTGCTCTACTCTGGTCCGTGGTTTTaGGACCTGCTGAATGTCTGCTCTAACATACACAAA | + |
|
Preference number: 4 (lower is better) Translates to: SHQFLLYSGPWF*DLLNVCSNIHK Trigger: TTTGTGTATGTTAGAGCAGACATTCAGCAGGTCCAAAAACCACGGACCAGAGTAGAGCAGGAACTGATGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
||
| CDS-3UTR TCA 90 bp | GTGAGTGCTGTCTTCTTAAATTGTCGCAACATTTGGCCGCTTTCTTTGGGTTTTTTCCAAGGTTTGACTTaGCACACACTGACTGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VSAVFLNCRNIWPLSLGFFQGLT*HTLTAG Trigger: CCCAGCAGTCAGTGTGTGTCAAGTCAAACCTTGGAA...AAAACCCAAAGAAAGCGGCCAAATGTTGCGACAATTTAAGAAGACAGCACTCAC 46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
||
| CDS-3UTR TCA 90 bp | GTCATGAAAGCCATAAATCTGAGTACCTTTACTGCAGGCTTTAAACTAGACAGTTCTCCTGCTCAGCTATaGGGAGTGACAACTGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VMKAINLSTFTAGFKLDSSPAQL*GVTTAG Trigger: CCCAGCAGTTGTCACTCCTCATAGCTGAGCAGGAGA...ACTGTCTAGTTTAAAGCCTGCAGTAAAGGTACTCAGATTTATGGCTTTCATGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR TCA 90 bp | GTTCAAATCTACACAATCCCAATGTTACATGAGAAGCACAAAGCCCTTTTTGGAGGAAGCATCTTGGGCTaGGACGACACCTCTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VQIYTIPMLHEKHKALFGGSILG*DDTSLQ Trigger: CTGAAGAGAGGTGTCGTCTCAGCCCAAGATGCTTCC...TCCAAAAAGGGCTTTGTGCTTCTCATGTAACATTGGGATTGTGTAGATTTGAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| CDS-3UTR TCA 90 bp | GTTCAAATCTACACAATCCCAATGTTACATGAGAAGCACAAAGCCCTTTTTGGACTTCTGTGTTGCCACTaGAAGCGCCACTCGTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: VQIYTIPMLHEKHKALFGLLCCH*KRHSWT Trigger: AGTCCACGAGTGGCGCTTTCAGTGGCAACACAGAAG...TCCAAAAAGGGCTTTGTGCTTCTCATGTAACATTGGGATTGTGTAGATTTGAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| CDS-3UTR GCA 90 bp | TTAATAGGAAATGAGGCAGGAATTGTCCAAGCTGACCAGATTATACAGGCCAATAGCAGCTCCATCTTCTaGCTGCCTGCTTTCTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: LIGNEAGIVQADQIIQANSSSIF*LPAFWT Trigger: AGTCCAGAAAGCAGGCAGGCAGAAGATGGAGCTGCT...ATTGGCCTGTATAATCTGGTCAGCTTGGACAATTCCTGCCTCATTTCCTATTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| CDS-3UTR GCA 90 bp | GCAGGAATTGTCCAAGCTGACCAGATTATACAGGCCAATGCTCAGCCCTCGCTGTTTTCTCTGTCTGAATaGGTTTCATTAACACTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: AGIVQADQIIQANAQPSLFSLSE*VSLTLL Trigger: GAGAAGTGTTAATGAAACGCATTCAGACAGAGAAAA...CAGCGAGGGCTGAGCATTGGCCTGTATAATCTGGTCAGCTTGGACAATTCCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| CDS-3UTR GCA 90 bp | GACCTCTGGGCACATATAGTATGTTTATATAGGCTAAACTCAGAAACAAGGCAACTGCCGTGCCCATGCTaGTTGCTTGTGAAGCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: DLWAHIVCLYRLNSETRQLPCPC*LLVKHL Trigger: AAGGTGCTTCACAAGCAAGCAGCATGGGCACGGCAG...TTGCCTTGTTTCTGAGTTTAGCCTATATAAACATACTATATGTGCCCAGAGGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| CDS-3UTR GCA 90 bp | GTTCAAATCTACACAATCCCAATGTTACATGAGAAGCACAAAGCCCTTTTTGGATCCTGCTCCCTCTCCTaGTCAGCTATGAGGAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VQIYTIPMLHEKHKALFGSCSLS*SAMRSD Trigger: GTCACTCCTCATAGCTGAGCAGGAGAGGGAGCAGGA...TCCAAAAAGGGCTTTGTGCTTCTCATGTAACATTGGGATTGTGTAGATTTGAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| CDS-3UTR GCA 90 bp | AAAAGGGTGACTGTAGACCTCTGGGCACATATAGTATGTTTATATAGGCTAAACCCAGAGGTAGAACGGTaGTTCACCTGCAGAGCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: KRVTVDLWAHIVCLYRLNPEVER*FTCRAE Trigger: TTCGGCTCTGCAGGTGAAGCACCGTTCTACCTCTGG...GTTTAGCCTATATAAACATACTATATGTGCCCAGAGGTCTACAGTCACCCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| CDS-3UTR GCA 90 bp | GTCATGAAAGCCATAAATCTGAGTACCTTTACTGCAGGCTTTAAACTAGACAGTCCAGAGGTAGAACGGTaGTTCACCTGCAGAGCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: VMKAINLSTFTAGFKLDSPEVER*FTCRAE Trigger: TTCGGCTCTGCAGGTGAAGCACCGTTCTACCTCTGG...ACTGTCTAGTTTAAAGCCTGCAGTAAAGGTACTCAGATTTATGGCTTTCATGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| CDS-3UTR GCA 90 bp | ATAGGAAATGAGGCAGGAATTGTCCAAGCTGACCAGATTATACAGGCCAATGCTGGAGCAGTTTCTCTTTaGGGGCTTCTCGATCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: IGNEAGIVQADQIIQANAGAVSL*GLLDHD Trigger: ATCATGATCGAGAAGCCCGCAAAGAGAAACTGCTCC...AGCATTGGCCTGTATAATCTGGTCAGCTTGGACAATTCCTGCCTCATTTCCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
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| CDS-3UTR CCA 90 bp | GTCATGAAAGCCATAAATCTGAGTACCTTTACTGCAGGCTTTAAACTAGACAGTTTGGTTTGTCAGGGATaGCAGAGCCACAGTGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VMKAINLSTFTAGFKLDSLVCQG*QSHSAC Trigger: GCAGGCACTGTGGCTCTGCCATCCCTGACAAACCAA...ACTGTCTAGTTTAAAGCCTGCAGTAAAGGTACTCAGATTTATGGCTTTCATGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| 3UTR CAA 72 bp | CCCAGTGAGTGCTGTCTTCTTAAATTGTCGCAACATTaGGCCGCTTTCTTTGGGTTTTTCCTGCATATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PSECCLLKLSQH*AAFFGFFLHML Trigger: GAGCATATGCAGGAAAAACCCAAAGAAAGCGGCCAAATGTTGCGACAATTTAAGAAGACAGCACTCACTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
||
| CDS-3UTR TCA 90 bp | TCTATAAAACAACTAGCTGTCTGCAGGAATGTGTGCTTCTACCCAAAACCAAGAGCAGACTGGCTGACTTaGGTTCACACACATCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SIKQLAVCRNVCFYPKPRADWLT*VHTHLP Trigger: TGGAAGATGTGTGTGAACTCAAGTCAGCCAGTCTGC...TCTTGGTTTTGGGTAGAAGCACACATTCCTGCAGACAGCTAGTTGTTTTATAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| CDS-3UTR TCA 90 bp | GTTCAAATCTACACAATCCCAATGTTACATGAGAAGCACAAAGCCCTTTTTGGAGCTAACACTCGTTCCTaGAGGGAAGCATCTTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VQIYTIPMLHEKHKALFGANTRS*REASWA Trigger: AGCCCAAGATGCTTCCCTTCAGGAACGAGTGTTAGC...TCCAAAAAGGGCTTTGTGCTTCTCATGTAACATTGGGATTGTGTAGATTTGAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR TCA 90 bp | GACCTCTGGGCACATATAGTATGTTTATATAGGCTAAACTCAGAAACAAGGCAAGCTAACACTCGTTCCTaGAGGGAAGCATCTTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: DLWAHIVCLYRLNSETRQANTRS*REASWA Trigger: AGCCCAAGATGCTTCCCTTCAGGAACGAGTGTTAGC...TTGCCTTGTTTCTGAGTTTAGCCTATATAAACATACTATATGTGCCCAGAGGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
||
| CDS-3UTR TCA 90 bp | ACATTAATAGGAAATGAGGCAGGAATTGTCCAAGCTGACCAGATTATACAGGCCTGTCCTTGGTTTGGCTaGAGGACTCTTGTTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TLIGNEAGIVQADQIIQACPWFG*RTLVSE Trigger: CTCAGAAACAAGAGTCCTTCAGCCAAACCAAGGACA...GGCCTGTATAATCTGGTCAGCTTGGACAATTCCTGCCTCATTTCCTATTAATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
||
| CDS-3UTR GCA 90 bp | TTAATAGGAAATGAGGCAGGAATTGTCCAAGCTGACCAGATTATACAGGCCAATATGAGGAGTGACAACTaGTGGGCATGCTGTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LIGNEAGIVQADQIIQANMRSDN*WACCSS Trigger: AGAGGAACAGCATGCCCAGCAGTTGTCACTCCTCAT...ATTGGCCTGTATAATCTGGTCAGCTTGGACAATTCCTGCCTCATTTCCTATTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR GCA 90 bp | AAAAGGGTGACTGTAGACCTCTGGGCACATATAGTATGTTTATATAGGCTAAACTTTTGCAGTTGCTCCTaGTCCCTCTCCTGCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KRVTVDLWAHIVCLYRLNFCSCS*SLSCSA Trigger: AGCTGAGCAGGAGAGGGAGCAGGAGCAACTGCAAAA...GTTTAGCCTATATAAACATACTATATGTGCCCAGAGGTCTACAGTCACCCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR GCA 90 bp | GACCTCTGGGCACATATAGTATGTTTATATAGGCTAAACTCAGAAACAAGGCAATTTTGCAGTTGCTCCTaGTCCCTCTCCTGCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: DLWAHIVCLYRLNSETRQFCSCS*SLSCSA Trigger: AGCTGAGCAGGAGAGGGAGCAGGAGCAACTGCAAAA...TTGCCTTGTTTCTGAGTTTAGCCTATATAAACATACTATATGTGCCCAGAGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR GCA 90 bp | ACATTAATAGGAAATGAGGCAGGAATTGTCCAAGCTGACCAGATTATACAGGCCTTGTCTCCACTCCAGTaGACTGTTCAAGTCAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: TLIGNEAGIVQADQIIQALSPLQ*TVQVRD Trigger: GTCTCTGACTTGAACAGTGCACTGGAGTGGAGACAA...GGCCTGTATAATCTGGTCAGCTTGGACAATTCCTGCCTCATTTCCTATTAATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR GCA 90 bp | ACATTAATAGGAAATGAGGCAGGAATTGTCCAAGCTGACCAGATTATACAGGCCGGAGCAGTTTCTCTTTaGGGGCTTCTCGATCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: TLIGNEAGIVQADQIIQAGAVSL*GLLDHD Trigger: ATCATGATCGAGAAGCCCGCAAAGAGAAACTGCTCC...GGCCTGTATAATCTGGTCAGCTTGGACAATTCCTGCCTCATTTCCTATTAATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
||
| CDS-3UTR CCA 90 bp | TCTATAAAACAACTAGCTGTCTGCAGGAATGTGTGCTTCTACCCAAAACCAAGAAGTACAGCCACCCCATaGAAACGGATGAGTGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: SIKQLAVCRNVCFYPKPRSTATP*KRMSET Trigger: TGTCTCACTCATCCGTTTCCATGGGGTGGCTGTACT...TCTTGGTTTTGGGTAGAAGCACACATTCCTGCAGACAGCTAGTTGTTTTATAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 |
||
| CDS-3UTR CCA 90 bp | TTGTTGGCTGATGTGTTTAGTGTTAGTCATGAAAGCCATAAATCTGAGTACCTTTGCCTGCCTGCTTTCTaGACTCTCACACTGCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLADVFSVSHESHKSEYLCLPAF*TLTLPQ Trigger: CTGAGGCAGTGTGAGAGTCCAGAAAGCAGGCAGGCA...AAGGTACTCAGATTTATGGCTTTCATGACTAACACTAAACACATCAGCCAACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CCA 90 bp | CAAAACGTCTTAACCAGAACACCAACAAGTATCAAAGCATTTGGTAAGAGTTTTGCCTGCCTATGGGCATaGGTGGGGCCTTCTCCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: QNVLTRTPTSIKAFGKSFACLWA*VGPSPL Trigger: TAAAGGAGAAGGCCCCACCCATGCCCATAGGCAGGC...AAAACTCTTACCAAATGCTTTGATACTTGTTGGTGTTCTGGTTAAGACGTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
||
| CDS-3UTR TCA 90 bp | TCTATAAAACAACTAGCTGTCTGCAGGAATGTGTGCTTCTACCCAAAACCAAGAGTTGGCCTGCTTTCTTaGCTGCACATCAAGTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SIKQLAVCRNVCFYPKPRVGLLS*LHIKCF Trigger: AAAGCACTTGATGTGCAGTCAAGAAAGCAGGCCAAC...TCTTGGTTTTGGGTAGAAGCACACATTCCTGCAGACAGCTAGTTGTTTTATAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 |
||
| CDS-3UTR TCA 90 bp | GTGAGTGCTGTCTTCTTAAATTGTCGCAACATTTGGCCGCTTTCTTTGGGTTTTCTTCAGAGGGGCTTCTaGCTGAAAACTTCGTATGAA | + |
|
Preference number: 4 (lower is better) Translates to: VSAVFLNCRNIWPLSLGFLQRGF*LKTSYE Trigger: TTCATACGAAGTTTTCAGTCAGAAGCCCCTCTGAAG...AAAACCCAAAGAAAGCGGCCAAATGTTGCGACAATTTAAGAAGACAGCACTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
||
| CDS-3UTR GCA 90 bp | TTAGTGTTAGTCATGAAAGCCATAAATCTGAGTACCTTTACTGCAGGCTTTAAACTGCCGTGCCCATGCTaGTTGCTTGTGAAGCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: LVLVMKAINLSTFTAGFKLPCPC*LLVKHL Trigger: AAGGTGCTTCACAAGCAAGCAGCATGGGCACGGCAG...TTTAAAGCCTGCAGTAAAGGTACTCAGATTTATGGCTTTCATGACTAACACTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR GCA 90 bp | GTTCAAATCTACACAATCCCAATGTTACATGAGAAGCACAAAGCCCTTTTTGGACTGGAAGTCTGGGTTTaGGTAAGTAAGGGAGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: VQIYTIPMLHEKHKALFGLEVWV*VSKGDG Trigger: CCCATCTCCCTTACTTACGCAAACCCAGACTTCCAG...TCCAAAAAGGGCTTTGTGCTTCTCATGTAACATTGGGATTGTGTAGATTTGAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR GCA 90 bp | GTCATGAAAGCCATAAATCTGAGTACCTTTACTGCAGGCTTTAAACTAGACAGTCTGGAAGTCTGGGTTTaGGTAAGTAAGGGAGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: VMKAINLSTFTAGFKLDSLEVWV*VSKGDG Trigger: CCCATCTCCCTTACTTACGCAAACCCAGACTTCCAG...ACTGTCTAGTTTAAAGCCTGCAGTAAAGGTACTCAGATTTATGGCTTTCATGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR GCA 90 bp | TCTATAAAACAACTAGCTGTCTGCAGGAATGTGTGCTTCTACCCAAAACCAAGAGACAACTGCTGGGCATaGTGTTCCTCTAGTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SIKQLAVCRNVCFYPKPRDNCWA*CSSSLF Trigger: AAAGAGACTAGAGGAACAGCATGCCCAGCAGTTGTC...TCTTGGTTTTGGGTAGAAGCACACATTCCTGCAGACAGCTAGTTGTTTTATAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR GCA 90 bp | TTAGTGTTAGTCATGAAAGCCATAAATCTGAGTACCTTTACTGCAGGCTTTAAATCCTGCTCCCTCTCCTaGTCAGCTATGAGGAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LVLVMKAINLSTFTAGFKSCSLS*SAMRSD Trigger: GTCACTCCTCATAGCTGAGCAGGAGAGGGAGCAGGA...TTTAAAGCCTGCAGTAAAGGTACTCAGATTTATGGCTTTCATGACTAACACTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR GCA 90 bp | GTCATGAAAGCCATAAATCTGAGTACCTTTACTGCAGGCTTTAAACTAGACAGTATTTCCTTTTGCAGTTaGTCCTGCTCCCTCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VMKAINLSTFTAGFKLDSISFCS*SCSLSC Trigger: GCAGGAGAGGGAGCAGGAGCAACTGCAAAAGGAAAT...ACTGTCTAGTTTAAAGCCTGCAGTAAAGGTACTCAGATTTATGGCTTTCATGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR GCA 90 bp | TCTATAAAACAACTAGCTGTCTGCAGGAATGTGTGCTTCTACCCAAAACCAAGATTGTCTCCACTCCAGTaGACTGTTCAAGTCAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SIKQLAVCRNVCFYPKPRLSPLQ*TVQVRD Trigger: GTCTCTGACTTGAACAGTGCACTGGAGTGGAGACAA...TCTTGGTTTTGGGTAGAAGCACACATTCCTGCAGACAGCTAGTTGTTTTATAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR GCA 90 bp | TCTATAAAACAACTAGCTGTCTGCAGGAATGTGTGCTTCTACCCAAAACCAAGAGGAGCAGTTTCTCTTTaGGGGCTTCTCGATCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: SIKQLAVCRNVCFYPKPRGAVSL*GLLDHD Trigger: ATCATGATCGAGAAGCCCGCAAAGAGAAACTGCTCC...TCTTGGTTTTGGGTAGAAGCACACATTCCTGCAGACAGCTAGTTGTTTTATAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CCA 90 bp | GTCATGAAAGCCATAAATCTGAGTACCTTTACTGCAGGCTTTAAACTAGACAGTAGTACAGCCACCCCATaGAAACGGATGAGTGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: VMKAINLSTFTAGFKLDSSTATP*KRMSET Trigger: TGTCTCACTCATCCGTTTCCATGGGGTGGCTGTACT...ACTGTCTAGTTTAAAGCCTGCAGTAAAGGTACTCAGATTTATGGCTTTCATGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 |
||
| CDS-3UTR CCA 90 bp | GACCTCTGGGCACATATAGTATGTTTATATAGGCTAAACTCAGAAACAAGGCAACTCTTCTTTCCCCTTTaGGCTCAGCTCACAGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: DLWAHIVCLYRLNSETRQLFFPL*AQLTGI Trigger: AATGCCTGTGAGCTGAGCCCAAAGGGGAAAGAAGAG...TTGCCTTGTTTCTGAGTTTAGCCTATATAAACATACTATATGTGCCCAGAGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| 3UTR CAA 72 bp | ATTAAGTCAAGCTCCCTCCATCGTTTGGGGATTATATaGCTGCCTATGAGTGTCAGAAAGCAGCAGTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: IKSSSLHRLGII*LPMSVRKQQLK Trigger: TTTCAACTGCTGCTTTCTGACACTCATAGGCAGCAATATAATCCCCAAACGATGGAGGGAGCTTGACTTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
||
| CDS-3UTR TCA 90 bp | TTAATAGGAAATGAGGCAGGAATTGTCCAAGCTGACCAGATTATACAGGCCAATCTTTTCAAGCTTTACTaGAGTACAGTGTTCGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LIGNEAGIVQADQIIQANLFKLY*STVFGG Trigger: CCCACCGAACACTGTACTTCAGTAAAGCTTGAAAAG...ATTGGCCTGTATAATCTGGTCAGCTTGGACAATTCCTGCCTCATTTCCTATTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 |
||
| CDS-3UTR TCA 90 bp | TCTATAAAACAACTAGCTGTCTGCAGGAATGTGTGCTTCTACCCAAAACCAAGATCTGGATTAAAAACCTaGGACCATTTAGCTTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SIKQLAVCRNVCFYPKPRSGLKT*DHLAWA Trigger: GGCCCAAGCTAAATGGTCTCAGGTTTTTAATCCAGA...TCTTGGTTTTGGGTAGAAGCACACATTCCTGCAGACAGCTAGTTGTTTTATAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR TCA 90 bp | ACATTAATAGGAAATGAGGCAGGAATTGTCCAAGCTGACCAGATTATACAGGCCACGAAGAAGATGTCATaGATACCATACAGAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TLIGNEAGIVQADQIIQATKKMS*IPYRAA Trigger: AGCTGCTCTGTATGGTATTCATGACATCTTCTTCGT...GGCCTGTATAATCTGGTCAGCTTGGACAATTCCTGCCTCATTTCCTATTAATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
||
| CDS-3UTR TCA 90 bp | AAAAGGGTGACTGTAGACCTCTGGGCACATATAGTATGTTTATATAGGCTAAACCTACTAAGTAGCCTATaGACGGGTGCATTCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KRVTVDLWAHIVCLYRLNLLSSL*TGAFCP Trigger: AGGACAGAATGCACCCGTTCATAGGCTACTTAGTAG...GTTTAGCCTATATAAACATACTATATGTGCCCAGAGGTCTACAGTCACCCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
||
| CDS-3UTR TCA 90 bp | GTTCAAATCTACACAATCCCAATGTTACATGAGAAGCACAAAGCCCTTTTTGGAAGGCACTCTGCTCTGTaGAGGCTTCTGTCTATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VQIYTIPMLHEKHKALFGRHSAL*RLLSIL Trigger: CAAAATAGACAGAAGCCTTCACAGAGCAGAGTGCCT...TCCAAAAAGGGCTTTGTGCTTCTCATGTAACATTGGGATTGTGTAGATTTGAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 |
||
| CDS-3UTR TCA 90 bp | GACCTCTGGGCACATATAGTATGTTTATATAGGCTAAACTCAGAAACAAGGCAAAGGCACTCTGCTCTGTaGAGGCTTCTGTCTATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: DLWAHIVCLYRLNSETRQRHSAL*RLLSIL Trigger: CAAAATAGACAGAAGCCTTCACAGAGCAGAGTGCCT...TTGCCTTGTTTCTGAGTTTAGCCTATATAAACATACTATATGTGCCCAGAGGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 |
||
| CDS-3UTR GCA 90 bp | ATAGGAAATGAGGCAGGAATTGTCCAAGCTGACCAGATTATACAGGCCAATGCTGTTCCATTTGTAAGTTaGAGGAGTTCTTTGCTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: IGNEAGIVQADQIIQANAVPFVS*RSSLLA Trigger: TGCTAGCAAAGAACTCCTGCAACTTACAAATGGAAC...AGCATTGGCCTGTATAATCTGGTCAGCTTGGACAATTCCTGCCTCATTTCCTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR GCA 90 bp | GACCTCTGGGCACATATAGTATGTTTATATAGGCTAAACTCAGAAACAAGGCAAGACAACTGCTGGGCATaGTGTTCCTCTAGTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: DLWAHIVCLYRLNSETRQDNCWA*CSSSLF Trigger: AAAGAGACTAGAGGAACAGCATGCCCAGCAGTTGTC...TTGCCTTGTTTCTGAGTTTAGCCTATATAAACATACTATATGTGCCCAGAGGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CCA 90 bp | GCTATCGTCTCTAAACTTGCCACCTTCCAGGATAGTGGGCACAATCTAGCCTATTTTTGCGTGTATTTCTaGATTAAAAACCTGAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: AIVSKLATFQDSGHNLAYFCVYF*IKNLRP Trigger: TGGTCTCAGGTTTTTAATCCAGAAATACACGCAAAA...ATAGGCTAGATTGTGCCCACTATCCTGGAAGGTGGCAAGTTTAGAGACGATAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CCA 90 bp | ACATTAATAGGAAATGAGGCAGGAATTGTCCAAGCTGACCAGATTATACAGGCCCAGGAACTTCTTATTTaGCATTCCCATCTCAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: TLIGNEAGIVQADQIIQAQELLI*HSHLSN Trigger: GTTGCTGAGATGGGAATGCCAAATAAGAAGTTCCTG...GGCCTGTATAATCTGGTCAGCTTGGACAATTCCTGCCTCATTTCCTATTAATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
||
| CDS-3UTR CCA 90 bp | GTGAGTGCTGTCTTCTTAAATTGTCGCAACATTTGGCCGCTTTCTTTGGGTTTTATTCTGTCCTTGGTTTaGCTGAAGGACTCTTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VSAVFLNCRNIWPLSLGFILSLV*LKDSCF Trigger: GAAACAAGAGTCCTTCAGCCAAACCAAGGACAGAAT...AAAACCCAAAGAAAGCGGCCAAATGTTGCGACAATTTAAGAAGACAGCACTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
||
| CDS-3UTR CCA 90 bp | ACATTAATAGGAAATGAGGCAGGAATTGTCCAAGCTGACCAGATTATACAGGCCTTTGGCCGCTTTCTTTaGGTTTTTCCTGCATATGCT | + |
|
Preference number: 4 (lower is better) Translates to: TLIGNEAGIVQADQIIQAFGRFL*VFPAYA Trigger: AGCATATGCAGGAAAAACCCAAAGAAAGCGGCCAAA...GGCCTGTATAATCTGGTCAGCTTGGACAATTCCTGCCTCATTTCCTATTAATGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000208766.2 |
||
| CDS-3UTR TCA 90 bp | ACATTAATAGGAAATGAGGCAGGAATTGTCCAAGCTGACCAGATTATACAGGCCAGCAGAAACATTACTTaGACAAACCCCTGTCAAATC | + |
|
Preference number: 4 (lower is better) Translates to: TLIGNEAGIVQADQIIQASRNIT*TNPCQI Trigger: GATTTGACAGGGGTTTGTTCAAGTAATGTTTCTGCT...GGCCTGTATAATCTGGTCAGCTTGGACAATTCCTGCCTCATTTCCTATTAATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR GCA 90 bp | TTAGTGTTAGTCATGAAAGCCATAAATCTGAGTACCTTTACTGCAGGCTTTAAAAGCGGTTCTATCCACTaGCTCTTCTTTCCCCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LVLVMKAINLSTFTAGFKSGSIH*LFFPLW Trigger: CCAAAGGGGAAAGAAGAGGCAGTGGATAGAACCGCT...TTTAAAGCCTGCAGTAAAGGTACTCAGATTTATGGCTTTCATGACTAACACTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR GCA 90 bp | GACCTCTGGGCACATATAGTATGTTTATATAGGCTAAACTCAGAAACAAGGCAAGGCTTCTGTCTATTTTaGACAACCCCCTTCACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: DLWAHIVCLYRLNSETRQGFCLF*TTPFTE Trigger: TTCAGTGAAGGGGGTTGTGCAAAATAGACAGAAGCC...TTGCCTTGTTTCTGAGTTTAGCCTATATAAACATACTATATGTGCCCAGAGGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 |
||
| CDS-3UTR CCA 90 bp | TCTATAAAACAACTAGCTGTCTGCAGGAATGTGTGCTTCTACCCAAAACCAAGACAGGAACTTCTTATTTaGCATTCCCATCTCAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SIKQLAVCRNVCFYPKPRQELLI*HSHLSN Trigger: GTTGCTGAGATGGGAATGCCAAATAAGAAGTTCCTG...TCTTGGTTTTGGGTAGAAGCACACATTCCTGCAGACAGCTAGTTGTTTTATAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CCA 90 bp | ACATTAATAGGAAATGAGGCAGGAATTGTCCAAGCTGACCAGATTATACAGGCCAATTGTCGCAACATTTaGCCGCTTTCTTTGGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TLIGNEAGIVQADQIIQANCRNI*PLSLGF Trigger: AAAACCCAAAGAAAGCGGCCAAATGTTGCGACAATT...GGCCTGTATAATCTGGTCAGCTTGGACAATTCCTGCCTCATTTCCTATTAATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000208766.2 |
||
| CDS-3UTR TCA 90 bp | CTCTGGGCACATATAGTATGTTTATATAGGCTAAACTCAGAAACAAGGCAATTATCTCAGCAACTTTCATaGACTTCTTCCTGTCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LWAHIVCLYRLNSETRQLSQQLS*TSSCPG Trigger: CCCTGGACAGGAAGAAGTTCATGAAAGTTGCTGAGA...TAATTGCCTTGTTTCTGAGTTTAGCCTATATAAACATACTATATGTGCCCAGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
||
| CDS-3UTR TCA 90 bp | GTCATGAAAGCCATAAATCTGAGTACCTTTACTGCAGGCTTTAAACTAGACAGTAAGGACTCTTGTTTCTaGGGGGTTTTGTTTAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VMKAINLSTFTAGFKLDSKDSCF*GVLFKQ Trigger: CTGCTTAAACAAAACCCCTCAGAAACAAGAGTCCTT...ACTGTCTAGTTTAAAGCCTGCAGTAAAGGTACTCAGATTTATGGCTTTCATGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR TCA 90 bp | CATAATCAAAACGTCTTAACCAGAACACCAACAAGTATCAAAGCATTTGGTAAGTGTCCTTGGTTTGGCTaGAGGACTCTTGTTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: HNQNVLTRTPTSIKAFGKCPWFG*RTLVSE Trigger: CTCAGAAACAAGAGTCCTTCAGCCAAACCAAGGACA...CTTACCAAATGCTTTGATACTTGTTGGTGTTCTGGTTAAGACGTTTTGATTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
||
| CDS-3UTR GCA 90 bp | ATAGGAAATGAGGCAGGAATTGTCCAAGCTGACCAGATTATACAGGCCAATGCTAGTAAGAAACCCTTTTaGCACGGCAGTTATTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: IGNEAGIVQADQIIQANASKKPF*HGSYFI Trigger: AATAAAATAACTGCCGTGGCAAAAGGGTTTCTTACT...AGCATTGGCCTGTATAATCTGGTCAGCTTGGACAATTCCTGCCTCATTTCCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR GCA 90 bp | GACCTCTGGGCACATATAGTATGTTTATATAGGCTAAACTCAGAAACAAGGCAATCTTTGGGTTTTTCCTaGATATGCTCCCTTGTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: DLWAHIVCLYRLNSETRQSLGFS*ICSLVY Trigger: GTAGACAAGGGAGCATATGCAGGAAAAACCCAAAGA...TTGCCTTGTTTCTGAGTTTAGCCTATATAAACATACTATATGTGCCCAGAGGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208766.2 |
||
| CDS-3UTR CCA 90 bp | GTCATGAAAGCCATAAATCTGAGTACCTTTACTGCAGGCTTTAAACTAGACAGTTTTTCAAGAATCTCCTaGACACGAGTCAGTAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VMKAINLSTFTAGFKLDSFSRIS*TRVSKA Trigger: AGCCTTACTGACTCGTGTCCAGGAGATTCTTGAAAA...ACTGTCTAGTTTAAAGCCTGCAGTAAAGGTACTCAGATTTATGGCTTTCATGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 |
||
| CDS-3UTR CCA 90 bp | GTCATGAAAGCCATAAATCTGAGTACCTTTACTGCAGGCTTTAAACTAGACAGTGCTTGTGAAGCACCTTaGAGGAGAACATTTGACTTA | + |
|
Preference number: 4 (lower is better) Translates to: VMKAINLSTFTAGFKLDSACEAP*RRTFDL Trigger: TAAGTCAAATGTTCTCCTCCAAGGTGCTTCACAAGC...ACTGTCTAGTTTAAAGCCTGCAGTAAAGGTACTCAGATTTATGGCTTTCATGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CCA 90 bp | CTCTGGGCACATATAGTATGTTTATATAGGCTAAACTCAGAAACAAGGCAATTAGCAGTTCATGCAACTTaGGCACAGCCATACAAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LWAHIVCLYRLNSETRQLAVHAT*AQPYKY Trigger: GTACTTGTATGGCTGTGCCCAAGTTGCATGAACTGC...TAATTGCCTTGTTTCTGAGTTTAGCCTATATAAACATACTATATGTGCCCAGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CCA 90 bp | ACATTAATAGGAAATGAGGCAGGAATTGTCCAAGCTGACCAGATTATACAGGCCTTATTCTTGTTAATGTaGACGAATCCCTTGGGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: TLIGNEAGIVQADQIIQALFLLM*TNPLGY Trigger: ATACCCCAAGGGATTCGTCCACATTAACAAGAATAA...GGCCTGTATAATCTGGTCAGCTTGGACAATTCCTGCCTCATTTCCTATTAATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CCA 90 bp | AAAAGGGTGACTGTAGACCTCTGGGCACATATAGTATGTTTATATAGGCTAAACATTCTGTCCTTGGTTTaGCTGAAGGACTCTTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KRVTVDLWAHIVCLYRLNILSLV*LKDSCF Trigger: GAAACAAGAGTCCTTCAGCCAAACCAAGGACAGAAT...GTTTAGCCTATATAAACATACTATATGTGCCCAGAGGTCTACAGTCACCCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
||
| CDS-3UTR CCA 90 bp | GTCATGAAAGCCATAAATCTGAGTACCTTTACTGCAGGCTTTAAACTAGACAGTTTTGGCCGCTTTCTTTaGGTTTTTCCTGCATATGCT | + |
|
Preference number: 4 (lower is better) Translates to: VMKAINLSTFTAGFKLDSFGRFL*VFPAYA Trigger: AGCATATGCAGGAAAAACCCAAAGAAAGCGGCCAAA...ACTGTCTAGTTTAAAGCCTGCAGTAAAGGTACTCAGATTTATGGCTTTCATGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 |
||
| 3UTR CAA 72 bp | AATGTGAATTACTCAGTGCAAAGAGCACTTGCCTCCTaGCTTATAGACTCACAAGTGACAAATCATGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: NVNYSVQRALAS*LIDSQVTNHEM Trigger: CATCTCATGATTTGTCACTTGTGAGTCTATAAGCAAGGAGGCAAGTGCTCTTTGCACTGAGTAATTCACATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
||
| CDS-3UTR TCA 90 bp | TTGTTGGCTGATGTGTTTAGTGTTAGTCATGAAAGCCATAAATCTGAGTACCTTACGAAGAAGATGTCATaGATACCATACAGAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLADVFSVSHESHKSEYLTKKMS*IPYRAA Trigger: AGCTGCTCTGTATGGTATTCATGACATCTTCTTCGT...AAGGTACTCAGATTTATGGCTTTCATGACTAACACTAAACACATCAGCCAACAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR GCA 90 bp | GACCTCTGGGCACATATAGTATGTTTATATAGGCTAAACTCAGAAACAAGGCAACAAAAGCTAACATCTTaGTTTTCAGTAGTTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: DLWAHIVCLYRLNSETRQQKLTS*FSVVPG Trigger: GCCAGGAACTACTGAAAAGCAAGATGTTAGCTTTTG...TTGCCTTGTTTCTGAGTTTAGCCTATATAAACATACTATATGTGCCCAGAGGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CCA 90 bp | TTGTTGGCTGATGTGTTTAGTGTTAGTCATGAAAGCCATAAATCTGAGTACCTTTTTTCAAGAATCTCCTaGACACGAGTCAGTAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLADVFSVSHESHKSEYLFSRIS*TRVSKA Trigger: AGCCTTACTGACTCGTGTCCAGGAGATTCTTGAAAA...AAGGTACTCAGATTTATGGCTTTCATGACTAACACTAAACACATCAGCCAACAA 39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 |
||
| 3UTR CAA 72 bp | GAACACCAACAAGTATCAAAGCATTTGGTAAGAGTTTaGACTAAGCTCAAGACTGAATCGTCTTTCTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: EHQQVSKHLVRV*TKLKTESSFLP Trigger: TGGCAAGAAAGACGATTCAGTCTTGAGCTTAGTCAAAACTCTTACCAAATGCTTTGATACTTGTTGGTGTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
||
| CDS-3UTR TCA 90 bp | GACCTCTGGGCACATATAGTATGTTTATATAGGCTAAACTCAGAAACAAGGCAAATCGTTTTCTCTGTCTaGATGCGTTTCATTAACACT | + |
|
Preference number: 4 (lower is better) Translates to: DLWAHIVCLYRLNSETRQIVFSV*MRFINT Trigger: AGTGTTAATGAAACGCATTCAGACAGAGAAAACGAT...TTGCCTTGTTTCTGAGTTTAGCCTATATAAACATACTATATGTGCCCAGAGGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR TCA 90 bp | GTTCAAATCTACACAATCCCAATGTTACATGAGAAGCACAAAGCCCTTTTTGGATTGGAGGAGAACATTTaGCTTATTAAGGCTTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VQIYTIPMLHEKHKALFGLEENI*LIKAWF Trigger: AAACCAAGCCTTAATAAGTCAAATGTTCTCCTCCAA...TCCAAAAAGGGCTTTGTGCTTCTCATGTAACATTGGGATTGTGTAGATTTGAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR TCA 90 bp | CTCTGGGCACATATAGTATGTTTATATAGGCTAAACTCAGAAACAAGGCAATTAACGAAGAAGATGTCATaGATACCATACAGAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LWAHIVCLYRLNSETRQLTKKMS*IPYRAA Trigger: AGCTGCTCTGTATGGTATTCATGACATCTTCTTCGT...TAATTGCCTTGTTTCTGAGTTTAGCCTATATAAACATACTATATGTGCCCAGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
||
| CDS-3UTR GCA 90 bp | AAAAGGGTGACTGTAGACCTCTGGGCACATATAGTATGTTTATATAGGCTAAACGTAAATGGTTTCTGTTaGCCACTGATCAAAATCACT | + |
|
Preference number: 4 (lower is better) Translates to: KRVTVDLWAHIVCLYRLNVNGFC*PLIKIT Trigger: AGTGATTTTGATCAGTGGGCAACAGAAACCATTTAC...GTTTAGCCTATATAAACATACTATATGTGCCCAGAGGTCTACAGTCACCCTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 |
||
| CDS-3UTR GCA 90 bp | GTTCAAATCTACACAATCCCAATGTTACATGAGAAGCACAAAGCCCTTTTTGGAGTAAATGGTTTCTGTTaGCCACTGATCAAAATCACT | + |
|
Preference number: 4 (lower is better) Translates to: VQIYTIPMLHEKHKALFGVNGFC*PLIKIT Trigger: AGTGATTTTGATCAGTGGGCAACAGAAACCATTTAC...TCCAAAAAGGGCTTTGTGCTTCTCATGTAACATTGGGATTGTGTAGATTTGAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 |
||
| CDS-3UTR CCA 90 bp | AAAAGGGTGACTGTAGACCTCTGGGCACATATAGTATGTTTATATAGGCTAAACTTATTCTTGTTAATGTaGACGAATCCCTTGGGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: KRVTVDLWAHIVCLYRLNLFLLM*TNPLGY Trigger: ATACCCCAAGGGATTCGTCCACATTAACAAGAATAA...GTTTAGCCTATATAAACATACTATATGTGCCCAGAGGTCTACAGTCACCCTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CCA 90 bp | TTAGTGTTAGTCATGAAAGCCATAAATCTGAGTACCTTTACTGCAGGCTTTAAACAGGAACTTCTTATTTaGCATTCCCATCTCAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LVLVMKAINLSTFTAGFKQELLI*HSHLSN Trigger: GTTGCTGAGATGGGAATGCCAAATAAGAAGTTCCTG...TTTAAAGCCTGCAGTAAAGGTACTCAGATTTATGGCTTTCATGACTAACACTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CCA 90 bp | TTAGTGTTAGTCATGAAAGCCATAAATCTGAGTACCTTTACTGCAGGCTTTAAAATTCTGTCCTTGGTTTaGCTGAAGGACTCTTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LVLVMKAINLSTFTAGFKILSLV*LKDSCF Trigger: GAAACAAGAGTCCTTCAGCCAAACCAAGGACAGAAT...TTTAAAGCCTGCAGTAAAGGTACTCAGATTTATGGCTTTCATGACTAACACTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR TCA 90 bp | TTGTTGGCTGATGTGTTTAGTGTTAGTCATGAAAGCCATAAATCTGAGTACCTTTTGGAGGAGAACATTTaGCTTATTAAGGCTTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLADVFSVSHESHKSEYLLEENI*LIKAWF Trigger: AAACCAAGCCTTAATAAGTCAAATGTTCTCCTCCAA...AAGGTACTCAGATTTATGGCTTTCATGACTAACACTAAACACATCAGCCAACAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR TCA 90 bp | CTCTGGGCACATATAGTATGTTTATATAGGCTAAACTCAGAAACAAGGCAATTAAGCAGAAACATTACTTaGACAAACCCCTGTCAAATC | + |
|
Preference number: 4 (lower is better) Translates to: LWAHIVCLYRLNSETRQLSRNIT*TNPCQI Trigger: GATTTGACAGGGGTTTGTTCAAGTAATGTTTCTGCT...TAATTGCCTTGTTTCTGAGTTTAGCCTATATAAACATACTATATGTGCCCAGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR GCA 90 bp | GTCATGAAAGCCATAAATCTGAGTACCTTTACTGCAGGCTTTAAACTAGACAGTAGTAAGAAACCCTTTTaGCACGGCAGTTATTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: VMKAINLSTFTAGFKLDSSKKPF*HGSYFI Trigger: AATAAAATAACTGCCGTGGCAAAAGGGTTTCTTACT...ACTGTCTAGTTTAAAGCCTGCAGTAAAGGTACTCAGATTTATGGCTTTCATGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CCA 90 bp | CATAATCAAAACGTCTTAACCAGAACACCAACAAGTATCAAAGCATTTGGTAAGCTCACAGGCATTTACTaGGTTGTTTATAAGGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: HNQNVLTRTPTSIKAFGKLTGIY*VVYKDL Trigger: CAGATCCTTATAAACAACCCAGTAAATGCCTGTGAG...CTTACCAAATGCTTTGATACTTGTTGGTGTTCTGGTTAAGACGTTTTGATTATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
||
| CDS-3UTR CCA 90 bp | GTCATGAAAGCCATAAATCTGAGTACCTTTACTGCAGGCTTTAAACTAGACAGTTTTTGCGTGTATTTCTaGATTAAAAACCTGAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: VMKAINLSTFTAGFKLDSFCVYF*IKNLRP Trigger: TGGTCTCAGGTTTTTAATCCAGAAATACACGCAAAA...ACTGTCTAGTTTAAAGCCTGCAGTAAAGGTACTCAGATTTATGGCTTTCATGAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CCA 90 bp | CTCTGGGCACATATAGTATGTTTATATAGGCTAAACTCAGAAACAAGGCAATTAAATTGTCGCAACATTTaGCCGCTTTCTTTGGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LWAHIVCLYRLNSETRQLNCRNI*PLSLGF Trigger: AAAACCCAAAGAAAGCGGCCAAATGTTGCGACAATT...TAATTGCCTTGTTTCTGAGTTTAGCCTATATAAACATACTATATGTGCCCAGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000208766.2 |
||
| CDS-3UTR TCA 90 bp | CTCTGGGCACATATAGTATGTTTATATAGGCTAAACTCAGAAACAAGGCAATTAATCGTTTTCTCTGTCTaGATGCGTTTCATTAACACT | + |
|
Preference number: 4 (lower is better) Translates to: LWAHIVCLYRLNSETRQLIVFSV*MRFINT Trigger: AGTGTTAATGAAACGCATTCAGACAGAGAAAACGAT...TAATTGCCTTGTTTCTGAGTTTAGCCTATATAAACATACTATATGTGCCCAGAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| CDS CCA 90 bp | GGGCCCGTCCACAAGGCCTTGTTCCTGAGACTCTGGTCACGCCACTaGTCAGTGATCCCCAGAGGTAGAACGGTGCTTCACCTGCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GPVHKALFLRLWSRH*SVIPRGRTVLHLQS Trigger: GCTCTGCAGGTGAAGCACCGTTCTACCTCTGGGGATCACTGACCAGTGGCGTGACCAGAGTCTCAGGAACAAGGCCTTGTGGACGGGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CAA 90 bp | TCCAGGGCTAAGTCACAAGCCCCAACTAGAGTGGAATGTGGGTGGCGGCAGCCCCCTGCTGCCTCTGACTaGGCTTACCCACGACCATCT | + |
|
Preference number: 5 (lower is better) Translates to: SRAKSQAPTRVECGWRQPPAASD*AYPRPS Trigger: AGATGGTCGTGGGTAAGCCAAGTCAGAGGCAGCAGG...GGGCTGCCGCCACCCACATTCCACTCTAGTTGGGGCTTGTGACTTAGCCCTGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS TCA 90 bp | CCTGCTTTCTGGACTCTCACACTGCCTCAGAGAACCAGACACCTCTaGGTCTCCAGGCAGCCCCACCCGCTTAGGGGTTTGTTGGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: PAFWTLTLPQRTRHL*VSRQPHPLRGLLVL Trigger: GAGGACCAACAAACCCCTAAGCGGGTGGGGCTGCCTGGAGACTCAGAGGTGTCTGGTTCTCTGAGGCAGTGTGAGAGTCCAGAAAGCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 |
||
| CDS-3UTR CAA 90 bp | TGCTCAGCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTCACCCGTGCCCATGCTGCTaGCTTGTGAAGCACCTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: CSALAVPCLQKQSPGLSHPCPCC*LVKHLG Trigger: TCCAAGGTGCTTCACAAGCAAGCAGCATGGGCACGG...GTGACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CAA 90 bp | AGTCCAGGGCTAAGTCACAAGCCCCAACTAGAGTGGAATGTGGGTGGCGGCAGCCCAGGGACTTCTGTGTaGCCACTGAAAGCGCCACTC | + |
|
Preference number: 5 (lower is better) Translates to: SPGLSHKPQLEWNVGGGSPGTSV*PLKAPL Trigger: GAGTGGCGCTTTCAGTGGCAACACAGAAGTCCCTGG...GCTGCCGCCACCCACATTCCACTCTAGTTGGGGCTTGTGACTTAGCCCTGGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
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| CDS-3UTR CAA 90 bp | CCAATGCTCAGCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGCCAGGGACTTCTGTGTaGCCACTGAAAGCGCCACTC | + |
|
Preference number: 5 (lower is better) Translates to: PMLSPRCPLPAETESRAKPGTSV*PLKAPL Trigger: GAGTGGCGCTTTCAGTGGCAACACAGAAGTCCCTGG...CTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCATTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
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| CDS-3UTR CAA 90 bp | TGCTCAGCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTCACCCAGGGACTTCTGTGTaGCCACTGAAAGCGCCACTC | + |
|
Preference number: 5 (lower is better) Translates to: CSALAVPCLQKQSPGLSHPGTSV*PLKAPL Trigger: GAGTGGCGCTTTCAGTGGCAACACAGAAGTCCCTGG...GTGACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
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| CDS CCA 90 bp | TTTGTCAGGGATGGCAGAGCCACAGTGCCTGCCTATGGGCATGGGTaGGGCCTTCTCCTTTACACAGTCGCTCGCCTTAGCAGCATCGTT | + |
|
Preference number: 5 (lower is better) Translates to: FVRDGRATVPAYGHG*GLLLYTVARLSSIV Trigger: AACGATGCTGCTAAGGCGAGCGACTGTGTAAAGGAGAAGGCCCCACCCATGCCCATAGGCAGGCACTGTGGCTCTGCCATCCCTGACAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CAA 90 bp | CCAACTAGAGTGGAATGTGGGTGGCGGCAGCCCTGCTCCCTGCTTCATCCCAGTTGGTCTCCTGTGGGCTaGCTGAAGAAAGCCTTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PTRVECGWRQPCSLLHPSWSPVG*LKKALE Trigger: CTCTAAGGCTTTCTTCAGCAAGCCCACAGGAGACCA...ACTGGGATGAAGCAGGGAGCAGGGCTGCCGCCACCCACATTCCACTCTAGTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CAA 90 bp | AGTCCAGGGCTAAGTCACAAGCCCCAACTAGAGTGGAATGTGGGTGGCGGCAGCCCTCTTCTTTCCCCTTaGGGCTCAGCTCACAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SPGLSHKPQLEWNVGGGSPLLSP*GSAHRH Trigger: ATGCCTGTGAGCTGAGCCCAAAGGGGAAAGAAGAGG...GCTGCCGCCACCCACATTCCACTCTAGTTGGGGCTTGTGACTTAGCCCTGGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CAA 90 bp | ATGCTCAGCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTCACCTGCTGCCTCTGACTaGGCTTACCCACGACCATCT | + |
|
Preference number: 5 (lower is better) Translates to: MLSPRCPLPAETESRAKSPAASD*AYPRPS Trigger: AGATGGTCGTGGGTAAGCCAAGTCAGAGGCAGCAGG...TGACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CAA 90 bp | GCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTCACAAGCCCGGGTGCATTCTGTCCTaGGTTTGGCTGAAGGACTCT | + |
|
Preference number: 5 (lower is better) Translates to: ALAVPCLQKQSPGLSHKPGCILS*VWLKDS Trigger: AGAGTCCTTCAGCCAAACCAAGGACAGAATGCACCC...GGGCTTGTGACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
||
| CDS TCA 90 bp | GGTAAGCAGTGGAGAAAGTACAGCCACCCCATGGAAACGGATGAGTaGGACACTTTCTGCCTGAGCGGGCAGGAAGCTGCCTGTGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: GKQWRKYSHPMETDE*DTFCLSGQEAACGQ Trigger: CTGTCCACAGGCAGCTTCCTGCCCGCTCAGGCAGAAAGTGTCTCACTCATCCGTTTCCATGGGGTGGCTGTACTTTCTCCACTGCTTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 |
||
| CDS-3UTR CAA 90 bp | GTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTCACAAGCCCCAACTAGAGCCGTGCCCATGCTGCTaGCTTGTGAAGCACCTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: VPCLQKQSPGLSHKPQLEPCPCC*LVKHLG Trigger: TCCAAGGTGCTTCACAAGCAAGCAGCATGGGCACGG...CTCTAGTTGGGGCTTGTGACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CAA 90 bp | TGCTCAGCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTCACCACCCGCTTAGGGGTTaGTTGGTCCTCATTATTCAC | + |
|
Preference number: 5 (lower is better) Translates to: CSALAVPCLQKQSPGLSHHPLRG*LVLIIH Trigger: GTGAATAATGAGGACCAACAAACCCCTAAGCGGGTG...GTGACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 |
||
| CDS-3UTR CAA 90 bp | TCCAGGGCTAAGTCACAAGCCCCAACTAGAGTGGAATGTGGGTGGCGGCAGCCCTGCAGTTCATGCAACTaGGGCACAGCCATACAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: SRAKSQAPTRVECGWRQPCSSCN*GTAIQV Trigger: TACTTGTATGGCTGTGCCCAAGTTGCATGAACTGCA...GGGCTGCCGCCACCCACATTCCACTCTAGTTGGGGCTTGTGACTTAGCCCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CAA 90 bp | AGTCCAGGGCTAAGTCACAAGCCCCAACTAGAGTGGAATGTGGGTGGCGGCAGCAGCAGAATCGGTTCTTaGTCTCCACTCCAGTGCACT | + |
|
Preference number: 5 (lower is better) Translates to: SPGLSHKPQLEWNVGGGSSRIGS*SPLQCT Trigger: AGTGCACTGGAGTGGAGACAAAGAACCGATTCTGCT...GCTGCCGCCACCCACATTCCACTCTAGTTGGGGCTTGTGACTTAGCCCTGGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS GCA 90 bp | GGCTTGCTGAAGAAAGCCTTAGAGCAGCTCCATCTTCTGCCTGCCTaGTTTCTGGACTCTCACACTGCCTCAGAGAACCAGACACCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GLLKKALEQLHLLPA*FLDSHTASENQTPL Trigger: CAGAGGTGTCTGGTTCTCTGAGGCAGTGTGAGAGTCCAGAAAGCAGGCAGGCAGAAGATGGAGCTGCTCTAAGGCTTTCTTCAGCAAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS CCA 90 bp | TTTGACTTGACACACACTGACTGCTGGGCTGCAGTTCATGCAACTTaGGCACAGCCATACAAGTACCGTCCACCTTCTGGGCTCCCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: FDLTHTDCWAAVHAT*AQPYKYRPPSGLPC Trigger: ACAGGGGAGCCCAGAAGGTGGACGGTACTTGTATGGCTGTGCCCAAGTTGCATGAACTGCAGCCCAGCAGTCAGTGTGTGTCAAGTCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CAA 90 bp | CCAATGCTCAGCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTTATTAAGGCTTGGTTaGTCAGGGATGGCAGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PMLSPRCPLPAETESRAKLLRLG*SGMAEP Trigger: TGGCTCTGCCATCCCTGACAAACCAAGCCTTAATAA...CTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCATTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CAA 90 bp | GACTCCCTCCCACACACCTGCGTAGTCACTGTGGATTCTTCGGTCATGCGCAGTAGTTGCAGGAGTTCTTaGCTAGCAGACTGGCTGACT | + |
|
Preference number: 5 (lower is better) Translates to: DSLPHTCVVTVDSSVMRSSCRSS*LADWLT Trigger: AGTCAGCCAGTCTGCTAGCAAAGAACTCCTGCAACT...ACTGCGCATGACCGAAGAATCCACAGTGACTACGCAGGTGTGTGGGAGGGAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
||
| CDS-3UTR CAA 90 bp | CCAATGCTCAGCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGGATCATGATGGAGGATaGACATTCTCTCGGCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: PMLSPRCPLPAETESRAKDHDGG*TFSRLH Trigger: ATGCAGCCGAGAGAATGTCAATCCTCCATCATGATC...CTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCATTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
||
| CDS-3UTR CAA 90 bp | AGGAGAGCCGCACCTGTGTTTCTGGCAGGAGCCCAGACTCCTGCTTCACACTTGGATCATGATGGAGGATaGACATTCTCTCGGCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: RRAAPVFLAGAQTPASHLDHDGG*TFSRLH Trigger: ATGCAGCCGAGAGAATGTCAATCCTCCATCATGATC...CAAGTGTGAAGCAGGAGTCTGGGCTCCTGCCAGAAACACAGGTGCGGCTCTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
||
| CDS-3UTR CAA 90 bp | GCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTCACAAGCCCGCAGGAACTTCTTATTaGGCATTCCCATCTCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: ALAVPCLQKQSPGLSHKPAGTSY*AFPSQQ Trigger: TTGCTGAGATGGGAATGCCAAATAAGAAGTTCCTGC...GGGCTTGTGACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
||
| CDS-3UTR CAA 90 bp | GCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTCACAAGCCCCATTCTGTCCTTGGTTaGGCTGAAGGACTCTTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: ALAVPCLQKQSPGLSHKPHSVLG*AEGLLF Trigger: AAACAAGAGTCCTTCAGCCAAACCAAGGACAGAATG...GGGCTTGTGACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
||
| CDS-3UTR CAA 90 bp | CCAACTAGAGTGGAATGTGGGTGGCGGCAGCCCTGCTCCCTGCTTCATCCCAGTATTTGGCCGCTTTCTTaGGGTTTTTCCTGCATATGC | + |
|
Preference number: 5 (lower is better) Translates to: PTRVECGWRQPCSLLHPSIWPLS*GFSCIC Trigger: GCATATGCAGGAAAAACCCAAAGAAAGCGGCCAAAT...ACTGGGATGAAGCAGGGAGCAGGGCTGCCGCCACCCACATTCCACTCTAGTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 |
||
| CDS GCA 90 bp | TTTGACTTATTAAGGCTTGGTTTGTCAGGGATGGCAGAGCCACAGTaGCTGCCTATGGGCATGGGTGGGGCCTTCTCCTTTACACAGTCG | + |
|
Preference number: 5 (lower is better) Translates to: FDLLRLGLSGMAEPQ*LPMGMGGAFSFTQS Trigger: CGACTGTGTAAAGGAGAAGGCCCCACCCATGCCCATAGGCAGGCACTGTGGCTCTGCCATCCCTGACAAACCAAGCCTTAATAAGTCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CAA 90 bp | CAATGCTCAGCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTTTATTAAGGCTTGGTTaGTCAGGGATGGCAGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: QCSALAVPCLQKQSPGLSLLRLG*SGMAEP Trigger: TGGCTCTGCCATCCCTGACAAACCAAGCCTTAATAA...ACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CAA 90 bp | GAACGGGCTCCAGGAATTCATCGCTACACACCTGACACAGGCGCTCTGTTAGGCTTATTAAGGCTTGGTTaGTCAGGGATGGCAGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ERAPGIHRYTPDTGALLGLLRLG*SGMAEP Trigger: TGGCTCTGCCATCCCTGACAAACCAAGCCTTAATAA...GCCTAACAGAGCGCCTGTGTCAGGTGTGTAGCGATGAATTCCTGGAGCCCGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
||
| CDS-3UTR CAA 90 bp | GCTGCCACAGGCCGGACAGACCACATGAGGTATGCGATGACCATTTCTGATGACCTTCCAAGGTTTGACTaGACACACACTGACTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: AATGRTDHMRYAMTISDDLPRFD*THTDCW Trigger: CCAGCAGTCAGTGTGTGTCAAGTCAAACCTTGGAAG...GTCATCAGAAATGGTCATCGCATACCTCATGTGGTCTGTCCGGCCTGTGGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
||
| CDS-3UTR CAA 90 bp | CAATGCTCAGCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTGATCATGATGGAGGATaGACATTCTCTCGGCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: QCSALAVPCLQKQSPGLSDHDGG*TFSRLH Trigger: ATGCAGCCGAGAGAATGTCAATCCTCCATCATGATC...ACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
||
| CDS-3UTR CAA 90 bp | AGTCCAGGGCTAAGTCACAAGCCCCAACTAGAGTGGAATGTGGGTGGCGGCAGCTTGGCTGAAGGACTCTaGTTTCTGAGGGGTTTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: SPGLSHKPQLEWNVGGGSLAEGL*FLRGFV Trigger: AACAAAACCCCTCAGAAACAAGAGTCCTTCAGCCAA...GCTGCCGCCACCCACATTCCACTCTAGTTGGGGCTTGTGACTTAGCCCTGGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
||
| CDS-3UTR CAA 90 bp | AGTCCAGGGCTAAGTCACAAGCCCCAACTAGAGTGGAATGTGGGTGGCGGCAGCCATTCTGTCCTTGGTTaGGCTGAAGGACTCTTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SPGLSHKPQLEWNVGGGSHSVLG*AEGLLF Trigger: AAACAAGAGTCCTTCAGCCAAACCAAGGACAGAATG...GCTGCCGCCACCCACATTCCACTCTAGTTGGGGCTTGTGACTTAGCCCTGGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
||
| CDS-3UTR CAA 90 bp | GCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTCACAAGCCCAAATTGTCGCAACATTaGGCCGCTTTCTTTGGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: ALAVPCLQKQSPGLSHKPKLSQH*AAFFGF Trigger: AAACCCAAAGAAAGCGGCCAAATGTTGCGACAATTT...GGGCTTGTGACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000208766.2 |
||
| CDS-3UTR CAA 90 bp | TGCTCAGCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTCACTGCTGTCTTCTTAAATaGTCGCAACATTTGGCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: CSALAVPCLQKQSPGLSHCCLLK*SQHLAA Trigger: AGCGGCCAAATGTTGCGACAATTTAAGAAGACAGCA...GTGACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208766.2 |
||
| CDS TCA 90 bp | GTGCTTCACCTGCAGAGCCGAAGCTGTACTGCAGGGCAGAAGTTATaGAGCCAGAGTTGTTTGAAGTCTGGAGTGAGTCCACTTGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: VLHLQSRSCTAGQKL*SQSCLKSGVSPLGT Trigger: TGTCCCAAGTGGACTCACTCCAGACTTCAAACAACTCTGGCTTCATAACTTCTGCCCTGCAGTACAGCTTCGGCTCTGCAGGTGAAGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CAA 90 bp | GCAGGAATTGTCCAAGCTGACCAGATTATACAGGCCAATGCTCAGCCCTCGCTGCACCCGCTTAGGGGTTaGTTGGTCCTCATTATTCAC | + |
|
Preference number: 5 (lower is better) Translates to: AGIVQADQIIQANAQPSLHPLRG*LVLIIH Trigger: GTGAATAATGAGGACCAACAAACCCCTAAGCGGGTG...CAGCGAGGGCTGAGCATTGGCCTGTATAATCTGGTCAGCTTGGACAATTCCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 |
||
| CDS-3UTR CAA 90 bp | TCCAGGGCTAAGTCACAAGCCCCAACTAGAGTGGAATGTGGGTGGCGGCAGCCCTCTGGACTAGGTAATTaGGCATATGGACCTTTAAGA | + |
|
Preference number: 5 (lower is better) Translates to: SRAKSQAPTRVECGWRQPSGLGN*AYGPLR Trigger: TCTTAAAGGTCCATATGCCAAATTACCTAGTCCAGA...GGGCTGCCGCCACCCACATTCCACTCTAGTTGGGGCTTGTGACTTAGCCCTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CAA 90 bp | TCCAGGGCTAAGTCACAAGCCCCAACTAGAGTGGAATGTGGGTGGCGGCAGCCCCTCTCAGACGTGATTTaGGTAGCAGAAACATTACTT | + |
|
Preference number: 5 (lower is better) Translates to: SRAKSQAPTRVECGWRQPLSDVI*VAETLL Trigger: AAGTAATGTTTCTGCTACCAAAATCACGTCTGAGAG...GGGCTGCCGCCACCCACATTCCACTCTAGTTGGGGCTTGTGACTTAGCCCTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CAA 90 bp | GAAACAGAGTCCAGGGCTAAGTCACAAGCCCCAACTAGAGTGGAATGTGGGTGGCTTCCAAGGTTTGACTaGACACACACTGACTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ETESRAKSQAPTRVECGWLPRFD*THTDCW Trigger: CCAGCAGTCAGTGTGTGTCAAGTCAAACCTTGGAAG...CCACCCACATTCCACTCTAGTTGGGGCTTGTGACTTAGCCCTGGACTCTGTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CAA 90 bp | GCAGGAATTGTCCAAGCTGACCAGATTATACAGGCCAATGCTCAGCCCTCGCTGTATTTCCTTTTGCAGTaGCTCCTGCTCCCTCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: AGIVQADQIIQANAQPSLYFLLQ*LLLPLL Trigger: CAGGAGAGGGAGCAGGAGCAACTGCAAAAGGAAATA...CAGCGAGGGCTGAGCATTGGCCTGTATAATCTGGTCAGCTTGGACAATTCCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CAA 90 bp | CCAATGCTCAGCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGGGTGTCTTTTACAGTTaGTCGAAGCTGCTTCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: PMLSPRCPLPAETESRAKGVFYS*SKLLQF Trigger: AAACTGAAGCAGCTTCGACAAACTGTAAAAGACACC...CTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCATTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
||
| CDS CCA 90 bp | AGCAGCAGCTGGAGCGGTTCTATCCACTGCCTCTTCTTTCCCCTTTaGGCTCAGCTCACAGGCATTTACTGGGTTGTTTATAAGGATCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSSWSGSIHCLFFPL*AQLTGIYWVVYKDL Trigger: CAGATCCTTATAAACAACCCAGTAAATGCCTGTGAGCTGAGCCCAAAGGGGAAAGAAGAGGCAGTGGATAGAACCGCTCCAGCTGCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| CDS CCA 90 bp | TGCTCCTGCTCCCTCTCCTGCTCAGCTATGAGGAGTGACAACTGCTaGGCATGCTGTTCCTCTAGTCTCTTTCGCATTTCTTCAAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: CSCSLSCSAMRSDNC*ACCSSSLFRISSKA Trigger: AGCTTTTGAAGAAATGCGAAAGAGACTAGAGGAACAGCATGCCCAGCAGTTGTCACTCCTCATAGCTGAGCAGGAGAGGGAGCAGGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| CDS-3UTR CAA 90 bp | TGCTCAGCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTCACAGTAAATGGTTTCTGTaGCCCACTGATCAAAATCAC | + |
|
Preference number: 5 (lower is better) Translates to: CSALAVPCLQKQSPGLSHSKWFL*PTDQNH Trigger: GTGATTTTGATCAGTGGGCAACAGAAACCATTTACT...GTGACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 |
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| CDS-3UTR CAA 90 bp | GCTGCCACAGGCCGGACAGACCACATGAGGTATGCGATGACCATTTCTGATGACTTGGCTGAAGGACTCTaGTTTCTGAGGGGTTTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: AATGRTDHMRYAMTISDDLAEGL*FLRGFV Trigger: AACAAAACCCCTCAGAAACAAGAGTCCTTCAGCCAA...GTCATCAGAAATGGTCATCGCATACCTCATGTGGTCTGTCCGGCCTGTGGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
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| CDS-3UTR CAA 90 bp | GTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTCACAAGCCCCAACTAGAGCATTCTGTCCTTGGTTaGGCTGAAGGACTCTTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: VPCLQKQSPGLSHKPQLEHSVLG*AEGLLF Trigger: AAACAAGAGTCCTTCAGCCAAACCAAGGACAGAATG...CTCTAGTTGGGGCTTGTGACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
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| CDS GCA 90 bp | AGTTGCTCCTGCTCCCTCTCCTGCTCAGCTATGAGGAGTGACAACTaGTGGGCATGCTGTTCCTCTAGTCTCTTTCGCATTTCTTCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: SCSCSLSCSAMRSDN*WACCSSSLFRISSK Trigger: TTTTGAAGAAATGCGAAAGAGACTAGAGGAACAGCATGCCCAGCAGTTGTCACTCCTCATAGCTGAGCAGGAGAGGGAGCAGGAGCAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| CDS CCA 90 bp | CTAGCTAAGCCTGCCGTGCCCATGCTGCTTGCTTGTGAAGCACCTTaGAGGAGAACATTTGACTTATTAAGGCTTGGTTTGTCAGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: LAKPAVPMLLACEAP*RRTFDLLRLGLSGM Trigger: CATCCCTGACAAACCAAGCCTTAATAAGTCAAATGTTCTCCTCCAAGGTGCTTCACAAGCAAGCAGCATGGGCACGGCAGGCTTAGCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| CDS CCA 90 bp | GTTCACACACATCTTCCAAGGTTTGACTTGACACACACTGACTGCTaGGCTGCAGTTCATGCAACTTGGGCACAGCCATACAAGTACCGT | + |
|
Preference number: 5 (lower is better) Translates to: VHTHLPRFDLTHTDC*AAVHATWAQPYKYR Trigger: ACGGTACTTGTATGGCTGTGCCCAAGTTGCATGAACTGCAGCCCAGCAGTCAGTGTGTGTCAAGTCAAACCTTGGAAGATGTGTGTGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CAA 90 bp | ATGCTCAGCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTCATCTGGACTAGGTAATTaGGCATATGGACCTTTAAGA | + |
|
Preference number: 5 (lower is better) Translates to: MLSPRCPLPAETESRAKSSGLGN*AYGPLR Trigger: TCTTAAAGGTCCATATGCCAAATTACCTAGTCCAGA...TGACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CAA 90 bp | CAATGCTCAGCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTCTCTCAGACGTGATTTaGGTAGCAGAAACATTACTT | + |
|
Preference number: 5 (lower is better) Translates to: QCSALAVPCLQKQSPGLSLSDVI*VAETLL Trigger: AAGTAATGTTTCTGCTACCAAAATCACGTCTGAGAG...ACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CAA 90 bp | ATGCTCAGCCCTCGCTGTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTCATCTAGCATCTTATTCTaGTTAATGTGGACGAATCCC | + |
|
Preference number: 5 (lower is better) Translates to: MLSPRCPLPAETESRAKSSSILF*LMWTNP Trigger: GGGATTCGTCCACATTAACAAGAATAAGATGCTAGA...TGACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGACAGCGAGGGCTGAGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS TCA 90 bp | TTTGGGCTCAGCTCACAGGCATTTACTGGGTTGTTTATAAGGATCTaGCATGCTGATGCTGACCGAGAATGCCTCCGATGCATCGTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: FGLSSQAFTGLFIRI*HADADRECLRCIVG Trigger: TCCTACGATGCATCGGAGGCATTCTCGGTCAGCATCAGCATGTCAGATCCTTATAAACAACCCAGTAAATGCCTGTGAGCTGAGCCCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| CDS GCA 90 bp | CTCGTGGACTTTTCATCTTATCCATTTGCCGGAGCAGTTTCTCTTTaGGGGCTTCTCGATCATGATGGAGGATTGACATTCTCTCGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LVDFSSYPFAGAVSL*GLLDHDGGLTFSRL Trigger: CAGCCGAGAGAATGTCAATCCTCCATCATGATCGAGAAGCCCGCAAAGAGAAACTGCTCCGGCAAATGGATAAGATGAAAAGTCCACGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
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| CDS CCA 90 bp | AGCCAGAGTTGTTTGAAGTCTGGAGTGAGTCCACTTGGGACAGCATaGTTTCTAGCAAAGCAGAATCGGTTCTTTGTCTCCACTCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SQSCLKSGVSPLGTA*FLAKQNRFFVSTPV Trigger: CACTGGAGTGGAGACAAAGAACCGATTCTGCTTTGCTAGAAACCATGCTGTCCCAAGTGGACTCACTCCAGACTTCAAACAACTCTGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CAA 90 bp | GTCCCTTGCCTGCAGAAACAGAGTCCAGGGCTAAGTCACAAGCCCCAACTAGAGCTCTCAGACGTGATTTaGGTAGCAGAAACATTACTT | + |
|
Preference number: 5 (lower is better) Translates to: VPCLQKQSPGLSHKPQLELSDVI*VAETLL Trigger: AAGTAATGTTTCTGCTACCAAAATCACGTCTGAGAG...CTCTAGTTGGGGCTTGTGACTTAGCCCTGGACTCTGTTTCTGCAGGCAAGGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CAA 90 bp | GCTATCGTCTCTAAACTTGCCACCTTCCAGGATAGTGGGCACAATCTAGCCTATAGTTGCAGGAGTTCTTaGCTAGCAGACTGGCTGACT | + |
|
Preference number: 5 (lower is better) Translates to: AIVSKLATFQDSGHNLAYSCRSS*LADWLT Trigger: AGTCAGCCAGTCTGCTAGCAAAGAACTCCTGCAACT...ATAGGCTAGATTGTGCCCACTATCCTGGAAGGTGGCAAGTTTAGAGACGATAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CAA 90 bp | GCTATCGTCTCTAAACTTGCCACCTTCCAGGATAGTGGGCACAATCTAGCCTATAGCAGAATCGGTTCTTaGTCTCCACTCCAGTGCACT | + |
|
Preference number: 5 (lower is better) Translates to: AIVSKLATFQDSGHNLAYSRIGS*SPLQCT Trigger: AGTGCACTGGAGTGGAGACAAAGAACCGATTCTGCT...ATAGGCTAGATTGTGCCCACTATCCTGGAAGGTGGCAAGTTTAGAGACGATAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CAA 90 bp | TCATCTCCATCTCCTGTCCTATCCCATCAGTTCCTGCTCTACTCTGGTCCGTGGGGTGTCTTTTACAGTTaGTCGAAGCTGCTTCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SSPSPVLSHQFLLYSGPWGVFYS*SKLLQF Trigger: AAACTGAAGCAGCTTCGACAAACTGTAAAAGACACC...CCACGGACCAGAGTAGAGCAGGAACTGATGGGATAGGACAGGAGATGGAGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123178.8 |
||
| CDS-3UTR CAA 90 bp | GAAACAGAGTCCAGGGCTAAGTCACAAGCCCCAACTAGAGTGGAATGTGGGTGGGGTGTCTTTTACAGTTaGTCGAAGCTGCTTCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: ETESRAKSQAPTRVECGWGVFYS*SKLLQF Trigger: AAACTGAAGCAGCTTCGACAAACTGTAAAAGACACC...CCACCCACATTCCACTCTAGTTGGGGCTTGTGACTTAGCCCTGGACTCTGTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
||
| CDS-3UTR CAA 90 bp | GCAGGAATTGTCCAAGCTGACCAGATTATACAGGCCAATGCTCAGCCCTCGCTGAAATTGTCGCAACATTaGGCCGCTTTCTTTGGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: AGIVQADQIIQANAQPSLKLSQH*AAFFGF Trigger: AAACCCAAAGAAAGCGGCCAAATGTTGCGACAATTT...CAGCGAGGGCTGAGCATTGGCCTGTATAATCTGGTCAGCTTGGACAATTCCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000208766.2 |
||
| CDS TCA 90 bp | CCAAACATGATGGGTCCTGTTCTTCCTTTCCTAAGACATCAGAAATaGTGGTCTCCTGTGGGCTTGCTGAAGAAAGCCTTAGAGCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: PNMMGPVLPFLRHQK*WSPVGLLKKALEQL Trigger: GAGCTGCTCTAAGGCTTTCTTCAGCAAGCCCACAGGAGACCATCATTTCTGATGTCTTAGGAAAGGAAGAACAGGACCCATCATGTTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS TCA 90 bp | TTATCCATTTGCCGGAGCAGTTTCTCTTTGCGGGCTTCTCGATCATaGTGGAGGATTGACATTCTCTCGGCTGCATCCATTACGAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LSICRSSFSLRASRS*WRIDILSAASITKK Trigger: CTTCTTCGTAATGGATGCAGCCGAGAGAATGTCAATCCTCCATCATGATCGAGAAGCCCGCAAAGAGAAACTGCTCCGGCAAATGGATAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
||
| CDS TCA 90 bp | AACTTTCATGAACTTCTTCCTGTCCAGGGACTTCTGTGTTGCCACTaGAAGCGCCACTCGTGGACTTTTCATCTTATCCATTTGCCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: NFHELLPVQGLLCCH*KRHSWTFHLIHLPE Trigger: CTCCGGCAAATGGATAAGATGAAAAGTCCACGAGTGGCGCTTTCAGTGGCAACACAGAAGTCCCTGGACAGGAAGAAGTTCATGAAAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
||
| CDS-3UTR CAA 90 bp | GCTATCGTCTCTAAACTTGCCACCTTCCAGGATAGTGGGCACAATCTAGCCTATTGCAGTTCATGCAACTaGGGCACAGCCATACAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: AIVSKLATFQDSGHNLAYCSSCN*GTAIQV Trigger: TACTTGTATGGCTGTGCCCAAGTTGCATGAACTGCA...ATAGGCTAGATTGTGCCCACTATCCTGGAAGGTGGCAAGTTTAGAGACGATAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CAA 90 bp | GCAGGAATTGTCCAAGCTGACCAGATTATACAGGCCAATGCTCAGCCCTCGCTGTCTAGCATCTTATTCTaGTTAATGTGGACGAATCCC | + |
|
Preference number: 5 (lower is better) Translates to: AGIVQADQIIQANAQPSLSSILF*LMWTNP Trigger: GGGATTCGTCCACATTAACAAGAATAAGATGCTAGA...CAGCGAGGGCTGAGCATTGGCCTGTATAATCTGGTCAGCTTGGACAATTCCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CAA 90 bp | GAAACAGAGTCCAGGGCTAAGTCACAAGCCCCAACTAGAGTGGAATGTGGGTGGCGAAGCTGCTTCAGTTaGTCTGTTTGCATAAGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: ETESRAKSQAPTRVECGWRSCFS*SVCISL Trigger: TAAACTTATGCAAACAGACAAACTGAAGCAGCTTCG...CCACCCACATTCCACTCTAGTTGGGGCTTGTGACTTAGCCCTGGACTCTGTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
||
| CDS-3UTR CAA 90 bp | ATAGGAAATGAGGCAGGAATTGTCCAAGCTGACCAGATTATACAGGCCAATGCTGGGTGCATTCTGTCCTaGGTTTGGCTGAAGGACTCT | + |
|
Preference number: 5 (lower is better) Translates to: IGNEAGIVQADQIIQANAGCILS*VWLKDS Trigger: AGAGTCCTTCAGCCAAACCAAGGACAGAATGCACCC...AGCATTGGCCTGTATAATCTGGTCAGCTTGGACAATTCCTGCCTCATTTCCTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
||
| CDS GCA 90 bp | AAATCAAGTCTCCGCTTAACTTTCTCAAAACTGTTATCTACAAACTaGTCGTTTCCACGGAACACCGGCGGTGTGTCCATCTGCTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: KSSLRLTFSKLLSTN*SFPRNTGGVSICCL Trigger: CAGACAGCAGATGGACACACCGCCGGTGTTCCGTGGAAACGAGCAGTTTGTAGATAACAGTTTTGAGAAAGTTAAGCGGAGACTTGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CAA 90 bp | ATAGGAAATGAGGCAGGAATTGTCCAAGCTGACCAGATTATACAGGCCAATGCTTATTTCCTTTTGCAGTaGCTCCTGCTCCCTCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: IGNEAGIVQADQIIQANAYFLLQ*LLLPLL Trigger: CAGGAGAGGGAGCAGGAGCAACTGCAAAAGGAAATA...AGCATTGGCCTGTATAATCTGGTCAGCTTGGACAATTCCTGCCTCATTTCCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CAA 90 bp | ACATTAATAGGAAATGAGGCAGGAATTGTCCAAGCTGACCAGATTATACAGGCCGGGTGCATTCTGTCCTaGGTTTGGCTGAAGGACTCT | + |
|
Preference number: 5 (lower is better) Translates to: TLIGNEAGIVQADQIIQAGCILS*VWLKDS Trigger: AGAGTCCTTCAGCCAAACCAAGGACAGAATGCACCC...GGCCTGTATAATCTGGTCAGCTTGGACAATTCCTGCCTCATTTCCTATTAATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
||
| CDS-3UTR CAA 90 bp | AAAAGGGTGACTGTAGACCTCTGGGCACATATAGTATGTTTATATAGGCTAAACCCTCTTCTTTCCCCTTaGGGCTCAGCTCACAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: KRVTVDLWAHIVCLYRLNPLLSP*GSAHRH Trigger: ATGCCTGTGAGCTGAGCCCAAAGGGGAAAGAAGAGG...GTTTAGCCTATATAAACATACTATATGTGCCCAGAGGTCTACAGTCACCCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CAA 90 bp | ATAGGAAATGAGGCAGGAATTGTCCAAGCTGACCAGATTATACAGGCCAATGCTTGCAGTTCATGCAACTaGGGCACAGCCATACAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: IGNEAGIVQADQIIQANACSSCN*GTAIQV Trigger: TACTTGTATGGCTGTGCCCAAGTTGCATGAACTGCA...AGCATTGGCCTGTATAATCTGGTCAGCTTGGACAATTCCTGCCTCATTTCCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CAA 90 bp | TCTATAAAACAACTAGCTGTCTGCAGGAATGTGTGCTTCTACCCAAAACCAAGAGGGTGCATTCTGTCCTaGGTTTGGCTGAAGGACTCT | + |
|
Preference number: 5 (lower is better) Translates to: SIKQLAVCRNVCFYPKPRGCILS*VWLKDS Trigger: AGAGTCCTTCAGCCAAACCAAGGACAGAATGCACCC...TCTTGGTTTTGGGTAGAAGCACACATTCCTGCAGACAGCTAGTTGTTTTATAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CAA 90 bp | GCTATCGTCTCTAAACTTGCCACCTTCCAGGATAGTGGGCACAATCTAGCCTATTCTGGACTAGGTAATTaGGCATATGGACCTTTAAGA | + |
|
Preference number: 5 (lower is better) Translates to: AIVSKLATFQDSGHNLAYSGLGN*AYGPLR Trigger: TCTTAAAGGTCCATATGCCAAATTACCTAGTCCAGA...ATAGGCTAGATTGTGCCCACTATCCTGGAAGGTGGCAAGTTTAGAGACGATAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CAA 90 bp | TCTATAAAACAACTAGCTGTCTGCAGGAATGTGTGCTTCTACCCAAAACCAAGAAGCAGAATCGGTTCTTaGTCTCCACTCCAGTGCACT | + |
|
Preference number: 5 (lower is better) Translates to: SIKQLAVCRNVCFYPKPRSRIGS*SPLQCT Trigger: AGTGCACTGGAGTGGAGACAAAGAACCGATTCTGCT...TCTTGGTTTTGGGTAGAAGCACACATTCCTGCAGACAGCTAGTTGTTTTATAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CAA 90 bp | CTCTGGGCACATATAGTATGTTTATATAGGCTAAACTCAGAAACAAGGCAATTACCAGGGACTTCTGTGTaGCCACTGAAAGCGCCACTC | + |
|
Preference number: 5 (lower is better) Translates to: LWAHIVCLYRLNSETRQLPGTSV*PLKAPL Trigger: GAGTGGCGCTTTCAGTGGCAACACAGAAGTCCCTGG...TAATTGCCTTGTTTCTGAGTTTAGCCTATATAAACATACTATATGTGCCCAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
||
| CDS-3UTR CAA 90 bp | GTCATGAAAGCCATAAATCTGAGTACCTTTACTGCAGGCTTTAAACTAGACAGTAGTTGCAGGAGTTCTTaGCTAGCAGACTGGCTGACT | + |
|
Preference number: 5 (lower is better) Translates to: VMKAINLSTFTAGFKLDSSCRSS*LADWLT Trigger: AGTCAGCCAGTCTGCTAGCAAAGAACTCCTGCAACT...ACTGTCTAGTTTAAAGCCTGCAGTAAAGGTACTCAGATTTATGGCTTTCATGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CAA 90 bp | ACATTAATAGGAAATGAGGCAGGAATTGTCCAAGCTGACCAGATTATACAGGCCTTGGCTGAAGGACTCTaGTTTCTGAGGGGTTTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: TLIGNEAGIVQADQIIQALAEGL*FLRGFV Trigger: AACAAAACCCCTCAGAAACAAGAGTCCTTCAGCCAA...GGCCTGTATAATCTGGTCAGCTTGGACAATTCCTGCCTCATTTCCTATTAATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
||
| CDS-3UTR CAA 90 bp | ACATTAATAGGAAATGAGGCAGGAATTGTCCAAGCTGACCAGATTATACAGGCCCATTCTGTCCTTGGTTaGGCTGAAGGACTCTTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: TLIGNEAGIVQADQIIQAHSVLG*AEGLLF Trigger: AAACAAGAGTCCTTCAGCCAAACCAAGGACAGAATG...GGCCTGTATAATCTGGTCAGCTTGGACAATTCCTGCCTCATTTCCTATTAATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
||
| CDS GCA 90 bp | TTTACACAGTCGCTCGCCTTAGCAGCATCGTTTTCTCTGTCTGAATaGGTTTCATTAACACTTCTCTTTAAACTATTTCTCAGACTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: FTQSLALAASFSLSE*VSLTLLFKLFLRLR Trigger: CCGGAGTCTGAGAAATAGTTTAAAGAGAAGTGTTAATGAAACGCATTCAGACAGAGAAAACGATGCTGCTAAGGCGAGCGACTGTGTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CAA 90 bp | TCTATAAAACAACTAGCTGTCTGCAGGAATGTGTGCTTCTACCCAAAACCAAGATTGGCTGAAGGACTCTaGTTTCTGAGGGGTTTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: SIKQLAVCRNVCFYPKPRLAEGL*FLRGFV Trigger: AACAAAACCCCTCAGAAACAAGAGTCCTTCAGCCAA...TCTTGGTTTTGGGTAGAAGCACACATTCCTGCAGACAGCTAGTTGTTTTATAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CAA 90 bp | ACATTAATAGGAAATGAGGCAGGAATTGTCCAAGCTGACCAGATTATACAGGCCAGTAAATGGTTTCTGTaGCCCACTGATCAAAATCAC | + |
|
Preference number: 5 (lower is better) Translates to: TLIGNEAGIVQADQIIQASKWFL*PTDQNH Trigger: GTGATTTTGATCAGTGGGCAACAGAAACCATTTACT...GGCCTGTATAATCTGGTCAGCTTGGACAATTCCTGCCTCATTTCCTATTAATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 |
||
| CDS-3UTR CAA 90 bp | TTAGTGTTAGTCATGAAAGCCATAAATCTGAGTACCTTTACTGCAGGCTTTAAACTTCCAAGGTTTGACTaGACACACACTGACTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LVLVMKAINLSTFTAGFKLPRFD*THTDCW Trigger: CCAGCAGTCAGTGTGTGTCAAGTCAAACCTTGGAAG...TTTAAAGCCTGCAGTAAAGGTACTCAGATTTATGGCTTTCATGACTAACACTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CAA 90 bp | TTGTTGGCTGATGTGTTTAGTGTTAGTCATGAAAGCCATAAATCTGAGTACCTTGATCATGATGGAGGATaGACATTCTCTCGGCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: LLADVFSVSHESHKSEYLDHDGG*TFSRLH Trigger: ATGCAGCCGAGAGAATGTCAATCCTCCATCATGATC...AAGGTACTCAGATTTATGGCTTTCATGACTAACACTAAACACATCAGCCAACAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CAA 90 bp | GTTCAAATCTACACAATCCCAATGTTACATGAGAAGCACAAAGCCCTTTTTGGAGCAGGAACTTCTTATTaGGCATTCCCATCTCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: VQIYTIPMLHEKHKALFGAGTSY*AFPSQQ Trigger: TTGCTGAGATGGGAATGCCAAATAAGAAGTTCCTGC...TCCAAAAAGGGCTTTGTGCTTCTCATGTAACATTGGGATTGTGTAGATTTGAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CAA 90 bp | GACCTCTGGGCACATATAGTATGTTTATATAGGCTAAACTCAGAAACAAGGCAAGCAGGAACTTCTTATTaGGCATTCCCATCTCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: DLWAHIVCLYRLNSETRQAGTSY*AFPSQQ Trigger: TTGCTGAGATGGGAATGCCAAATAAGAAGTTCCTGC...TTGCCTTGTTTCTGAGTTTAGCCTATATAAACATACTATATGTGCCCAGAGGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
||
| CDS-3UTR CAA 90 bp | GACCTCTGGGCACATATAGTATGTTTATATAGGCTAAACTCAGAAACAAGGCAAATTTGGCCGCTTTCTTaGGGTTTTTCCTGCATATGC | + |
|
Preference number: 5 (lower is better) Translates to: DLWAHIVCLYRLNSETRQIWPLS*GFSCIC Trigger: GCATATGCAGGAAAAACCCAAAGAAAGCGGCCAAAT...TTGCCTTGTTTCTGAGTTTAGCCTATATAAACATACTATATGTGCCCAGAGGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000208766.2 |
||
| CDS-3UTR CAA 90 bp | AAAAGGGTGACTGTAGACCTCTGGGCACATATAGTATGTTTATATAGGCTAAACATTTGGCCGCTTTCTTaGGGTTTTTCCTGCATATGC | + |
|
Preference number: 5 (lower is better) Translates to: KRVTVDLWAHIVCLYRLNIWPLS*GFSCIC Trigger: GCATATGCAGGAAAAACCCAAAGAAAGCGGCCAAAT...GTTTAGCCTATATAAACATACTATATGTGCCCAGAGGTCTACAGTCACCCTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000208766.2 |
||
| CDS GCA 90 bp | AACATTCAAGTCTGTGACTTCTGGATTAGAGTAAATGGTTTCTGTTaGCCACTGATCAAAATCACTGGCATTTGGTGCTTTTCTAACCTG | + |
|
Preference number: 5 (lower is better) Translates to: NIQVCDFWIRVNGFC*PLIKITGIWCFSNL Trigger: CAGGTTAGAAAAGCACCAAATGCCAGTGATTTTGATCAGTGGGCAACAGAAACCATTTACTCTAATCCAGAAGTCACAGACTTGAATGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 |
||
| CDS GCA 90 bp | ATGGTGTCTTTTACAGTTTGTCGAAGCTGCTTCAGTTTGTCTGTTTaGATAAGTTTACGAGTAAGAAACCCTTTTGCCACGGCAGTTATT | + |
|
Preference number: 5 (lower is better) Translates to: MVSFTVCRSCFSLSV*ISLRVRNPFATAVI Trigger: AATAACTGCCGTGGCAAAAGGGTTTCTTACTCGTAAACTTATGCAAACAGACAAACTGAAGCAGCTTCGACAAACTGTAAAAGACACCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS CCA 90 bp | CAAGCTGTTTGGAACTCTAACAGGAACATTCAAGTCTGTGACTTCTaGATTAGAGTAAATGGTTTCTGTTGCCCACTGATCAAAATCACT | + |
|
Preference number: 5 (lower is better) Translates to: QAVWNSNRNIQVCDF*IRVNGFCCPLIKIT Trigger: AGTGATTTTGATCAGTGGGCAACAGAAACCATTTACTCTAATCCAGAAGTCACAGACTTGAATGTTCCTGTTAGAGTTCCAAACAGCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 |
||
| CDS-3UTR CAA 90 bp | GTCATGAAAGCCATAAATCTGAGTACCTTTACTGCAGGCTTTAAACTAGACAGTCGAAGCTGCTTCAGTTaGTCTGTTTGCATAAGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: VMKAINLSTFTAGFKLDSRSCFS*SVCISL Trigger: TAAACTTATGCAAACAGACAAACTGAAGCAGCTTCG...ACTGTCTAGTTTAAAGCCTGCAGTAAAGGTACTCAGATTTATGGCTTTCATGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CAA 90 bp | TTGTTGGCTGATGTGTTTAGTGTTAGTCATGAAAGCCATAAATCTGAGTACCTTGGTGTCTTTTACAGTTaGTCGAAGCTGCTTCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LLADVFSVSHESHKSEYLGVFYS*SKLLQF Trigger: AAACTGAAGCAGCTTCGACAAACTGTAAAAGACACC...AAGGTACTCAGATTTATGGCTTTCATGACTAACACTAAACACATCAGCCAACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CAA 90 bp | CTCTGGGCACATATAGTATGTTTATATAGGCTAAACTCAGAAACAAGGCAATTAGCAGGAACTTCTTATTaGGCATTCCCATCTCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: LWAHIVCLYRLNSETRQLAGTSY*AFPSQQ Trigger: TTGCTGAGATGGGAATGCCAAATAAGAAGTTCCTGC...TAATTGCCTTGTTTCTGAGTTTAGCCTATATAAACATACTATATGTGCCCAGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
||
| CDS-3UTR CAA 90 bp | TTGTTGGCTGATGTGTTTAGTGTTAGTCATGAAAGCCATAAATCTGAGTACCTTTCTAGCATCTTATTCTaGTTAATGTGGACGAATCCC | + |
|
Preference number: 5 (lower is better) Translates to: LLADVFSVSHESHKSEYLSSILF*LMWTNP Trigger: GGGATTCGTCCACATTAACAAGAATAAGATGCTAGA...AAGGTACTCAGATTTATGGCTTTCATGACTAACACTAAACACATCAGCCAACAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS-3UTR CAA 90 bp | TTAGTGTTAGTCATGAAAGCCATAAATCTGAGTACCTTTACTGCAGGCTTTAAACGAAGCTGCTTCAGTTaGTCTGTTTGCATAAGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: LVLVMKAINLSTFTAGFKRSCFS*SVCISL Trigger: TAAACTTATGCAAACAGACAAACTGAAGCAGCTTCG...TTTAAAGCCTGCAGTAAAGGTACTCAGATTTATGGCTTTCATGACTAACACTAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS CCA 72 bp | CAGGGATGGCAGAGCCACAGTGCCTGCCTATGGGCATaGGTGGGGCCTTCTCCTTTACACAGTCGCTCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: QGWQSHSACLWA*VGPSPLHSRSP Trigger: AGGCGAGCGACTGTGTAAAGGAGAAGGCCCCACCCATGCCCATAGGCAGGCACTGTGGCTCTGCCATCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS TCA 72 bp | GCGGGCAGGAAGCTGCCTGTGGACAGCGATGCTTCCTaGGCTCGGCCAAGTGCTTTCTCGCAGAACTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: AGRKLPVDSDAS*ARPSAFSQNSS Trigger: TGAGGAGTTCTGCGAGAAAGCACTTGGCCGAGCTCAGGAAGCATCGCTGTCCACAGGCAGCTTCCTGCCCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 |
||
| CDS GCA 72 bp | TGCCTGAGCGGGCAGGAAGCTGCCTGTGGACAGCGATaGTTCCTGAGCTCGGCCAAGTGCTTTCTCGCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: CLSGQEAACGQR*FLSSAKCFLAE Trigger: TTCTGCGAGAAAGCACTTGGCCGAGCTCAGGAAGCATCGCTGTCCACAGGCAGCTTCCTGCCCGCTCAGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 |
||
| CDS CCA 72 bp | GATGGCAGAGCCACAGTGCCTGCCTATGGGCATGGGTaGGGCCTTCTCCTTTACACAGTCGCTCGCCTTAGC | + |
|
Preference number: 6 (lower is better) Translates to: DGRATVPAYGHG*GLLLYTVARLS Trigger: GCTAAGGCGAGCGACTGTGTAAAGGAGAAGGCCCCACCCATGCCCATAGGCAGGCACTGTGGCTCTGCCATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS TCA 72 bp | TGGACTCTCACACTGCCTCAGAGAACCAGACACCTCTaGGTCTCCAGGCAGCCCCACCCGCTTAGGGGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: WTLTLPQRTRHL*VSRQPHPLRGL Trigger: CAAACCCCTAAGCGGGTGGGGCTGCCTGGAGACTCAGAGGTGTCTGGTTCTCTGAGGCAGTGTGAGAGTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 |
||
| CDS GCA 72 bp | GGCTTGGTTTGTCAGGGATGGCAGAGCCACAGTGCCTaGCTATGGGCATGGGTGGGGCCTTCTCCTTTACAC | + |
|
Preference number: 6 (lower is better) Translates to: GLVCQGWQSHSA*LWAWVGPSPLH Trigger: GTGTAAAGGAGAAGGCCCCACCCATGCCCATAGGCAGGCACTGTGGCTCTGCCATCCCTGACAAACCAAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS CCA 72 bp | GTTTGTCAGGGATGGCAGAGCCACAGTGCCTGCCTATaGGCATGGGTGGGGCCTTCTCCTTTACACAGTCGC | + |
|
Preference number: 6 (lower is better) Translates to: VCQGWQSHSACL*AWVGPSPLHSR Trigger: GCGACTGTGTAAAGGAGAAGGCCCCACCCATGCCCATAGGCAGGCACTGTGGCTCTGCCATCCCTGACAAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
||
| CDS CCA 72 bp | CTTGGGCCCGTCCACAAGGCCTTGTTCCTGAGACTCTaGTCACGCCACTGGTCAGTGATCCCCAGAGGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: LGPVHKALFLRL*SRHWSVIPRGR Trigger: TCTACCTCTGGGGATCACTGACCAGTGGCGTGACCAGAGTCTCAGGAACAAGGCCTTGTGGACGGGCCCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| CDS TCA 72 bp | ACCCCATGGAAACGGATGAGTGAGACACTTTCTGCCTaGGCGGGCAGGAAGCTGCCTGTGGACAGCGATGCT | + |
|
Preference number: 6 (lower is better) Translates to: TPWKRMSETLSA*AGRKLPVDSDA Trigger: AGCATCGCTGTCCACAGGCAGCTTCCTGCCCGCTCAGGCAGAAAGTGTCTCACTCATCCGTTTCCATGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 |
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| CDS TCA 72 bp | GCAGTGGAGAAAGTACAGCCACCCCATGGAAACGGATaGGTGAGACACTTTCTGCCTGAGCGGGCAGGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: AVEKVQPPHGNG*VRHFLPERAGS Trigger: GCTTCCTGCCCGCTCAGGCAGAAAGTGTCTCACTCATCCGTTTCCATGGGGTGGCTGTACTTTCTCCACTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 |
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| CDS GCA 72 bp | TTAAGGCTTGGTTTGTCAGGGATGGCAGAGCCACAGTaGCTGCCTATGGGCATGGGTGGGGCCTTCTCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: LRLGLSGMAEPQ*LPMGMGGAFSF Trigger: AAAGGAGAAGGCCCCACCCATGCCCATAGGCAGGCACTGTGGCTCTGCCATCCCTGACAAACCAAGCCTTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| CDS GCA 72 bp | TGTTGTCTCAGCAGCAGCTGGAGCGGTTCTATCCACTaGCTCTTCTTTCCCCTTTGGGCTCAGCTCACAGGC | + |
|
Preference number: 6 (lower is better) Translates to: CCLSSSWSGSIH*LFFPLWAQLTG Trigger: GCCTGTGAGCTGAGCCCAAAGGGGAAAGAAGAGGCAGTGGATAGAACCGCTCCAGCTGCTGCTGAGACAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| CDS CCA 72 bp | CACAAGGCCTTGTTCCTGAGACTCTGGTCACGCCACTaGTCAGTGATCCCCAGAGGTAGAACGGTGCTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: HKALFLRLWSRH*SVIPRGRTVLH Trigger: GTGAAGCACCGTTCTACCTCTGGGGATCACTGACCAGTGGCGTGACCAGAGTCTCAGGAACAAGGCCTTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| CDS GCA 72 bp | TGCTCGTTTCCACGGAACACCGGCGGTGTGTCCATCTaGTGTCTGGAAGTCTGGGTTTGCGTAAGTAAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: CSFPRNTGGVSI*CLEVWVCVSKG Trigger: TCCCTTACTTACGCAAACCCAGACTTCCAGACAGCAGATGGACACACCGCCGGTGTTCCGTGGAAACGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| CDS CCA 72 bp | AACTTGGGCACAGCCATACAAGTACCGTCCACCTTCTaGGCTCCCCTGTCATCAGCTATGAAGGGACCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: NLGTAIQVPSTF*APLSSAMKGPS Trigger: GGAAGGTCCCTTCATAGCTGATGACAGGGGAGCCCAGAAGGTGGACGGTACTTGTATGGCTGTGCCCAAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| CDS CCA 72 bp | AACACCGGCGGTGTGTCCATCTGCTGTCTGGAAGTCTaGGTTTGCGTAAGTAAGGGAGATGGGTGTTTCACA | + |
|
Preference number: 6 (lower is better) Translates to: NTGGVSICCLEV*VCVSKGDGCFT Trigger: TGTGAAACACCCATCTCCCTTACTTACGCAAACCCAGACTTCCAGACAGCAGATGGACACACCGCCGGTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| CDS CAA 90 bp | TGTGAAGCACCTTGGAGGAGAACATTTGACTTATTAAGGCTTGGTTaGTCAGGGATGGCAGAGCCACAGTGCCTGCCTATGGGCATGGGT | + |
|
Preference number: 6 (lower is better) Translates to: CEAPWRRTFDLLRLG*SGMAEPQCLPMGMG Trigger: ACCCATGCCCATAGGCAGGCACTGTGGCTCTGCCATCCCTGACAAACCAAGCCTTAATAAGTCAAATGTTCTCCTCCAAGGTGCTTCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| CDS CAA 90 bp | GCAGAGCCGAAGCTGTACTGCAGGGCAGAAGTTATGAAGCCAGAGTaGTTTGAAGTCTGGAGTGAGTCCACTTGGGACAGCATGGTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: AEPKLYCRAEVMKPE*FEVWSESTWDSMVS Trigger: AGAAACCATGCTGTCCCAAGTGGACTCACTCCAGACTTCAAACAACTCTGGCTTCATAACTTCTGCCCTGCAGTACAGCTTCGGCTCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| CDS CCA 72 bp | CATCTTCCAAGGTTTGACTTGACACACACTGACTGCTaGGCTGCAGTTCATGCAACTTGGGCACAGCCATAC | + |
|
Preference number: 6 (lower is better) Translates to: HLPRFDLTHTDC*AAVHATWAQPY Trigger: GTATGGCTGTGCCCAAGTTGCATGAACTGCAGCCCAGCAGTCAGTGTGTGTCAAGTCAAACCTTGGAAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| CDS CCA 72 bp | TCCCTCTCCTGCTCAGCTATGAGGAGTGACAACTGCTaGGCATGCTGTTCCTCTAGTCTCTTTCGCATTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SLSCSAMRSDNC*ACCSSSLFRIS Trigger: AGAAATGCGAAAGAGACTAGAGGAACAGCATGCCCAGCAGTTGTCACTCCTCATAGCTGAGCAGGAGAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| CDS CAA 90 bp | CCCCTGTCAAATCAGTCGGTGATTTTGGCACAGTTTCAGACTCATTaGTTGTCTCAGCAGCAGCTGGAGCGGTTCTATCCACTGCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: PLSNQSVILAQFQTH*LSQQQLERFYPLPL Trigger: AAGAGGCAGTGGATAGAACCGCTCCAGCTGCTGCTGAGACAACAAATGAGTCTGAAACTGTGCCAAAATCACCGACTGATTTGACAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| CDS CAA 90 bp | GGGCTAGTTTCTAGCATCTTATTCTTGTTAATGTGGACGAATCCCTaGGGGTATCTTCTTTCCAGCAGACGGTCCCGCTCCTGCTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: GLVSSILFLLMWTNP*GYLLSSRRSRSCSA Trigger: AGCTGAGCAGGAGCGGGACCGTCTGCTGGAAAGAAGATACCCCAAGGGATTCGTCCACATTAACAAGAATAAGATGCTAGAAACTAGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| CDS CCA 72 bp | CCTGCCGTGCCCATGCTGCTTGCTTGTGAAGCACCTTaGAGGAGAACATTTGACTTATTAAGGCTTGGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: PAVPMLLACEAP*RRTFDLLRLGL Trigger: CAAACCAAGCCTTAATAAGTCAAATGTTCTCCTCCAAGGTGCTTCACAAGCAAGCAGCATGGGCACGGCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| CDS CCA 72 bp | CACAGTTTCAGACTCATTTGTTGTCTCAGCAGCAGCTaGAGCGGTTCTATCCACTGCCTCTTCTTTCCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: HSFRLICCLSSS*SGSIHCLFFPL Trigger: AAGGGGAAAGAAGAGGCAGTGGATAGAACCGCTCCAGCTGCTGCTGAGACAACAAATGAGTCTGAAACTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| CDS CAA 72 bp | CCTTGGAGGAGAACATTTGACTTATTAAGGCTTGGTTaGTCAGGGATGGCAGAGCCACAGTGCCTGCCTATG | + |
|
Preference number: 6 (lower is better) Translates to: PWRRTFDLLRLG*SGMAEPQCLPM Trigger: CATAGGCAGGCACTGTGGCTCTGCCATCCCTGACAAACCAAGCCTTAATAAGTCAAATGTTCTCCTCCAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| CDS CAA 72 bp | CAGTCGGTGATTTTGGCACAGTTTCAGACTCATTTGTaGTCTCAGCAGCAGCTGGAGCGGTTCTATCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: QSVILAQFQTHL*SQQQLERFYPL Trigger: CAGTGGATAGAACCGCTCCAGCTGCTGCTGAGACAACAAATGAGTCTGAAACTGTGCCAAAATCACCGACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| CDS CAA 72 bp | AAGCTGTACTGCAGGGCAGAAGTTATGAAGCCAGAGTaGTTTGAAGTCTGGAGTGAGTCCACTTGGGACAGC | + |
|
Preference number: 6 (lower is better) Translates to: KLYCRAEVMKPE*FEVWSESTWDS Trigger: GCTGTCCCAAGTGGACTCACTCCAGACTTCAAACAACTCTGGCTTCATAACTTCTGCCCTGCAGTACAGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| CDS TCA 72 bp | AGCTCACAGGCATTTACTGGGTTGTTTATAAGGATCTaGCATGCTGATGCTGACCGAGAATGCCTCCGATGC | + |
|
Preference number: 6 (lower is better) Translates to: SSQAFTGLFIRI*HADADRECLRC Trigger: GCATCGGAGGCATTCTCGGTCAGCATCAGCATGTCAGATCCTTATAAACAACCCAGTAAATGCCTGTGAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| CDS TCA 72 bp | GAACTTCTTCCTGTCCAGGGACTTCTGTGTTGCCACTaGAAGCGCCACTCGTGGACTTTTCATCTTATCCAT | + |
|
Preference number: 6 (lower is better) Translates to: ELLPVQGLLCCH*KRHSWTFHLIH Trigger: ATGGATAAGATGAAAAGTCCACGAGTGGCGCTTTCAGTGGCAACACAGAAGTCCCTGGACAGGAAGAAGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
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| CDS GCA 72 bp | CTCCGCTTAACTTTCTCAAAACTGTTATCTACAAACTaGTCGTTTCCACGGAACACCGGCGGTGTGTCCATC | + |
|
Preference number: 6 (lower is better) Translates to: LRLTFSKLLSTN*SFPRNTGGVSI Trigger: GATGGACACACCGCCGGTGTTCCGTGGAAACGAGCAGTTTGTAGATAACAGTTTTGAGAAAGTTAAGCGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| CDS CAA 72 bp | TCTAGCATCTTATTCTTGTTAATGTGGACGAATCCCTaGGGGTATCTTCTTTCCAGCAGACGGTCCCGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSILFLLMWTNP*GYLLSSRRSRS Trigger: GGAGCGGGACCGTCTGCTGGAAAGAAGATACCCCAAGGGATTCGTCCACATTAACAAGAATAAGATGCTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| CDS GCA 72 bp | TGGACACGAGTCAGTAAGGCTTTCTTCCTGTTGGCCTaGTTTCTTGACTGCACATCAAGTGCTTTCTGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: WTRVSKAFFLLA*FLDCTSSAFCF Trigger: AAAGCAGAAAGCACTTGATGTGCAGTCAAGAAAGCAGGCCAACAGGAAGAAAGCCTTACTGACTCGTGTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 |
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| CDS GCA 72 bp | TCCTGCTCAGCTATGAGGAGTGACAACTGCTGGGCATaGTGTTCCTCTAGTCTCTTTCGCATTTCTTCAAAA | + |
|
Preference number: 6 (lower is better) Translates to: SCSAMRSDNCWA*CSSSLFRISSK Trigger: TTTTGAAGAAATGCGAAAGAGACTAGAGGAACAGCATGCCCAGCAGTTGTCACTCCTCATAGCTGAGCAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| CDS CCA 72 bp | TGTTTGAAGTCTGGAGTGAGTCCACTTGGGACAGCATaGTTTCTAGCAAAGCAGAATCGGTTCTTTGTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: CLKSGVSPLGTA*FLAKQNRFFVS Trigger: GGAGACAAAGAACCGATTCTGCTTTGCTAGAAACCATGCTGTCCCAAGTGGACTCACTCCAGACTTCAAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| CDS CCA 72 bp | AAGCCAGAGTTGTTTGAAGTCTGGAGTGAGTCCACTTaGGACAGCATGGTTTCTAGCAAAGCAGAATCGGTT | + |
|
Preference number: 6 (lower is better) Translates to: KPELFEVWSEST*DSMVSSKAESV Trigger: AACCGATTCTGCTTTGCTAGAAACCATGCTGTCCCAAGTGGACTCACTCCAGACTTCAAACAACTCTGGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| CDS CAA 72 bp | AATCAGTCGGTGATTTTGGCACAGTTTCAGACTCATTaGTTGTCTCAGCAGCAGCTGGAGCGGTTCTATCCA | + |
|
Preference number: 6 (lower is better) Translates to: NQSVILAQFQTH*LSQQQLERFYP Trigger: TGGATAGAACCGCTCCAGCTGCTGCTGAGACAACAAATGAGTCTGAAACTGTGCCAAAATCACCGACTGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| CDS CAA 72 bp | CCCACGACCATCTCTCTTGTGCTCTCAGACGTGATTTaGGTAGCAGAAACATTACTTGAACAAACCCCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: PTTISLVLSDVI*VAETLLEQTPV Trigger: GACAGGGGTTTGTTCAAGTAATGTTTCTGCTACCAAAATCACGTCTGAGAGCACAAGAGAGATGGTCGTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| CDS CAA 72 bp | GTTTCTCTTTGCGGGCTTCTCGATCATGATGGAGGATaGACATTCTCTCGGCTGCATCCATTACGAAGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: VSLCGLLDHDGG*TFSRLHPLRRR Trigger: TCTTCTTCGTAATGGATGCAGCCGAGAGAATGTCAATCCTCCATCATGATCGAGAAGCCCGCAAAGAGAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
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| CDS TCA 72 bp | TTTCTCTTTGCGGGCTTCTCGATCATGATGGAGGATTaGCATTCTCTCGGCTGCATCCATTACGAAGAAGAT | + |
|
Preference number: 6 (lower is better) Translates to: FLFAGFSIMMED*HSLGCIHYEED Trigger: ATCTTCTTCGTAATGGATGCAGCCGAGAGAATGTCAATCCTCCATCATGATCGAGAAGCCCGCAAAGAGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 ENSMUST00000208766.2 |
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| CDS CAA 72 bp | GAGTCAGTAAGGCTTTCTTCCTGTTGGCCTGCTTTCTaGACTGCACATCAAGTGCTTTCTGCTTTTCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: ESVRLSSCWPAF*TAHQVLSAFPL Trigger: AAGAGGAAAAGCAGAAAGCACTTGATGTGCAGTCAAGAAAGCAGGCCAACAGGAAGAAAGCCTTACTGACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 |
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| CDS CCA 72 bp | CTCTTGAATTTTCTTTCTCTTCTCAATGGTAAGCAGTaGAGAAAGTACAGCCACCCCATGGAAACGGATGAG | + |
|
Preference number: 6 (lower is better) Translates to: LLNFLSLLNGKQ*RKYSHPMETDE Trigger: CTCATCCGTTTCCATGGGGTGGCTGTACTTTCTCCACTGCTTACCATTGAGAAGAGAAAGAAAATTCAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 |
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| CDS CAA 72 bp | TACTTGAACAAACCCCTGTCAAATCAGTCGGTGATTTaGGCACAGTTTCAGACTCATTTGTTGTCTCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: YLNKPLSNQSVI*AQFQTHLLSQQ Trigger: CTGCTGAGACAACAAATGAGTCTGAAACTGTGCCAAAATCACCGACTGATTTGACAGGGGTTTGTTCAAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| CDS GCA 72 bp | GTCTGTGACTTCTGGATTAGAGTAAATGGTTTCTGTTaGCCACTGATCAAAATCACTGGCATTTGGTGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: VCDFWIRVNGFC*PLIKITGIWCF Trigger: AAAGCACCAAATGCCAGTGATTTTGATCAGTGGGCAACAGAAACCATTTACTCTAATCCAGAAGTCACAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 |
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| CDS CAA 90 bp | CATGGTGTCTTTTACAGTTTGTCGAAGCTGCTTCAGTTTGTCTGTTaGCATAAGTTTACGAGTAAGAAACCCTTTTGCCACGGCAGTTAT | + |
|
Preference number: 6 (lower is better) Translates to: HGVFYSLSKLLQFVC*HKFTSKKPFCHGSY Trigger: ATAACTGCCGTGGCAAAAGGGTTTCTTACTCGTAAACTTATGCAAACAGACAAACTGAAGCAGCTTCGACAAACTGTAAAAGACACCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| CDS CAA 90 bp | ATGAATTCCATGGTGTCTTTTACAGTTTGTCGAAGCTGCTTCAGTTaGTCTGTTTGCATAAGTTTACGAGTAAGAAACCCTTTTGCCACG | + |
|
Preference number: 6 (lower is better) Translates to: MNSMVSFTVCRSCFS*SVCISLRVRNPFAT Trigger: CGTGGCAAAAGGGTTTCTTACTCGTAAACTTATGCAAACAGACAAACTGAAGCAGCTTCGACAAACTGTAAAAGACACCATGGAATTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| CDS GCA 72 bp | TCGCTCGCCTTAGCAGCATCGTTTTCTCTGTCTGAATaGGTTTCATTAACACTTCTCTTTAAACTATTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: SLALAASFSLSE*VSLTLLFKLFL Trigger: GAGAAATAGTTTAAAGAGAAGTGTTAATGAAACGCATTCAGACAGAGAAAACGATGCTGCTAAGGCGAGCGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| CDS GCA 72 bp | TTTACAGTTTGTCGAAGCTGCTTCAGTTTGTCTGTTTaGATAAGTTTACGAGTAAGAAACCCTTTTGCCACG | + |
|
Preference number: 6 (lower is better) Translates to: FTVCRSCFSLSV*ISLRVRNPFAT Trigger: CGTGGCAAAAGGGTTTCTTACTCGTAAACTTATGCAAACAGACAAACTGAAGCAGCTTCGACAAACTGTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| CDS CAA 90 bp | CTCCGATGCATCGTAGGACTCATACTTGGCTCTGGACTAGGTAATTaGGCATATGGACCTTTAAGACTTTTAACTTTATTTTCAGTAACA | + |
|
Preference number: 6 (lower is better) Translates to: LRCIVGLILGSGLGN*AYGPLRLLTLFSVT Trigger: TGTTACTGAAAATAAAGTTAAAAGTCTTAAAGGTCCATATGCCAAATTACCTAGTCCAGAGCCAAGTATGAGTCCTACGATGCATCGGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| CDS CAA 72 bp | ATGGTGTCTTTTACAGTTTGTCGAAGCTGCTTCAGTTaGTCTGTTTGCATAAGTTTACGAGTAAGAAACCCT | + |
|
Preference number: 6 (lower is better) Translates to: MVSFTVCRSCFS*SVCISLRVRNP Trigger: AGGGTTTCTTACTCGTAAACTTATGCAAACAGACAAACTGAAGCAGCTTCGACAAACTGTAAAAGACACCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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| CDS CAA 72 bp | ATCGTAGGACTCATACTTGGCTCTGGACTAGGTAATTaGGCATATGGACCTTTAAGACTTTTAACTTTATTT | + |
|
Preference number: 6 (lower is better) Translates to: IVGLILGSGLGN*AYGPLRLLTLF Trigger: AAATAAAGTTAAAAGTCTTAAAGGTCCATATGCCAAATTACCTAGTCCAGAGCCAAGTATGAGTCCTACGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000038650.9 ENSMUST00000106557.8 ENSMUST00000123178.8 |
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