Pregenerated sensors for CCNYL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070871Ensembl transcript IDs: ENSMUST00000094898.5, ENSMUST00000114077.8, ENSMUST00000187170.7
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCTTCGCTCCCTGCCGTTGAAAGCCGGTGCATAGGCCTGCAAGGATaGGGCTTGAGAGAGACCTGCACCCAGGAGAGCGCGCAGGGTTTT | + |
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Preference number: 1 (lower is better) Translates to: SSLPAVESRCIGLQG*GLRETCTQESAQGF Trigger: AAAACCCTGCGCGCTCTCCTGGGTGCAGGTCTCTCTCAAGCCGCATCCTTGCAGGCCTATGCACCGGCTTTCAACGGCAGGGAGCGAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 |
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| 3UTR TCA 90 bp | ATCCGAGGTCTTCCCATCCCGTGGAGTCCCACCTCTGCTGCTCTCTaGTCAGGAGAGGTGCTGTTGCTCCAGCCTGTCTATGAGGAGTCC | + |
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Preference number: 1 (lower is better) Translates to: IRGLPIPWSPTSAAL*SGEVLLLQPVYEES Trigger: GGACTCCTCATAGACAGGCTGGAGCAACAGCACCTCTCCTGATCAGAGAGCAGCAGAGGTGGGACTCCACGGGATGGGAAGACCTCGGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 ENSMUST00000187170.7 |
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| 3UTR TCA 90 bp | TTAGCTGCTACTGCCATCCCTTTCCCAGTCTTCGCTCCCTGCCGTTaGAAGCCGGTGCATAGGCCTGCAAGGATGCGGCTTGAGAGAGAC | + |
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Preference number: 1 (lower is better) Translates to: LAATAIPFPVFAPCR*KPVHRPARMRLERD Trigger: GTCTCTCTCAAGCCGCATCCTTGCAGGCCTATGCACCGGCTTTCAACGGCAGGGAGCGAAGACTGGGAAAGGGATGGCAGTAGCAGCTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 |
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| 3UTR TCA 90 bp | TCCCATTCTTTCCTATGGAGTCAGCAGTCACTGTCCAGAGTCTCTTaGATCCGAGGTCTTCCCATCCCGTGGAGTCCCACCTCTGCTGCT | + |
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Preference number: 1 (lower is better) Translates to: SHSFLWSQQSLSRVS*IRGLPIPWSPTSAA Trigger: AGCAGCAGAGGTGGGACTCCACGGGATGGGAAGACCTCGGATTCAAGAGACTCTGGACAGTGACTGCTGACTCCATAGGAAAGAATGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 ENSMUST00000187170.7 |
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| 3UTR CCA 90 bp | GCGTGGACGCAACAGAAGTGGTCAGCACAGGACACTCTCTCTCTATaGCTCCAAACACACCAAAATGCCAGCAAGCAGCGCTTACGAACA | + |
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Preference number: 1 (lower is better) Translates to: AWTQQKWSAQDTLSL*LQTHQNASKQRLRT Trigger: TGTTCGTAAGCGCTGCTTGCTGGCATTTTGGTGTGTTTGGAGCCATAGAGAGAGAGTGTCCTGTGCTGACCACTTCTGTTGCGTCCACGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 |
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| 3UTR GCA 90 bp | CAGCCATTGGCCTACATGGTAAGCACGATCTGTGGTCAGCGCTGTTaGTGTGGAGTGGTTTCTGTAACCGTTTACATTACAAAGGACAGA | + |
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Preference number: 1 (lower is better) Translates to: QPLAYMVSTICGQRC*CGVVSVTVYITKDR Trigger: TCTGTCCTTTGTAATGTAAACGGTTACAGAAACCACTCCACAGCAACAGCGCTGACCACAGATCGTGCTTACCATGTAGGCCAATGGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 ENSMUST00000187170.7 |
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| 3UTR CCA 90 bp | CTCGCATATTTCACAGCCATTGGCCTACATGGTAAGCACGATCTGTaGTCAGCGCTGTTGCTGTGGAGTGGTTTCTGTAACCGTTTACAT | + |
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Preference number: 1 (lower is better) Translates to: LAYFTAIGLHGKHDL*SALLLWSGFCNRLH Trigger: ATGTAAACGGTTACAGAAACCACTCCACAGCAACAGCGCTGACCACAGATCGTGCTTACCATGTAGGCCAATGGCTGTGAAATATGCGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 ENSMUST00000187170.7 |
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| 3UTR CCA 90 bp | CTTGTATTTTACTATGGGATCATGTTCACTGACCTGCTATGTTGTTaGCATTATGAAGCATCTTTAATACACTTGTTTAACACACGAGAG | + |
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Preference number: 1 (lower is better) Translates to: LVFYYGIMFTDLLCC*HYEASLIHLFNTRE Trigger: CTCTCGTGTGTTAAACAAGTGTATTAAAGATGCTTCATAATGCCAACAACATAGCAGGTCAGTGAACATGATCCCATAGTAAAATACAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 |
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| 3UTR CAA 90 bp | CTCCCTGCCGTTGAAAGCCGGTGCATAGGCCTGCAAGGATGCGGCTaGAGAGAGACCTGCACCCAGGAGAGCGCGCAGGGTTTTAATTGC | + |
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Preference number: 2 (lower is better) Translates to: LPAVESRCIGLQGCG*RETCTQESAQGFNC Trigger: GCAATTAAAACCCTGCGCGCTCTCCTGGGTGCAGGTCTCTCTCAAGCCGCATCCTTGCAGGCCTATGCACCGGCTTTCAACGGCAGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 |
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| 3UTR-3UTR TCA 90 bp | GTCTTCCCATCCCGTGGAGTCCCACCTCTGCTGCTCTCTGATCAGGAGAGGTGCGCTCCAGCCTGTCTATaGGGAGTCCCTGGTGTTCTT | + |
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Preference number: 2 (lower is better) Translates to: VFPSRGVPPLLLSDQERCAPACL*GVPGVL Trigger: AAGAACACCAGGGACTCCTCATAGACAGGCTGGAGC...GCACCTCTCCTGATCAGAGAGCAGCAGAGGTGGGACTCCACGGGATGGGAAGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 ENSMUST00000187170.7 |
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| 3UTR-3UTR GCA 90 bp | GTCACTGTCCAGAGTCTCTTGAATCCGAGGTCTTCCCATCCCGTGGAGTCCCACCAGGAGAGGTGCTGTTaGTCCAGCCTGTCTATGAGG | + |
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Preference number: 2 (lower is better) Translates to: VTVQSLLNPRSSHPVESHQERCC*SSLSMR Trigger: CCTCATAGACAGGCTGGAGCAACAGCACCTCTCCTG...GTGGGACTCCACGGGATGGGAAGACCTCGGATTCAAGAGACTCTGGACAGTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 ENSMUST00000187170.7 |
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| 3UTR-3UTR TCA 90 bp | AGTCACTGTCCAGAGTCTCTTGAATCCGAGGTCTTCCCATCCCGTGGAGTCCCAGCTCCAGCCTGTCTATaGGGAGTCCCTGGTGTTCTT | + |
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Preference number: 2 (lower is better) Translates to: SHCPESLESEVFPSRGVPAPACL*GVPGVL Trigger: AAGAACACCAGGGACTCCTCATAGACAGGCTGGAGC...TGGGACTCCACGGGATGGGAAGACCTCGGATTCAAGAGACTCTGGACAGTGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 ENSMUST00000187170.7 |
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| 3UTR-3UTR CCA 90 bp | TATTTCACAGCCATTGGCCTACATGGTAAGCACGATCTGTGGTCAGCGCTGTTGGGTCTTCCCATCCCGTaGAGTCCCACCTCTGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: YFTAIGLHGKHDLWSALLGLPIP*SPTSAA Trigger: AGCAGCAGAGGTGGGACTCCACGGGATGGGAAGACC...CAACAGCGCTGACCACAGATCGTGCTTACCATGTAGGCCAATGGCTGTGAAATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 ENSMUST00000187170.7 |
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| 3UTR-3UTR GCA 90 bp | CTCGCATATTTCACAGCCATTGGCCTACATGGTAAGCACGATCTGTGGTCAGCGCAGGAGAGGTGCTGTTaGTCCAGCCTGTCTATGAGG | + |
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Preference number: 2 (lower is better) Translates to: LAYFTAIGLHGKHDLWSAQERCC*SSLSMR Trigger: CCTCATAGACAGGCTGGAGCAACAGCACCTCTCCTG...CGCTGACCACAGATCGTGCTTACCATGTAGGCCAATGGCTGTGAAATATGCGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 ENSMUST00000187170.7 |
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| 3UTR-3UTR GCA 90 bp | CTCGCATATTTCACAGCCATTGGCCTACATGGTAAGCACGATCTGTGGTCAGCGGTGGAGTCCCACCTCTaGTGCTCTCTGATCAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: LAYFTAIGLHGKHDLWSAVESHL*CSLIRR Trigger: TCTCCTGATCAGAGAGCAGCAGAGGTGGGACTCCAC...CGCTGACCACAGATCGTGCTTACCATGTAGGCCAATGGCTGTGAAATATGCGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 ENSMUST00000187170.7 |
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| 3UTR-3UTR CCA 90 bp | CAGCGCTGTTGCTGTGGAGTGGTTTCTGTAACCGTTTACATTACAAAGGACAGAGGTCTTCCCATCCCGTaGAGTCCCACCTCTGCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: QRCCCGVVSVTVYITKDRGLPIP*SPTSAA Trigger: AGCAGCAGAGGTGGGACTCCACGGGATGGGAAGACC...TCTGTCCTTTGTAATGTAAACGGTTACAGAAACCACTCCACAGCAACAGCGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 ENSMUST00000187170.7 |
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| 3UTR-3UTR TCA 90 bp | TATGGCTCCAAACACACCAAAATGCCAGCAAGCAGCGCTTACGAACAACGTGAAGCTCCAGCCTGTCTATaGGGAGTCCCTGGTGTTCTT | + |
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Preference number: 2 (lower is better) Translates to: YGSKHTKMPASSAYEQREAPACL*GVPGVL Trigger: AAGAACACCAGGGACTCCTCATAGACAGGCTGGAGC...TTCACGTTGTTCGTAAGCGCTGCTTGCTGGCATTTTGGTGTGTTTGGAGCCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 |
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| 3UTR-3UTR TCA 90 bp | CTCGCATATTTCACAGCCATTGGCCTACATGGTAAGCACGATCTGTGGTCAGCGAGAGAGCTGTTGCTTTaGCAAGGTCCCATTCTTTCC | + |
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Preference number: 2 (lower is better) Translates to: LAYFTAIGLHGKHDLWSARELLL*QGPILS Trigger: GGAAAGAATGGGACCTTGTCAAAGCAACAGCTCTCT...CGCTGACCACAGATCGTGCTTACCATGTAGGCCAATGGCTGTGAAATATGCGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 ENSMUST00000187170.7 |
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| 3UTR-3UTR TCA 90 bp | GCATGGGAAGCATTGCAGCCTCAAGAGGAAGTATTCGTGGCCCACAAAAGGCTTCTGGCAAAGAACACTTaGGAACAGAGTGCTTCCATG | + |
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Preference number: 2 (lower is better) Translates to: AWEALQPQEEVFVAHKRLLAKNT*EQSASM Trigger: CATGGAAGCACTCTGTTCTCAAGTGTTCTTTGCCAG...AAGCCTTTTGTGGGCCACGAATACTTCCTCTTGAGGCTGCAATGCTTCCCATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 |
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| 3UTR-3UTR CCA 90 bp | GTGGTCAGCACAGGACACTCTCTCTCTATGGCTCCAAACACACCAAAATGCCAGTCCCATTCTTTCCTATaGAGTCAGCAGTCACTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: VVSTGHSLSMAPNTPKCQSHSFL*SQQSLS Trigger: GGACAGTGACTGCTGACTCCATAGGAAAGAATGGGA...CTGGCATTTTGGTGTGTTTGGAGCCATAGAGAGAGAGTGTCCTGTGCTGACCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 |
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| 3UTR-3UTR CCA 90 bp | GTGGTCAGCACAGGACACTCTCTCTCTATGGCTCCAAACACACCAAAATGCCAGTACGAACAACGTGAATaGCGAGTGTTTCCAGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: VVSTGHSLSMAPNTPKCQYEQRE*RVFPAA Trigger: AGCTGCTGGAAACACTCGCCATTCACGTTGTTCGTA...CTGGCATTTTGGTGTGTTTGGAGCCATAGAGAGAGAGTGTCCTGTGCTGACCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 |
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| 3UTR CAA 90 bp | ACAGCCATTGGCCTACATGGTAAGCACGATCTGTGGTCAGCGCTGTaGCTGTGGAGTGGTTTCTGTAACCGTTTACATTACAAAGGACAG | + |
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Preference number: 2 (lower is better) Translates to: TAIGLHGKHDLWSAL*LWSGFCNRLHYKGQ Trigger: CTGTCCTTTGTAATGTAAACGGTTACAGAAACCACTCCACAGCAACAGCGCTGACCACAGATCGTGCTTACCATGTAGGCCAATGGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 ENSMUST00000187170.7 |
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| 3UTR-3UTR TCA 90 bp | TGGCCCACAAAAGGCTTTTTAGGTAAGACTCCCAAGGTTAGATGTGAGAAGAAAACCTCTGCTGCTCTCTaGTCAGGAGAGGTGCTGTTG | + |
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Preference number: 2 (lower is better) Translates to: WPTKGFLGKTPKVRCEKKTSAAL*SGEVLL Trigger: CAACAGCACCTCTCCTGATCAGAGAGCAGCAGAGGT...TTTCTTCTCACATCTAACCTTGGGAGTCTTACCTAAAAAGCCTTTTGTGGGCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 |
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| 3UTR-3UTR GCA 90 bp | CACTTGCTAGGTCTTCAATTTGATTCCCAGCACCACAAAAATGGAGAAGGATTCGTGGAGTCCCACCTCTaGTGCTCTCTGATCAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: HLLGLQFDSQHHKNGEGFVESHL*CSLIRR Trigger: TCTCCTGATCAGAGAGCAGCAGAGGTGGGACTCCAC...GAATCCTTCTCCATTTTTGTGGTGCTGGGAATCAAATTGAAGACCTAGCAAGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 |
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| 3UTR-3UTR CCA 90 bp | GCATGGGAAGCATTGCAGCCTCAAGAGGAAGTATTCGTGGCCCACAAAAGGCTTGACACTCTCTCTCTATaGCTCCAAACACACCAAAAT | + |
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Preference number: 2 (lower is better) Translates to: AWEALQPQEEVFVAHKRLDTLSL*LQTHQN Trigger: ATTTTGGTGTGTTTGGAGCCATAGAGAGAGAGTGTC...AAGCCTTTTGTGGGCCACGAATACTTCCTCTTGAGGCTGCAATGCTTCCCATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 |
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| 3UTR GCA 72 bp | CCTGCCGTTGAAAGCCGGTGCATAGGCCTGCAAGGATaGGGCTTGAGAGAGACCTGCACCCAGGAGAGCGCG | + |
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Preference number: 3 (lower is better) Translates to: PAVESRCIGLQG*GLRETCTQESA Trigger: CGCGCTCTCCTGGGTGCAGGTCTCTCTCAAGCCGCATCCTTGCAGGCCTATGCACCGGCTTTCAACGGCAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 |
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| 3UTR GCA 72 bp | GGAGTCCCACCTCTGCTGCTCTCTGATCAGGAGAGGTaGTGTTGCTCCAGCCTGTCTATGAGGAGTCCCTGG | + |
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Preference number: 3 (lower is better) Translates to: GVPPLLLSDQER*CCSSLSMRSPW Trigger: CCAGGGACTCCTCATAGACAGGCTGGAGCAACAGCACCTCTCCTGATCAGAGAGCAGCAGAGGTGGGACTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 ENSMUST00000187170.7 |
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| 3UTR TCA 72 bp | CTTCCCATCCCGTGGAGTCCCACCTCTGCTGCTCTCTaGTCAGGAGAGGTGCTGTTGCTCCAGCCTGTCTAT | + |
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Preference number: 3 (lower is better) Translates to: LPIPWSPTSAAL*SGEVLLLQPVY Trigger: ATAGACAGGCTGGAGCAACAGCACCTCTCCTGATCAGAGAGCAGCAGAGGTGGGACTCCACGGGATGGGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 ENSMUST00000187170.7 |
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| 3UTR GCA 72 bp | AGAGCCCAGCCTGGCAAAGAACACTTGAGAACAGAGTaGTTCCATGGAAAGGCACGGCAGCTCCCACAGCTC | + |
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Preference number: 3 (lower is better) Translates to: RAQPGKEHLRTE*FHGKARQLPQL Trigger: GAGCTGTGGGAGCTGCCGTGCCTTTCCATGGAAGCACTCTGTTCTCAAGTGTTCTTTGCCAGGCTGGGCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 |
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| 3UTR GCA 72 bp | TGCATAGGCCTGCAAGGATGCGGCTTGAGAGAGACCTaGACCCAGGAGAGCGCGCAGGGTTTTAATTGCTCA | + |
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Preference number: 3 (lower is better) Translates to: CIGLQGCGLRET*TQESAQGFNCS Trigger: TGAGCAATTAAAACCCTGCGCGCTCTCCTGGGTGCAGGTCTCTCTCAAGCCGCATCCTTGCAGGCCTATGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 |
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| 3UTR TCA 72 bp | TTCCTATGGAGTCAGCAGTCACTGTCCAGAGTCTCTTaGATCCGAGGTCTTCCCATCCCGTGGAGTCCCACC | + |
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Preference number: 3 (lower is better) Translates to: FLWSQQSLSRVS*IRGLPIPWSPT Trigger: GGTGGGACTCCACGGGATGGGAAGACCTCGGATTCAAGAGACTCTGGACAGTGACTGCTGACTCCATAGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 ENSMUST00000187170.7 |
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| 3UTR TCA 72 bp | TCAAAGCGGCTAGAGCCCAGCCTGGCAAAGAACACTTaGGAACAGAGTGCTTCCATGGAAAGGCACGGCAGC | + |
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Preference number: 3 (lower is better) Translates to: SKRLEPSLAKNT*EQSASMERHGS Trigger: GCTGCCGTGCCTTTCCATGGAAGCACTCTGTTCTCAAGTGTTCTTTGCCAGGCTGGGCTCTAGCCGCTTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 |
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| 3UTR CCA 72 bp | GCCTGGCAAAGAACACTTGAGAACAGAGTGCTTCCATaGAAAGGCACGGCAGCTCCCACAGCTCCACGTAGT | + |
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Preference number: 3 (lower is better) Translates to: AWQRTLENRVLP*KGTAAPTAPRS Trigger: ACTACGTGGAGCTGTGGGAGCTGCCGTGCCTTTCCATGGAAGCACTCTGTTCTCAAGTGTTCTTTGCCAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 |
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| 3UTR-3UTR CAA 90 bp | ATGGAGTCAGCAGTCACTGTCCAGAGTCTCTTGAATCCGAGGTCTTCCCATCCCTCAGGAGAGGTGCTGTaGCTCCAGCCTGTCTATGAG | + |
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Preference number: 3 (lower is better) Translates to: MESAVTVQSLLNPRSSHPSGEVL*LQPVYE Trigger: CTCATAGACAGGCTGGAGCAACAGCACCTCTCCTGA...GGGATGGGAAGACCTCGGATTCAAGAGACTCTGGACAGTGACTGCTGACTCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 ENSMUST00000187170.7 |
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| 3UTR GCA 72 bp | GATGAGCCTGGCAGCACTGACGAGCATGGGAAGCATTaGAGCCTCAAGAGGAAGTATTCGTGGCCCACAAAA | + |
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Preference number: 3 (lower is better) Translates to: DEPGSTDEHGKH*SLKRKYSWPTK Trigger: TTTTGTGGGCCACGAATACTTCCTCTTGAGGCTGCAATGCTTCCCATGCTCGTCAGTGCTGCCAGGCTCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 |
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| 3UTR CCA 72 bp | CAACAGAAGTGGTCAGCACAGGACACTCTCTCTCTATaGCTCCAAACACACCAAAATGCCAGCAAGCAGCGC | + |
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Preference number: 3 (lower is better) Translates to: QQKWSAQDTLSL*LQTHQNASKQR Trigger: GCGCTGCTTGCTGGCATTTTGGTGTGTTTGGAGCCATAGAGAGAGAGTGTCCTGTGCTGACCACTTCTGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 |
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| 3UTR GCA 72 bp | GGACACTCTCTCTCTATGGCTCCAAACACACCAAAATaGCAGCAAGCAGCGCTTACGAACAACGTGAATGGC | + |
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Preference number: 3 (lower is better) Translates to: GHSLSMAPNTPK*QQAALTNNVNG Trigger: GCCATTCACGTTGTTCGTAAGCGCTGCTTGCTGGCATTTTGGTGTGTTTGGAGCCATAGAGAGAGAGTGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 |
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| 3UTR CCA 72 bp | AGCACCATTAGTAGTGAACAGGAAATGAACGCAGCGTaGACGCAACAGAAGTGGTCAGCACAGGACACTCTC | + |
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Preference number: 3 (lower is better) Translates to: STISSEQEMNAA*TQQKWSAQDTL Trigger: GAGAGTGTCCTGTGCTGACCACTTCTGTTGCGTCCACGCTGCGTTCATTTCCTGTTCACTACTAATGGTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 |
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| 3UTR-3UTR CAA 90 bp | GCATGGGAAGCATTGCAGCCTCAAGAGGAAGTATTCGTGGCCCACAAAAGGCTTCATATTTCACAGCCATaGGCCTACATGGTAAGCACG | + |
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Preference number: 3 (lower is better) Translates to: AWEALQPQEEVFVAHKRLHISQP*AYMVST Trigger: CGTGCTTACCATGTAGGCCAATGGCTGTGAAATATG...AAGCCTTTTGTGGGCCACGAATACTTCCTCTTGAGGCTGCAATGCTTCCCATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 |
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| 3UTR GCA 72 bp | GAGACCTGCACCCAGGAGAGCGCGCAGGGTTTTAATTaGTCATTTCACCTGCTGTTTGAGGATCTGATTTCT | + |
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Preference number: 3 (lower is better) Translates to: ETCTQESAQGFN*SFHLLFEDLIS Trigger: AGAAATCAGATCCTCAAACAGCAGGTGAAATGAGCAATTAAAACCCTGCGCGCTCTCCTGGGTGCAGGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 |
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| 3UTR TCA 72 bp | AGGAGTTCAAGGACAGCCTCAATCGTATACTTAGTTTaGGGCCAGCCCAGGCTATGTAAGACCCTGTCTCAA | + |
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Preference number: 3 (lower is better) Translates to: RSSRTASIVYLV*GQPRLCKTLSQ Trigger: TTGAGACAGGGTCTTACATAGCCTGGGCTGGCCTCAAACTAAGTATACGATTGAGGCTGTCCTTGAACTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 |
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| 3UTR TCA 72 bp | CACCAAAATGCCAGCAAGCAGCGCTTACGAACAACGTaGATGGCGAGTGTTTCCAGCAGCTTTCTGGTAATT | + |
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Preference number: 3 (lower is better) Translates to: HQNASKQRLRTT*MASVSSSFLVI Trigger: AATTACCAGAAAGCTGCTGGAAACACTCGCCATTCACGTTGTTCGTAAGCGCTGCTTGCTGGCATTTTGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 |
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| 3UTR GCA 72 bp | GCCTACATGGTAAGCACGATCTGTGGTCAGCGCTGTTaGTGTGGAGTGGTTTCTGTAACCGTTTACATTACA | + |
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Preference number: 3 (lower is better) Translates to: AYMVSTICGQRC*CGVVSVTVYIT Trigger: TGTAATGTAAACGGTTACAGAAACCACTCCACAGCAACAGCGCTGACCACAGATCGTGCTTACCATGTAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 ENSMUST00000187170.7 |
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| 3UTR CCA 72 bp | CATGGGAAGCATTGCAGCCTCAAGAGGAAGTATTCGTaGCCCACAAAAGGCTTTTTAGGTAAGACTCCCAAG | + |
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Preference number: 3 (lower is better) Translates to: HGKHCSLKRKYS*PTKGFLGKTPK Trigger: CTTGGGAGTCTTACCTAAAAAGCCTTTTGTGGGCCACGAATACTTCCTCTTGAGGCTGCAATGCTTCCCATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 |
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| 3UTR-3UTR CAA 90 bp | ATGACTAGCAGCTCTGATGATACAGTGAGAGAACCTTTAATACCTAATGAGGCTTCAGGAGAGGTGCTGTaGCTCCAGCCTGTCTATGAG | + |
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Preference number: 3 (lower is better) Translates to: MTSSSDDTVREPLIPNEASGEVL*LQPVYE Trigger: CTCATAGACAGGCTGGAGCAACAGCACCTCTCCTGA...AGCCTCATTAGGTATTAAAGGTTCTCTCACTGTATCATCAGAGCTGCTAGTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 |
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| 3UTR TCA 72 bp | GGTGGTTTCATGAGTGTTAAGAATCCTGTTTGGGGCTaGGGAGTGTTGCTCAGTGGTCAAATGCTTACCAAG | + |
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Preference number: 3 (lower is better) Translates to: GGFMSVKNPVWG*GVLLSGQMLTK Trigger: CTTGGTAAGCATTTGACCACTGAGCAACACTCCTCAGCCCCAAACAGGATTCTTAACACTCATGAAACCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 |
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| 3UTR TCA 72 bp | TCAAATGCTTACCAAGCACTTGCTAGGTCTTCAATTTaGTTCCCAGCACCACAAAAATGGAGAAGGATTCTC | + |
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Preference number: 3 (lower is better) Translates to: SNAYQALARSSI*FPAPQKWRRIL Trigger: GAGAATCCTTCTCCATTTTTGTGGTGCTGGGAATCAAATTGAAGACCTAGCAAGTGCTTGGTAAGCATTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 |
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| 3UTR-3UTR CAA 90 bp | TGGCCCACAAAAGGCTTTTTAGGTAAGACTCCCAAGGTTAGATGTGAGAAGAAACTTTCAAATGATGTTTaGTGCAAGTTTGTGGCTTCT | + |
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Preference number: 3 (lower is better) Translates to: WPTKGFLGKTPKVRCEKKLSNDV*CKFVAS Trigger: AGAAGCCACAAACTTGCACAAAACATCATTTGAAAG...TTTCTTCTCACATCTAACCTTGGGAGTCTTACCTAAAAAGCCTTTTGTGGGCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 |
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| 3UTR CCA 72 bp | TACTATGGGATCATGTTCACTGACCTGCTATGTTGTTaGCATTATGAAGCATCTTTAATACACTTGTTTAAC | + |
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Preference number: 3 (lower is better) Translates to: YYGIMFTDLLCC*HYEASLIHLFN Trigger: GTTAAACAAGTGTATTAAAGATGCTTCATAATGCCAACAACATAGCAGGTCAGTGAACATGATCCCATAGTA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 |
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| 3UTR CAA 72 bp | TTTCCTATGGAGTCAGCAGTCACTGTCCAGAGTCTCTaGAATCCGAGGTCTTCCCATCCCGTGGAGTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: FPMESAVTVQSL*NPRSSHPVESH Trigger: GTGGGACTCCACGGGATGGGAAGACCTCGGATTCAAGAGACTCTGGACAGTGACTGCTGACTCCATAGGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 ENSMUST00000187170.7 |
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| 3UTR CAA 72 bp | ATCAAAGCGGCTAGAGCCCAGCCTGGCAAAGAACACTaGAGAACAGAGTGCTTCCATGGAAAGGCACGGCAG | + |
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Preference number: 4 (lower is better) Translates to: IKAARAQPGKEH*RTECFHGKARQ Trigger: CTGCCGTGCCTTTCCATGGAAGCACTCTGTTCTCAAGTGTTCTTTGCCAGGCTGGGCTCTAGCCGCTTTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 |
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| CDS-3UTR TCA 90 bp | AGTCACTGTCCAGAGTCTCTTGAATCCGAGGTCTTCCCATCCCGTGGAGTCCCAGAACTTTCTCTCTTGTaGGAGGATGTGACCGCTCAT | + |
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Preference number: 4 (lower is better) Translates to: SHCPESLESEVFPSRGVPELSLL*EDVTAH Trigger: ATGAGCGGTCACATCCTCTCACAAGAGAGAAAGTTC...TGGGACTCCACGGGATGGGAAGACCTCGGATTCAAGAGACTCTGGACAGTGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 ENSMUST00000187170.7 |
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| CDS-3UTR TCA 90 bp | TGCTCCAGCCTGTCTATGAGGAGTCCCTGGTGTTCTTACTCCTCGAGTCTCTCTGAACTTTCTCTCTTGTaGGAGGATGTGACCGCTCAT | + |
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Preference number: 4 (lower is better) Translates to: CSSLSMRSPWCSYSSSLSELSLL*EDVTAH Trigger: ATGAGCGGTCACATCCTCTCACAAGAGAGAAAGTTC...AGAGAGACTCGAGGAGTAAGAACACCAGGGACTCCTCATAGACAGGCTGGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 ENSMUST00000187170.7 |
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| 3UTR CAA 72 bp | GGCCTACATGGTAAGCACGATCTGTGGTCAGCGCTGTaGCTGTGGAGTGGTTTCTGTAACCGTTTACATTAC | + |
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Preference number: 4 (lower is better) Translates to: GLHGKHDLWSAL*LWSGFCNRLHY Trigger: GTAATGTAAACGGTTACAGAAACCACTCCACAGCAACAGCGCTGACCACAGATCGTGCTTACCATGTAGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 ENSMUST00000187170.7 |
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| CDS-3UTR TCA 90 bp | TTTCCTATGGAGTCAGCAGTCACTGTCCAGAGTCTCTTGAATCCGAGGTCTTCCGAACTTTCTCTCTTGTaGGAGGATGTGACCGCTCAT | + |
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Preference number: 4 (lower is better) Translates to: FPMESAVTVQSLLNPRSSELSLL*EDVTAH Trigger: ATGAGCGGTCACATCCTCTCACAAGAGAGAAAGTTC...GGAAGACCTCGGATTCAAGAGACTCTGGACAGTGACTGCTGACTCCATAGGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 ENSMUST00000187170.7 |
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| CDS-3UTR GCA 90 bp | TGCTCCAGCCTGTCTATGAGGAGTCCCTGGTGTTCTTACTCCTCGAGTCTCTCTAGTAGCTCCAAGAAATaGCTTTCCATCTCATTCATG | + |
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Preference number: 4 (lower is better) Translates to: CSSLSMRSPWCSYSSSLSSSSKK*LSISFM Trigger: CATGAATGAGATGGAAAGGCATTTCTTGGAGCTACT...AGAGAGACTCGAGGAGTAAGAACACCAGGGACTCCTCATAGACAGGCTGGAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 ENSMUST00000187170.7 |
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| CDS-3UTR GCA 90 bp | AAAGAACACTTGAGAACAGAGTGCTTCCATGGAAAGGCACGGCAGCTCCCACAGAGTAGCTCCAAGAAATaGCTTTCCATCTCATTCATG | + |
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Preference number: 4 (lower is better) Translates to: KEHLRTECFHGKARQLPQSSSKK*LSISFM Trigger: CATGAATGAGATGGAAAGGCATTTCTTGGAGCTACT...CTGTGGGAGCTGCCGTGCCTTTCCATGGAAGCACTCTGTTCTCAAGTGTTCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 |
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| CDS-3UTR CCA 90 bp | TTTCCTATGGAGTCAGCAGTCACTGTCCAGAGTCTCTTGAATCCGAGGTCTTCCCTTAAAGTACTCCTCTaGAACTTTCTCTCTTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: FPMESAVTVQSLLNPRSSLKVLL*NFLSCE Trigger: CTCACAAGAGAGAAAGTTCCAGAGGAGTACTTTAAG...GGAAGACCTCGGATTCAAGAGACTCTGGACAGTGACTGCTGACTCCATAGGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 ENSMUST00000187170.7 |
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| CDS-3UTR CCA 90 bp | CTTTCCTATGGAGTCAGCAGTCACTGTCCAGAGTCTCTTGAATCCGAGGTCTTCCTTAAAGTACTCCTCTaGAACTTTCTCTCTTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: LSYGVSSHCPESLESEVFLKVLL*NFLSCE Trigger: CTCACAAGAGAGAAAGTTCCAGAGGAGTACTTTAAG...GAAGACCTCGGATTCAAGAGACTCTGGACAGTGACTGCTGACTCCATAGGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 ENSMUST00000187170.7 |
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| 3UTR CAA 72 bp | GGAGTGTTGCTCAGTGGTCAAATGCTTACCAAGCACTaGCTAGGTCTTCAATTTGATTCCCAGCACCACAAA | + |
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Preference number: 4 (lower is better) Translates to: GVLLSGQMLTKH*LGLQFDSQHHK Trigger: TTTGTGGTGCTGGGAATCAAATTGAAGACCTAGCAAGTGCTTGGTAAGCATTTGACCACTGAGCAACACTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 |
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| CDS-3UTR GCA 90 bp | AAAACCTCGCATATTTCACAGCCATTGGCCTACATGGTAAGCACGATCTGTGGTAGTAGCTCCAAGAAATaGCTTTCCATCTCATTCATG | + |
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Preference number: 4 (lower is better) Translates to: KTSHISQPLAYMVSTICGSSSKK*LSISFM Trigger: CATGAATGAGATGGAAAGGCATTTCTTGGAGCTACT...ACCACAGATCGTGCTTACCATGTAGGCCAATGGCTGTGAAATATGCGAGGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 ENSMUST00000187170.7 |
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| CDS-3UTR CCA 90 bp | TGGCCCACAAAAGGCTTTTTAGGTAAGACTCCCAAGGTTAGATGTGAGAAGAAACTTAAAGTACTCCTCTaGAACTTTCTCTCTTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: WPTKGFLGKTPKVRCEKKLKVLL*NFLSCE Trigger: CTCACAAGAGAGAAAGTTCCAGAGGAGTACTTTAAG...TTTCTTCTCACATCTAACCTTGGGAGTCTTACCTAAAAAGCCTTTTGTGGGCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 |
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| 3UTR CAA 72 bp | CTATGTTGTTGGCATTATGAAGCATCTTTAATACACTaGTTTAACACACGAGAGAGAAGAGATCAGAGGATG | + |
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Preference number: 4 (lower is better) Translates to: LCCWHYEASLIH*FNTRERRDQRM Trigger: CATCCTCTGATCTCTTCTCTCTCGTGTGTTAAACAAGTGTATTAAAGATGCTTCATAATGCCAACAACATAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094898.5 ENSMUST00000114077.8 |
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