Pregenerated sensors for CCNY (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024286Ensembl transcript IDs: ENSMUST00000053917.6, ENSMUST00000234102.2, ENSMUST00000234779.2, ENSMUST00000234844.2
Found 199 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTCACAGAGACGAGAGATGGCCTCAAGCTTGTGGGCACGCTCTCTaGTTAGGGGCTCCAGAGGAAAGCTCAGGTTGTTTGCTTCTGCCA | + |
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Preference number: 1 (lower is better) Translates to: PHRDERWPQACGHAL*LGAPEESSGCLLLP Trigger: TGGCAGAAGCAAACAACCTGAGCTTTCCTCTGGAGCCCCTAAGCAGAGAGCGTGCCCACAAGCTTGAGGCCATCTCTCGTCTCTGTGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234779.2 ENSMUST00000234844.2 |
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| 3UTR TCA 90 bp | GATGGCTGGAGACCACCTTGGCAGAATCAGGTTGTCAGCACTTGCTaGACGCTTCCTCATGGGTTTCCTCAGGTCCTTGTACTTGTCCTC | + |
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Preference number: 1 (lower is better) Translates to: DGWRPPWQNQVVSTC*TLPHGFPQVLVLVL Trigger: GAGGACAAGTACAAGGACCTGAGGAAACCCATGAGGAAGCGTTCAGCAAGTGCTGACAACCTGATTCTGCCAAGGTGGTCTCCAGCCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234779.2 ENSMUST00000234844.2 |
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| 3UTR CCA 90 bp | ACCTTGGCAGAATCAGGTTGTCAGCACTTGCTGAACGCTTCCTCATaGGTTTCCTCAGGTCCTTGTACTTGTCCTCACAGAGACGAGAGA | + |
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Preference number: 1 (lower is better) Translates to: TLAESGCQHLLNASS*VSSGPCTCPHRDER Trigger: TCTCTCGTCTCTGTGAGGACAAGTACAAGGACCTGAGGAAACCCATGAGGAAGCGTTCAGCAAGTGCTGACAACCTGATTCTGCCAAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234779.2 ENSMUST00000234844.2 |
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| 3UTR CCA 90 bp | TACAGAGCACACAGATTCCAAGGGCATAGCATGGCATTCCCGATTTaGAGATGCATTCAACTCTGCTACCTATCATCTGGCTCCATCTGG | + |
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Preference number: 1 (lower is better) Translates to: YRAHRFQGHSMAFPI*RCIQLCYLSSGSIW Trigger: CCAGATGGAGCCAGATGATAGGTAGCAGAGTTGAATGCATCTCCAAATCGGGAATGCCATGCTATGCCCTTGGAATCTGTGTGCTCTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 ENSMUST00000234779.2 |
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| 3UTR CCA 90 bp | AGCACTGAAGAGTGTCCGAACGAACCGGTAAATTTGCTTCTGTTCTaGGTTGTGTTTGTCATAATCAGGTGGCACTTCGGATTTCGAAAG | + |
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Preference number: 1 (lower is better) Translates to: STEECPNEPVNLLLF*VVFVIIRWHFGFRK Trigger: CTTTCGAAATCCGAAGTGCCACCTGATTATGACAAACACAACCCAGAACAGAAGCAAATTTACCGGTTCGTTCGGACACTCTTCAGTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234779.2 ENSMUST00000234844.2 |
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| 3UTR TCA 90 bp | TTCAGAAGACCATTCATGTTTGTAAGAACTGCCAAGGCTCAGTCTTaGGATATCCACTCCACTGAGGACCAGGACATAGTGGTTTATAAC | + |
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Preference number: 1 (lower is better) Translates to: FRRPFMFVRTAKAQS*DIHSTEDQDIVVYN Trigger: GTTATAAACCACTATGTCCTGGTCCTCAGTGGAGTGGATATCTCAAGACTGAGCCTTGGCAGTTCTTACAAACATGAATGGTCTTCTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053917.6 |
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| 3UTR TCA 90 bp | AAAGCAGCAAGAATATGCAAAATCATAACTCACCAAATTCTGCTTTaGCACTCAGGTAAGCAGCAAAATTCCCTGAAGCAAGGGAAACAC | + |
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Preference number: 1 (lower is better) Translates to: KAARICKIITHQILL*HSGKQQNSLKQGKH Trigger: GTGTTTCCCTTGCTTCAGGGAATTTTGCTGCTTACCTGAGTGTCAAAGCAGAATTTGGTGAGTTATGATTTTGCATATTCTTGCTGCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053917.6 |
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| 3UTR TCA 90 bp | TCCTTAGTGCAAGAAATACAACCAATTAATACAGTTAACACTCACTaGTGCAAAGAGAAAACCTTCCTATTCAGAGGTAGAGTCCAGTGT | + |
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Preference number: 1 (lower is better) Translates to: SLVQEIQPINTVNTH*CKEKTFLFRGRVQC Trigger: ACACTGGACTCTACCTCTGAATAGGAAGGTTTTCTCTTTGCATCAGTGAGTGTTAACTGTATTAATTGGTTGTATTTCTTGCACTAAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053917.6 |
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| 3UTR-3UTR CCA 90 bp | CAGCACAGCCTCAGGAGAGTGCCCCAGTTAGGAGATGATGGCTGGAGACCACCTCACAGAGACGAGAGATaGCCTCAAGCTTGTGGGCAC | + |
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Preference number: 2 (lower is better) Translates to: QHSLRRVPQLGDDGWRPPHRDER*PQACGH Trigger: GTGCCCACAAGCTTGAGGCCATCTCTCGTCTCTGTG...AGGTGGTCTCCAGCCATCATCTCCTAACTGGGGCACTCTCCTGAGGCTGTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234779.2 ENSMUST00000234844.2 |
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| 3UTR-3UTR CCA 90 bp | ACAAACATCCCCATCCCCAATCCCGAGAGCAGCATGAAGGAATGCAGGAAGTCTTGCACCCACCAAGTGTaGAGGCGGGCTGAAGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: TNIPIPNPESSMKECRKSCTHQV*RRAEGS Trigger: GCTGCCTTCAGCCCGCCTCCACACTTGGTGGGTGCA...AGACTTCCTGCATTCCTTCATGCTGCTCTCGGGATTGGGGATGGGGATGTTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 ENSMUST00000234779.2 |
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| 3UTR CAA 90 bp | GCACTTGCTGAACGCTTCCTCATGGGTTTCCTCAGGTCCTTGTACTaGTCCTCACAGAGACGAGAGATGGCCTCAAGCTTGTGGGCACGC | + |
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Preference number: 2 (lower is better) Translates to: ALAERFLMGFLRSLY*SSQRREMASSLWAR Trigger: GCGTGCCCACAAGCTTGAGGCCATCTCTCGTCTCTGTGAGGACAAGTACAAGGACCTGAGGAAACCCATGAGGAAGCGTTCAGCAAGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234779.2 ENSMUST00000234844.2 |
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| 3UTR-3UTR TCA 90 bp | GGTCCTTGTACTTGTCCTCACAGAGACGAGAGATGGCCTCAAGCTTGTGGGCACTCAGCTGAGCAGCACTaGAGAGTGTCCGAACGAACC | + |
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Preference number: 2 (lower is better) Translates to: GPCTCPHRDERWPQACGHSAEQH*RVSERT Trigger: GGTTCGTTCGGACACTCTTCAGTGCTGCTCAGCTGA...GTGCCCACAAGCTTGAGGCCATCTCTCGTCTCTGTGAGGACAAGTACAAGGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234779.2 ENSMUST00000234844.2 |
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| 3UTR CAA 90 bp | CACGCCTCACTGACTTCCTTGTCTCTAATGGAGCTGTCAGGTAGCTaGCTTCTGGGAGGGCATTCTGGTGCTGCTCTGTGCTCTGCATTC | + |
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Preference number: 2 (lower is better) Translates to: HASLTSLSLMELSGS*LLGGHSGAALCSAF Trigger: GAATGCAGAGCACAGAGCAGCACCAGAATGCCCTCCCAGAAGCAAGCTACCTGACAGCTCCATTAGAGACAAGGAAGTCAGTGAGGCGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053917.6 |
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| 3UTR-3UTR TCA 90 bp | TCAGCACTTGCTGAACGCTTCCTCATGGGTTTCCTCAGGTCCTTGTACTTGTCCTCAGCTGAGCAGCACTaGAGAGTGTCCGAACGAACC | + |
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Preference number: 2 (lower is better) Translates to: SALAERFLMGFLRSLYLSSAEQH*RVSERT Trigger: GGTTCGTTCGGACACTCTTCAGTGCTGCTCAGCTGA...GGACAAGTACAAGGACCTGAGGAAACCCATGAGGAAGCGTTCAGCAAGTGCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234779.2 ENSMUST00000234844.2 |
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| 3UTR-3UTR CCA 90 bp | AAGGAAAACCTCACAAACCTCGGTCACCGCAACCTAAGATGGGCAGAAGCAAAGGGGAGCACATGGACATaGCTCCTCATGAGGTCAGGG | + |
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Preference number: 2 (lower is better) Translates to: KENLTNLGHRNLRWAEAKGSTWT*LLMRSG Trigger: CCCTGACCTCATGAGGAGCCATGTCCATGTGCTCCC...CTTTGCTTCTGCCCATCTTAGGTTGCGGTGACCGAGGTTTGTGAGGTTTTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053917.6 |
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| 3UTR-3UTR CCA 90 bp | TCCTCACAGAGACGAGAGATGGCCTCAAGCTTGTGGGCACGCTCTCTGCTTAGGACATTCCACACAGCTTaGTCATCCCACACCTTAGAG | + |
|
Preference number: 2 (lower is better) Translates to: SSQRREMASSLWARSLLRTFHTA*SSHTLE Trigger: CTCTAAGGTGTGGGATGACCAAGCTGTGTGGAATGT...CCTAAGCAGAGAGCGTGCCCACAAGCTTGAGGCCATCTCTCGTCTCTGTGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234779.2 ENSMUST00000234844.2 |
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| 3UTR CAA 90 bp | TTGTCAGCACTTGCTGAACGCTTCCTCATGGGTTTCCTCAGGTCCTaGTACTTGTCCTCACAGAGACGAGAGATGGCCTCAAGCTTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: LSALAERFLMGFLRS*YLSSQRREMASSLW Trigger: CCACAAGCTTGAGGCCATCTCTCGTCTCTGTGAGGACAAGTACAAGGACCTGAGGAAACCCATGAGGAAGCGTTCAGCAAGTGCTGACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234779.2 ENSMUST00000234844.2 |
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| 3UTR-3UTR CCA 90 bp | CCCACCAAGTGTGGAGGCGGGCTGAAGGCAGCCTCGATGAGGCTATTGTTAAAATCCAAGGGCATAGCATaGCATTCCCGATTTGGAGAT | + |
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Preference number: 2 (lower is better) Translates to: PTKCGGGLKAASMRLLLKSKGIA*HSRFGD Trigger: ATCTCCAAATCGGGAATGCCATGCTATGCCCTTGGA...TTTTAACAATAGCCTCATCGAGGCTGCCTTCAGCCCGCCTCCACACTTGGTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 ENSMUST00000234779.2 ENSMUST00000234844.2 |
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| 3UTR-3UTR CCA 90 bp | CCCACCAAGTGTGGAGGCGGGCTGAAGGCAGCCTCGATGAGGCTATTGTTAAAAGCGCTTCCAATTGGCTaGACAGATATCAATCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: PTKCGGGLKAASMRLLLKALPIG*TDINLC Trigger: GCAGAGATTGATATCTGTCCAGCCAATTGGAAGCGC...TTTTAACAATAGCCTCATCGAGGCTGCCTTCAGCCCGCCTCCACACTTGGTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234779.2 ENSMUST00000234844.2 |
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| 3UTR-3UTR CCA 90 bp | AGATGGCCTCAAGCTTGTGGGCACGCTCTCTGCTTAGGGGCTCCAGAGGAAAGCCAATGCGCTTCCAATTaGCTGGACAGATATCAATCT | + |
|
Preference number: 2 (lower is better) Translates to: RWPQACGHALCLGAPEESQCASN*LDRYQS Trigger: AGATTGATATCTGTCCAGCCAATTGGAAGCGCATTG...GCTTTCCTCTGGAGCCCCTAAGCAGAGAGCGTGCCCACAAGCTTGAGGCCATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234779.2 ENSMUST00000234844.2 |
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| 3UTR-3UTR CCA 90 bp | GCTCTCTGCTTAGGGGCTCCAGAGGAAAGCTCAGGTTGTTTGCTTCTGCCAGAGACATTCCACACAGCTTaGTCATCCCACACCTTAGAG | + |
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Preference number: 2 (lower is better) Translates to: ALCLGAPEESSGCLLLPETFHTA*SSHTLE Trigger: CTCTAAGGTGTGGGATGACCAAGCTGTGTGGAATGT...CTCTGGCAGAAGCAAACAACCTGAGCTTTCCTCTGGAGCCCCTAAGCAGAGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234779.2 ENSMUST00000234844.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTCACAGAGACGAGAGATGGCCTCAAGCTTGTGGGCACGCTCTCTGCTTAGGCAGGTTGTTTGCTTCTaGCAGAGAACGAAGATCAAA | + |
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Preference number: 2 (lower is better) Translates to: SSQRREMASSLWARSLLRQVVCF*QRTKIK Trigger: TTTGATCTTCGTTCTCTGGCAGAAGCAAACAACCTG...CCTAAGCAGAGAGCGTGCCCACAAGCTTGAGGCCATCTCTCGTCTCTGTGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234779.2 ENSMUST00000234844.2 |
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| 3UTR-3UTR CCA 90 bp | CCCACCAAGTGTGGAGGCGGGCTGAAGGCAGCCTCGATGAGGCTATTGTTAAAAATGGCATTCCCGATTTaGAGATGCATTCAACTCTGC | + |
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Preference number: 2 (lower is better) Translates to: PTKCGGGLKAASMRLLLKMAFPI*RCIQLC Trigger: GCAGAGTTGAATGCATCTCCAAATCGGGAATGCCAT...TTTTAACAATAGCCTCATCGAGGCTGCCTTCAGCCCGCCTCCACACTTGGTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 ENSMUST00000234779.2 ENSMUST00000234844.2 |
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| 3UTR-3UTR GCA 90 bp | GGTCCTTGTACTTGTCCTCACAGAGACGAGAGATGGCCTCAAGCTTGTGGGCACCAGGTTGTTTGCTTCTaGCAGAGAACGAAGATCAAA | + |
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Preference number: 2 (lower is better) Translates to: GPCTCPHRDERWPQACGHQVVCF*QRTKIK Trigger: TTTGATCTTCGTTCTCTGGCAGAAGCAAACAACCTG...GTGCCCACAAGCTTGAGGCCATCTCTCGTCTCTGTGAGGACAAGTACAAGGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234779.2 ENSMUST00000234844.2 |
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| 3UTR-3UTR CCA 90 bp | TGGTGGTTACAAACTATACTCTCTGCTCTGAGGAATCAAAACCCAACCAGAATATGCACCCACCAAGTGTaGAGGCGGGCTGAAGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: WWLQTILSALRNQNPTRICTHQV*RRAEGS Trigger: GCTGCCTTCAGCCCGCCTCCACACTTGGTGGGTGCA...TATTCTGGTTGGGTTTTGATTCCTCAGAGCAGAGAGTATAGTTTGTAACCACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 ENSMUST00000234779.2 |
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| 3UTR CAA 90 bp | ACCTTAGAGGCCAGCAGGATTGCCCCTAGAACAATGCGCTTCCAATaGGCTGGACAGATATCAATCTCTGCGTATGTCAAGAGCCTTTCA | + |
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Preference number: 2 (lower is better) Translates to: TLEASRIAPRTMRFQ*AGQISISAYVKSLS Trigger: TGAAAGGCTCTTGACATACGCAGAGATTGATATCTGTCCAGCCAATTGGAAGCGCATTGTTCTAGGGGCAATCCTGCTGGCCTCTAAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234779.2 ENSMUST00000234844.2 |
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| 3UTR-3UTR TCA 90 bp | ACACCAAGTTTCCTGAATACTGATTTCACGTCCCTTAAAGCCGCTCTGCGTGCAAACAAAAGGAGAAACTaGGGGACAGCACAGCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: TPSFLNTDFTSLKAALRANKRRN*GTAQPQ Trigger: CTGAGGCTGTGCTGTCCCTCAGTTTCTCCTTTTGTT...TGCACGCAGAGCGGCTTTAAGGGACGTGAAATCAGTATTCAGGAAACTTGGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 ENSMUST00000234779.2 ENSMUST00000234844.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGTCTGTTTCCTCCATGAAAGAAGTGCTTTTCATGATGGCCGGGAAGGCTTGAACAAAAGGAGAAACTaGGGGACAGCACAGCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: RVCFLHERSAFHDGREGLNKRRN*GTAQPQ Trigger: CTGAGGCTGTGCTGTCCCTCAGTTTCTCCTTTTGTT...CAAGCCTTCCCGGCCATCATGAAAAGCACTTCTTTCATGGAGGAAACAGACTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 ENSMUST00000234779.2 ENSMUST00000234844.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGTCTGTTTCCTCCATGAAAGAAGTGCTTTTCATGATGGCCGGGAAGGCTTGATCCCGAGAGCAGCATaGAGGAATGCAGGAAGTCTT | + |
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Preference number: 2 (lower is better) Translates to: RVCFLHERSAFHDGREGLIPRAA*RNAGSL Trigger: AAGACTTCCTGCATTCCTTCATGCTGCTCTCGGGAT...CAAGCCTTCCCGGCCATCATGAAAAGCACTTCTTTCATGGAGGAAACAGACTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 ENSMUST00000234779.2 |
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| 3UTR-3UTR CCA 90 bp | CCAAGTTTCCTGAATACTGATTTCACGTCCCTTAAAGCCGCTCTGCGTGCACCCCTGCTACCTATCATCTaGCTCCATCTGGTATCTATG | + |
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Preference number: 2 (lower is better) Translates to: PSFLNTDFTSLKAALRAPLLPII*LHLVSM Trigger: CATAGATACCAGATGGAGCCAGATGATAGGTAGCAG...GGGTGCACGCAGAGCGGCTTTAAGGGACGTGAAATCAGTATTCAGGAAACTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 ENSMUST00000234779.2 ENSMUST00000234844.2 |
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| 3UTR CAA 90 bp | TGTCAGCTGAGCAGCACTGAAGAGTGTCCGAACGAACCGGTAAATTaGCTTCTGTTCTGGGTTGTGTTTGTCATAATCAGGTGGCACTTC | + |
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Preference number: 2 (lower is better) Translates to: CQLSSTEECPNEPVN*LLFWVVFVIIRWHF Trigger: GAAGTGCCACCTGATTATGACAAACACAACCCAGAACAGAAGCAAATTTACCGGTTCGTTCGGACACTCTTCAGTGCTGCTCAGCTGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234779.2 ENSMUST00000234844.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGTCTGTTTCCTCCATGAAAGAAGTGCTTTTCATGATGGCCGGGAAGGCTTGTCCAAGGGCATAGCATaGCATTCCCGATTTGGAGAT | + |
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Preference number: 2 (lower is better) Translates to: RVCFLHERSAFHDGREGLSKGIA*HSRFGD Trigger: ATCTCCAAATCGGGAATGCCATGCTATGCCCTTGGA...CAAGCCTTCCCGGCCATCATGAAAAGCACTTCTTTCATGGAGGAAACAGACTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 ENSMUST00000234779.2 ENSMUST00000234844.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCACGCTCTCTGCTTAGGGGCTCCAGAGGAAAGCTCAGGTTGTTTGCTTCTGAATTTGCTTCTGTTCTaGGTTGTGTTTGTCATAATC | + |
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Preference number: 2 (lower is better) Translates to: GHALCLGAPEESSGCLLLNLLLF*VVFVII Trigger: GATTATGACAAACACAACCCAGAACAGAAGCAAATT...CAGAAGCAAACAACCTGAGCTTTCCTCTGGAGCCCCTAAGCAGAGAGCGTGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234779.2 ENSMUST00000234844.2 |
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| 3UTR-3UTR CCA 90 bp | AGGTTGTCAGCACTTGCTGAACGCTTCCTCATGGGTTTCCTCAGGTCCTTGTACCAATGCGCTTCCAATTaGCTGGACAGATATCAATCT | + |
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Preference number: 2 (lower is better) Translates to: RLSALAERFLMGFLRSLYQCASN*LDRYQS Trigger: AGATTGATATCTGTCCAGCCAATTGGAAGCGCATTG...GTACAAGGACCTGAGGAAACCCATGAGGAAGCGTTCAGCAAGTGCTGACAACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234779.2 ENSMUST00000234844.2 |
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| 3UTR-3UTR TCA 90 bp | CAGAAACAGCAAAGCTACCAAGTAATCTATCCCTTAACACAACTTCCTTTTCCTGCCCCAGTTAGGAGATaGTGGCTGGAGACCACCTTG | + |
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Preference number: 2 (lower is better) Translates to: QKQQSYQVIYPLTQLPFPAPVRR*WLETTL Trigger: CAAGGTGGTCTCCAGCCATCATCTCCTAACTGGGGC...AGGAAAAGGAAGTTGTGTTAAGGGATAGATTACTTGGTAGCTTTGCTGTTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000234779.2 ENSMUST00000234844.2 |
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| 3UTR-3UTR GCA 90 bp | GGTTGTCAGCACTTGCTGAACGCTTCCTCATGGGTTTCCTCAGGTCCTTGTACTAGCAATTCAAGAAACTaGCTCTCCAGTTCATTCATG | + |
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Preference number: 2 (lower is better) Translates to: GCQHLLNASSWVSSGPCTSNSRN*LSSSFM Trigger: CATGAATGAACTGGAGAGGCAGTTTCTTGAATTGCT...AGTACAAGGACCTGAGGAAACCCATGAGGAAGCGTTCAGCAAGTGCTGACAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234779.2 ENSMUST00000234844.2 |
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| 3UTR-3UTR CCA 90 bp | ACAAACATCCCCATCCCCAATCCCGAGAGCAGCATGAAGGAATGCAGGAAGTCTTTTGTCATAATCAGGTaGCACTTCGGATTTCGAAAG | + |
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Preference number: 2 (lower is better) Translates to: TNIPIPNPESSMKECRKSFVIIR*HFGFRK Trigger: CTTTCGAAATCCGAAGTGCCACCTGATTATGACAAA...AGACTTCCTGCATTCCTTCATGCTGCTCTCGGGATTGGGGATGGGGATGTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000234779.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTCTGCTCTGAGGAATCAAAACCCAACCAGAATAAAAATGAACAAACATCCCCACAGAGACGAGAGATaGCCTCAAGCTTGTGGGCAC | + |
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Preference number: 2 (lower is better) Translates to: LSALRNQNPTRIKMNKHPHRDER*PQACGH Trigger: GTGCCCACAAGCTTGAGGCCATCTCTCGTCTCTGTG...GGGATGTTTGTTCATTTTTATTCTGGTTGGGTTTTGATTCCTCAGAGCAGAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000234779.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTTGTACTTGTCCTCACAGAGACGAGAGATGGCCTCAAGCTTGTGGGCACGCGATTTCGAAAGAGGGTaGAGGTTTTCATCAAAAATA | + |
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Preference number: 2 (lower is better) Translates to: SLYLSSQRREMASSLWARDFERG*RFSSKI Trigger: TATTTTTGATGAAAACCTCCACCCTCTTTCGAAATC...GCGTGCCCACAAGCTTGAGGCCATCTCTCGTCTCTGTGAGGACAAGTACAAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234779.2 |
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| 3UTR CAA 90 bp | TGTTTCCTCCATGAAAGAAGTGCTTTTCATGATGGCCGGGAAGGCTaGACACCAAGTTTCCTGAATACTGATTTCACGTCCCTTAAAGCC | + |
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Preference number: 2 (lower is better) Translates to: CFLHERSAFHDGREG*TPSFLNTDFTSLKA Trigger: GGCTTTAAGGGACGTGAAATCAGTATTCAGGAAACTTGGTGTCAAGCCTTCCCGGCCATCATGAAAAGCACTTCTTTCATGGAGGAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 ENSMUST00000234779.2 ENSMUST00000234844.2 |
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| 3UTR CAA 90 bp | GGCTGCACTGAGATAGCATTCCCAAACAGCATCCAGCGTTACCTGTaGGACACCGAACTACTTTGCAAACAAGTTACAGTCACTATGATT | + |
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Preference number: 2 (lower is better) Translates to: GCTEIAFPNSIQRYL*DTELLCKQVTVTMI Trigger: AATCATAGTGACTGTAACTTGTTTGCAAAGTAGTTCGGTGTCCAACAGGTAACGCTGGATGCTGTTTGGGAATGCTATCTCAGTGCAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053917.6 |
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| 3UTR-3UTR CCA 90 bp | CACACCTTAGAGGCCAGCAGGATTGCCCCTAGAACAATGCGCTTCCAATTGGCTAATTTGCTTCTGTTCTaGGTTGTGTTTGTCATAATC | + |
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Preference number: 2 (lower is better) Translates to: HTLEASRIAPRTMRFQLANLLLF*VVFVII Trigger: GATTATGACAAACACAACCCAGAACAGAAGCAAATT...AGCCAATTGGAAGCGCATTGTTCTAGGGGCAATCCTGCTGGCCTCTAAGGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234779.2 ENSMUST00000234844.2 |
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| 3UTR-3UTR TCA 90 bp | ACAATCATGATTCAGTATTGCCACTCTGAAAACACTGTCCAATCTTATACCACCAACAAAAGGAGAAACTaGGGGACAGCACAGCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: TIMIQYCHSENTVQSYTTNKRRN*GTAQPQ Trigger: CTGAGGCTGTGCTGTCCCTCAGTTTCTCCTTTTGTT...GGTGGTATAAGATTGGACAGTGTTTTCAGAGTGGCAATACTGAATCATGATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053917.6 |
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| 3UTR-3UTR CCA 90 bp | ATGTTCTTGGAACTAGGCAGGAGAGGGATAGTTTTGGTTCAGTACTACAGTCAACTGCTACCTATCATCTaGCTCCATCTGGTATCTATG | + |
|
Preference number: 2 (lower is better) Translates to: MFLELGRRGIVLVQYYSQLLPII*LHLVSM Trigger: CATAGATACCAGATGGAGCCAGATGATAGGTAGCAG...TTGACTGTAGTACTGAACCAAAACTATCCCTCTCCTGCCTAGTTCCAAGAACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCTCTGCTCTGAGGAATCAAAACCCAACCAGAATAAAAATGAACAAACATCCCTCCAAGGGCATAGCATaGCATTCCCGATTTGGAGAT | + |
|
Preference number: 2 (lower is better) Translates to: LSALRNQNPTRIKMNKHPSKGIA*HSRFGD Trigger: ATCTCCAAATCGGGAATGCCATGCTATGCCCTTGGA...GGGATGTTTGTTCATTTTTATTCTGGTTGGGTTTTGATTCCTCAGAGCAGAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 ENSMUST00000234779.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCTCTGCTCTGAGGAATCAAAACCCAACCAGAATAAAAATGAACAAACATCCCGAGCATCCTTCCATCTaGGTCCCTGTTTTTGATGTG | + |
|
Preference number: 2 (lower is better) Translates to: LSALRNQNPTRIKMNKHPEHPSI*VPVFDV Trigger: CACATCAAAAACAGGGACCCAGATGGAAGGATGCTC...GGGATGTTTGTTCATTTTTATTCTGGTTGGGTTTTGATTCCTCAGAGCAGAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000234779.2 |
||
| 3UTR-3UTR TCA 90 bp | CAGACAAGGACCCAGAAACAGCAAAGCTACCAAGTAATCTATCCCTTAACACAAAGCACATCTTACTTGTaGGGAAGAAAGCTCAGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: QTRTQKQQSYQVIYPLTQSTSYL*GRKLRR Trigger: TCTTCTGAGCTTTCTTCCTCACAAGTAAGATGTGCT...TTGTGTTAAGGGATAGATTACTTGGTAGCTTTGCTGTTTCTGGGTCCTTGTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
||
| 3UTR-3UTR CCA 90 bp | AGAGTCTGTTTCCTCCATGAAAGAAGTGCTTTTCATGATGGCCGGGAAGGCTTGGATCAAAATAATACTTaGCATACACACTGGAAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: RVCFLHERSAFHDGREGLDQNNT*HTHWKE Trigger: TTCCTTCCAGTGTGTATGCCAAGTATTATTTTGATC...CAAGCCTTCCCGGCCATCATGAAAAGCACTTCTTTCATGGAGGAAACAGACTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000234779.2 ENSMUST00000234844.2 |
||
| 3UTR CAA 90 bp | AAACTGGAAGGCACAAGCACCCATATTAATCTAGATAGAATGTTCTaGGAACTAGGCAGGAGAGGGATAGTTTTGGTTCAGTACTACAGT | + |
|
Preference number: 2 (lower is better) Translates to: KLEGTSTHINLDRMF*ELGRRGIVLVQYYS Trigger: ACTGTAGTACTGAACCAAAACTATCCCTCTCCTGCCTAGTTCCAAGAACATTCTATCTAGATTAATATGGGTGCTTGTGCCTTCCAGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
||
| 3UTR-3UTR GCA 90 bp | TATACTCTCTGCTCTGAGGAATCAAAACCCAACCAGAATAAAAATGAACAAACATGTGCTGAGGACCTTTaGCTTCAGCCACAAAGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: YTLCSEESKPNQNKNEQTCAEDL*LQPQSL Trigger: CAGACTTTGTGGCTGAAGGCAAAGGTCCTCAGCACA...TGTTTGTTCATTTTTATTCTGGTTGGGTTTTGATTCCTCAGAGCAGAGAGTATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGAAACAGCAAAGCTACCAAGTAATCTATCCCTTAACACAACTTCCTTTTCCTCTGCTACCTATCATCTaGCTCCATCTGGTATCTATG | + |
|
Preference number: 2 (lower is better) Translates to: QKQQSYQVIYPLTQLPFPLLPII*LHLVSM Trigger: CATAGATACCAGATGGAGCCAGATGATAGGTAGCAG...AGGAAAAGGAAGTTGTGTTAAGGGATAGATTACTTGGTAGCTTTGCTGTTTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 ENSMUST00000234779.2 ENSMUST00000234844.2 |
||
| 3UTR-3UTR CCA 90 bp | CCACAAAGTCTGAGTGCGTTTTGTAATTACACCTTCATGTTAGCAGAAAAAGAGATGGCATTCCCGATTTaGAGATGCATTCAACTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: PQSLSAFCNYTFMLAEKEMAFPI*RCIQLC Trigger: GCAGAGTTGAATGCATCTCCAAATCGGGAATGCCAT...CTCTTTTTCTGCTAACATGAAGGTGTAATTACAAAACGCACTCAGACTTTGTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGACAAGGACCCAGAAACAGCAAAGCTACCAAGTAATCTATCCCTTAACACAATTTGTCATAATCAGGTaGCACTTCGGATTTCGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: QTRTQKQQSYQVIYPLTQFVIIR*HFGFRK Trigger: CTTTCGAAATCCGAAGTGCCACCTGATTATGACAAA...TTGTGTTAAGGGATAGATTACTTGGTAGCTTTGCTGTTTCTGGGTCCTTGTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234779.2 ENSMUST00000234844.2 |
||
| 3UTR-3UTR CCA 90 bp | GCCATGGTGGTTACAAACTATACTCTCTGCTCTGAGGAATCAAAACCCAACCAGGATCAAAATAATACTTaGCATACACACTGGAAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: AMVVTNYTLCSEESKPNQDQNNT*HTHWKE Trigger: TTCCTTCCAGTGTGTATGCCAAGTATTATTTTGATC...CTGGTTGGGTTTTGATTCCTCAGAGCAGAGAGTATAGTTTGTAACCACCATGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234779.2 |
||
| 3UTR-3UTR GCA 90 bp | CAGACAAGGACCCAGAAACAGCAAAGCTACCAAGTAATCTATCCCTTAACACAATTATTTGGATGTCTGTaGCATGGTGGTTACAAACTA | + |
|
Preference number: 2 (lower is better) Translates to: QTRTQKQQSYQVIYPLTQLFGCL*HGGYKL Trigger: TAGTTTGTAACCACCATGGCACAGACATCCAAATAA...TTGTGTTAAGGGATAGATTACTTGGTAGCTTTGCTGTTTCTGGGTCCTTGTCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 ENSMUST00000234779.2 |
||
| 3UTR CAA 90 bp | ATTCCCAAACAGCATCCAGCGTTACCTGTTGGACACCGAACTACTTaGCAAACAAGTTACAGTCACTATGATTTATCAACACTACTATTA | + |
|
Preference number: 2 (lower is better) Translates to: IPKQHPALPVGHRTT*QTSYSHYDLSTLLL Trigger: TAATAGTAGTGTTGATAAATCATAGTGACTGTAACTTGTTTGCAAAGTAGTTCGGTGTCCAACAGGTAACGCTGGATGCTGTTTGGGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053917.6 |
||
| 3UTR-3UTR GCA 90 bp | CATATTAATCTAGATAGAATGTTCTTGGAACTAGGCAGGAGAGGGATAGTTTTGAGCAGCATGAAGGAATaGAGGAAGTCTTTCTTACAG | + |
|
Preference number: 2 (lower is better) Translates to: HINLDRMFLELGRRGIVLSSMKE*RKSFLQ Trigger: CTGTAAGAAAGACTTCCTGCATTCCTTCATGCTGCT...CAAAACTATCCCTCTCCTGCCTAGTTCCAAGAACATTCTATCTAGATTAATATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
||
| 3UTR-3UTR GCA 90 bp | AAGCTTATAATATGGCCCCAGGTTGCTGTCCCTAAAGCAGCAAGAATATGCAAAATTCAAGGAGAATATTaGTTACAACAATGGACATGG | + |
|
Preference number: 2 (lower is better) Translates to: KLIIWPQVAVPKAARICKIQGEY*LQQWTW Trigger: CCATGTCCATTGTTGTAAGCAATATTCTCCTTGAAT...TTTGCATATTCTTGCTGCTTTAGGGACAGCAACCTGGGGCCATATTATAAGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053917.6 |
||
| 3UTR CAA 90 bp | AATCTAGATAGAATGTTCTTGGAACTAGGCAGGAGAGGGATAGTTTaGGTTCAGTACTACAGTCAAGTTAATCCTGCTATTGTTGAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: NLDRMFLELGRRGIV*VQYYSQVNPAIVER Trigger: TCTTTCAACAATAGCAGGATTAACTTGACTGTAGTACTGAACCAAAACTATCCCTCTCCTGCCTAGTTCCAAGAACATTCTATCTAGATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
||
| 3UTR-3UTR GCA 90 bp | ACTATACTCTCTGCTCTGAGGAATCAAAACCCAACCAGAATAAAAATGAACAAAAGCAGCATGAAGGAATaGAGGAAGTCTTTCTTACAG | + |
|
Preference number: 2 (lower is better) Translates to: TILSALRNQNPTRIKMNKSSMKE*RKSFLQ Trigger: CTGTAAGAAAGACTTCCTGCATTCCTTCATGCTGCT...TTTGTTCATTTTTATTCTGGTTGGGTTTTGATTCCTCAGAGCAGAGAGTATAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 ENSMUST00000234779.2 |
||
| 3UTR-3UTR GCA 90 bp | CATATTAATCTAGATAGAATGTTCTTGGAACTAGGCAGGAGAGGGATAGTTTTGACAAACTATACTCTCTaGTCTGAGGAATCAAAACCC | + |
|
Preference number: 2 (lower is better) Translates to: HINLDRMFLELGRRGIVLTNYTL*SEESKP Trigger: GGGTTTTGATTCCTCAGAGCAGAGAGTATAGTTTGT...CAAAACTATCCCTCTCCTGCCTAGTTCCAAGAACATTCTATCTAGATTAATATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
||
| 3UTR GCA 72 bp | GACGAGAGATGGCCTCAAGCTTGTGGGCACGCTCTCTaGTTAGGGGCTCCAGAGGAAAGCTCAGGTTGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: DERWPQACGHAL*LGAPEESSGCL Trigger: CAAACAACCTGAGCTTTCCTCTGGAGCCCCTAAGCAGAGAGCGTGCCCACAAGCTTGAGGCCATCTCTCGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234779.2 ENSMUST00000234844.2 |
||
| 3UTR TCA 72 bp | ACAGCACAGCCTCAGGAGAGTGCCCCAGTTAGGAGATaGTGGCTGGAGACCACCTTGGCAGAATCAGGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: TAQPQESAPVRR*WLETTLAESGC Trigger: ACAACCTGATTCTGCCAAGGTGGTCTCCAGCCATCATCTCCTAACTGGGGCACTCTCCTGAGGCTGTGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234779.2 ENSMUST00000234844.2 |
||
| 3UTR CCA 72 bp | AGCCTCAGGAGAGTGCCCCAGTTAGGAGATGATGGCTaGAGACCACCTTGGCAGAATCAGGTTGTCAGCACT | + |
|
Preference number: 3 (lower is better) Translates to: SLRRVPQLGDDG*RPPWQNQVVST Trigger: AGTGCTGACAACCTGATTCTGCCAAGGTGGTCTCCAGCCATCATCTCCTAACTGGGGCACTCTCCTGAGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234779.2 ENSMUST00000234844.2 |
||
| 3UTR-3UTR CAA 90 bp | GGACAGCACAGCCTCAGGAGAGTGCCCCAGTTAGGAGATGATGGCTGGAGACCAGAAAGCTCAGGTTGTTaGCTTCTGCCAGAGAACGAA | + |
|
Preference number: 3 (lower is better) Translates to: GQHSLRRVPQLGDDGWRPESSGC*LLPENE Trigger: TTCGTTCTCTGGCAGAAGCAAACAACCTGAGCTTTC...TGGTCTCCAGCCATCATCTCCTAACTGGGGCACTCTCCTGAGGCTGTGCTGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234779.2 ENSMUST00000234844.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCAGGTCCTTGTACTTGTCCTCACAGAGACGAGAGATGGCCTCAAGCTTGTGGGAAAGCTCAGGTTGTTaGCTTCTGCCAGAGAACGAA | + |
|
Preference number: 3 (lower is better) Translates to: LRSLYLSSQRREMASSLWESSGC*LLPENE Trigger: TTCGTTCTCTGGCAGAAGCAAACAACCTGAGCTTTC...CCACAAGCTTGAGGCCATCTCTCGTCTCTGTGAGGACAAGTACAAGGACCTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234779.2 ENSMUST00000234844.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAAGTTTCCTGAATACTGATTTCACGTCCCTTAAAGCCGCTCTGCGTGCACCCGGTTTCCTCAGGTCCTaGTACTTGTCCTCACAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: PSFLNTDFTSLKAALRAPGFLRS*YLSSQR Trigger: TCTCTGTGAGGACAAGTACAAGGACCTGAGGAAACC...GGGTGCACGCAGAGCGGCTTTAAGGGACGTGAAATCAGTATTCAGGAAACTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234779.2 ENSMUST00000234844.2 |
||
| 3UTR TCA 72 bp | AGACCACCTTGGCAGAATCAGGTTGTCAGCACTTGCTaGACGCTTCCTCATGGGTTTCCTCAGGTCCTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: RPPWQNQVVSTC*TLPHGFPQVLV Trigger: TACAAGGACCTGAGGAAACCCATGAGGAAGCGTTCAGCAAGTGCTGACAACCTGATTCTGCCAAGGTGGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234779.2 ENSMUST00000234844.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGTCAGCACTTGCTGAACGCTTCCTCATGGGTTTCCTCAGGTCCTTGTACTTGGGTTTCCTCAGGTCCTaGTACTTGTCCTCACAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: LSALAERFLMGFLRSLYLGFLRS*YLSSQR Trigger: TCTCTGTGAGGACAAGTACAAGGACCTGAGGAAACC...CAAGTACAAGGACCTGAGGAAACCCATGAGGAAGCGTTCAGCAAGTGCTGACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234779.2 ENSMUST00000234844.2 |
||
| 3UTR GCA 72 bp | AGCTTGCTTCTGGGAGGGCATTCTGGTGCTGCTCTGTaGTCTGCATTCAGTAAGGCTGAACTGTTATTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: SLLLGGHSGAAL*SAFSKAELLFL Trigger: TAGGAATAACAGTTCAGCCTTACTGAATGCAGAGCACAGAGCAGCACCAGAATGCCCTCCCAGAAGCAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053917.6 |
||
| 3UTR CCA 72 bp | GAAAACCTCACAAACCTCGGTCACCGCAACCTAAGATaGGCAGAAGCAAAGCACTTGTGTGTGACTCAGACT | + |
|
Preference number: 3 (lower is better) Translates to: ENLTNLGHRNLR*AEAKHLCVTQT Trigger: AGTCTGAGTCACACACAAGTGCTTTGCTTCTGCCCATCTTAGGTTGCGGTGACCGAGGTTTGTGAGGTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053917.6 |
||
| 3UTR-3UTR CAA 90 bp | TCTCTGCTTAGGGGCTCCAGAGGAAAGCTCAGGTTGTTTGCTTCTGCCAGAGAAACAATGCGCTTCCAATaGGCTGGACAGATATCAATC | + |
|
Preference number: 3 (lower is better) Translates to: SLLRGSRGKLRLFASARETMRFQ*AGQISI Trigger: GATTGATATCTGTCCAGCCAATTGGAAGCGCATTGT...TTCTCTGGCAGAAGCAAACAACCTGAGCTTTCCTCTGGAGCCCCTAAGCAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234779.2 ENSMUST00000234844.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCCTCATGGGTTTCCTCAGGTCCTTGTACTTGTCCTCACAGAGACGAGAGATGAGAGGAAAGCTCAGGTaGTTTGCTTCTGCCAGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: FLMGFLRSLYLSSQRREMRGKLR*FASARE Trigger: TTCTCTGGCAGAAGCAAACAACCTGAGCTTTCCTCT...CATCTCTCGTCTCTGTGAGGACAAGTACAAGGACCTGAGGAAACCCATGAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234779.2 ENSMUST00000234844.2 |
||
| 3UTR GCA 72 bp | TCCTTCAACAATGACAACGAGCTCTTTACCAGAGGCTaGACTGAGATAGCATTCCCAAACAGCATCCAGCGT | + |
|
Preference number: 3 (lower is better) Translates to: SFNNDNELFTRG*TEIAFPNSIQR Trigger: ACGCTGGATGCTGTTTGGGAATGCTATCTCAGTGCAGCCTCTGGTAAAGAGCTCGTTGTCATTGTTGAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053917.6 |
||
| 3UTR CCA 72 bp | CACAGATTCCAAGGGCATAGCATGGCATTCCCGATTTaGAGATGCATTCAACTCTGCTACCTATCATCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: HRFQGHSMAFPI*RCIQLCYLSSG Trigger: GCCAGATGATAGGTAGCAGAGTTGAATGCATCTCCAAATCGGGAATGCCATGCTATGCCCTTGGAATCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 ENSMUST00000234779.2 ENSMUST00000234844.2 |
||
| 3UTR CCA 72 bp | CCAGCAGGATTGCCCCTAGAACAATGCGCTTCCAATTaGCTGGACAGATATCAATCTCTGCGTATGTCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: PAGLPLEQCASN*LDRYQSLRMSR Trigger: TCTTGACATACGCAGAGATTGATATCTGTCCAGCCAATTGGAAGCGCATTGTTCTAGGGGCAATCCTGCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234779.2 ENSMUST00000234844.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAAACATCCCCATCCCCAATCCCGAGAGCAGCATGAAGGAATGCAGGAAGTCTGCCTCGATGAGGCTATaGTTAAAAACAGAAGGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: TNIPIPNPESSMKECRKSASMRL*LKTEGK Trigger: TTTTCCTTCTGTTTTTAACAATAGCCTCATCGAGGC...AGACTTCCTGCATTCCTTCATGCTGCTCTCGGGATTGGGGATGGGGATGTTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 ENSMUST00000234779.2 |
||
| 3UTR TCA 72 bp | CCATTCATGTTTGTAAGAACTGCCAAGGCTCAGTCTTaGGATATCCACTCCACTGAGGACCAGGACATAGTG | + |
|
Preference number: 3 (lower is better) Translates to: PFMFVRTAKAQS*DIHSTEDQDIV Trigger: CACTATGTCCTGGTCCTCAGTGGAGTGGATATCTCAAGACTGAGCCTTGGCAGTTCTTACAAACATGAATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053917.6 |
||
| 3UTR CCA 72 bp | GATTTGGAGATGCATTCAACTCTGCTACCTATCATCTaGCTCCATCTGGTATCTATGACCAGACAAGGACCC | + |
|
Preference number: 3 (lower is better) Translates to: DLEMHSTLLPII*LHLVSMTRQGP Trigger: GGGTCCTTGTCTGGTCATAGATACCAGATGGAGCCAGATGATAGGTAGCAGAGTTGAATGCATCTCCAAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 ENSMUST00000234779.2 ENSMUST00000234844.2 |
||
| 3UTR TCA 72 bp | TTCTGCTTTGACACTCAGGTAAGCAGCAAAATTCCCTaGAGCAAGGGAAACACCAAGTTGGAGATATCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: FCFDTQVSSKIP*SKGNTKLEISQ Trigger: CTGGGATATCTCCAACTTGGTGTTTCCCTTGCTTCAGGGAATTTTGCTGCTTACCTGAGTGTCAAAGCAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053917.6 |
||
| 3UTR GCA 72 bp | TGCTTCTCTATCCAAGATGCTTGTGCTGAGGACCTTTaGCTTCAGCCACAAAGTCTGAGTGCGTTTTGTAAT | + |
|
Preference number: 3 (lower is better) Translates to: CFSIQDACAEDL*LQPQSLSAFCN Trigger: ATTACAAAACGCACTCAGACTTTGTGGCTGAAGGCAAAGGTCCTCAGCACAAGCATCTTGGATAGAGAAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
||
| 3UTR-3UTR CAA 90 bp | CTAGAACAATGCGCTTCCAATTGGCTGGACAGATATCAATCTCTGCGTATGTCAAACGAACCGGTAAATTaGCTTCTGTTCTGGGTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: LEQCASNWLDRYQSLRMSNEPVN*LLFWVV Trigger: CACAACCCAGAACAGAAGCAAATTTACCGGTTCGTT...TGACATACGCAGAGATTGATATCTGTCCAGCCAATTGGAAGCGCATTGTTCTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234779.2 ENSMUST00000234844.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGACAAGGACCCAGAAACAGCAAAGCTACCAAGTAATCTATCCCTTAACACAAACAATGCGCTTCCAATaGGCTGGACAGATATCAATC | + |
|
Preference number: 3 (lower is better) Translates to: QTRTQKQQSYQVIYPLTQTMRFQ*AGQISI Trigger: GATTGATATCTGTCCAGCCAATTGGAAGCGCATTGT...TTGTGTTAAGGGATAGATTACTTGGTAGCTTTGCTGTTTCTGGGTCCTTGTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234779.2 ENSMUST00000234844.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTTCCAATTGGCTGGACAGATATCAATCTCTGCGTATGTCAAGAGCCTTTCAAGCCTCGATGAGGCTATaGTTAAAAACAGAAGGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: ASNWLDRYQSLRMSRAFQASMRL*LKTEGK Trigger: TTTTCCTTCTGTTTTTAACAATAGCCTCATCGAGGC...TTGAAAGGCTCTTGACATACGCAGAGATTGATATCTGTCCAGCCAATTGGAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000234779.2 ENSMUST00000234844.2 |
||
| 3UTR-3UTR CAA 90 bp | CCACAAAGTCTGAGTGCGTTTTGTAATTACACCTTCATGTTAGCAGAAAAAGAGCTAGATAGAATGTTCTaGGAACTAGGCAGGAGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: PQSLSAFCNYTFMLAEKELDRMF*ELGRRG Trigger: CCCTCTCCTGCCTAGTTCCAAGAACATTCTATCTAG...CTCTTTTTCTGCTAACATGAAGGTGTAATTACAAAACGCACTCAGACTTTGTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGACAAGGACCCAGAAACAGCAAAGCTACCAAGTAATCTATCCCTTAACACAAACCAAGAACAACCAATaGCAAGAAAACTGGAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: QTRTQKQQSYQVIYPLTQTKNNQ*QENWKA Trigger: TGCCTTCCAGTTTTCTTGCAATTGGTTGTTCTTGGT...TTGTGTTAAGGGATAGATTACTTGGTAGCTTTGCTGTTTCTGGGTCCTTGTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGAAACAGCAAAGCTACCAAGTAATCTATCCCTTAACACAACTTCCTTTTCCTAACGAACCGGTAAATTaGCTTCTGTTCTGGGTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: QKQQSYQVIYPLTQLPFPNEPVN*LLFWVV Trigger: CACAACCCAGAACAGAAGCAAATTTACCGGTTCGTT...AGGAAAAGGAAGTTGTGTTAAGGGATAGATTACTTGGTAGCTTTGCTGTTTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234779.2 ENSMUST00000234844.2 |
||
| 3UTR-3UTR CAA 90 bp | CCACAAAGTCTGAGTGCGTTTTGTAATTACACCTTCATGTTAGCAGAAAAAGAGAGGAGAGGGATAGTTTaGGTTCAGTACTACAGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: PQSLSAFCNYTFMLAEKERRGIV*VQYYSQ Trigger: TTGACTGTAGTACTGAACCAAAACTATCCCTCTCCT...CTCTTTTTCTGCTAACATGAAGGTGTAATTACAAAACGCACTCAGACTTTGTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCAAAAGGAATAAAGTTCCCTGCCCACAAACAAATCACAAAAGGATACAAGATATGAACCTTCACAGTTaGTGTAGCTTCTCCAAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: LKRNKVPCPQTNHKRIQDMNLHS*CSFSKH Trigger: GTGCTTGGAGAAGCTACACAAACTGTGAAGGTTCAT...ATCTTGTATCCTTTTGTGATTTGTTTGTGGGCAGGGAACTTTATTCCTTTTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053917.6 |
||
| 3UTR TCA 72 bp | CAGAAAACACAAAAGCTGGTTATAAGTAAGGAAGTATaGACCTTCACAGTTTGTGTAGCTTCTCCAAGCACC | + |
|
Preference number: 3 (lower is better) Translates to: QKTQKLVISKEV*TFTVCVASPST Trigger: GGTGCTTGGAGAAGCTACACAAACTGTGAAGGTTCATACTTCCTTACTTATAACCAGCTTTTGTGTTTTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053917.6 |
||
| 3UTR GCA 72 bp | GATGTCTGTGCCATGGTGGTTACAAACTATACTCTCTaGTCTGAGGAATCAAAACCCAACCAGAATAAAAAT | + |
|
Preference number: 3 (lower is better) Translates to: DVCAMVVTNYTL*SEESKPNQNKN Trigger: ATTTTTATTCTGGTTGGGTTTTGATTCCTCAGAGCAGAGAGTATAGTTTGTAACCACCATGGCACAGACATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 ENSMUST00000234779.2 |
||
| 3UTR TCA 72 bp | GCTCATATTGCATCCAAAACTGCACAAGAACTGCACTaGCTCTTTACTAACATTTGTGGCTTCATACTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: AHIASKTAQELH*LFTNICGFILL Trigger: CAAAAGTATGAAGCCACAAATGTTAGTAAAGAGTCAGTGCAGTTCTTGTGCAGTTTTGGATGCAATATGAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053917.6 |
||
| 3UTR CCA 72 bp | ACCTATAAATCTCAAATGCCATTCAGTCAGACATGTTaGAGGGCATTTCTTAGTATAAACAGGTTCTTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: TYKSQMPFSQTC*RAFLSINRFLE Trigger: CTCCAAGAACCTGTTTATACTAAGAAATGCCCTCCAACATGTCTGACTGAATGGCATTTGAGATTTATAGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053917.6 |
||
| 3UTR CCA 72 bp | TCCCTGCCCACAAACAAATCACAAAAGGATACAAGATaGTTTACTAGGACCTATAAATCTCAAATGCCATTC | + |
|
Preference number: 3 (lower is better) Translates to: SLPTNKSQKDTR*FTRTYKSQMPF Trigger: GAATGGCATTTGAGATTTATAGGTCCTAGTAAACCATCTTGTATCCTTTTGTGATTTGTTTGTGGGCAGGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053917.6 |
||
| 3UTR-3UTR CAA 90 bp | CTCAAAAGGAATAAAGTTCCCTGCCCACAAACAAATCACAAAAGGATACAAGATGCCTCGATGAGGCTATaGTTAAAAACAGAAGGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: LKRNKVPCPQTNHKRIQDASMRL*LKTEGK Trigger: TTTTCCTTCTGTTTTTAACAATAGCCTCATCGAGGC...ATCTTGTATCCTTTTGTGATTTGTTTGTGGGCAGGGAACTTTATTCCTTTTGAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000053917.6 |
||
| 3UTR TCA 72 bp | AGAATATGCAAAATCATAACTCACCAAATTCTGCTTTaGCACTCAGGTAAGCAGCAAAATTCCCTGAAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: RICKIITHQILL*HSGKQQNSLKQ Trigger: TTGCTTCAGGGAATTTTGCTGCTTACCTGAGTGTCAAAGCAGAATTTGGTGAGTTATGATTTTGCATATTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053917.6 |
||
| 3UTR GCA 72 bp | AATTTGCTCATATTGCATCCAAAACTGCACAAGAACTaGACTGACTCTTTACTAACATTTGTGGCTTCATAC | + |
|
Preference number: 3 (lower is better) Translates to: NLLILHPKLHKN*TDSLLTFVASY Trigger: GTATGAAGCCACAAATGTTAGTAAAGAGTCAGTGCAGTTCTTGTGCAGTTTTGGATGCAATATGAGCAAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053917.6 |
||
| 3UTR GCA 72 bp | ATACAAGATGGTTTACTAGGACCTATAAATCTCAAATaGCATTCAGTCAGACATGTTGGAGGGCATTTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: IQDGLLGPINLK*HSVRHVGGHFL Trigger: TAAGAAATGCCCTCCAACATGTCTGACTGAATGGCATTTGAGATTTATAGGTCCTAGTAAACCATCTTGTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053917.6 |
||
| CDS-3UTR CCA 90 bp | TCCTCACAGAGACGAGAGATGGCCTCAAGCTTGTGGGCACGCTCTCTGCTTAGGTCCGGAGCTTGGGGCTaGACGACACGCAGCACGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSQRREMASSLWARSLLRSGAWG*TTRSTK Trigger: CTTCGTGCTGCGTGTCGTCCAGCCCCAAGCTCCGGA...CCTAAGCAGAGAGCGTGCCCACAAGCTTGAGGCCATCTCTCGTCTCTGTGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234844.2 |
||
| 3UTR CAA 72 bp | TACTTGTCCTCACAGAGACGAGAGATGGCCTCAAGCTaGTGGGCACGCTCTCTGCTTAGGGGCTCCAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: YLSSQRREMASS*WARSLLRGSRG Trigger: TCCTCTGGAGCCCCTAAGCAGAGAGCGTGCCCACAAGCTTGAGGCCATCTCTCGTCTCTGTGAGGACAAGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234779.2 ENSMUST00000234844.2 |
||
| CDS-3UTR TCA 90 bp | CTCAGGTCCTTGTACTTGTCCTCACAGAGACGAGAGATGGCCTCAAGCTTGTGGTGTTTTCCCGGTCGCTaGTGTGCTGCAGATTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LRSLYLSSQRREMASSLWCFPGR*CAADCS Trigger: GCTGCAATCTGCAGCACATCAGCGACCGGGAAAACA...CCACAAGCTTGAGGCCATCTCTCGTCTCTGTGAGGACAAGTACAAGGACCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234844.2 |
||
| 3UTR CAA 72 bp | CTGACTTCCTTGTCTCTAATGGAGCTGTCAGGTAGCTaGCTTCTGGGAGGGCATTCTGGTGCTGCTCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LTSLSLMELSGS*LLGGHSGAALC Trigger: GCACAGAGCAGCACCAGAATGCCCTCCCAGAAGCAAGCTACCTGACAGCTCCATTAGAGACAAGGAAGTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053917.6 |
||
| CDS-3UTR TCA 90 bp | CCAAGTTTCCTGAATACTGATTTCACGTCCCTTAAAGCCGCTCTGCGTGCACCCTGTTTTCCCGGTCGCTaGTGTGCTGCAGATTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PSFLNTDFTSLKAALRAPCFPGR*CAADCS Trigger: GCTGCAATCTGCAGCACATCAGCGACCGGGAAAACA...GGGTGCACGCAGAGCGGCTTTAAGGGACGTGAAATCAGTATTCAGGAAACTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 ENSMUST00000234844.2 |
||
| CDS-3UTR TCA 90 bp | CCAAGTTTCCTGAATACTGATTTCACGTCCCTTAAAGCCGCTCTGCGTGCACCCTCAGCTGAGCAGCACTaGAGAGTGTCCGAACGAACC | + |
|
Preference number: 4 (lower is better) Translates to: PSFLNTDFTSLKAALRAPSAEQH*RVSERT Trigger: GGTTCGTTCGGACACTCTTCAGTGCTGCTCAGCTGA...GGGTGCACGCAGAGCGGCTTTAAGGGACGTGAAATCAGTATTCAGGAAACTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
||
| 3UTR CAA 72 bp | GAACGCTTCCTCATGGGTTTCCTCAGGTCCTTGTACTaGTCCTCACAGAGACGAGAGATGGCCTCAAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ERFLMGFLRSLY*SSQRREMASSL Trigger: CAAGCTTGAGGCCATCTCTCGTCTCTGTGAGGACAAGTACAAGGACCTGAGGAAACCCATGAGGAAGCGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234779.2 ENSMUST00000234844.2 |
||
| 3UTR CAA 72 bp | CTTGCTGAACGCTTCCTCATGGGTTTCCTCAGGTCCTaGTACTTGTCCTCACAGAGACGAGAGATGGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LAERFLMGFLRS*YLSSQRREMAS Trigger: TGAGGCCATCTCTCGTCTCTGTGAGGACAAGTACAAGGACCTGAGGAAACCCATGAGGAAGCGTTCAGCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234779.2 ENSMUST00000234844.2 |
||
| 3UTR CAA 72 bp | GAGATGATGGCTGGAGACCACCTTGGCAGAATCAGGTaGTCAGCACTTGCTGAACGCTTCCTCATGGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: EMMAGDHLGRIR*SALAERFLMGF Trigger: GAAACCCATGAGGAAGCGTTCAGCAAGTGCTGACAACCTGATTCTGCCAAGGTGGTCTCCAGCCATCATCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234779.2 ENSMUST00000234844.2 |
||
| CDS-3UTR GCA 90 bp | TCTGTTCTGGGTTGTGTTTGTCATAATCAGGTGGCACTTCGGATTTCGAAAGAGGACTCCAGCCGCGAGTaGGCATTCCTCCGGAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SVLGCVCHNQVALRISKEDSSRE*AFLRSL Trigger: CAAGCTCCGGAGGAATGCGCACTCGCGGCTGGAGTC...CTCTTTCGAAATCCGAAGTGCCACCTGATTATGACAAACACAACCCAGAACAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234844.2 |
||
| CDS-3UTR GCA 90 bp | AGAGTCTGTTTCCTCCATGAAAGAAGTGCTTTTCATGATGGCCGGGAAGGCTTGTCCCGGTCGCTGATGTaGTGCAGATTGCAGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RVCFLHERSAFHDGREGLSRSLM*CRLQPV Trigger: CACTGGCTGCAATCTGCAGCACATCAGCGACCGGGA...CAAGCCTTCCCGGCCATCATGAAAAGCACTTCTTTCATGGAGGAAACAGACTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 ENSMUST00000234844.2 |
||
| CDS-3UTR GCA 90 bp | ACACCAAGTTTCCTGAATACTGATTTCACGTCCCTTAAAGCCGCTCTGCGTGCATCCCGGTCGCTGATGTaGTGCAGATTGCAGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TPSFLNTDFTSLKAALRASRSLM*CRLQPV Trigger: CACTGGCTGCAATCTGCAGCACATCAGCGACCGGGA...TGCACGCAGAGCGGCTTTAAGGGACGTGAAATCAGTATTCAGGAAACTTGGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 ENSMUST00000234844.2 |
||
| CDS-3UTR CCA 90 bp | AAGGAAAACCTCACAAACCTCGGTCACCGCAACCTAAGATGGGCAGAAGCAAAGGGCTGGAGACCACCTTaGCAGAATCAGGTTGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KENLTNLGHRNLRWAEAKGWRPP*QNQVVS Trigger: GCTGACAACCTGATTCTGCCAAGGTGGTCTCCAGCC...CTTTGCTTCTGCCCATCTTAGGTTGCGGTGACCGAGGTTTGTGAGGTTTTCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053917.6 |
||
| CDS-3UTR TCA 90 bp | ACACCAAGTTTCCTGAATACTGATTTCACGTCCCTTAAAGCCGCTCTGCGTGCATCAGCTGAGCAGCACTaGAGAGTGTCCGAACGAACC | + |
|
Preference number: 4 (lower is better) Translates to: TPSFLNTDFTSLKAALRASAEQH*RVSERT Trigger: GGTTCGTTCGGACACTCTTCAGTGCTGCTCAGCTGA...TGCACGCAGAGCGGCTTTAAGGGACGTGAAATCAGTATTCAGGAAACTTGGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
||
| CDS-3UTR TCA 90 bp | GGACAGCACAGCCTCAGGAGAGTGCCCCAGTTAGGAGATGATGGCTGGAGACCAGATGGTCTGAAGGATTaGATTCCATGTTTAAATCGT | + |
|
Preference number: 4 (lower is better) Translates to: GQHSLRRVPQLGDDGWRPDGLKD*IPCLNR Trigger: ACGATTTAAACATGGAATTCAATCCTTCAGACCATC...TGGTCTCCAGCCATCATCTCCTAACTGGGGCACTCTCCTGAGGCTGTGCTGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234844.2 |
||
| CDS-3UTR TCA 90 bp | TTCCTCATGGGTTTCCTCAGGTCCTTGTACTTGTCCTCACAGAGACGAGAGATGGGCCCGAGGATGGTCTaGAGGATTGAATTCCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: FLMGFLRSLYLSSQRREMGPRMV*RIEFHV Trigger: AACATGGAATTCAATCCTTCAGACCATCCTCGGGCC...CATCTCTCGTCTCTGTGAGGACAAGTACAAGGACCTGAGGAAACCCATGAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234779.2 ENSMUST00000234844.2 |
||
| CDS-3UTR CCA 90 bp | AATGCTAGAATTTATCTCAAACAAGGAAAACCTCACAAACCTCGGTCACCGCAATCCGGAGCTTGGGGCTaGACGACACGCAGCACGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NARIYLKQGKPHKPRSPQSGAWG*TTRSTK Trigger: CTTCGTGCTGCGTGTCGTCCAGCCCCAAGCTCCGGA...TTGCGGTGACCGAGGTTTGTGAGGTTTTCCTTGTTTGAGATAAATTCTAGCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053917.6 |
||
| CDS-3UTR CCA 90 bp | ATGCAGGAAGTCTTTCTTACAGAGCACACAGATTCCAAGGGCATAGCATGGCATCACAGAGACGAGAGATaGCCTCAAGCTTGTGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: MQEVFLTEHTDSKGIAWHHRDER*PQACGH Trigger: GTGCCCACAAGCTTGAGGCCATCTCTCGTCTCTGTG...ATGCCATGCTATGCCCTTGGAATCTGTGTGCTCTGTAAGAAAGACTTCCTGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
||
| 3UTR CAA 72 bp | GCCAGCAGGATTGCCCCTAGAACAATGCGCTTCCAATaGGCTGGACAGATATCAATCTCTGCGTATGTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: ASRIAPRTMRFQ*AGQISISAYVK Trigger: CTTGACATACGCAGAGATTGATATCTGTCCAGCCAATTGGAAGCGCATTGTTCTAGGGGCAATCCTGCTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234779.2 ENSMUST00000234844.2 |
||
| CDS-3UTR GCA 90 bp | AAGCTTATAATATGGCCCCAGGTTGCTGTCCCTAAAGCAGCAAGAATATGCAAATCCCGGTCGCTGATGTaGTGCAGATTGCAGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: KLIIWPQVAVPKAARICKSRSLM*CRLQPV Trigger: CACTGGCTGCAATCTGCAGCACATCAGCGACCGGGA...TTTGCATATTCTTGCTGCTTTAGGGACAGCAACCTGGGGCCATATTATAAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053917.6 |
||
| CDS-3UTR CCA 90 bp | CCACAAAGTCTGAGTGCGTTTTGTAATTACACCTTCATGTTAGCAGAAAAAGAGTCCGGAGCTTGGGGCTaGACGACACGCAGCACGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PQSLSAFCNYTFMLAEKESGAWG*TTRSTK Trigger: CTTCGTGCTGCGTGTCGTCCAGCCCCAAGCTCCGGA...CTCTTTTTCTGCTAACATGAAGGTGTAATTACAAAACGCACTCAGACTTTGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
||
| CDS-3UTR CCA 90 bp | GCATTGCTAACCCTGCAGCAGTGTACACACAAAGCAGCTTCTAATGACACACCACTGAACGCTTCCTCATaGGTTTCCTCAGGTCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ALLTLQQCTHKAASNDTPLNASS*VSSGPC Trigger: ACAAGGACCTGAGGAAACCCATGAGGAAGCGTTCAG...TGGTGTGTCATTAGAAGCTGCTTTGTGTGTACACTGCTGCAGGGTTAGCAATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053917.6 |
||
| CDS-3UTR CCA 90 bp | AGAGTCTGTTTCCTCCATGAAAGAAGTGCTTTTCATGATGGCCGGGAAGGCTTGCTGAACGCTTCCTCATaGGTTTCCTCAGGTCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RVCFLHERSAFHDGREGLLNASS*VSSGPC Trigger: ACAAGGACCTGAGGAAACCCATGAGGAAGCGTTCAG...CAAGCCTTCCCGGCCATCATGAAAAGCACTTCTTTCATGGAGGAAACAGACTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
||
| 3UTR CAA 72 bp | GGTCACCGCAACCTAAGATGGGCAGAAGCAAAGCACTaGTGTGTGACTCAGACTCTTAGACTTCATGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GHRNLRWAEAKH*CVTQTLRLHVR Trigger: TCTGACATGAAGTCTAAGAGTCTGAGTCACACACAAGTGCTTTGCTTCTGCCCATCTTAGGTTGCGGTGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053917.6 |
||
| CDS-3UTR TCA 90 bp | GCCATGGTGGTTACAAACTATACTCTCTGCTCTGAGGAATCAAAACCCAACCAGGGCCCGAGGATGGTCTaGAGGATTGAATTCCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: AMVVTNYTLCSEESKPNQGPRMV*RIEFHV Trigger: AACATGGAATTCAATCCTTCAGACCATCCTCGGGCC...CTGGTTGGGTTTTGATTCCTCAGAGCAGAGAGTATAGTTTGTAACCACCATGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234779.2 |
||
| CDS-3UTR GCA 90 bp | CATATTAATCTAGATAGAATGTTCTTGGAACTAGGCAGGAGAGGGATAGTTTTGGACTCCAGCCGCGAGTaGGCATTCCTCCGGAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HINLDRMFLELGRRGIVLDSSRE*AFLRSL Trigger: CAAGCTCCGGAGGAATGCGCACTCGCGGCTGGAGTC...CAAAACTATCCCTCTCCTGCCTAGTTCCAAGAACATTCTATCTAGATTAATATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
||
| CDS-3UTR CCA 90 bp | ACACCAAGTTTCCTGAATACTGATTTCACGTCCCTTAAAGCCGCTCTGCGTGCAGCGCTTCCAATTGGCTaGACAGATATCAATCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TPSFLNTDFTSLKAALRAALPIG*TDINLC Trigger: GCAGAGATTGATATCTGTCCAGCCAATTGGAAGCGC...TGCACGCAGAGCGGCTTTAAGGGACGTGAAATCAGTATTCAGGAAACTTGGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
||
| CDS-3UTR GCA 90 bp | ACTATACTCTCTGCTCTGAGGAATCAAAACCCAACCAGAATAAAAATGAACAAAGACTCCAGCCGCGAGTaGGCATTCCTCCGGAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TILSALRNQNPTRIKMNKDSSRE*AFLRSL Trigger: CAAGCTCCGGAGGAATGCGCACTCGCGGCTGGAGTC...TTTGTTCATTTTTATTCTGGTTGGGTTTTGATTCCTCAGAGCAGAGAGTATAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
||
| CDS-3UTR GCA 90 bp | CCAAGTTTCCTGAATACTGATTTCACGTCCCTTAAAGCCGCTCTGCGTGCACCCAGCAATTCAAGAAACTaGCTCTCCAGTTCATTCATG | + |
|
Preference number: 4 (lower is better) Translates to: PSFLNTDFTSLKAALRAPSNSRN*LSSSFM Trigger: CATGAATGAACTGGAGAGGCAGTTTCTTGAATTGCT...GGGTGCACGCAGAGCGGCTTTAAGGGACGTGAAATCAGTATTCAGGAAACTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
||
| CDS-3UTR GCA 90 bp | GGCTTTCTTCATCCTTCAACAATGACAACGAGCTCTTTACCAGAGGCTGCACTGAAAGCTCAGGTTGTTTaGTTCTGCCAGAGAACGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GFLHPSTMTTSSLPEAALKAQVV*FCQRTK Trigger: CTTCGTTCTCTGGCAGAAGCAAACAACCTGAGCTTT...CAGTGCAGCCTCTGGTAAAGAGCTCGTTGTCATTGTTGAAGGATGAAGAAAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053917.6 |
||
| CDS-3UTR CCA 90 bp | GACAAGGACCCAGAAACAGCAAAGCTACCAAGTAATCTATCCCTTAACACAACTGTGCTGGCCCGAGGATaGTCTGAAGGATTGAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: DKDPETAKLPSNLSLNTTVLARG*SEGLNS Trigger: GGAATTCAATCCTTCAGACCATCCTCGGGCCAGCAC...AGTTGTGTTAAGGGATAGATTACTTGGTAGCTTTGCTGTTTCTGGGTCCTTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053917.6 ENSMUST00000234779.2 ENSMUST00000234844.2 |
||
| CDS-3UTR CCA 90 bp | CAGACAAGGACCCAGAAACAGCAAAGCTACCAAGTAATCTATCCCTTAACACAAGTGCTGGCCCGAGGATaGTCTGAAGGATTGAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: QTRTQKQQSYQVIYPLTQVLARG*SEGLNS Trigger: GGAATTCAATCCTTCAGACCATCCTCGGGCCAGCAC...TTGTGTTAAGGGATAGATTACTTGGTAGCTTTGCTGTTTCTGGGTCCTTGTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053917.6 ENSMUST00000234779.2 ENSMUST00000234844.2 |
||
| CDS-3UTR CCA 90 bp | ATGCAGGAAGTCTTTCTTACAGAGCACACAGATTCCAAGGGCATAGCATGGCATGAGCATCCTTCCATCTaGGTCCCTGTTTTTGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: MQEVFLTEHTDSKGIAWHEHPSI*VPVFDV Trigger: CACATCAAAAACAGGGACCCAGATGGAAGGATGCTC...ATGCCATGCTATGCCCTTGGAATCTGTGTGCTCTGTAAGAAAGACTTCCTGCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
||
| CDS-3UTR CCA 90 bp | GCGTTTTGTAATTACACCTTCATGTTAGCAGAAAAAGAGAACCTGGGATGGAGAGGCTGGAGACCACCTTaGCAGAATCAGGTTGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AFCNYTFMLAEKENLGWRGWRPP*QNQVVS Trigger: GCTGACAACCTGATTCTGCCAAGGTGGTCTCCAGCC...TCTCCATCCCAGGTTCTCTTTTTCTGCTAACATGAAGGTGTAATTACAAAACGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
||
| CDS-3UTR CCA 90 bp | ATGCAGGAAGTCTTTCTTACAGAGCACACAGATTCCAAGGGCATAGCATGGCATTTAGGAGATGATGGCTaGAGACCACCTTGGCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: MQEVFLTEHTDSKGIAWHLGDDG*RPPWQN Trigger: ATTCTGCCAAGGTGGTCTCCAGCCATCATCTCCTAA...ATGCCATGCTATGCCCTTGGAATCTGTGTGCTCTGTAAGAAAGACTTCCTGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
||
| CDS-3UTR TCA 90 bp | CCACAAAGTCTGAGTGCGTTTTGTAATTACACCTTCATGTTAGCAGAAAAAGAGTGTTTTCCCGGTCGCTaGTGTGCTGCAGATTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PQSLSAFCNYTFMLAEKECFPGR*CAADCS Trigger: GCTGCAATCTGCAGCACATCAGCGACCGGGAAAACA...CTCTTTTTCTGCTAACATGAAGGTGTAATTACAAAACGCACTCAGACTTTGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
||
| CDS-3UTR GCA 90 bp | CATATTAATCTAGATAGAATGTTCTTGGAACTAGGCAGGAGAGGGATAGTTTTGCGGTCGCTGATGTGCTaGAGATTGCAGCCAGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HINLDRMFLELGRRGIVLRSLMC*RLQPVS Trigger: GGACACTGGCTGCAATCTGCAGCACATCAGCGACCG...CAAAACTATCCCTCTCCTGCCTAGTTCCAAGAACATTCTATCTAGATTAATATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
||
| CDS-3UTR CCA 90 bp | TTTTGTAATTACACCTTCATGTTAGCAGAAAAAGAGAACCTGGGATGGAGAGGACACAGAGACGAGAGATaGCCTCAAGCTTGTGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: FCNYTFMLAEKENLGWRGHRDER*PQACGH Trigger: GTGCCCACAAGCTTGAGGCCATCTCTCGTCTCTGTG...TCCTCTCCATCCCAGGTTCTCTTTTTCTGCTAACATGAAGGTGTAATTACAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
||
| 3UTR CAA 72 bp | CATGAAAGAAGTGCTTTTCATGATGGCCGGGAAGGCTaGACACCAAGTTTCCTGAATACTGATTTCACGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HERSAFHDGREG*TPSFLNTDFTS Trigger: GGACGTGAAATCAGTATTCAGGAAACTTGGTGTCAAGCCTTCCCGGCCATCATGAAAAGCACTTCTTTCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 ENSMUST00000234779.2 ENSMUST00000234844.2 |
||
| 3UTR CAA 72 bp | GAGATAGCATTCCCAAACAGCATCCAGCGTTACCTGTaGGACACCGAACTACTTTGCAAACAAGTTACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: EIAFPNSIQRYL*DTELLCKQVTV Trigger: GACTGTAACTTGTTTGCAAAGTAGTTCGGTGTCCAACAGGTAACGCTGGATGCTGTTTGGGAATGCTATCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053917.6 |
||
| 3UTR CAA 72 bp | AGCAGCACTGAAGAGTGTCCGAACGAACCGGTAAATTaGCTTCTGTTCTGGGTTGTGTTTGTCATAATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSTEECPNEPVN*LLFWVVFVIIR Trigger: CCTGATTATGACAAACACAACCCAGAACAGAAGCAAATTTACCGGTTCGTTCGGACACTCTTCAGTGCTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234779.2 ENSMUST00000234844.2 |
||
| 3UTR CAA 72 bp | CTCTGCTTAGGGGCTCCAGAGGAAAGCTCAGGTTGTTaGCTTCTGCCAGAGAACGAAGATCAAAATAATACT | + |
|
Preference number: 4 (lower is better) Translates to: LCLGAPEESSGC*LLPENEDQNNT Trigger: AGTATTATTTTGATCTTCGTTCTCTGGCAGAAGCAAACAACCTGAGCTTTCCTCTGGAGCCCCTAAGCAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000234779.2 ENSMUST00000234844.2 |
||
| CDS-3UTR GCA 90 bp | ACTATACTCTCTGCTCTGAGGAATCAAAACCCAACCAGAATAAAAATGAACAAACGGTCGCTGATGTGCTaGAGATTGCAGCCAGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TILSALRNQNPTRIKMNKRSLMC*RLQPVS Trigger: GGACACTGGCTGCAATCTGCAGCACATCAGCGACCG...TTTGTTCATTTTTATTCTGGTTGGGTTTTGATTCCTCAGAGCAGAGAGTATAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
||
| CDS-3UTR GCA 90 bp | GCCATGGTGGTTACAAACTATACTCTCTGCTCTGAGGAATCAAAACCCAACCAGCAGGTTGTTTGCTTCTaGCAGAGAACGAAGATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: AMVVTNYTLCSEESKPNQQVVCF*QRTKIK Trigger: TTTGATCTTCGTTCTCTGGCAGAAGCAAACAACCTG...CTGGTTGGGTTTTGATTCCTCAGAGCAGAGAGTATAGTTTGTAACCACCATGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
||
| CDS-3UTR CCA 90 bp | GACAAGGACCCAGAAACAGCAAAGCTACCAAGTAATCTATCCCTTAACACAACTGAGCATCCTTCCATCTaGGTCCCTGTTTTTGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: DKDPETAKLPSNLSLNTTEHPSI*VPVFDV Trigger: CACATCAAAAACAGGGACCCAGATGGAAGGATGCTC...AGTTGTGTTAAGGGATAGATTACTTGGTAGCTTTGCTGTTTCTGGGTCCTTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
||
| CDS-3UTR CCA 90 bp | ATGTTCTTGGAACTAGGCAGGAGAGGGATAGTTTTGGTTCAGTACTACAGTCAAACATTCCACACAGCTTaGTCATCCCACACCTTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: MFLELGRRGIVLVQYYSQTFHTA*SSHTLE Trigger: CTCTAAGGTGTGGGATGACCAAGCTGTGTGGAATGT...TTGACTGTAGTACTGAACCAAAACTATCCCTCTCCTGCCTAGTTCCAAGAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
||
| CDS-3UTR CCA 90 bp | GACAAGGACCCAGAAACAGCAAAGCTACCAAGTAATCTATCCCTTAACACAACTACATTCCACACAGCTTaGTCATCCCACACCTTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: DKDPETAKLPSNLSLNTTTFHTA*SSHTLE Trigger: CTCTAAGGTGTGGGATGACCAAGCTGTGTGGAATGT...AGTTGTGTTAAGGGATAGATTACTTGGTAGCTTTGCTGTTTCTGGGTCCTTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
||
| CDS-3UTR CCA 90 bp | AGGACCCAGAAACAGCAAAGCTACCAAGTAATCTATCCCTTAACACAACTTCCTTTAGGAGATGATGGCTaGAGACCACCTTGGCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: RTQKQQSYQVIYPLTQLPLGDDG*RPPWQN Trigger: ATTCTGCCAAGGTGGTCTCCAGCCATCATCTCCTAA...AGGAAGTTGTGTTAAGGGATAGATTACTTGGTAGCTTTGCTGTTTCTGGGTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
||
| CDS-3UTR TCA 90 bp | CCACAAAGTCTGAGTGCGTTTTGTAATTACACCTTCATGTTAGCAGAAAAAGAGGGCCCGAGGATGGTCTaGAGGATTGAATTCCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: PQSLSAFCNYTFMLAEKEGPRMV*RIEFHV Trigger: AACATGGAATTCAATCCTTCAGACCATCCTCGGGCC...CTCTTTTTCTGCTAACATGAAGGTGTAATTACAAAACGCACTCAGACTTTGTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053917.6 |
||
| CDS-3UTR CCA 90 bp | AAGGAAAACCTCACAAACCTCGGTCACCGCAACCTAAGATGGGCAGAAGCAAAGAATTTGCTTCTGTTCTaGGTTGTGTTTGTCATAATC | + |
|
Preference number: 4 (lower is better) Translates to: KENLTNLGHRNLRWAEAKNLLLF*VVFVII Trigger: GATTATGACAAACACAACCCAGAACAGAAGCAAATT...CTTTGCTTCTGCCCATCTTAGGTTGCGGTGACCGAGGTTTGTGAGGTTTTCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053917.6 |
||
| 3UTR CAA 72 bp | GGCACAAGCACCCATATTAATCTAGATAGAATGTTCTaGGAACTAGGCAGGAGAGGGATAGTTTTGGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GTSTHINLDRMF*ELGRRGIVLVQ Trigger: CTGAACCAAAACTATCCCTCTCCTGCCTAGTTCCAAGAACATTCTATCTAGATTAATATGGGTGCTTGTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
||
| CDS-3UTR TCA 90 bp | AACGAACCGGTAAATTTGCTTCTGTTCTGGGTTGTGTTTGTCATAATCAGGTGGTCTCTCACGTCTGTCTaGGATTTGCTGAGGAATATT | + |
|
Preference number: 4 (lower is better) Translates to: NEPVNLLLFWVVFVIIRWSLTSV*DLLRNI Trigger: AATATTCCTCAGCAAATCTCAGACAGACGTGAGAGA...CCACCTGATTATGACAAACACAACCCAGAACAGAAGCAAATTTACCGGTTCGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234844.2 |
||
| CDS-3UTR GCA 90 bp | TGGTGGTTACAAACTATACTCTCTGCTCTGAGGAATCAAAACCCAACCAGAATAAAAGCTCAGGTTGTTTaGTTCTGCCAGAGAACGAAG | + |
|
Preference number: 4 (lower is better) Translates to: WWLQTILSALRNQNPTRIKAQVV*FCQRTK Trigger: CTTCGTTCTCTGGCAGAAGCAAACAACCTGAGCTTT...TATTCTGGTTGGGTTTTGATTCCTCAGAGCAGAGAGTATAGTTTGTAACCACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
||
| CDS-3UTR CCA 90 bp | ACTATACTCTCTGCTCTGAGGAATCAAAACCCAACCAGAATAAAAATGAACAAAGGTGTACTTGAGGTTTaGCTGGCTGACTGTGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: TILSALRNQNPTRIKMNKGVLEV*LADCAV Trigger: GACAGCACAGTCAGCCAGCCAAACCTCAAGTACACC...TTTGTTCATTTTTATTCTGGTTGGGTTTTGATTCCTCAGAGCAGAGAGTATAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
||
| CDS-3UTR CCA 90 bp | GTTTTGGTTCAGTACTACAGTCAAGTTAATCCTGCTATTGTTGAAAGAGAATCAGGTGTACTTGAGGTTTaGCTGGCTGACTGTGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VLVQYYSQVNPAIVERESGVLEV*LADCAV Trigger: GACAGCACAGTCAGCCAGCCAAACCTCAAGTACACC...TGATTCTCTTTCAACAATAGCAGGATTAACTTGACTGTAGTACTGAACCAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
||
| CDS-3UTR CCA 90 bp | ACACCAAGTTTCCTGAATACTGATTTCACGTCCCTTAAAGCCGCTCTGCGTGCAAATTTGCTTCTGTTCTaGGTTGTGTTTGTCATAATC | + |
|
Preference number: 4 (lower is better) Translates to: TPSFLNTDFTSLKAALRANLLLF*VVFVII Trigger: GATTATGACAAACACAACCCAGAACAGAAGCAAATT...TGCACGCAGAGCGGCTTTAAGGGACGTGAAATCAGTATTCAGGAAACTTGGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
||
| CDS-3UTR CCA 90 bp | CAGACAAGGACCCAGAAACAGCAAAGCTACCAAGTAATCTATCCCTTAACACAACAATGCGCTTCCAATTaGCTGGACAGATATCAATCT | + |
|
Preference number: 4 (lower is better) Translates to: QTRTQKQQSYQVIYPLTQQCASN*LDRYQS Trigger: AGATTGATATCTGTCCAGCCAATTGGAAGCGCATTG...TTGTGTTAAGGGATAGATTACTTGGTAGCTTTGCTGTTTCTGGGTCCTTGTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
||
| CDS-3UTR CCA 90 bp | TGTCCGAACGAACCGGTAAATTTGCTTCTGTTCTGGGTTGTGTTTGTCATAATCTTCCATCTGGGTCCATaGTTAATGAAGAGACTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CPNEPVNLLLFWVVFVIIFHLGP*LMKRLL Trigger: CAAGAGTCTCTTCATTAACCATGGACCCAGATGGAA...GATTATGACAAACACAACCCAGAACAGAAGCAAATTTACCGGTTCGTTCGGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234844.2 |
||
| 3UTR CAA 72 bp | CTGAATAAAACCAAGCCAGGCTATAAAGAGTCACTGTaGAATGTCAGGTACCAGACTGTGTGTACACACATA | + |
|
Preference number: 4 (lower is better) Translates to: LNKTKPGYKESL*NVRYQTVCTHI Trigger: TATGTGTGTACACACAGTCTGGTACCTGACATTCAACAGTGACTCTTTATAGCCTGGCTTGGTTTTATTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053917.6 |
||
| CDS-3UTR CCA 90 bp | AGGACCCAGAAACAGCAAAGCTACCAAGTAATCTATCCCTTAACACAACTTCCTTTTGTCATAATCAGGTaGCACTTCGGATTTCGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RTQKQQSYQVIYPLTQLPFVIIR*HFGFRK Trigger: CTTTCGAAATCCGAAGTGCCACCTGATTATGACAAA...AGGAAGTTGTGTTAAGGGATAGATTACTTGGTAGCTTTGCTGTTTCTGGGTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
||
| CDS-3UTR CCA 90 bp | CTCAAAAGGAATAAAGTTCCCTGCCCACAAACAAATCACAAAAGGATACAAGATGCGCTTCCAATTGGCTaGACAGATATCAATCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LKRNKVPCPQTNHKRIQDALPIG*TDINLC Trigger: GCAGAGATTGATATCTGTCCAGCCAATTGGAAGCGC...ATCTTGTATCCTTTTGTGATTTGTTTGTGGGCAGGGAACTTTATTCCTTTTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053917.6 |
||
| CDS-3UTR CCA 90 bp | TGGTGGTTACAAACTATACTCTCTGCTCTGAGGAATCAAAACCCAACCAGAATACAATGCGCTTCCAATTaGCTGGACAGATATCAATCT | + |
|
Preference number: 4 (lower is better) Translates to: WWLQTILSALRNQNPTRIQCASN*LDRYQS Trigger: AGATTGATATCTGTCCAGCCAATTGGAAGCGCATTG...TATTCTGGTTGGGTTTTGATTCCTCAGAGCAGAGAGTATAGTTTGTAACCACCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
||
| CDS-3UTR CCA 90 bp | ATGCAGGAAGTCTTTCTTACAGAGCACACAGATTCCAAGGGCATAGCATGGCATGATCAAAATAATACTTaGCATACACACTGGAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: MQEVFLTEHTDSKGIAWHDQNNT*HTHWKE Trigger: TTCCTTCCAGTGTGTATGCCAAGTATTATTTTGATC...ATGCCATGCTATGCCCTTGGAATCTGTGTGCTCTGTAAGAAAGACTTCCTGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
||
| CDS-3UTR TCA 90 bp | CCACAAAGTCTGAGTGCGTTTTGTAATTACACCTTCATGTTAGCAGAAAAAGAGTCTCTCACGTCTGTCTaGGATTTGCTGAGGAATATT | + |
|
Preference number: 4 (lower is better) Translates to: PQSLSAFCNYTFMLAEKESLTSV*DLLRNI Trigger: AATATTCCTCAGCAAATCTCAGACAGACGTGAGAGA...CTCTTTTTCTGCTAACATGAAGGTGTAATTACAAAACGCACTCAGACTTTGTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053917.6 |
||
| CDS-3UTR GCA 90 bp | CCACAAAGTCTGAGTGCGTTTTGTAATTACACCTTCATGTTAGCAGAAAAAGAGCAGGTTGTTTGCTTCTaGCAGAGAACGAAGATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PQSLSAFCNYTFMLAEKEQVVCF*QRTKIK Trigger: TTTGATCTTCGTTCTCTGGCAGAAGCAAACAACCTG...CTCTTTTTCTGCTAACATGAAGGTGTAATTACAAAACGCACTCAGACTTTGTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
||
| 3UTR CAA 72 bp | AGAATGTTCTTGGAACTAGGCAGGAGAGGGATAGTTTaGGTTCAGTACTACAGTCAAGTTAATCCTGCTATT | + |
|
Preference number: 4 (lower is better) Translates to: RMFLELGRRGIV*VQYYSQVNPAI Trigger: AATAGCAGGATTAACTTGACTGTAGTACTGAACCAAAACTATCCCTCTCCTGCCTAGTTCCAAGAACATTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
||
| 3UTR CAA 72 bp | CCTTCCTATTCAGAGGTAGAGTCCAGTGTACAAGGCTaGAAAACAATAGTCAACAGTCTGAATAAAACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PSYSEVESSVQG*KTIVNSLNKTK Trigger: CTTGGTTTTATTCAGACTGTTGACTATTGTTTTCAAGCCTTGTACACTGGACTCTACCTCTGAATAGGAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053917.6 |
||
| CDS-3UTR GCA 90 bp | TATACTCTCTGCTCTGAGGAATCAAAACCCAACCAGAATAAAAATGAACAAACAAGCAATTCAAGAAACTaGCTCTCCAGTTCATTCATG | + |
|
Preference number: 4 (lower is better) Translates to: YTLCSEESKPNQNKNEQTSNSRN*LSSSFM Trigger: CATGAATGAACTGGAGAGGCAGTTTCTTGAATTGCT...TGTTTGTTCATTTTTATTCTGGTTGGGTTTTGATTCCTCAGAGCAGAGAGTATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
||
| CDS-3UTR CCA 90 bp | CAGAAACAGCAAAGCTACCAAGTAATCTATCCCTTAACACAACTTCCTTTTCCTGATTTCGAAAGAGGGTaGAGGTTTTCATCAAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: QKQQSYQVIYPLTQLPFPDFERG*RFSSKI Trigger: TATTTTTGATGAAAACCTCCACCCTCTTTCGAAATC...AGGAAAAGGAAGTTGTGTTAAGGGATAGATTACTTGGTAGCTTTGCTGTTTCTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
||
| CDS-3UTR CCA 90 bp | TATACTCTCTGCTCTGAGGAATCAAAACCCAACCAGAATAAAAATGAACAAACATTTGTCATAATCAGGTaGCACTTCGGATTTCGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: YTLCSEESKPNQNKNEQTFVIIR*HFGFRK Trigger: CTTTCGAAATCCGAAGTGCCACCTGATTATGACAAA...TGTTTGTTCATTTTTATTCTGGTTGGGTTTTGATTCCTCAGAGCAGAGAGTATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
||
| CDS-3UTR CCA 90 bp | CCACAAAGTCTGAGTGCGTTTTGTAATTACACCTTCATGTTAGCAGAAAAAGAGGATCAAAATAATACTTaGCATACACACTGGAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PQSLSAFCNYTFMLAEKEDQNNT*HTHWKE Trigger: TTCCTTCCAGTGTGTATGCCAAGTATTATTTTGATC...CTCTTTTTCTGCTAACATGAAGGTGTAATTACAAAACGCACTCAGACTTTGTGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
||
| CDS-3UTR TCA 90 bp | ACTATACTCTCTGCTCTGAGGAATCAAAACCCAACCAGAATAAAAATGAACAAAGATGGTCTGAAGGATTaGATTCCATGTTTAAATCGT | + |
|
Preference number: 4 (lower is better) Translates to: TILSALRNQNPTRIKMNKDGLKD*IPCLNR Trigger: ACGATTTAAACATGGAATTCAATCCTTCAGACCATC...TTTGTTCATTTTTATTCTGGTTGGGTTTTGATTCCTCAGAGCAGAGAGTATAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053917.6 |
||
| CDS-3UTR CCA 90 bp | ACTATACTCTCTGCTCTGAGGAATCAAAACCCAACCAGAATAAAAATGAACAAAGATTTCGAAAGAGGGTaGAGGTTTTCATCAAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: TILSALRNQNPTRIKMNKDFERG*RFSSKI Trigger: TATTTTTGATGAAAACCTCCACCCTCTTTCGAAATC...TTTGTTCATTTTTATTCTGGTTGGGTTTTGATTCCTCAGAGCAGAGAGTATAGT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
||
| CDS GCA 90 bp | CTCTTGCGTTTTTCTCTCACGTCGATGTTTTCCCGGTCGCTGATGTaGTGCAGATTGCAGCCAGTGTCCTCACGGCTGAGGTCCGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LLRFSLTSMFSRSLM*CRLQPVSSRLRSVS Trigger: GGACACGGACCTCAGCCGTGAGGACACTGGCTGCAATCTGCAGCACATCAGCGACCGGGAAAACATCGACGTGAGAGAAAAACGCAAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234102.2 |
||
| CDS-3UTR CAA 90 bp | TCAGCACTTGCTGAACGCTTCCTCATGGGTTTCCTCAGGTCCTTGTACTTGTCCCTGATGTGCTGCAGATaGCAGCCAGTGTCCTCACGG | + |
|
Preference number: 5 (lower is better) Translates to: SALAERFLMGFLRSLYLSLMCCR*QPVSSR Trigger: CCGTGAGGACACTGGCTGCAATCTGCAGCACATCAG...GGACAAGTACAAGGACCTGAGGAAACCCATGAGGAAGCGTTCAGCAAGTGCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234844.2 |
||
| CDS GCA 90 bp | TTGAATTCCATGTTTAAATCGTCGATGTTTTCCCGGTCGCTGATGTaGTGCAGATTGCAGCCAGTGTCCTCACGGCTGAGGTCCGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LNSMFKSSMFSRSLM*CRLQPVSSRLRSVS Trigger: GGACACGGACCTCAGCCGTGAGGACACTGGCTGCAATCTGCAGCACATCAGCGACCGGGAAAACATCGACGATTTAAACATGGAATTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234844.2 |
||
| CDS-3UTR CAA 90 bp | AGAGTCTGTTTCCTCCATGAAAGAAGTGCTTTTCATGATGGCCGGGAAGGCTTGCTCAGGTCCTTGTACTaGTCCTCACAGAGACGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: RVCFLHERSAFHDGREGLLRSLY*SSQRRE Trigger: CTCTCGTCTCTGTGAGGACAAGTACAAGGACCTGAG...CAAGCCTTCCCGGCCATCATGAAAAGCACTTCTTTCATGGAGGAAACAGACTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
||
| CDS-3UTR CAA 90 bp | AGGACCCAGAAACAGCAAAGCTACCAAGTAATCTATCCCTTAACACAACTTCCTCTGATGTGCTGCAGATaGCAGCCAGTGTCCTCACGG | + |
|
Preference number: 5 (lower is better) Translates to: RTQKQQSYQVIYPLTQLPLMCCR*QPVSSR Trigger: CCGTGAGGACACTGGCTGCAATCTGCAGCACATCAG...AGGAAGTTGTGTTAAGGGATAGATTACTTGGTAGCTTTGCTGTTTCTGGGTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 ENSMUST00000234844.2 |
||
| CDS-3UTR CAA 90 bp | ATGCAGGAAGTCTTTCTTACAGAGCACACAGATTCCAAGGGCATAGCATGGCATCTCAGGTCCTTGTACTaGTCCTCACAGAGACGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: MQEVFLTEHTDSKGIAWHLRSLY*SSQRRE Trigger: CTCTCGTCTCTGTGAGGACAAGTACAAGGACCTGAG...ATGCCATGCTATGCCCTTGGAATCTGTGTGCTCTGTAAGAAAGACTTCCTGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
||
| CDS-3UTR CAA 90 bp | CACACCTTAGAGGCCAGCAGGATTGCCCCTAGAACAATGCGCTTCCAATTGGCTTTAATGAAGAGACTCTaGCGTTTTTCTCTCACGTCT | + |
|
Preference number: 5 (lower is better) Translates to: HTLEASRIAPRTMRFQLALMKRL*RFSLTS Trigger: AGACGTGAGAGAAAAACGCAAGAGTCTCTTCATTAA...AGCCAATTGGAAGCGCATTGTTCTAGGGGCAATCCTGCTGGCCTCTAAGGTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234844.2 |
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| CDS-3UTR CAA 90 bp | ACACCAAGTTTCCTGAATACTGATTTCACGTCCCTTAAAGCCGCTCTGCGTGCAGAAAGCTCAGGTTGTTaGCTTCTGCCAGAGAACGAA | + |
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Preference number: 5 (lower is better) Translates to: TPSFLNTDFTSLKAALRAESSGC*LLPENE Trigger: TTCGTTCTCTGGCAGAAGCAAACAACCTGAGCTTTC...TGCACGCAGAGCGGCTTTAAGGGACGTGAAATCAGTATTCAGGAAACTTGGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
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| CDS-3UTR CAA 90 bp | GCATTGCTAACCCTGCAGCAGTGTACACACAAAGCAGCTTCTAATGACACACCAAGAGGAAAGCTCAGGTaGTTTGCTTCTGCCAGAGAA | + |
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Preference number: 5 (lower is better) Translates to: ALLTLQQCTHKAASNDTPRGKLR*FASARE Trigger: TTCTCTGGCAGAAGCAAACAACCTGAGCTTTCCTCT...TGGTGTGTCATTAGAAGCTGCTTTGTGTGTACACTGCTGCAGGGTTAGCAATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053917.6 |
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| CDS-3UTR CAA 90 bp | GCATTGCTAACCCTGCAGCAGTGTACACACAAAGCAGCTTCTAATGACACACCAAACGAACCGGTAAATTaGCTTCTGTTCTGGGTTGTG | + |
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Preference number: 5 (lower is better) Translates to: ALLTLQQCTHKAASNDTPNEPVN*LLFWVV Trigger: CACAACCCAGAACAGAAGCAAATTTACCGGTTCGTT...TGGTGTGTCATTAGAAGCTGCTTTGTGTGTACACTGCTGCAGGGTTAGCAATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053917.6 |
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| CDS-3UTR CAA 90 bp | CCACAAAGTCTGAGTGCGTTTTGTAATTACACCTTCATGTTAGCAGAAAAAGAGTGGCTGGAGACCACCTaGGCAGAATCAGGTTGTCAG | + |
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Preference number: 5 (lower is better) Translates to: PQSLSAFCNYTFMLAEKEWLETT*AESGCQ Trigger: CTGACAACCTGATTCTGCCAAGGTGGTCTCCAGCCA...CTCTTTTTCTGCTAACATGAAGGTGTAATTACAAAACGCACTCAGACTTTGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
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| CDS-3UTR CAA 90 bp | GTTTTGGTTCAGTACTACAGTCAAGTTAATCCTGCTATTGTTGAAAGAGAATCACTGATGTGCTGCAGATaGCAGCCAGTGTCCTCACGG | + |
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Preference number: 5 (lower is better) Translates to: VLVQYYSQVNPAIVERESLMCCR*QPVSSR Trigger: CCGTGAGGACACTGGCTGCAATCTGCAGCACATCAG...TGATTCTCTTTCAACAATAGCAGGATTAACTTGACTGTAGTACTGAACCAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
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| CDS-3UTR CAA 90 bp | CTCTCTGCTCTGAGGAATCAAAACCCAACCAGAATAAAAATGAACAAACATCCCGGTTTCCTCAGGTCCTaGTACTTGTCCTCACAGAGA | + |
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Preference number: 5 (lower is better) Translates to: LSALRNQNPTRIKMNKHPGFLRS*YLSSQR Trigger: TCTCTGTGAGGACAAGTACAAGGACCTGAGGAAACC...GGGATGTTTGTTCATTTTTATTCTGGTTGGGTTTTGATTCCTCAGAGCAGAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
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| CDS-3UTR CAA 90 bp | CATATTAATCTAGATAGAATGTTCTTGGAACTAGGCAGGAGAGGGATAGTTTTGTGGCTGGAGACCACCTaGGCAGAATCAGGTTGTCAG | + |
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Preference number: 5 (lower is better) Translates to: HINLDRMFLELGRRGIVLWLETT*AESGCQ Trigger: CTGACAACCTGATTCTGCCAAGGTGGTCTCCAGCCA...CAAAACTATCCCTCTCCTGCCTAGTTCCAAGAACATTCTATCTAGATTAATATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
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| CDS-3UTR CAA 90 bp | GCGTTTTGTAATTACACCTTCATGTTAGCAGAAAAAGAGAACCTGGGATGGAGAAGAGGAAAGCTCAGGTaGTTTGCTTCTGCCAGAGAA | + |
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Preference number: 5 (lower is better) Translates to: AFCNYTFMLAEKENLGWRRGKLR*FASARE Trigger: TTCTCTGGCAGAAGCAAACAACCTGAGCTTTCCTCT...TCTCCATCCCAGGTTCTCTTTTTCTGCTAACATGAAGGTGTAATTACAAAACGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
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| CDS-3UTR CAA 90 bp | CCACAAAGTCTGAGTGCGTTTTGTAATTACACCTTCATGTTAGCAGAAAAAGAGGGTTTCCTCAGGTCCTaGTACTTGTCCTCACAGAGA | + |
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Preference number: 5 (lower is better) Translates to: PQSLSAFCNYTFMLAEKEGFLRS*YLSSQR Trigger: TCTCTGTGAGGACAAGTACAAGGACCTGAGGAAACC...CTCTTTTTCTGCTAACATGAAGGTGTAATTACAAAACGCACTCAGACTTTGTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
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| CDS-3UTR CAA 90 bp | ATGTTCTTGGAACTAGGCAGGAGAGGGATAGTTTTGGTTCAGTACTACAGTCAAGCAAGAGCTACACATTaGATGGTGTACTTGAGGTTT | + |
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Preference number: 5 (lower is better) Translates to: MFLELGRRGIVLVQYYSQARATH*MVYLRF Trigger: AAACCTCAAGTACACCATCAAATGTGTAGCTCTTGC...TTGACTGTAGTACTGAACCAAAACTATCCCTCTCCTGCCTAGTTCCAAGAACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
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| CDS-3UTR CAA 90 bp | CCACAAAGTCTGAGTGCGTTTTGTAATTACACCTTCATGTTAGCAGAAAAAGAGGAAAGCTCAGGTTGTTaGCTTCTGCCAGAGAACGAA | + |
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Preference number: 5 (lower is better) Translates to: PQSLSAFCNYTFMLAEKEESSGC*LLPENE Trigger: TTCGTTCTCTGGCAGAAGCAAACAACCTGAGCTTTC...CTCTTTTTCTGCTAACATGAAGGTGTAATTACAAAACGCACTCAGACTTTGTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
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| CDS-3UTR CAA 90 bp | TGGTGGTTACAAACTATACTCTCTGCTCTGAGGAATCAAAACCCAACCAGAATAGCAAGAGCTACACATTaGATGGTGTACTTGAGGTTT | + |
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Preference number: 5 (lower is better) Translates to: WWLQTILSALRNQNPTRIARATH*MVYLRF Trigger: AAACCTCAAGTACACCATCAAATGTGTAGCTCTTGC...TATTCTGGTTGGGTTTTGATTCCTCAGAGCAGAGAGTATAGTTTGTAACCACCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
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| CDS-3UTR CAA 90 bp | TTTTGTAATTACACCTTCATGTTAGCAGAAAAAGAGAACCTGGGATGGAGAGGAACAATGCGCTTCCAATaGGCTGGACAGATATCAATC | + |
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Preference number: 5 (lower is better) Translates to: FCNYTFMLAEKENLGWRGTMRFQ*AGQISI Trigger: GATTGATATCTGTCCAGCCAATTGGAAGCGCATTGT...TCCTCTCCATCCCAGGTTCTCTTTTTCTGCTAACATGAAGGTGTAATTACAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
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| CDS-3UTR CAA 90 bp | CTCTCTGCTCTGAGGAATCAAAACCCAACCAGAATAAAAATGAACAAACATCCCTTAATGAAGAGACTCTaGCGTTTTTCTCTCACGTCT | + |
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Preference number: 5 (lower is better) Translates to: LSALRNQNPTRIKMNKHPLMKRL*RFSLTS Trigger: AGACGTGAGAGAAAAACGCAAGAGTCTCTTCATTAA...GGGATGTTTGTTCATTTTTATTCTGGTTGGGTTTTGATTCCTCAGAGCAGAGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000053917.6 |
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| CDS-3UTR CAA 90 bp | CTCAAAAGGAATAAAGTTCCCTGCCCACAAACAAATCACAAAAGGATACAAGATACAATGCGCTTCCAATaGGCTGGACAGATATCAATC | + |
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Preference number: 5 (lower is better) Translates to: LKRNKVPCPQTNHKRIQDTMRFQ*AGQISI Trigger: GATTGATATCTGTCCAGCCAATTGGAAGCGCATTGT...ATCTTGTATCCTTTTGTGATTTGTTTGTGGGCAGGGAACTTTATTCCTTTTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053917.6 |
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| CDS-3UTR CAA 90 bp | TTTTGTAATTACACCTTCATGTTAGCAGAAAAAGAGAACCTGGGATGGAGAGGATTAATGAAGAGACTCTaGCGTTTTTCTCTCACGTCG | + |
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Preference number: 5 (lower is better) Translates to: FCNYTFMLAEKENLGWRGLMKRL*RFSLTS Trigger: CGACGTGAGAGAAAAACGCAAGAGTCTCTTCATTAA...TCCTCTCCATCCCAGGTTCTCTTTTTCTGCTAACATGAAGGTGTAATTACAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000234102.2 |
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| CDS-3UTR CAA 90 bp | ACTATACTCTCTGCTCTGAGGAATCAAAACCCAACCAGAATAAAAATGAACAAAAACGAACCGGTAAATTaGCTTCTGTTCTGGGTTGTG | + |
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Preference number: 5 (lower is better) Translates to: TILSALRNQNPTRIKMNKNEPVN*LLFWVV Trigger: CACAACCCAGAACAGAAGCAAATTTACCGGTTCGTT...TTTGTTCATTTTTATTCTGGTTGGGTTTTGATTCCTCAGAGCAGAGAGTATAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234102.2 |
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| CDS TCA 72 bp | TGCGTTTTTCTCTCACGTCGATGTTTTCCCGGTCGCTaGTGTGCTGCAGATTGCAGCCAGTGTCCTCACGGC | + |
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Preference number: 6 (lower is better) Translates to: CVFLSRRCFPGR*CAADCSQCPHG Trigger: GCCGTGAGGACACTGGCTGCAATCTGCAGCACATCAGCGACCGGGAAAACATCGACGTGAGAGAAAAACGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234102.2 |
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| CDS GCA 72 bp | TTTTCTCTCACGTCGATGTTTTCCCGGTCGCTGATGTaGTGCAGATTGCAGCCAGTGTCCTCACGGCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: FSLTSMFSRSLM*CRLQPVSSRLR Trigger: CCTCAGCCGTGAGGACACTGGCTGCAATCTGCAGCACATCAGCGACCGGGAAAACATCGACGTGAGAGAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234102.2 |
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| CDS GCA 72 bp | ATGTTTAAATCGTCGATGTTTTCCCGGTCGCTGATGTaGTGCAGATTGCAGCCAGTGTCCTCACGGCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: MFKSSMFSRSLM*CRLQPVSSRLR Trigger: CCTCAGCCGTGAGGACACTGGCTGCAATCTGCAGCACATCAGCGACCGGGAAAACATCGACGATTTAAACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234844.2 |
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| CDS TCA 72 bp | ATTCCATGTTTAAATCGTCGATGTTTTCCCGGTCGCTaGTGTGCTGCAGATTGCAGCCAGTGTCCTCACGGC | + |
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Preference number: 6 (lower is better) Translates to: IPCLNRRCFPGR*CAADCSQCPHG Trigger: GCCGTGAGGACACTGGCTGCAATCTGCAGCACATCAGCGACCGGGAAAACATCGACGATTTAAACATGGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053917.6 ENSMUST00000234844.2 |
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