Pregenerated sensors for CCNT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000011960Ensembl transcript IDs: ENSMUST00000012104.7, ENSMUST00000168928.8, ENSMUST00000169707.8
Found 213 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTAAGGTGCTTGTCTGGCTGCTGTGTTTTGGATCACTTGGGCGTTTaGTCACGGGGCCGGCTGGCAGCTGTAAGTGAGAGTGCCTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: LRCLSGCCVLDHLGV*SRGRLAAVSESACV Trigger: CACACAGGCACTCTCACTTACAGCTGCCAGCCGGCCCCGTGAGCAAACGCCCAAGTGATCCAAAACACAGCAGCCAGACAAGCACCTTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
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| 3UTR TCA 90 bp | ATGGCTGTCGTGAGACAGGAGATTCTGGGCAGCATACGCATACTGTaGCTTCACATTGGCCTCCATGTTCTCCAGCTGCCTCTTCTGAGC | + |
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Preference number: 1 (lower is better) Translates to: MAVVRQEILGSIRIL*LHIGLHVLQLPLLS Trigger: GCTCAGAAGAGGCAGCTGGAGAACATGGAGGCCAATGTGAAGTCACAGTATGCGTATGCTGCCCAGAATCTCCTGTCTCACGACAGCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
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| 3UTR TCA 90 bp | ACAGATCAGTTTCCAGTTCAGAACCCTAAATCACACCTACGTGAGTaGGGCTGCTGCACTGCTTTCCTTGGGTTCTTCGGCCGGCCAGAC | + |
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Preference number: 1 (lower is better) Translates to: TDQFPVQNPKSHLRE*GCCTAFLGFFGRPD Trigger: GTCTGGCCGGCCGAAGAACCCAAGGAAAGCAGTGCAGCAGCCTCACTCACGTAGGTGTGATTTAGGGTTCTGAACTGGAAACTGATCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
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| 3UTR GCA 90 bp | AGTCAGGTCAGAACTAGAAGCGAGAGGGCTGCTACCACGCAAGCCTaGGGTGAAGGGAAGAGAGGACTCACACTGTCAATACATGTCTCT | + |
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Preference number: 1 (lower is better) Translates to: SQVRTRSERAATTQA*GEGKRGLTLSIHVS Trigger: AGAGACATGTATTGACAGTGTGAGTCCTCTCTTCCCTTCACCGCAGGCTTGCGTGGTAGCAGCCCTCTCGCTTCTAGTTCTGACCTGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
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| 3UTR CCA 90 bp | GAGGATTGTCTGCTCCGACGTGTTTTCATCTGCTCCTCGGTCATCTaGCTTGGTTTTCATGGCAGCCTGGTACGCCCTCCAATTCCGAAT | + |
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Preference number: 1 (lower is better) Translates to: EDCLLRRVFICSSVI*LGFHGSLVRPPIPN Trigger: ATTCGGAATTGGAGGGCGTACCAGGCTGCCATGAAAACCAAGCCAGATGACCGAGGAGCAGATGAAAACACGTCGGAGCAGACAATCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
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| 3UTR CCA 90 bp | TTGTCTGCTCCGACGTGTTTTCATCTGCTCCTCGGTCATCTGGCTTaGTTTTCATGGCAGCCTGGTACGCCCTCCAATTCCGAATACGTT | + |
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Preference number: 1 (lower is better) Translates to: LSAPTCFHLLLGHLA*FSWQPGTPSNSEYV Trigger: AACGTATTCGGAATTGGAGGGCGTACCAGGCTGCCATGAAAACCAAGCCAGATGACCGAGGAGCAGATGAAAACACGTCGGAGCAGACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
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| 3UTR GCA 90 bp | TGCATGCTAGCTGGCAGGTATATCTGCTACGCCAAAATAATGCAATaGAGAAGTTCATGCAGAGCCCACGAGGGAGTTCAGGACCTACGC | + |
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Preference number: 1 (lower is better) Translates to: CMLAGRYICYAKIMQ*RSSCRAHEGVQDLR Trigger: GCGTAGGTCCTGAACTCCCTCGTGGGCTCTGCATGAACTTCTGCATTGCATTATTTTGGCGTAGCAGATATACCTGCCAGCTAGCATGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
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| 3UTR GCA 90 bp | CTGAGAAATCATATTGAGGATTGTCTGCTCCGACGTGTTTTCATCTaGTCCTCGGTCATCTGGCTTGGTTTTCATGGCAGCCTGGTACGC | + |
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Preference number: 1 (lower is better) Translates to: LRNHIEDCLLRRVFI*SSVIWLGFHGSLVR Trigger: GCGTACCAGGCTGCCATGAAAACCAAGCCAGATGACCGAGGAGCAGATGAAAACACGTCGGAGCAGACAATCCTCAATATGATTTCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
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| 3UTR TCA 90 bp | ACAGTGTCTGTTGGCTGGGCTTGCTCATGCATTATACCAATGCTGTaGAATTCAAGCTCTGACGCCAAACAGGCTGCACACTGCAGTTGT | + |
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Preference number: 1 (lower is better) Translates to: TVSVGWACSCIIPML*NSSSDAKQAAHCSC Trigger: ACAACTGCAGTGTGCAGCCTGTTTGGCGTCAGAGCTTGAATTTCACAGCATTGGTATAATGCATGAGCAAGCCCAGCCAACAGACACTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
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| 3UTR TCA 90 bp | TCCTTGGGTTCTTCGGCCGGCCAGACAGCCTTTCTGCTTTGTAAGTaGCTTCATTATAGCCATCAGCTAATCACTCCCTCAGCATACACT | + |
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Preference number: 1 (lower is better) Translates to: SLGSSAGQTAFLLCK*LHYSHQLITPSAYT Trigger: AGTGTATGCTGAGGGAGTGATTAGCTGATGGCTATAATGAAGTCACTTACAAAGCAGAAAGGCTGTCTGGCCGGCCGAAGAACCCAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
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| 3UTR GCA 90 bp | ATACAACAGTGTCTGTTGGCTGGGCTTGCTCATGCATTATACCAATaGTGTGAAATTCAAGCTCTGACGCCAAACAGGCTGCACACTGCA | + |
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Preference number: 1 (lower is better) Translates to: IQQCLLAGLAHALYQ*CEIQALTPNRLHTA Trigger: TGCAGTGTGCAGCCTGTTTGGCGTCAGAGCTTGAATTTCACAGCATTGGTATAATGCATGAGCAAGCCCAGCCAACAGACACTGTTGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
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| 3UTR TCA 90 bp | ACTAAGCAGGGAGTGGAGCATATTCACAGTGTCTTGATAATCTATTaGCTGAGTTGCGTTGTGACCATTAGCCCCAGGAGGGCCTTTATC | + |
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Preference number: 1 (lower is better) Translates to: TKQGVEHIHSVLIIY*LSCVVTISPRRAFI Trigger: GATAAAGGCCCTCCTGGGGCTAATGGTCACAACGCAACTCAGTCAATAGATTATCAAGACACTGTGAATATGCTCCACTCCCTGCTTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
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| 3UTR TCA 90 bp | TCAGCTAATCACTCCCTCAGCATACACTGGCATCTCCAGATTACCTaGCGGCAGACATACTTGCTCTGGCTTCAATTAACATGCTGTCAA | + |
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Preference number: 1 (lower is better) Translates to: SANHSLSIHWHLQIT*RQTYLLWLQLTCCQ Trigger: TTGACAGCATGTTAATTGAAGCCAGAGCAAGTATGTCTGCCGTCAGGTAATCTGGAGATGCCAGTGTATGCTGAGGGAGTGATTAGCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
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| 3UTR GCA 90 bp | AAGAAGACAAAGTACTGGACAAGCTGTAGGTTTTGTGTGCTAAGGTaGTTGTCTGGCTGCTGTGTTTTGGATCACTTGGGCGTTTGCTCA | + |
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Preference number: 1 (lower is better) Translates to: KKTKYWTSCRFCVLR*LSGCCVLDHLGVCS Trigger: TGAGCAAACGCCCAAGTGATCCAAAACACAGCAGCCAGACAAGCACCTTAGCACACAAAACCTACAGCTTGTCCAGTACTTTGTCTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
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| 3UTR TCA 90 bp | TTGGTGACACTGTCTTCTATGGAATTGTGCTTATCCCCTGCAGAGTaGACTTTAATGCGCATCTTTATCTCCTCTGGCTTGGAAGAAACT | + |
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Preference number: 1 (lower is better) Translates to: LVTLSSMELCLSPAE*TLMRIFISSGLEET Trigger: AGTTTCTTCCAAGCCAGAGGAGATAAAGATGCGCATTAAAGTTCACTCTGCAGGGGATAAGCACAATTCCATAGAAGACAGTGTCACCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
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| 3UTR GCA 90 bp | TTATACAGAAACTGGACAATATGCATGCTAGCTGGCAGGTATATCTaGTACGCCAAAATAATGCAATGCAGAAGTTCATGCAGAGCCCAC | + |
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Preference number: 1 (lower is better) Translates to: LYRNWTICMLAGRYI*YAKIMQCRSSCRAH Trigger: GTGGGCTCTGCATGAACTTCTGCATTGCATTATTTTGGCGTAGCAGATATACCTGCCAGCTAGCATGCATATTGTCCAGTTTCTGTATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
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| 3UTR TCA 90 bp | GTTGACATGCTCATTAATCCTGCGATAGTTGTGTCTGAAGAGGTCTaGGAAATCATATTGAGGATTGTCTGCTCCGACGTGTTTTCATCT | + |
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Preference number: 1 (lower is better) Translates to: VDMLINPAIVVSEEV*EIILRIVCSDVFSS Trigger: AGATGAAAACACGTCGGAGCAGACAATCCTCAATATGATTTCTCAGACCTCTTCAGACACAACTATCGCAGGATTAATGAGCATGTCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
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| 3UTR TCA 90 bp | TCCTCTCTTCTGATATGTTTAACACCAAAAGCATCCACAACCGCTTaGTATGCCCTCCACATTTTAGTTCTGGCAAGAAGAGGGAAGATA | + |
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Preference number: 1 (lower is better) Translates to: SSLLICLTPKASTTA*YALHILVLARRGKI Trigger: TATCTTCCCTCTTCTTGCCAGAACTAAAATGTGGAGGGCATATCAAGCGGTTGTGGATGCTTTTGGTGTTAAACATATCAGAAGAGAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
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| 3UTR CCA 90 bp | AGAATTCCAAATCACAATTTCATTGTCTTTAGTATCTTAACCCCCTaGCTTCTCCCAGTCCTAGTAGCACACATGGTCTGGTCTTTTCAG | + |
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Preference number: 1 (lower is better) Translates to: RIPNHNFIVFSILTP*LLPVLVAHMVWSFQ Trigger: CTGAAAAGACCAGACCATGTGTGCTACTAGGACTGGGAGAAGCCAGGGGGTTAAGATACTAAAGACAATGAAATTGTGATTTGGAATTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
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| 3UTR CCA 90 bp | TGGCTTCAATTAACATGCTGTCAAGCATCCCTCTCGACATTCACATaGCAACACAAAACCCATGAGTTTCTCTTCATACAACCAGGAATA | + |
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Preference number: 1 (lower is better) Translates to: WLQLTCCQASLSTFT*QHKTHEFLFIQPGI Trigger: TATTCCTGGTTGTATGAAGAGAAACTCATGGGTTTTGTGTTGCCATGTGAATGTCGAGAGGGATGCTTGACAGCATGTTAATTGAAGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
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| 3UTR TCA 90 bp | AACGTAAAAGTCAAGCAAACTCTTAGGAATGAAATTTACAGAAGTTaGGGCTCCAAGCCTGCTTACCACTCGCATTTCTTCTTGACAGTT | + |
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Preference number: 1 (lower is better) Translates to: NVKVKQTLRNEIYRS*GSKPAYHSHFFLTV Trigger: AACTGTCAAGAAGAAATGCGAGTGGTAAGCAGGCTTGGAGCCTCAACTTCTGTAAATTTCATTCCTAAGAGTTTGCTTGACTTTTACGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
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| 3UTR CCA 90 bp | AAGAAAGAAATGTTACTTCAAAAGTTACACATCAAGAAATATCACTaGTTTATCAGCAAGGAGCTCCTTGTTGTGCACAGCAACGGCAGG | + |
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Preference number: 1 (lower is better) Translates to: KKEMLLQKLHIKKYH*FISKELLVVHSNGR Trigger: CCTGCCGTTGCTGTGCACAACAAGGAGCTCCTTGCTGATAAACCAGTGATATTTCTTGATGTGTAACTTTTGAAGTAACATTTCTTTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
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| 3UTR CCA 90 bp | TTAGAAGCCATATTTATACAGAAACTGGACAATATGCATGCTAGCTaGCAGGTATATCTGCTACGCCAAAATAATGCAATGCAGAAGTTC | + |
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Preference number: 1 (lower is better) Translates to: LEAIFIQKLDNMHAS*QVYLLRQNNAMQKF Trigger: GAACTTCTGCATTGCATTATTTTGGCGTAGCAGATATACCTGCCAGCTAGCATGCATATTGTCCAGTTTCTGTATAAATATGGCTTCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
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| 3UTR GCA 90 bp | CTACAGAGTTCTAGGAAACTTAACAACAGGTTTACTGTGAAGAAATaGTATGACACCAAATATGACAACCTTTGTGCTAAGGGATTGCAT | + |
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Preference number: 1 (lower is better) Translates to: LQSSRKLNNRFTVKK*YDTKYDNLCAKGLH Trigger: ATGCAATCCCTTAGCACAAAGGTTGTCATATTTGGTGTCATAGCATTTCTTCACAGTAAACCTGTTGTTAAGTTTCCTAGAACTCTGTAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
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| 3UTR CCA 90 bp | ACACATACACACTCATGCAATGAACCAAATAACAGCAATGATCTGTaGCTAGGTAGCATTTTTCAGTCAGAAAGCTTGGCTTACAATTTT | + |
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Preference number: 1 (lower is better) Translates to: THTHSCNEPNNSNDL*LGSIFQSESLAYNF Trigger: AAAATTGTAAGCCAAGCTTTCTGACTGAAAAATGCTACCTAGCCACAGATCATTGCTGTTATTTGGTTCATTGCATGAGTGTGTATGTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
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| 3UTR GCA 90 bp | ACATGTCTCTTCTTATTGTCAAAGCCAACTATCTCTCTAGTAGAATaGGGAGATGTGAAAATGGTTAAGAATGGGAGGAATAAAGTAACA | + |
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Preference number: 1 (lower is better) Translates to: TCLFLLSKPTISLVE*GDVKMVKNGRNKVT Trigger: TGTTACTTTATTCCTCCCATTCTTAACCATTTTCACATCTCCGCATTCTACTAGAGAGATAGTTGGCTTTGACAATAAGAAGAGACATGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
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| 3UTR CAA 90 bp | GGAAGTGGTGGAGGGGGTTCTGATGGGAGGGGTGGTGGCCGAGGTTaGTCTGTAGTGCCAGATCTGGAGGAGATGGCACCAGCTCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: GSGGGGSDGRGGGRG*SVVPDLEEMAPALG Trigger: TCCCAGAGCTGGTGCCATCTCCTCCAGATCTGGCACTACAGACAAACCTCGGCCACCACCCCTCCCATCAGAACCCCCTCCACCACTTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
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| 3UTR-3UTR TCA 90 bp | TTCAAATGCAGGGGCCTGTGTGGGCTGAACCCCCTGGGCACTAAGCAGGGAGTGTCCAGCTGCCTCTTCTaGGCAGCCAACTCTTCCGCG | + |
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Preference number: 2 (lower is better) Translates to: FKCRGLCGLNPLGTKQGVSSCLF*AANSSA Trigger: CGCGGAAGAGTTGGCTGCTCAGAAGAGGCAGCTGGA...CACTCCCTGCTTAGTGCCCAGGGGGTTCAGCCCACACAGGCCCCTGCATTTGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
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| 3UTR-3UTR TCA 90 bp | TTCAAATGCAGGGGCCTGTGTGGGCTGAACCCCCTGGGCACTAAGCAGGGAGTGGCTGGCAGCTGTAAGTaGGAGTGCCTGTGTGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: FKCRGLCGLNPLGTKQGVAGSCK*ECLCEW Trigger: CCACTCACACAGGCACTCTCACTTACAGCTGCCAGC...CACTCCCTGCTTAGTGCCCAGGGGGTTCAGCCCACACAGGCCCCTGCATTTGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
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| 3UTR-3UTR CCA 90 bp | TTCAAATGCAGGGGCCTGTGTGGGCTGAACCCCCTGGGCACTAAGCAGGGAGTGCTGGCTTGGTTTTCATaGCAGCCTGGTACGCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: FKCRGLCGLNPLGTKQGVLAWFS*QPGTPS Trigger: GGAGGGCGTACCAGGCTGCCATGAAAACCAAGCCAG...CACTCCCTGCTTAGTGCCCAGGGGGTTCAGCCCACACAGGCCCCTGCATTTGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
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| 3UTR-3UTR GCA 90 bp | TGGGAGGGGTGGTGGCCGAGGTTTGTCTGTAGTGCCAGATCTGGAGGAGATGGCCAGATGGCACACTCTTaGTCGCCTGCTTCTGGGAAC | + |
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Preference number: 2 (lower is better) Translates to: WEGWWPRFVCSARSGGDGQMAHS*SPASGN Trigger: GTTCCCAGAAGCAGGCGAGCAAGAGTGTGCCATCTG...GCCATCTCCTCCAGATCTGGCACTACAGACAAACCTCGGCCACCACCCCTCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
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| 3UTR-3UTR GCA 90 bp | TTCAAATGCAGGGGCCTGTGTGGGCTGAACCCCCTGGGCACTAAGCAGGGAGTGCGACGTGTTTTCATCTaGTCCTCGGTCATCTGGCTT | + |
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Preference number: 2 (lower is better) Translates to: FKCRGLCGLNPLGTKQGVRRVFI*SSVIWL Trigger: AAGCCAGATGACCGAGGAGCAGATGAAAACACGTCG...CACTCCCTGCTTAGTGCCCAGGGGGTTCAGCCCACACAGGCCCCTGCATTTGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
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| 3UTR-3UTR CCA 90 bp | TTCAAATGCAGGGGCCTGTGTGGGCTGAACCCCCTGGGCACTAAGCAGGGAGTGCTGCTTTATCCCCACTaGCCACAGGGAGTCTCATTT | + |
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Preference number: 2 (lower is better) Translates to: FKCRGLCGLNPLGTKQGVLLYPH*PQGVSF Trigger: AAATGAGACTCCCTGTGGCCAGTGGGGATAAAGCAG...CACTCCCTGCTTAGTGCCCAGGGGGTTCAGCCCACACAGGCCCCTGCATTTGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
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| 3UTR CAA 90 bp | CTCACTAGTCCGATGACCCTGGGCAGCTTCGAGTTTAAACGGAGGTaGGGAAGACAGCCACCGCTCGCCCTGCAACATATCCACACTAGT | + |
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Preference number: 2 (lower is better) Translates to: LTSPMTLGSFEFKRR*GRQPPLALQHIHTS Trigger: ACTAGTGTGGATATGTTGCAGGGCGAGCGGTGGCTGTCTTCCCAACCTCCGTTTAAACTCGAAGCTGCCCAGGGTCATCGGACTAGTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
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| 3UTR CAA 90 bp | AGCTGTAGGTTTTGTGTGCTAAGGTGCTTGTCTGGCTGCTGTGTTTaGGATCACTTGGGCGTTTGCTCACGGGGCCGGCTGGCAGCTGTA | + |
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Preference number: 2 (lower is better) Translates to: SCRFCVLRCLSGCCV*DHLGVCSRGRLAAV Trigger: TACAGCTGCCAGCCGGCCCCGTGAGCAAACGCCCAAGTGATCCAAAACACAGCAGCCAGACAAGCACCTTAGCACACAAAACCTACAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
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| 3UTR-3UTR CCA 90 bp | TGTTCTCCAGCTGCCTCTTCTGAGCAGCCAACTCTTCCGCGTGCTTTGCACGGTTGCTCCTCGGTCATCTaGCTTGGTTTTCATGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: CSPAASSEQPTLPRALHGCSSVI*LGFHGS Trigger: GCTGCCATGAAAACCAAGCCAGATGACCGAGGAGCA...ACCGTGCAAAGCACGCGGAAGAGTTGGCTGCTCAGAAGAGGCAGCTGGAGAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
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| 3UTR-3UTR TCA 90 bp | ACAAGCAAAGCATACCCTTCTTCCCTTCAGAGACCTGAGCTTTCTCGCAAAGCCCACGCAAGCCTGCGGTaGAGGGAAGAGAGGACTCAC | + |
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Preference number: 2 (lower is better) Translates to: TSKAYPSSLQRPELSRKAHASLR*REERTH Trigger: GTGAGTCCTCTCTTCCCTTCACCGCAGGCTTGCGTG...GGCTTTGCGAGAAAGCTCAGGTCTCTGAAGGGAAGAAGGGTATGCTTTGCTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
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| 3UTR-3UTR GCA 90 bp | CTTAACCCCCTGGCTTCTCCCAGTCCTAGTAGCACACATGGTCTGGTCTTTTCAGCTACCACGCAAGCCTaGGGTGAAGGGAAGAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: LNPLASPSPSSTHGLVFSATTQA*GEGKRG Trigger: TCCTCTCTTCCCTTCACCGCAGGCTTGCGTGGTAGC...TGAAAAGACCAGACCATGTGTGCTACTAGGACTGGGAGAAGCCAGGGGGTTAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
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| 3UTR CAA 90 bp | AAGCCCAACATGAAAAGACCCCATTCTGTAGGAGAGAGGCCGGCCTaGCTTTATAGGCTTCTTCCTCAAGCCCACCTCCATGCTGCGTTG | + |
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Preference number: 2 (lower is better) Translates to: KPNMKRPHSVGERPA*LYRLLPQAHLHAAL Trigger: CAACGCAGCATGGAGGTGGGCTTGAGGAAGAAGCCTATAAAGCAAGGCCGGCCTCTCTCCTACAGAATGGGGTCTTTTCATGTTGGGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
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| 3UTR-3UTR TCA 90 bp | GGCTGTGAAAAGGGCAGGCCACTTGTGTCTGAGCTATGCCCAGGCAACTGGGTCTCCTGTTGCAAGGAATaGTCAACGCCAATAAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: GCEKGRPLVSELCPGNWVSCCKE*STPISA Trigger: AGCACTTATTGGCGTTGATCATTCCTTGCAACAGGA...GACCCAGTTGCCTGGGCATAGCTCAGACACAAGTGGCCTGCCCTTTTCACAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
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| 3UTR CAA 90 bp | ATTGTCTGCTCCGACGTGTTTTCATCTGCTCCTCGGTCATCTGGCTaGGTTTTCATGGCAGCCTGGTACGCCCTCCAATTCCGAATACGT | + |
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Preference number: 2 (lower is better) Translates to: IVCSDVFSSAPRSSG*VFMAAWYALQFRIR Trigger: ACGTATTCGGAATTGGAGGGCGTACCAGGCTGCCATGAAAACCAAGCCAGATGACCGAGGAGCAGATGAAAACACGTCGGAGCAGACAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
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| 3UTR-3UTR CCA 90 bp | TTGTCTGGCTGCTGTGTTTTGGATCACTTGGGCGTTTGCTCACGGGGCCGGCTGTTATCTCCTCTGGCTTaGAAGAAACTGCTTTATCCC | + |
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Preference number: 2 (lower is better) Translates to: LSGCCVLDHLGVCSRGRLLSPLA*KKLLYP Trigger: GGGATAAAGCAGTTTCTTCCAAGCCAGAGGAGATAA...CAGCCGGCCCCGTGAGCAAACGCCCAAGTGATCCAAAACACAGCAGCCAGACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
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| 3UTR-3UTR TCA 90 bp | TGTTCTCCAGCTGCCTCTTCTGAGCAGCCAACTCTTCCGCGTGCTTTGCACGGTTGCGATAGTTGTGTCTaGAGAGGTCTGAGAAATCAT | + |
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Preference number: 2 (lower is better) Translates to: CSPAASSEQPTLPRALHGCDSCV*RGLRNH Trigger: ATGATTTCTCAGACCTCTTCAGACACAACTATCGCA...ACCGTGCAAAGCACGCGGAAGAGTTGGCTGCTCAGAAGAGGCAGCTGGAGAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
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| 3UTR-3UTR TCA 90 bp | GTGAGTCCTCTGCTTCTCCTTGTGCTCGCGGCTCTTGGTGACACTGTCTTCTATAGCATACGCATACTGTaGCTTCACATTGGCCTCCAT | + |
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Preference number: 2 (lower is better) Translates to: VSPLLLLVLAALGDTVFYSIRIL*LHIGLH Trigger: ATGGAGGCCAATGTGAAGTCACAGTATGCGTATGCT...ATAGAAGACAGTGTCACCAAGAGCCGCGAGCACAAGGAGAAGCAGAGGACTCAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
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| 3UTR-3UTR CCA 90 bp | TTCAAATGCAGGGGCCTGTGTGGGCTGAACCCCCTGGGCACTAAGCAGGGAGTGAAGAAGACAAAGTACTaGACAAGCTGTAGGTTTTGT | + |
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Preference number: 2 (lower is better) Translates to: FKCRGLCGLNPLGTKQGVKKTKY*TSCRFC Trigger: ACAAAACCTACAGCTTGTCCAGTACTTTGTCTTCTT...CACTCCCTGCTTAGTGCCCAGGGGGTTCAGCCCACACAGGCCCCTGCATTTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
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| 3UTR CAA 90 bp | AAGACAAAGTACTGGACAAGCTGTAGGTTTTGTGTGCTAAGGTGCTaGTCTGGCTGCTGTGTTTTGGATCACTTGGGCGTTTGCTCACGG | + |
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Preference number: 2 (lower is better) Translates to: KTKYWTSCRFCVLRC*SGCCVLDHLGVCSR Trigger: CCGTGAGCAAACGCCCAAGTGATCCAAAACACAGCAGCCAGACAAGCACCTTAGCACACAAAACCTACAGCTTGTCCAGTACTTTGTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
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| 3UTR-3UTR TCA 90 bp | AAGGGCAGGCCACTTGTGTCTGAGCTATGCCCAGGCAACTGGGTCATTGTAGGACATTTTGAGAATAACTaGAGAATGGCTGTCGTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: KGRPLVSELCPGNWVIVGHFENN*RMAVVR Trigger: TCTCACGACAGCCATTCTTCAGTTATTCTCAAAATG...TCCTACAATGACCCAGTTGCCTGGGCATAGCTCAGACACAAGTGGCCTGCCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGGGCAGGCCACTTGTGTCTGAGCTATGCCCAGGCAACTGGGTCATTGTAGGAATATTGAGGATTGTCTaGTCCGACGTGTTTTCATCT | + |
|
Preference number: 2 (lower is better) Translates to: KGRPLVSELCPGNWVIVGILRIV*SDVFSS Trigger: AGATGAAAACACGTCGGAGCAGACAATCCTCAATAT...TCCTACAATGACCCAGTTGCCTGGGCATAGCTCAGACACAAGTGGCCTGCCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
||
| 3UTR CAA 90 bp | GCCTTGCTTTATAGGCTTCTTCCTCAAGCCCACCTCCATGCTGCGTaGAAAACACAAAAAGAAGTAACAGGGAAGTTTCCATACTGGCGC | + |
|
Preference number: 2 (lower is better) Translates to: ALLYRLLPQAHLHAA*KTQKEVTGKFPYWR Trigger: GCGCCAGTATGGAAACTTCCCTGTTACTTCTTTTTGTGTTTTCAACGCAGCATGGAGGTGGGCTTGAGGAAGAAGCCTATAAAGCAAGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| 3UTR-3UTR CCA 90 bp | TTCCAGTTCAGAACCCTAAATCACACCTACGTGAGTGAGGCTGCTGCACTGCTTCTCTCGACATTCACATaGCAACACAAAACCCATGAG | + |
|
Preference number: 2 (lower is better) Translates to: FQFRTLNHTYVSEAAALLLSTFT*QHKTHE Trigger: CTCATGGGTTTTGTGTTGCCATGTGAATGTCGAGAG...AAGCAGTGCAGCAGCCTCACTCACGTAGGTGTGATTTAGGGTTCTGAACTGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| 3UTR-3UTR TCA 90 bp | GCTGATTTGTCAGCCTTATCCAGAAAAGGACGTTCAGGGTTTTCTGAGCTCTCATCTGAGAAATCATATTaGGGATTGTCTGCTCCGACG | + |
|
Preference number: 2 (lower is better) Translates to: ADLSALSRKGRSGFSELSSEKSY*GLSAPT Trigger: CGTCGGAGCAGACAATCCTCAATATGATTTCTCAGA...TGAGAGCTCAGAAAACCCTGAACGTCCTTTTCTGGATAAGGCTGACAAATCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
||
| 3UTR-3UTR TCA 90 bp | TTCCAGTTCAGAACCCTAAATCACACCTACGTGAGTGAGGCTGCTGCACTGCTTTTTCTGCTTTGTAAGTaGCTTCATTATAGCCATCAG | + |
|
Preference number: 2 (lower is better) Translates to: FQFRTLNHTYVSEAAALLFLLCK*LHYSHQ Trigger: CTGATGGCTATAATGAAGTCACTTACAAAGCAGAAA...AAGCAGTGCAGCAGCCTCACTCACGTAGGTGTGATTTAGGGTTCTGAACTGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| 3UTR-3UTR CCA 90 bp | AGTCAGGTAATACAGATCAGTTTCCAGTTCAGAACCCTAAATCACACCTACGTGTACAACAGTGTCTGTTaGCTGGGCTTGCTCATGCAT | + |
|
Preference number: 2 (lower is better) Translates to: SQVIQISFQFRTLNHTYVYNSVC*LGLLMH Trigger: ATGCATGAGCAAGCCCAGCCAACAGACACTGTTGTA...CACGTAGGTGTGATTTAGGGTTCTGAACTGGAAACTGATCTGTATTACCTGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| 3UTR-3UTR GCA 90 bp | AGTCAGGTAATACAGATCAGTTTCCAGTTCAGAACCCTAAATCACACCTACGTGTGGCTTCAATTAACATaGTGTCAAGCATCCCTCTCG | + |
|
Preference number: 2 (lower is better) Translates to: SQVIQISFQFRTLNHTYVWLQLT*CQASLS Trigger: CGAGAGGGATGCTTGACAGCATGTTAATTGAAGCCA...CACGTAGGTGTGATTTAGGGTTCTGAACTGGAAACTGATCTGTATTACCTGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| 3UTR CAA 90 bp | TTCCTCTCTTCTGATATGTTTAACACCAAAAGCATCCACAACCGCTaGATATGCCCTCCACATTTTAGTTCTGGCAAGAAGAGGGAAGAT | + |
|
Preference number: 2 (lower is better) Translates to: FLSSDMFNTKSIHNR*ICPPHFSSGKKRED Trigger: ATCTTCCCTCTTCTTGCCAGAACTAAAATGTGGAGGGCATATCAAGCGGTTGTGGATGCTTTTGGTGTTAAACATATCAGAAGAGAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| 3UTR-3UTR CCA 90 bp | GATAATGGTCACTTCCATCCTATCATCATTCACCTAACAGCAGTAGAGATCCCAAACAGCAATGATCTGTaGCTAGGTAGCATTTTTCAG | + |
|
Preference number: 2 (lower is better) Translates to: DNGHFHPIIIHLTAVEIPNSNDL*LGSIFQ Trigger: CTGAAAAATGCTACCTAGCCACAGATCATTGCTGTT...TGGGATCTCTACTGCTGTTAGGTGAATGATGATAGGATGGAAGTGACCATTATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| 3UTR-3UTR CCA 90 bp | ACAAATACCAAGCCTAAAGTTAGTAATCATGATGACACATCTATCTTGCACAACTTTCTAGTCTGTCCTTaGCAAGCAGCACCCGTACAA | + |
|
Preference number: 2 (lower is better) Translates to: TNTKPKVSNHDDTSILHNFLVCP*QAAPVQ Trigger: TTGTACGGGTGCTGCTTGCCAAGGACAGACTAGAAA...GTTGTGCAAGATAGATGTGTCATCATGATTACTAACTTTAGGCTTGGTATTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| 3UTR-3UTR GCA 90 bp | ATGAAGGTAGGAGACACACATGGCTTAGAAGCCATATTTATACAGAAACTGGACATCTCTCTAGTAGAATaGGGAGATGTGAAAATGGTT | + |
|
Preference number: 2 (lower is better) Translates to: MKVGDTHGLEAIFIQKLDISLVE*GDVKMV Trigger: AACCATTTTCACATCTCCGCATTCTACTAGAGAGAT...GTCCAGTTTCTGTATAAATATGGCTTCTAAGCCATGTGTGTCTCCTACCTTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| 3UTR-3UTR GCA 90 bp | ACAAATACCAAGCCTAAAGTTAGTAATCATGATGACACATCTATCTTGCACAACAGCCCACCTCCATGCTaGGTTGAAAACACAAAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: TNTKPKVSNHDDTSILHNSPPPC*VENTKR Trigger: TCTTTTTGTGTTTTCAACGCAGCATGGAGGTGGGCT...GTTGTGCAAGATAGATGTGTCATCATGATTACTAACTTTAGGCTTGGTATTTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| 3UTR-3UTR GCA 90 bp | ACAAATACCAAGCCTAAAGTTAGTAATCATGATGACACATCTATCTTGCACAACAAACAGGCTGCACACTaGAGTTGTTTCCCACTAGAT | + |
|
Preference number: 2 (lower is better) Translates to: TNTKPKVSNHDDTSILHNKQAAH*SCFPLD Trigger: ATCTAGTGGGAAACAACTGCAGTGTGCAGCCTGTTT...GTTGTGCAAGATAGATGTGTCATCATGATTACTAACTTTAGGCTTGGTATTTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCAAATGCAGGGGCCTGTGTGGGCTGAACCCCCTGGGCACTAAGCAGGGAGTGAAAAGGGCAGGCCACTaGTGTCTGAGCTATGCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: FKCRGLCGLNPLGTKQGVKRAGH*CLSYAQ Trigger: CTGGGCATAGCTCAGACACAAGTGGCCTGCCCTTTT...CACTCCCTGCTTAGTGCCCAGGGGGTTCAGCCCACACAGGCCCCTGCATTTGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
||
| 3UTR TCA 72 bp | GAGTGGACAAATTCAAATGCAGGGGCCTGTGTGGGCTaGACCCCCTGGGCACTAAGCAGGGAGTGGAGCATA | + |
|
Preference number: 3 (lower is better) Translates to: EWTNSNAGACVG*TPWALSREWSI Trigger: TATGCTCCACTCCCTGCTTAGTGCCCAGGGGGTTCAGCCCACACAGGCCCCTGCATTTGAATTTGTCCACTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
||
| 3UTR GCA 72 bp | TTGTCTGGCTGCTGTGTTTTGGATCACTTGGGCGTTTaGTCACGGGGCCGGCTGGCAGCTGTAAGTGAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: LSGCCVLDHLGV*SRGRLAAVSES Trigger: ACTCTCACTTACAGCTGCCAGCCGGCCCCGTGAGCAAACGCCCAAGTGATCCAAAACACAGCAGCCAGACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
||
| 3UTR CCA 72 bp | CTGCTCCGACGTGTTTTCATCTGCTCCTCGGTCATCTaGCTTGGTTTTCATGGCAGCCTGGTACGCCCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: LLRRVFICSSVI*LGFHGSLVRPP Trigger: TGGAGGGCGTACCAGGCTGCCATGAAAACCAAGCCAGATGACCGAGGAGCAGATGAAAACACGTCGGAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCCAGTTCAGAACCCTAAATCACACCTACGTGAGTGAGGCTGCTGCACTGCTTGCAAGGAGCTCCTTGTaGTGCACAGCAACGGCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: FQFRTLNHTYVSEAAALLARSSL*CTATAG Trigger: GCCTGCCGTTGCTGTGCACAACAAGGAGCTCCTTGC...AAGCAGTGCAGCAGCCTCACTCACGTAGGTGTGATTTAGGGTTCTGAACTGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| 3UTR GCA 72 bp | AGAACTAGAAGCGAGAGGGCTGCTACCACGCAAGCCTaGGGTGAAGGGAAGAGAGGACTCACACTGTCAATA | + |
|
Preference number: 3 (lower is better) Translates to: RTRSERAATTQA*GEGKRGLTLSI Trigger: TATTGACAGTGTGAGTCCTCTCTTCCCTTCACCGCAGGCTTGCGTGGTAGCAGCCCTCTCGCTTCTAGTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| 3UTR CCA 72 bp | ACCTTAGCAGATGGCACACTCTTGCTCGCCTGCTTCTaGGAACCAAACGCACTGGAACCATCCTGTTGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: TLADGTLLLACF*EPNALEPSCCK Trigger: CTTGCAACAGGATGGTTCCAGTGCGTTTGGTTCCCAGAAGCAGGCGAGCAAGAGTGTGCCATCTGCTAAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGGGCAGGCCACTTGTGTCTGAGCTATGCCCAGGCAACTGGGTCATTGTAGGAACTGGAACCATCCTGTaGCAAGGAATGATCAACGCC | + |
|
Preference number: 3 (lower is better) Translates to: KGRPLVSELCPGNWVIVGTGTIL*QGMINA Trigger: GGCGTTGATCATTCCTTGCAACAGGATGGTTCCAGT...TCCTACAATGACCCAGTTGCCTGGGCATAGCTCAGACACAAGTGGCCTGCCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
||
| 3UTR TCA 72 bp | CAACTCTTCCGCGTGCTTTGCACGGTACTCCTTAAGTaGAACCTTAGCAGATGGCACACTCTTGCTCGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: QLFRVLCTVLLK*NLSRWHTLARL Trigger: CAGGCGAGCAAGAGTGTGCCATCTGCTAAGGTTTCACTTAAGGAGTACCGTGCAAAGCACGCGGAAGAGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
||
| 3UTR TCA 72 bp | GTGAGACAGGAGATTCTGGGCAGCATACGCATACTGTaGCTTCACATTGGCCTCCATGTTCTCCAGCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: VRQEILGSIRIL*LHIGLHVLQLP Trigger: AGGCAGCTGGAGAACATGGAGGCCAATGTGAAGTCACAGTATGCGTATGCTGCCCAGAATCTCCTGTCTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
||
| 3UTR TCA 72 bp | GAGTCCTCTGCTTCTCCTTGTGCTCGCGGCTCTTGGTaGCACTGTCTTCTATGGAATTGTGCTTATCCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: ESSASPCARGSW*HCLLWNCAYPL Trigger: CAGGGGATAAGCACAATTCCATAGAAGACAGTGTCACCAAGAGCCGCGAGCACAAGGAGAAGCAGAGGACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
||
| 3UTR GCA 72 bp | AGCTGTAGGTTTTGTGTGCTAAGGTGCTTGTCTGGCTaGTGTGTTTTGGATCACTTGGGCGTTTGCTCACGG | + |
|
Preference number: 3 (lower is better) Translates to: SCRFCVLRCLSG*CVLDHLGVCSR Trigger: CCGTGAGCAAACGCCCAAGTGATCCAAAACACAGCAGCCAGACAAGCACCTTAGCACACAAAACCTACAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
||
| 3UTR CCA 72 bp | TTTCATCTGCTCCTCGGTCATCTGGCTTGGTTTTCATaGCAGCCTGGTACGCCCTCCAATTCCGAATACGTT | + |
|
Preference number: 3 (lower is better) Translates to: FHLLLGHLAWFS*QPGTPSNSEYV Trigger: AACGTATTCGGAATTGGAGGGCGTACCAGGCTGCCATGAAAACCAAGCCAGATGACCGAGGAGCAGATGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
||
| 3UTR CCA 72 bp | CCCTGGCTTCTCCCAGTCCTAGTAGCACACATGGTCTaGTCTTTTCAGACAGGACAAGCAAAGCATACCCTT | + |
|
Preference number: 3 (lower is better) Translates to: PWLLPVLVAHMV*SFQTGQAKHTL Trigger: AAGGGTATGCTTTGCTTGTCCTGTCTGAAAAGACCAGACCATGTGTGCTACTAGGACTGGGAGAAGCCAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| 3UTR CCA 72 bp | CGGAGAGCTCACCCACTTAGGAAACAACTGGGAATTTaGACCACTCCATCAGGTACCATCACAGTACCACTC | + |
|
Preference number: 3 (lower is better) Translates to: RRAHPLRKQLGI*TTPSGTITVPL Trigger: GAGTGGTACTGTGATGGTACCTGATGGAGTGGTCCAAATTCCCAGTTGTTTCCTAAGTGGGTGAGCTCTCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCCAGTTCAGAACCCTAAATCACACCTACGTGAGTGAGGCTGCTGCACTGCTTATAGGACCCCTCCAATaGCCTTTGTCTAGAAGCGAG | + |
|
Preference number: 3 (lower is better) Translates to: FQFRTLNHTYVSEAAALLIGPLQ*PLSRSE Trigger: CTCGCTTCTAGACAAAGGCAATTGGAGGGGTCCTAT...AAGCAGTGCAGCAGCCTCACTCACGTAGGTGTGATTTAGGGTTCTGAACTGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| 3UTR TCA 72 bp | TCAACGCCAATAAGTGCTAAACTCTCACTAGTCCGATaGCCCTGGGCAGCTTCGAGTTTAAACGGAGGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: STPISAKLSLVR*PWAASSLNGGW Trigger: CCAACCTCCGTTTAAACTCGAAGCTGCCCAGGGTCATCGGACTAGTGAGAGTTTAGCACTTATTGGCGTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
||
| 3UTR TCA 72 bp | GGACCCCTCCAATTGCCTTTGTCTAGAAGCGAGGTGTaGGAGGTGAATTTTGTTGCAAAGGCTTCAGGAACC | + |
|
Preference number: 3 (lower is better) Translates to: GPLQLPLSRSEV*EVNFVAKASGT Trigger: GGTTCCTGAAGCCTTTGCAACAAAATTCACCTCTCACACCTCGCTTCTAGACAAAGGCAATTGGAGGGGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| 3UTR GCA 72 bp | CATATTGAGGATTGTCTGCTCCGACGTGTTTTCATCTaGTCCTCGGTCATCTGGCTTGGTTTTCATGGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: HIEDCLLRRVFI*SSVIWLGFHGS Trigger: GCTGCCATGAAAACCAAGCCAGATGACCGAGGAGCAGATGAAAACACGTCGGAGCAGACAATCCTCAATATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
||
| 3UTR TCA 72 bp | CACTCCCTCAGCATACACTGGCATCTCCAGATTACCTaGCGGCAGACATACTTGCTCTGGCTTCAATTAACA | + |
|
Preference number: 3 (lower is better) Translates to: HSLSIHWHLQIT*RQTYLLWLQLT Trigger: TGTTAATTGAAGCCAGAGCAAGTATGTCTGCCGTCAGGTAATCTGGAGATGCCAGTGTATGCTGAGGGAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| 3UTR TCA 72 bp | TCTTCGGCCGGCCAGACAGCCTTTCTGCTTTGTAAGTaGCTTCATTATAGCCATCAGCTAATCACTCCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: SSAGQTAFLLCK*LHYSHQLITPS Trigger: TGAGGGAGTGATTAGCTGATGGCTATAATGAAGTCACTTACAAAGCAGAAAGGCTGTCTGGCCGGCCGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| 3UTR GCA 72 bp | AAGTACTGGACAAGCTGTAGGTTTTGTGTGCTAAGGTaGTTGTCTGGCTGCTGTGTTTTGGATCACTTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: KYWTSCRFCVLR*LSGCCVLDHLG Trigger: GCCCAAGTGATCCAAAACACAGCAGCCAGACAAGCACCTTAGCACACAAAACCTACAGCTTGTCCAGTACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
||
| 3UTR GCA 72 bp | TGTCTGTTGGCTGGGCTTGCTCATGCATTATACCAATaGTGTGAAATTCAAGCTCTGACGCCAAACAGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: CLLAGLAHALYQ*CEIQALTPNRL Trigger: CAGCCTGTTTGGCGTCAGAGCTTGAATTTCACAGCATTGGTATAATGCATGAGCAAGCCCAGCCAACAGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| 3UTR TCA 72 bp | GGAGTGGAGCATATTCACAGTGTCTTGATAATCTATTaGCTGAGTTGCGTTGTGACCATTAGCCCCAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: GVEHIHSVLIIY*LSCVVTISPRR Trigger: CCTCCTGGGGCTAATGGTCACAACGCAACTCAGTCAATAGATTATCAAGACACTGTGAATATGCTCCACTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
||
| 3UTR TCA 72 bp | CTCATGCATTATACCAATGCTGTGAAATTCAAGCTCTaGCGCCAAACAGGCTGCACACTGCAGTTGTTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: LMHYTNAVKFKL*RQTGCTLQLFP Trigger: GGGAAACAACTGCAGTGTGCAGCCTGTTTGGCGTCAGAGCTTGAATTTCACAGCATTGGTATAATGCATGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| 3UTR CCA 72 bp | CTAGTAACTGCCTCAGTGTCTTTTCTAGTCTGTCCTTaGCAAGCAGCACCCGTACAACTTCTGTTTCCCTAT | + |
|
Preference number: 3 (lower is better) Translates to: LVTASVSFLVCP*QAAPVQLLFPY Trigger: ATAGGGAAACAGAAGTTGTACGGGTGCTGCTTGCCAAGGACAGACTAGAAAAGACACTGAGGCAGTTACTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| 3UTR TCA 72 bp | GAACCAAACGCACTGGAACCATCCTGTTGCAAGGAATaGTCAACGCCAATAAGTGCTAAACTCTCACTAGTC | + |
|
Preference number: 3 (lower is better) Translates to: EPNALEPSCCKE*STPISAKLSLV Trigger: GACTAGTGAGAGTTTAGCACTTATTGGCGTTGATCATTCCTTGCAACAGGATGGTTCCAGTGCGTTTGGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
||
| 3UTR TCA 72 bp | GAAACCTCAATCAATGCCAAGACATTTGAGGACGTATaGGGGTCACTGAGAGCTCAGTGGAATGGTAGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: ETSINAKTFEDV*GSLRAQWNGRK Trigger: CTTTCTACCATTCCACTGAGCTCTCAGTGACCCTCATACGTCCTCAAATGTCTTGGCATTGATTGAGGTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| 3UTR CCA 72 bp | AAAACACAAAAAGAAGTAACAGGGAAGTTTCCATACTaGCGCAGGAGTCAGGTCAGAACTAGAAGCGAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: KTQKEVTGKFPY*RRSQVRTRSER Trigger: CCTCTCGCTTCTAGTTCTGACCTGACTCCTGCGCCAGTATGGAAACTTCCCTGTTACTTCTTTTTGTGTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGAAGGTAGGAGACACACATGGCTTAGAAGCCATATTTATACAGAAACTGGACTTTTCTAGTCTGTCCTaGGCAAGCAGCACCCGTACA | + |
|
Preference number: 3 (lower is better) Translates to: MKVGDTHGLEAIFIQKLDFSSLS*ASSTRT Trigger: TGTACGGGTGCTGCTTGCCAAGGACAGACTAGAAAA...GTCCAGTTTCTGTATAAATATGGCTTCTAAGCCATGTGTGTCTCCTACCTTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| 3UTR TCA 72 bp | CTGTCTTCTATGGAATTGTGCTTATCCCCTGCAGAGTaGACTTTAATGCGCATCTTTATCTCCTCTGGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: LSSMELCLSPAE*TLMRIFISSGL Trigger: CAAGCCAGAGGAGATAAAGATGCGCATTAAAGTTCACTCTGCAGGGGATAAGCACAATTCCATAGAAGACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
||
| 3UTR TCA 72 bp | TCAATGCCAAGACATTTGAGGACGTATGAGGGTCACTaGGAGCTCAGTGGAATGGTAGAAAGCTATTTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: SMPRHLRTYEGH*ELSGMVESYFS Trigger: TGAGAAATAGCTTTCTACCATTCCACTGAGCTCTCAGTGACCCTCATACGTCCTCAAATGTCTTGGCATTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| 3UTR GCA 72 bp | GGTGACACTGTCTTCTATGGAATTGTGCTTATCCCCTaGAGAGTGAACTTTAATGCGCATCTTTATCTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: GDTVFYGIVLIP*RVNFNAHLYLL Trigger: GAGGAGATAAAGATGCGCATTAAAGTTCACTCTGCAGGGGATAAGCACAATTCCATAGAAGACAGTGTCACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
||
| 3UTR TCA 72 bp | GTCAAGCAAACTCTTAGGAATGAAATTTACAGAAGTTaGGGCTCCAAGCCTGCTTACCACTCGCATTTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: VKQTLRNEIYRS*GSKPAYHSHFF Trigger: GAAGAAATGCGAGTGGTAAGCAGGCTTGGAGCCTCAACTTCTGTAAATTTCATTCCTAAGAGTTTGCTTGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| 3UTR TCA 72 bp | ATCCCTCTCGACATTCACATGGCAACACAAAACCCATaGGTTTCTCTTCATACAACCAGGAATACACACTCA | + |
|
Preference number: 3 (lower is better) Translates to: IPLDIHMATQNP*VSLHTTRNTHS Trigger: TGAGTGTGTATTCCTGGTTGTATGAAGAGAAACTCATGGGTTTTGTGTTGCCATGTGAATGTCGAGAGGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| 3UTR GCA 72 bp | ATGTTTAACACCAAAAGCATCCACAACCGCTTGATATaGCCTCCACATTTTAGTTCTGGCAAGAAGAGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: MFNTKSIHNRLI*PPHFSSGKKRE Trigger: TTCCCTCTTCTTGCCAGAACTAAAATGTGGAGGGCATATCAAGCGGTTGTGGATGCTTTTGGTGTTAAACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGAAGGTAGGAGACACACATGGCTTAGAAGCCATATTTATACAGAAACTGGACAAGGTACTTTTCCGTTaGGGAAGGTCAGGATGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: MKVGDTHGLEAIFIQKLDKVLFR*GRSGWK Trigger: TTTCCATCCTGACCTTCCCAAACGGAAAAGTACCTT...GTCCAGTTTCTGTATAAATATGGCTTCTAAGCCATGTGTGTCTCCTACCTTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| 3UTR TCA 72 bp | CTGATATGTTTAACACCAAAAGCATCCACAACCGCTTaGTATGCCCTCCACATTTTAGTTCTGGCAAGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: LICLTPKASTTA*YALHILVLARR Trigger: TCTTCTTGCCAGAACTAAAATGTGGAGGGCATATCAAGCGGTTGTGGATGCTTTTGGTGTTAAACATATCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| 3UTR TCA 72 bp | AACAAACCTAAACCTCCCCACGAAATTGTACCTGAGTaGCATAAACCGGTAAAGGTGTGTTACTTCGCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: NKPKPPHEIVPE*HKPVKVCYFAF Trigger: AAAAGCGAAGTAACACACCTTTACCGGTTTATGTCACTCAGGTACAATTTCGTGGGGAGGTTTAGGTTTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| 3UTR CCA 72 bp | CACTCATGCAATGAACCAAATAACAGCAATGATCTGTaGCTAGGTAGCATTTTTCAGTCAGAAAGCTTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: HSCNEPNNSNDL*LGSIFQSESLA Trigger: AGCCAAGCTTTCTGACTGAAAAATGCTACCTAGCCACAGATCATTGCTGTTATTTGGTTCATTGCATGAGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| 3UTR TCA 72 bp | CTGACTTTAGATATACAACTACTACTTCTCACCCCTTaGAAGTATGAAGGTAGGAGACACACATGGCTTAGA | + |
|
Preference number: 3 (lower is better) Translates to: LTLDIQLLLLTP*KYEGRRHTWLR Trigger: TCTAAGCCATGTGTGTCTCCTACCTTCATACTTTCAAGGGGTGAGAAGTAGTAGTTGTATATCTAAAGTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| 3UTR GCA 72 bp | TTCTTATTGTCAAAGCCAACTATCTCTCTAGTAGAATaGGGAGATGTGAAAATGGTTAAGAATGGGAGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: FLLSKPTISLVE*GDVKMVKNGRN Trigger: ATTCCTCCCATTCTTAACCATTTTCACATCTCCGCATTCTACTAGAGAGATAGTTGGCTTTGACAATAAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| 3UTR GCA 72 bp | TCTAGGAAACTTAACAACAGGTTTACTGTGAAGAAATaGTATGACACCAAATATGACAACCTTTGTGCTAAG | + |
|
Preference number: 3 (lower is better) Translates to: SRKLNNRFTVKK*YDTKYDNLCAK Trigger: CTTAGCACAAAGGTTGTCATATTTGGTGTCATAGCATTTCTTCACAGTAAACCTGTTGTTAAGTTTCCTAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| 3UTR CAA 72 bp | GGAGGGGGTTCTGATGGGAGGGGTGGTGGCCGAGGTTaGTCTGTAGTGCCAGATCTGGAGGAGATGGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: GGGSDGRGGGRG*SVVPDLEEMAP Trigger: TGGTGCCATCTCCTCCAGATCTGGCACTACAGACAAACCTCGGCCACCACCCCTCCCATCAGAACCCCCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
||
| CDS-3UTR GCA 90 bp | TGGGAGGGGTGGTGGCCGAGGTTTGTCTGTAGTGCCAGATCTGGAGGAGATGGCGTGCAGGCAAGTGTGTaGCACCTTGATGACATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: WEGWWPRFVCSARSGGDGVQASV*HLDDML Trigger: GAGCATGTCATCAAGGTGGCACACACTTGCCTGCAC...GCCATCTCCTCCAGATCTGGCACTACAGACAAACCTCGGCCACCACCCCTCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
||
| 3UTR CAA 72 bp | CCGATGACCCTGGGCAGCTTCGAGTTTAAACGGAGGTaGGGAAGACAGCCACCGCTCGCCCTGCAACATATC | + |
|
Preference number: 4 (lower is better) Translates to: PMTLGSFEFKRR*GRQPPLALQHI Trigger: GATATGTTGCAGGGCGAGCGGTGGCTGTCTTCCCAACCTCCGTTTAAACTCGAAGCTGCCCAGGGTCATCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
||
| 3UTR CAA 72 bp | CACACCTACGTGAGTGAGGCTGCTGCACTGCTTTCCTaGGGTTCTTCGGCCGGCCAGACAGCCTTTCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: HTYVSEAAALLS*GSSAGQTAFLL Trigger: AAGCAGAAAGGCTGTCTGGCCGGCCGAAGAACCCAAGGAAAGCAGTGCAGCAGCCTCACTCACGTAGGTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR TCA 90 bp | GTGAGTCCTCTGCTTCTCCTTGTGCTCGCGGCTCTTGGTGACACTGTCTTCTATCCTCGTGTCAGGAAGTaGCTCCTGTGGGTGCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VSPLLLLVLAALGDTVFYPRVRK*LLWVQA Trigger: TGCCTGCACCCACAGGAGTCACTTCCTGACACGAGG...ATAGAAGACAGTGTCACCAAGAGCCGCGAGCACAAGGAGAAGCAGAGGACTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
||
| CDS-3UTR CCA 90 bp | TTCCAGTTCAGAACCCTAAATCACACCTACGTGAGTGAGGCTGCTGCACTGCTTATGCAGGGGCCTGTGTaGGCTGAACCCCCTGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: FQFRTLNHTYVSEAAALLMQGPV*AEPPGH Trigger: GTGCCCAGGGGGTTCAGCCCACACAGGCCCCTGCAT...AAGCAGTGCAGCAGCCTCACTCACGTAGGTGTGATTTAGGGTTCTGAACTGGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR TCA 90 bp | CTTAACCCCCTGGCTTCTCCCAGTCCTAGTAGCACACATGGTCTGGTCTTTTCACCTCGTGTCAGGAAGTaGCTCCTGTGGGTGCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LNPLASPSPSSTHGLVFSPRVRK*LLWVQA Trigger: TGCCTGCACCCACAGGAGTCACTTCCTGACACGAGG...TGAAAAGACCAGACCATGTGTGCTACTAGGACTGGGAGAAGCCAGGGGGTTAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| 3UTR CAA 72 bp | TTTTGTGTGCTAAGGTGCTTGTCTGGCTGCTGTGTTTaGGATCACTTGGGCGTTTGCTCACGGGGCCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FCVLRCLSGCCV*DHLGVCSRGRL Trigger: CAGCCGGCCCCGTGAGCAAACGCCCAAGTGATCCAAAACACAGCAGCCAGACAAGCACCTTAGCACACAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
||
| CDS-3UTR TCA 90 bp | TTCCAGTTCAGAACCCTAAATCACACCTACGTGAGTGAGGCTGCTGCACTGCTTTCCAGCTGCCTCTTCTaGGCAGCCAACTCTTCCGCG | + |
|
Preference number: 4 (lower is better) Translates to: FQFRTLNHTYVSEAAALLSSCLF*AANSSA Trigger: CGCGGAAGAGTTGGCTGCTCAGAAGAGGCAGCTGGA...AAGCAGTGCAGCAGCCTCACTCACGTAGGTGTGATTTAGGGTTCTGAACTGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| 3UTR CAA 72 bp | TCCGACGTGTTTTCATCTGCTCCTCGGTCATCTGGCTaGGTTTTCATGGCAGCCTGGTACGCCCTCCAATTC | + |
|
Preference number: 4 (lower is better) Translates to: SDVFSSAPRSSG*VFMAAWYALQF Trigger: GAATTGGAGGGCGTACCAGGCTGCCATGAAAACCAAGCCAGATGACCGAGGAGCAGATGAAAACACGTCGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
||
| CDS-3UTR TCA 90 bp | CTTAACCCCCTGGCTTCTCCCAGTCCTAGTAGCACACATGGTCTGGTCTTTTCAGTGCTTCCCGTCAGTTaGGACTGGGATCTCCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LNPLASPSPSSTHGLVFSVLPVS*DWDLPV Trigger: AACTGGGAGATCCCAGTCTCAACTGACGGGAAGCAC...TGAAAAGACCAGACCATGTGTGCTACTAGGACTGGGAGAAGCCAGGGGGTTAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR TCA 90 bp | TTCCAGTTCAGAACCCTAAATCACACCTACGTGAGTGAGGCTGCTGCACTGCTTGCTGGCAGCTGTAAGTaGGAGTGCCTGTGTGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FQFRTLNHTYVSEAAALLAGSCK*ECLCEW Trigger: CCACTCACACAGGCACTCTCACTTACAGCTGCCAGC...AAGCAGTGCAGCAGCCTCACTCACGTAGGTGTGATTTAGGGTTCTGAACTGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR TCA 90 bp | TCCCTTCAGAGACCTGAGCTTTCTCGCAAAGCCCAACATGAAAAGACCCCATTCCAGGCCACTTGTGTCTaGGCTATGCCCAGGCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: SLQRPELSRKAQHEKTPFQATCV*AMPRQL Trigger: CAGTTGCCTGGGCATAGCTCAGACACAAGTGGCCTG...GAATGGGGTCTTTTCATGTTGGGCTTTGCGAGAAAGCTCAGGTCTCTGAAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR CCA 90 bp | TTCCAGTTCAGAACCCTAAATCACACCTACGTGAGTGAGGCTGCTGCACTGCTTCTGGCTTGGTTTTCATaGCAGCCTGGTACGCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FQFRTLNHTYVSEAAALLLAWFS*QPGTPS Trigger: GGAGGGCGTACCAGGCTGCCATGAAAACCAAGCCAG...AAGCAGTGCAGCAGCCTCACTCACGTAGGTGTGATTTAGGGTTCTGAACTGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR CCA 90 bp | CTTAACCCCCTGGCTTCTCCCAGTCCTAGTAGCACACATGGTCTGGTCTTTTCACTATGCCCAGGCAACTaGGTCATTGTAGGAAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LNPLASPSPSSTHGLVFSLCPGN*VIVGRG Trigger: CCCCCTTCCTACAATGACCCAGTTGCCTGGGCATAG...TGAAAAGACCAGACCATGTGTGCTACTAGGACTGGGAGAAGCCAGGGGGTTAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR GCA 90 bp | GTGAGTCCTCTGCTTCTCCTTGTGCTCGCGGCTCTTGGTGACACTGTCTTCTATTCTGTGCTAAGTCCTTaGTTGCTCGAACAAGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VSPLLLLVLAALGDTVFYSVLSP*LLEQAG Trigger: CCCAGCTTGTTCGAGCAAGCAAGGACTTAGCACAGA...ATAGAAGACAGTGTCACCAAGAGCCGCGAGCACAAGGAGAAGCAGAGGACTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
||
| CDS-3UTR GCA 90 bp | CGACATAATCCCACCTCTCTAATACCAGCACGAACTGTAGATGTGAGGCAGCAGCAGATGGCACACTCTTaGTCGCCTGCTTCTGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RHNPTSLIPARTVDVRQQQMAHS*SPASGN Trigger: GTTCCCAGAAGCAGGCGAGCAAGAGTGTGCCATCTG...CTGCTGCCTCACATCTACAGTTCGTGCTGGTATTAGAGAGGTGGGATTATGTCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR TCA 90 bp | TTCCAGTTCAGAACCCTAAATCACACCTACGTGAGTGAGGCTGCTGCACTGCTTGAAGAATGGCTGTCGTaGGACAGGAGATTCTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FQFRTLNHTYVSEAAALLEEWLS*DRRFWA Trigger: TGCCCAGAATCTCCTGTCTCACGACAGCCATTCTTC...AAGCAGTGCAGCAGCCTCACTCACGTAGGTGTGATTTAGGGTTCTGAACTGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR TCA 90 bp | AAGAGAGGACTCACACTGTCAATACATGTCTCTTCTTATTGTCAAAGCCAACTAGGGGCCTGTGTGGGCTaGACCCCCTGGGCACTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KRGLTLSIHVSSYCQSQLGACVG*TPWALS Trigger: GCTTAGTGCCCAGGGGGTTCAGCCCACACAGGCCCC...TAGTTGGCTTTGACAATAAGAAGAGACATGTATTGACAGTGTGAGTCCTCTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR GCA 90 bp | TGTTCTCCAGCTGCCTCTTCTGAGCAGCCAACTCTTCCGCGTGCTTTGCACGGTGCCACCTTGATGACATaGTCCAATTTCTTTGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: CSPAASSEQPTLPRALHGATLMT*SNFFGC Trigger: ACAACCAAAGAAATTGGAGCATGTCATCAAGGTGGC...ACCGTGCAAAGCACGCGGAAGAGTTGGCTGCTCAGAAGAGGCAGCTGGAGAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
||
| CDS-3UTR GCA 90 bp | ACAGGACAAGCAAAGCATACCCTTCTTCCCTTCAGAGACCTGAGCTTTCTCGCAACACTCTTGCTCGCCTaGTTCTGGGAACCAAACGCA | + |
|
Preference number: 4 (lower is better) Translates to: TGQAKHTLLPFRDLSFLATLLLA*FWEPNA Trigger: TGCGTTTGGTTCCCAGAAGCAGGCGAGCAAGAGTGT...TGCGAGAAAGCTCAGGTCTCTGAAGGGAAGAAGGGTATGCTTTGCTTGTCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR CCA 90 bp | TTCCAGTTCAGAACCCTAAATCACACCTACGTGAGTGAGGCTGCTGCACTGCTTTGCTCCTCGGTCATCTaGCTTGGTTTTCATGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FQFRTLNHTYVSEAAALLCSSVI*LGFHGS Trigger: GCTGCCATGAAAACCAAGCCAGATGACCGAGGAGCA...AAGCAGTGCAGCAGCCTCACTCACGTAGGTGTGATTTAGGGTTCTGAACTGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR CCA 90 bp | ACAAGCAAAGCATACCCTTCTTCCCTTCAGAGACCTGAGCTTTCTCGCAAAGCCTTGCTCGCCTGCTTCTaGGAACCAAACGCACTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TSKAYPSSLQRPELSRKALLACF*EPNALE Trigger: TTCCAGTGCGTTTGGTTCCCAGAAGCAGGCGAGCAA...GGCTTTGCGAGAAAGCTCAGGTCTCTGAAGGGAAGAAGGGTATGCTTTGCTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| 3UTR CAA 72 bp | ATGAAAAGACCCCATTCTGTAGGAGAGAGGCCGGCCTaGCTTTATAGGCTTCTTCCTCAAGCCCACCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: MKRPHSVGERPA*LYRLLPQAHLH Trigger: ATGGAGGTGGGCTTGAGGAAGAAGCCTATAAAGCAAGGCCGGCCTCTCTCCTACAGAATGGGGTCTTTTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR TCA 90 bp | TTGTCTGGCTGCTGTGTTTTGGATCACTTGGGCGTTTGCTCACGGGGCCGGCTGACATGTGTATGTGGGTaGTCAATTGTTAGTTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LSGCCVLDHLGVCSRGRLTCVCG*SIVSSN Trigger: GTTTGAACTAACAATTGATCACCCACATACACATGT...CAGCCGGCCCCGTGAGCAAACGCCCAAGTGATCCAAAACACAGCAGCCAGACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
||
| CDS-3UTR TCA 90 bp | TCCCTTCAGAGACCTGAGCTTTCTCGCAAAGCCCAACATGAAAAGACCCCATTCTTTACAGCTAGGCTGTaGAAAGGGCAGGCCACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SLQRPELSRKAQHEKTPFFTARL*KGQATC Trigger: ACAAGTGGCCTGCCCTTTTCACAGCCTAGCTGTAAA...GAATGGGGTCTTTTCATGTTGGGCTTTGCGAGAAAGCTCAGGTCTCTGAAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR GCA 90 bp | ACAAGCAAAGCATACCCTTCTTCCCTTCAGAGACCTGAGCTTTCTCGCAAAGCCACATACTCCCACCAGTaGTTCCCGTCAGTTGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: TSKAYPSSLQRPELSRKATYSHQ*FPSVET Trigger: AGTCTCAACTGACGGGAAGCACTGGTGGGAGTATGT...GGCTTTGCGAGAAAGCTCAGGTCTCTGAAGGGAAGAAGGGTATGCTTTGCTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR GCA 90 bp | TCCCTTCAGAGACCTGAGCTTTCTCGCAAAGCCCAACATGAAAAGACCCCATTCCGACGTGTTTTCATCTaGTCCTCGGTCATCTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLQRPELSRKAQHEKTPFRRVFI*SSVIWL Trigger: AAGCCAGATGACCGAGGAGCAGATGAAAACACGTCG...GAATGGGGTCTTTTCATGTTGGGCTTTGCGAGAAAGCTCAGGTCTCTGAAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| 3UTR CAA 72 bp | AGAAATATCACTGGTTTATCAGCAAGGAGCTCCTTGTaGTGCACAGCAACGGCAGGCGCTGCAGACAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: RNITGLSARSSL*CTATAGAADNS Trigger: TGAGTTGTCTGCAGCGCCTGCCGTTGCTGTGCACAACAAGGAGCTCCTTGCTGATAAACCAGTGATATTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| 3UTR CAA 72 bp | TCAAGAAATATCACTGGTTTATCAGCAAGGAGCTCCTaGTTGTGCACAGCAACGGCAGGCGCTGCAGACAAC | + |
|
Preference number: 4 (lower is better) Translates to: SRNITGLSARSS*LCTATAGAADN Trigger: GTTGTCTGCAGCGCCTGCCGTTGCTGTGCACAACAAGGAGCTCCTTGCTGATAAACCAGTGATATTTCTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR GCA 90 bp | TTTTCAGACAGGACAAGCAAAGCATACCCTTCTTCCCTTCAGAGACCTGAGCTTCCCAGTTGGACCACTTaGAAGCCAGATGGATGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FSDRTSKAYPSSLQRPELPSWTT*KPDGCR Trigger: TCTGCATCCATCTGGCTTGCAAGTGGTCCAACTGGG...AAGCTCAGGTCTCTGAAGGGAAGAAGGGTATGCTTTGCTTGTCCTGTCTGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR GCA 90 bp | AAGAGAGGACTCACACTGTCAATACATGTCTCTTCTTATTGTCAAAGCCAACTAGATCACTTGGGCGTTTaGTCACGGGGCCGGCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KRGLTLSIHVSSYCQSQLDHLGV*SRGRLA Trigger: TGCCAGCCGGCCCCGTGAGCAAACGCCCAAGTGATC...TAGTTGGCTTTGACAATAAGAAGAGACATGTATTGACAGTGTGAGTCCTCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR GCA 90 bp | TTCCAGTTCAGAACCCTAAATCACACCTACGTGAGTGAGGCTGCTGCACTGCTTAGGTGCTTGTCTGGCTaGTGTGTTTTGGATCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: FQFRTLNHTYVSEAAALLRCLSG*CVLDHL Trigger: CAAGTGATCCAAAACACAGCAGCCAGACAAGCACCT...AAGCAGTGCAGCAGCCTCACTCACGTAGGTGTGATTTAGGGTTCTGAACTGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| 3UTR CAA 72 bp | TACTGGACAAGCTGTAGGTTTTGTGTGCTAAGGTGCTaGTCTGGCTGCTGTGTTTTGGATCACTTGGGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: YWTSCRFCVLRC*SGCCVLDHLGV Trigger: AACGCCCAAGTGATCCAAAACACAGCAGCCAGACAAGCACCTTAGCACACAAAACCTACAGCTTGTCCAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
||
| CDS-3UTR TCA 90 bp | CTTAACCCCCTGGCTTCTCCCAGTCCTAGTAGCACACATGGTCTGGTCTTTTCATGCGATAGTTGTGTCTaGAGAGGTCTGAGAAATCAT | + |
|
Preference number: 4 (lower is better) Translates to: LNPLASPSPSSTHGLVFSCDSCV*RGLRNH Trigger: ATGATTTCTCAGACCTCTTCAGACACAACTATCGCA...TGAAAAGACCAGACCATGTGTGCTACTAGGACTGGGAGAAGCCAGGGGGTTAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR TCA 90 bp | GGACTCACACTGTCAATACATGTCTCTTCTTATTGTCAAAGCCAACTATCTCTCCTCTCACTAGTCCGATaGCCCTGGGCAGCTTCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GLTLSIHVSSYCQSQLSLLSLVR*PWAASS Trigger: ACTCGAAGCTGCCCAGGGTCATCGGACTAGTGAGAG...GAGAGATAGTTGGCTTTGACAATAAGAAGAGACATGTATTGACAGTGTGAGTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR TCA 90 bp | ACAGGACAAGCAAAGCATACCCTTCTTCCCTTCAGAGACCTGAGCTTTCTCGCATCCTGTTGCAAGGAATaGTCAACGCCAATAAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TGQAKHTLLPFRDLSFLASCCKE*STPISA Trigger: AGCACTTATTGGCGTTGATCATTCCTTGCAACAGGA...TGCGAGAAAGCTCAGGTCTCTGAAGGGAAGAAGGGTATGCTTTGCTTGTCCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR GCA 90 bp | GAAAACACAAAAAGAAGTAACAGGGAAGTTTCCATACTGGCGCAGGAGTCAGGTGTGCAGGCAAGTGTGTaGCACCTTGATGACATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ENTKRSNREVSILAQESGVQASV*HLDDML Trigger: GAGCATGTCATCAAGGTGGCACACACTTGCCTGCAC...ACCTGACTCCTGCGCCAGTATGGAAACTTCCCTGTTACTTCTTTTTGTGTTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR GCA 90 bp | GAAAACACAAAAAGAAGTAACAGGGAAGTTTCCATACTGGCGCAGGAGTCAGGTATGATCAAATACTGCTaGCCCAGTCTCTTCCGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ENTKRSNREVSILAQESGMIKYC*PSLFRG Trigger: CCCCCGGAAGAGACTGGGGCAGCAGTATTTGATCAT...ACCTGACTCCTGCGCCAGTATGGAAACTTCCCTGTTACTTCTTTTTGTGTTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR CCA 90 bp | TTCCAGTTCAGAACCCTAAATCACACCTACGTGAGTGAGGCTGCTGCACTGCTTCTTGGCAATCTTGGCTaGATGATCAAATACTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FQFRTLNHTYVSEAAALLLGNLG*MIKYCC Trigger: GCAGCAGTATTTGATCATCCAGCCAAGATTGCCAAG...AAGCAGTGCAGCAGCCTCACTCACGTAGGTGTGATTTAGGGTTCTGAACTGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR TCA 90 bp | GATAATGGTCACTTCCATCCTATCATCATTCACCTAACAGCAGTAGAGATCCCAGCTCGCGGCTCTTGGTaGCACTGTCTTCTATGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: DNGHFHPIIIHLTAVEIPARGSW*HCLLWN Trigger: ATTCCATAGAAGACAGTGTCACCAAGAGCCGCGAGC...TGGGATCTCTACTGCTGTTAGGTGAATGATGATAGGATGGAAGTGACCATTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR TCA 90 bp | ATGAAGGTAGGAGACACACATGGCTTAGAAGCCATATTTATACAGAAACTGGACGTGAGAGTGCCTGTGTaGGTGGTGGTTGTGATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: MKVGDTHGLEAIFIQKLDVRVPV*VVVVMV Trigger: CACCATCACAACCACCACTCACACAGGCACTCTCAC...GTCCAGTTTCTGTATAAATATGGCTTCTAAGCCATGTGTGTCTCCTACCTTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR CCA 90 bp | GAAAACACAAAAAGAAGTAACAGGGAAGTTTCCATACTGGCGCAGGAGTCAGGTCTGCTTTATCCCCACTaGCCACAGGGAGTCTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: ENTKRSNREVSILAQESGLLYPH*PQGVSF Trigger: AAATGAGACTCCCTGTGGCCAGTGGGGATAAAGCAG...ACCTGACTCCTGCGCCAGTATGGAAACTTCCCTGTTACTTCTTTTTGTGTTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| 3UTR CAA 72 bp | ACTAGTAACTGCCTCAGTGTCTTTTCTAGTCTGTCCTaGGCAAGCAGCACCCGTACAACTTCTGTTTCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: TSNCLSVFSSLS*ASSTRTTSVSL Trigger: TAGGGAAACAGAAGTTGTACGGGTGCTGCTTGCCAAGGACAGACTAGAAAAGACACTGAGGCAGTTACTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| 3UTR CAA 72 bp | AGTAAGACATATTCCTTCCCATACATTCTCTCTCCGTaGGGCCAGTGTGTCAGCACTAGTAACTGCCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SKTYSFPYILSP*GQCVSTSNCLS Trigger: ACTGAGGCAGTTACTAGTGCTGACACACTGGCCCAACGGAGAGAGAATGTATGGGAAGGAATATGTCTTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR GCA 90 bp | AGTCAGGTAATACAGATCAGTTTCCAGTTCAGAACCCTAAATCACACCTACGTGTGGCTTGGAAGAAACTaGTTTATCCCCACTGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SQVIQISFQFRTLNHTYVWLGRN*FIPTGH Trigger: GTGGCCAGTGGGGATAAAGCAGTTTCTTCCAAGCCA...CACGTAGGTGTGATTTAGGGTTCTGAACTGGAAACTGATCTGTATTACCTGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR GCA 90 bp | TGCAACATATCCACACTAGTTAGACTGCTCGATGACTCCTCAGAGGAAGGCAGGGTCAATTCTGTTGGTTaGCATGAAGTAAGATGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CNISTLVRLLDDSSEEGRVNSVG*HEVRCL Trigger: CAGACATCTTACTTCATGGCAACCAACAGAATTGAC...CCTGCCTTCCTCTGAGGAGTCATCGAGCAGTCTAACTAGTGTGGATATGTTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
||
| CDS-3UTR CCA 90 bp | GGACTCACACTGTCAATACATGTCTCTTCTTATTGTCAAAGCCAACTATCTCTCAGTTTAAACGGAGGTTaGGAAGACAGCCACCGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GLTLSIHVSSYCQSQLSLSLNGG*EDSHRS Trigger: CGAGCGGTGGCTGTCTTCCCAACCTCCGTTTAAACT...GAGAGATAGTTGGCTTTGACAATAAGAAGAGACATGTATTGACAGTGTGAGTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR CCA 90 bp | ACAAGCAAAGCATACCCTTCTTCCCTTCAGAGACCTGAGCTTTCTCGCAAAGCCTACTCTTGGCAATCTTaGCTGGATGATCAAATACTG | + |
|
Preference number: 4 (lower is better) Translates to: TSKAYPSSLQRPELSRKAYSWQS*LDDQIL Trigger: CAGTATTTGATCATCCAGCCAAGATTGCCAAGAGTA...GGCTTTGCGAGAAAGCTCAGGTCTCTGAAGGGAAGAAGGGTATGCTTTGCTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR TCA 90 bp | ACAAGCAAAGCATACCCTTCTTCCCTTCAGAGACCTGAGCTTTCTCGCAAAGCCACATGTGTATGTGGGTaGTCAATTGTTAGTTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: TSKAYPSSLQRPELSRKATCVCG*SIVSSN Trigger: GTTTGAACTAACAATTGATCACCCACATACACATGT...GGCTTTGCGAGAAAGCTCAGGTCTCTGAAGGGAAGAAGGGTATGCTTTGCTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR TCA 90 bp | AGTCAGGTAATACAGATCAGTTTCCAGTTCAGAACCCTAAATCACACCTACGTGAGCATACGCATACTGTaGCTTCACATTGGCCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SQVIQISFQFRTLNHTYVSIRIL*LHIGLH Trigger: ATGGAGGCCAATGTGAAGTCACAGTATGCGTATGCT...CACGTAGGTGTGATTTAGGGTTCTGAACTGGAAACTGATCTGTATTACCTGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR GCA 90 bp | TGCAATGAACCAAATAACAGCAATGATCTGTGGCTAGGTAGCATTTTTCAGTCAGTGGACAAATTCAAATaGAGGGGCCTGTGTGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CNEPNNSNDLWLGSIFQSVDKFK*RGLCGL Trigger: CAGCCCACACAGGCCCCTGCATTTGAATTTGTCCAC...TGACTGAAAAATGCTACCTAGCCACAGATCATTGCTGTTATTTGGTTCATTGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR CCA 90 bp | AATCTGAATACAACAGTGTCTGTTGGCTGGGCTTGCTCATGCATTATACCAATGGCTAAGGTGCTTGTCTaGCTGCTGTGTTTTGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: NLNTTVSVGWACSCIIPMAKVLV*LLCFGS Trigger: TGATCCAAAACACAGCAGCCAGACAAGCACCTTAGC...CATTGGTATAATGCATGAGCAAGCCCAGCCAACAGACACTGTTGTATTCAGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR TCA 90 bp | AATCTGAATACAACAGTGTCTGTTGGCTGGGCTTGCTCATGCATTATACCAATGACGTTCAGGGTTTTCTaGGCTCTCAATGGGCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: NLNTTVSVGWACSCIIPMTFRVF*ALNGHF Trigger: AAAATGCCCATTGAGAGCTCAGAAAACCCTGAACGT...CATTGGTATAATGCATGAGCAAGCCCAGCCAACAGACACTGTTGTATTCAGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR TCA 90 bp | AAGAGAGGACTCACACTGTCAATACATGTCTCTTCTTATTGTCAAAGCCAACTAGCAATCTTGGCTGGATaGTCAAATACTGCTGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KRGLTLSIHVSSYCQSQLAILAG*SNTAAP Trigger: TGGGGCAGCAGTATTTGATCATCCAGCCAAGATTGC...TAGTTGGCTTTGACAATAAGAAGAGACATGTATTGACAGTGTGAGTCCTCTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR GCA 90 bp | AGTCAGGTAATACAGATCAGTTTCCAGTTCAGAACCCTAAATCACACCTACGTGATGCAGGCTGTTGGTTaGCATGAAGTAAGATGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SQVIQISFQFRTLNHTYVMQAVG*HEVRCL Trigger: CAGACATCTTACTTCATGGCAACCAACAGCCTGCAT...CACGTAGGTGTGATTTAGGGTTCTGAACTGGAAACTGATCTGTATTACCTGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR GCA 90 bp | AATCTGAATACAACAGTGTCTGTTGGCTGGGCTTGCTCATGCATTATACCAATGCTAAATGTGGTCAAATaGAGGCTGTTGGTTGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: NLNTTVSVGWACSCIIPMLNVVK*RLLVAM Trigger: CATGGCAACCAACAGCCTGCATTTGACCACATTTAG...CATTGGTATAATGCATGAGCAAGCCCAGCCAACAGACACTGTTGTATTCAGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR GCA 90 bp | GTTCAGGACCTACGCACTGACTTAGAAGCAGACACTGCATCTATCTATAGACAGATATTGAGGATTGTCTaGTCCGACGTGTTTTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: VQDLRTDLEADTASIYRQILRIV*SDVFSS Trigger: AGATGAAAACACGTCGGAGCAGACAATCCTCAATAT...CTGTCTATAGATAGATGCAGTGTCTGCTTCTAAGTCAGTGCGTAGGTCCTGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR TCA 90 bp | GAAAACACAAAAAGAAGTAACAGGGAAGTTTCCATACTGGCGCAGGAGTCAGGTCATTTTGAGAATAACTaGAGAATGGCTGTCGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ENTKRSNREVSILAQESGHFENN*RMAVVR Trigger: TCTCACGACAGCCATTCTTCAGTTATTCTCAAAATG...ACCTGACTCCTGCGCCAGTATGGAAACTTCCCTGTTACTTCTTTTTGTGTTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR GCA 90 bp | GGACTCACACTGTCAATACATGTCTCTTCTTATTGTCAAAGCCAACTATCTCTCACAGGAGGTGTGTACTaGAGGCTAAATGTGGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GLTLSIHVSSYCQSQLSLTGGVY*RLNVVK Trigger: TTTGACCACATTTAGCCTGCAGTACACACCTCCTGT...GAGAGATAGTTGGCTTTGACAATAAGAAGAGACATGTATTGACAGTGTGAGTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR GCA 90 bp | ATGAAGGTAGGAGACACACATGGCTTAGAAGCCATATTTATACAGAAACTGGACTTTTGTGTGCTAAGGTaGTTGTCTGGCTGCTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: MKVGDTHGLEAIFIQKLDFCVLR*LSGCCV Trigger: AACACAGCAGCCAGACAAGCACCTTAGCACACAAAA...GTCCAGTTTCTGTATAAATATGGCTTCTAAGCCATGTGTGTCTCCTACCTTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR CCA 90 bp | ACAAATACCAAGCCTAAAGTTAGTAATCATGATGACACATCTATCTTGCACAACGTTCCAAGGTCACAGTaGCGTCAACATACTCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: TNTKPKVSNHDDTSILHNVPRSQ*RQHTPT Trigger: GGTGGGAGTATGTTGACGCCACTGTGACCTTGGAAC...GTTGTGCAAGATAGATGTGTCATCATGATTACTAACTTTAGGCTTGGTATTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR CCA 90 bp | GTTCAGGACCTACGCACTGACTTAGAAGCAGACACTGCATCTATCTATAGACAGAAGAAGACAAAGTACTaGACAAGCTGTAGGTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VQDLRTDLEADTASIYRQKKTKY*TSCRFC Trigger: ACAAAACCTACAGCTTGTCCAGTACTTTGTCTTCTT...CTGTCTATAGATAGATGCAGTGTCTGCTTCTAAGTCAGTGCGTAGGTCCTGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR CCA 90 bp | ACAAATACCAAGCCTAAAGTTAGTAATCATGATGACACATCTATCTTGCACAACTCACTTAGGAAGAGGTaGAAGTGGTGGAGGGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TNTKPKVSNHDDTSILHNSLRKR*KWWRGF Trigger: GAACCCCCTCCACCACTTCCACCTCTTCCTAAGTGA...GTTGTGCAAGATAGATGTGTCATCATGATTACTAACTTTAGGCTTGGTATTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| 3UTR CAA 72 bp | GAGAGGACTCACACTGTCAATACATGTCTCTTCTTATaGTCAAAGCCAACTATCTCTCTAGTAGAATGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: ERTHTVNTCLFL*SKPTISLVECG Trigger: TCCGCATTCTACTAGAGAGATAGTTGGCTTTGACAATAAGAAGAGACATGTATTGACAGTGTGAGTCCTCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR TCA 90 bp | AAGAGAGGACTCACACTGTCAATACATGTCTCTTCTTATTGTCAAAGCCAACTATCTGAGAAATCATATTaGGGATTGTCTGCTCCGACG | + |
|
Preference number: 4 (lower is better) Translates to: KRGLTLSIHVSSYCQSQLSEKSY*GLSAPT Trigger: CGTCGGAGCAGACAATCCTCAATATGATTTCTCAGA...TAGTTGGCTTTGACAATAAGAAGAGACATGTATTGACAGTGTGAGTCCTCTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR GCA 90 bp | ACAAATACCAAGCCTAAAGTTAGTAATCATGATGACACATCTATCTTGCACAACCTTGTGTCTGAGCTATaGCCAGGCAACTGGGTCATT | + |
|
Preference number: 4 (lower is better) Translates to: TNTKPKVSNHDDTSILHNLVSEL*PGNWVI Trigger: AATGACCCAGTTGCCTGGGCATAGCTCAGACACAAG...GTTGTGCAAGATAGATGTGTCATCATGATTACTAACTTTAGGCTTGGTATTTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR CCA 90 bp | ATGAAGGTAGGAGACACACATGGCTTAGAAGCCATATTTATACAGAAACTGGACTTATCTCCTCTGGCTTaGAAGAAACTGCTTTATCCC | + |
|
Preference number: 4 (lower is better) Translates to: MKVGDTHGLEAIFIQKLDLSPLA*KKLLYP Trigger: GGGATAAAGCAGTTTCTTCCAAGCCAGAGGAGATAA...GTCCAGTTTCTGTATAAATATGGCTTCTAAGCCATGTGTGTCTCCTACCTTCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR CCA 90 bp | GATAATGGTCACTTCCATCCTATCATCATTCACCTAACAGCAGTAGAGATCCCACATCTTTATCTCCTCTaGCTTGGAAGAAACTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: DNGHFHPIIIHLTAVEIPHLYLL*LGRNCF Trigger: AAAGCAGTTTCTTCCAAGCCAGAGGAGATAAAGATG...TGGGATCTCTACTGCTGTTAGGTGAATGATGATAGGATGGAAGTGACCATTATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR GCA 90 bp | TGCAATGAACCAAATAACAGCAATGATCTGTGGCTAGGTAGCATTTTTCAGTCAGCCACCTTGATGACATaGTCCAATTTCTTTGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: CNEPNNSNDLWLGSIFQSATLMT*SNFFGC Trigger: ACAACCAAAGAAATTGGAGCATGTCATCAAGGTGGC...TGACTGAAAAATGCTACCTAGCCACAGATCATTGCTGTTATTTGGTTCATTGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR CCA 90 bp | ACAAATACCAAGCCTAAAGTTAGTAATCATGATGACACATCTATCTTGCACAACGCACTAAGCAGGGAGTaGAGCATATTCACAGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TNTKPKVSNHDDTSILHNALSRE*SIFTVS Trigger: AGACACTGTGAATATGCTCCACTCCCTGCTTAGTGC...GTTGTGCAAGATAGATGTGTCATCATGATTACTAACTTTAGGCTTGGTATTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR CCA 90 bp | TGCAATGAACCAAATAACAGCAATGATCTGTGGCTAGGTAGCATTTTTCAGTCAAGATGGCACCAGCTCTaGGATTCATATATTCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: CNEPNNSNDLWLGSIFQSRWHQL*DSYIHH Trigger: ATGGTGAATATATGAATCCCAGAGCTGGTGCCATCT...TGACTGAAAAATGCTACCTAGCCACAGATCATTGCTGTTATTTGGTTCATTGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR TCA 90 bp | GGACTCACACTGTCAATACATGTCTCTTCTTATTGTCAAAGCCAACTATCTCTCTTATCCAGTTTCATATaGGGAACTCGAGTTTTACAG | + |
|
Preference number: 4 (lower is better) Translates to: GLTLSIHVSSYCQSQLSLLSSFI*GTRVLQ Trigger: CTGTAAAACTCGAGTTCCTCATATGAAACTGGATAA...GAGAGATAGTTGGCTTTGACAATAAGAAGAGACATGTATTGACAGTGTGAGTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| 3UTR CAA 72 bp | TATGACACCAAATATGACAACCTTTGTGCTAAGGGATaGCATGTGATTAGAAAACACGTGACATTAATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: YDTKYDNLCAKG*HVIRKHVTLMR Trigger: TCTCATTAATGTCACGTGTTTTCTAATCACATGCAATCCCTTAGCACAAAGGTTGTCATATTTGGTGTCATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR CAA 90 bp | GGCTGTGAAAAGGGCAGGCCACTTGTGTCTGAGCTATGCCCAGGCAACTGGGTCTACCACCGCTTGTTGTaGTTCTTCCTCTCTCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GCEKGRPLVSELCPGNWVYHRLL*FFLSPS Trigger: GGAGGGAGAGAGGAAGAACAACAACAAGCGGTGGTA...GACCCAGTTGCCTGGGCATAGCTCAGACACAAGTGGCCTGCCCTTTTCACAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
||
| CDS-3UTR CAA 90 bp | TTGTCTGGCTGCTGTGTTTTGGATCACTTGGGCGTTTGCTCACGGGGCCGGCTGGTCTGTGCTAAGTCCTaGCTTGCTCGAACAAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LSGCCVLDHLGVCSRGRLVCAKS*LARTSW Trigger: CCAGCTTGTTCGAGCAAGCAAGGACTTAGCACAGAC...CAGCCGGCCCCGTGAGCAAACGCCCAAGTGATCCAAAACACAGCAGCCAGACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
||
| CDS-3UTR CAA 90 bp | CTTAACCCCCTGGCTTCTCCCAGTCCTAGTAGCACACATGGTCTGGTCTTTTCAGCAGATGGCACACTCTaGCTCGCCTGCTTCTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LNPLASPSPSSTHGLVFSADGTL*LACFWE Trigger: TTCCCAGAAGCAGGCGAGCAAGAGTGTGCCATCTGC...TGAAAAGACCAGACCATGTGTGCTACTAGGACTGGGAGAAGCCAGGGGGTTAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS GCA 90 bp | CAAGCCAGATGGATGCAGACACAGGCCACCACAGGAGGTGTGTACTaGAGGCTAAATGTGGTCAAATGCAGGCTGTTGGTTGCCATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: QARWMQTQATTGGVY*RLNVVKCRLLVAMK Trigger: CTTCATGGCAACCAACAGCCTGCATTTGACCACATTTAGCCTGCAGTACACACCTCCTGTGGTGGCCTGTGTCTGCATCCATCTGGCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000012104.7 ENSMUST00000169707.8 |
||
| CDS-3UTR CAA 90 bp | TGTTCTCCAGCTGCCTCTTCTGAGCAGCCAACTCTTCCGCGTGCTTTGCACGGTCAAGTGTGTGCCACCTaGATGACATGCTCCAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: CSPAASSEQPTLPRALHGQVCAT*MTCSNF Trigger: GAAATTGGAGCATGTCATCAAGGTGGCACACACTTG...ACCGTGCAAAGCACGCGGAAGAGTTGGCTGCTCAGAAGAGGCAGCTGGAGAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
||
| CDS-3UTR CAA 90 bp | TTCCAGTTCAGAACCCTAAATCACACCTACGTGAGTGAGGCTGCTGCACTGCTTAAAAGGGCAGGCCACTaGTGTCTGAGCTATGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: FQFRTLNHTYVSEAAALLKRAGH*CLSYAQ Trigger: CTGGGCATAGCTCAGACACAAGTGGCCTGCCCTTTT...AAGCAGTGCAGCAGCCTCACTCACGTAGGTGTGATTTAGGGTTCTGAACTGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR CAA 90 bp | TGTTCTCCAGCTGCCTCTTCTGAGCAGCCAACTCTTCCGCGTGCTTTGCACGGTGTAAAATACCACCGCTaGTTGTTGTTCTTCCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: CSPAASSEQPTLPRALHGVKYHR*LLFFLS Trigger: AGAGAGGAAGAACAACAACAAGCGGTGGTATTTTAC...ACCGTGCAAAGCACGCGGAAGAGTTGGCTGCTCAGAAGAGGCAGCTGGAGAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
||
| CDS-3UTR CAA 90 bp | TCCCTTCAGAGACCTGAGCTTTCTCGCAAAGCCCAACATGAAAAGACCCCATTCTTGTGCTCGCGGCTCTaGGTGACACTGTCTTCTATG | + |
|
Preference number: 5 (lower is better) Translates to: SLQRPELSRKAQHEKTPFLCSRL*VTLSSM Trigger: CATAGAAGACAGTGTCACCAAGAGCCGCGAGCACAA...GAATGGGGTCTTTTCATGTTGGGCTTTGCGAGAAAGCTCAGGTCTCTGAAGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR CAA 90 bp | TGTTCTCCAGCTGCCTCTTCTGAGCAGCCAACTCTTCCGCGTGCTTTGCACGGTCTCCAATTTCTTTGGTaGTTCTTCTACTTTTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CSPAASSEQPTLPRALHGLQFLW*FFYFCC Trigger: GCAGCAAAAGTAGAAGAACAACCAAAGAAATTGGAG...ACCGTGCAAAGCACGCGGAAGAGTTGGCTGCTCAGAAGAGGCAGCTGGAGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
||
| CDS-3UTR CAA 90 bp | CTTAACCCCCTGGCTTCTCCCAGTCCTAGTAGCACACATGGTCTGGTCTTTTCACAAGTGTGTGCCACCTaGATGACATGCTCCAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: LNPLASPSPSSTHGLVFSQVCAT*MTCSNF Trigger: GAAATTGGAGCATGTCATCAAGGTGGCACACACTTG...TGAAAAGACCAGACCATGTGTGCTACTAGGACTGGGAGAAGCCAGGGGGTTAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR CAA 90 bp | TCCCTTCAGAGACCTGAGCTTTCTCGCAAAGCCCAACATGAAAAGACCCCATTCACTGGAACCATCCTGTaGCAAGGAATGATCAACGCC | + |
|
Preference number: 5 (lower is better) Translates to: SLQRPELSRKAQHEKTPFTGTIL*QGMINA Trigger: GGCGTTGATCATTCCTTGCAACAGGATGGTTCCAGT...GAATGGGGTCTTTTCATGTTGGGCTTTGCGAGAAAGCTCAGGTCTCTGAAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
||
| CDS-3UTR CAA 90 bp | GATAATGGTCACTTCCATCCTATCATCATTCACCTAACAGCAGTAGAGATCCCAGGTGGTGGCCGAGGTTaGTCTGTAGTGCCAGATCTG | + |
|
Preference number: 5 (lower is better) Translates to: DNGHFHPIIIHLTAVEIPGGGRG*SVVPDL Trigger: CAGATCTGGCACTACAGACAAACCTCGGCCACCACC...TGGGATCTCTACTGCTGTTAGGTGAATGATGATAGGATGGAAGTGACCATTATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
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| CDS-3UTR CAA 90 bp | GAAAACACAAAAAGAAGTAACAGGGAAGTTTCCATACTGGCGCAGGAGTCAGGTTACCACCGCTTGTTGTaGTTCTTCCTCTCTCCCTCC | + |
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Preference number: 5 (lower is better) Translates to: ENTKRSNREVSILAQESGYHRLL*FFLSPS Trigger: GGAGGGAGAGAGGAAGAACAACAACAAGCGGTGGTA...ACCTGACTCCTGCGCCAGTATGGAAACTTCCCTGTTACTTCTTTTTGTGTTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
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| CDS-3UTR CAA 90 bp | ATGGCAGCCTGGTACGCCCTCCAATTCCGAATACGTTTCAGCCTGCTTGGAGTTTATACTATAGCAGTATaGATCGTCAGTTGTGAGACG | + |
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Preference number: 5 (lower is better) Translates to: MAAWYALQFRIRFSLLGVYTIAV*IVSCET Trigger: CGTCTCACAACTGACGATCAATACTGCTATAGTATA...AACTCCAAGCAGGCTGAAACGTATTCGGAATTGGAGGGCGTACCAGGCTGCCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
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| CDS-3UTR CAA 90 bp | AATCTGAATACAACAGTGTCTGTTGGCTGGGCTTGCTCATGCATTATACCAATGTGTGTTTTGGATCACTaGGGCGTTTGCTCACGGGGC | + |
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Preference number: 5 (lower is better) Translates to: NLNTTVSVGWACSCIIPMCVLDH*GVCSRG Trigger: GCCCCGTGAGCAAACGCCCAAGTGATCCAAAACACA...CATTGGTATAATGCATGAGCAAGCCCAGCCAACAGACACTGTTGTATTCAGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
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| CDS GCA 90 bp | AGTGACTCCTGTGGGTGCAGGCAAGTGTGTGCCACCTTGATGACATaGTCCAATTTCTTTGGTTGTTCTTCTACTTTTGCTGCTAGAAAC | + |
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Preference number: 5 (lower is better) Translates to: SDSCGCRQVCATLMT*SNFFGCSSTFAARN Trigger: GTTTCTAGCAGCAAAAGTAGAAGAACAACCAAAGAAATTGGAGCATGTCATCAAGGTGGCACACACTTGCCTGCACCCACAGGAGTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012104.7 ENSMUST00000168928.8 ENSMUST00000169707.8 |
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| CDS CCA 90 bp | GTAGAAATTCATGTGTCAATTCATCTAACAGTTCCAAGGTCACAGTaGCGTCAACATACTCCCACCAGTGCTTCCCGTCAGTTGAGACTG | + |
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Preference number: 5 (lower is better) Translates to: VEIHVSIHLTVPRSQ*RQHTPTSASRQLRL Trigger: CAGTCTCAACTGACGGGAAGCACTGGTGGGAGTATGTTGACGCCACTGTGACCTTGGAACTGTTAGATGAATTGACACATGAATTTCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000012104.7 ENSMUST00000169707.8 |
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| CDS-3UTR CAA 90 bp | CCTGGTACGCCCTCCAATTCCGAATACGTTTCAGCCTGCTTGGAGTTTTCTCTAGTTGTTCTTCTACTTTaGCTGCTAGAAACAAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: PGTPSNSEYVSACLEFSLVVLLL*LLETRL Trigger: CAGCCTTGTTTCTAGCAGCAAAAGTAGAAGAACAAC...TAGAGAAAACTCCAAGCAGGCTGAAACGTATTCGGAATTGGAGGGCGTACCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
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| CDS-3UTR CAA 90 bp | CGACATAATCCCACCTCTCTAATACCAGCACGAACTGTAGATGTGAGGCAGCAGGTTGTTCTTCTACTTTaGCTGCTAGAAACAAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: RHNPTSLIPARTVDVRQQVVLLL*LLETRL Trigger: CAGCCTTGTTTCTAGCAGCAAAAGTAGAAGAACAAC...CTGCTGCCTCACATCTACAGTTCGTGCTGGTATTAGAGAGGTGGGATTATGTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
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| CDS-3UTR CAA 90 bp | ACAGGACAAGCAAAGCATACCCTTCTTCCCTTCAGAGACCTGAGCTTTCTCGCACTCCAATTTCTTTGGTaGTTCTTCTACTTTTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: TGQAKHTLLPFRDLSFLALQFLW*FFYFCC Trigger: GCAGCAAAAGTAGAAGAACAACCAAAGAAATTGGAG...TGCGAGAAAGCTCAGGTCTCTGAAGGGAAGAAGGGTATGCTTTGCTTGTCCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
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| CDS GCA 90 bp | TCATGGCAGCCTGGTACGCCCTCCAATTCCGAATACGTTTCAGCCTaGTTGGAGTTTTCTCTAGAATCTGTAGAAATTCATGTGTCAATT | + |
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Preference number: 5 (lower is better) Translates to: SWQPGTPSNSEYVSA*LEFSLESVEIHVSI Trigger: AATTGACACATGAATTTCTACAGATTCTAGAGAAAACTCCAAGCAGGCTGAAACGTATTCGGAATTGGAGGGCGTACCAGGCTGCCATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000012104.7 ENSMUST00000169707.8 |
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| CDS-3UTR CAA 90 bp | GTTCAGGACCTACGCACTGACTTAGAAGCAGACACTGCATCTATCTATAGACAGGTAAAATACCACCGCTaGTTGTTGTTCTTCCTCTCT | + |
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Preference number: 5 (lower is better) Translates to: VQDLRTDLEADTASIYRQVKYHR*LLFFLS Trigger: AGAGAGGAAGAACAACAACAAGCGGTGGTATTTTAC...CTGTCTATAGATAGATGCAGTGTCTGCTTCTAAGTCAGTGCGTAGGTCCTGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
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| CDS-3UTR CAA 90 bp | AAGAGAGGACTCACACTGTCAATACATGTCTCTTCTTATTGTCAAAGCCAACTAGTCTGTGCTAAGTCCTaGCTTGCTCGAACAAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: KRGLTLSIHVSSYCQSQLVCAKS*LARTSW Trigger: CCAGCTTGTTCGAGCAAGCAAGGACTTAGCACAGAC...TAGTTGGCTTTGACAATAAGAAGAGACATGTATTGACAGTGTGAGTCCTCTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
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| CDS-3UTR CAA 90 bp | ACAAATACCAAGCCTAAAGTTAGTAATCATGATGACACATCTATCTTGCACAACCCTCGGTCATCTGGCTaGGTTTTCATGGCAGCCTGG | + |
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Preference number: 5 (lower is better) Translates to: TNTKPKVSNHDDTSILHNPRSSG*VFMAAW Trigger: CCAGGCTGCCATGAAAACCAAGCCAGATGACCGAGG...GTTGTGCAAGATAGATGTGTCATCATGATTACTAACTTTAGGCTTGGTATTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
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| CDS-3UTR CAA 90 bp | ATCATATTGAGGATTGTCTGCTCCGACGTGTTTTCATCTGCTCCTCGGTCATCTTATGTGGGTGATCAATaGTTAGTTCAAACCCTAAGG | + |
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Preference number: 5 (lower is better) Translates to: IILRIVCSDVFSSAPRSSYVGDQ*LVQTLR Trigger: CCTTAGGGTTTGAACTAACAATTGATCACCCACATA...AGATGACCGAGGAGCAGATGAAAACACGTCGGAGCAGACAATCCTCAATATGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168928.8 |
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| CDS-3UTR CAA 90 bp | GAAAACACAAAAAGAAGTAACAGGGAAGTTTCCATACTGGCGCAGGAGTCAGGTTATGTGGGTGATCAATaGTTAGTTCAAACCCTAAGG | + |
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Preference number: 5 (lower is better) Translates to: ENTKRSNREVSILAQESGYVGDQ*LVQTLR Trigger: CCTTAGGGTTTGAACTAACAATTGATCACCCACATA...ACCTGACTCCTGCGCCAGTATGGAAACTTCCCTGTTACTTCTTTTTGTGTTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
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| CDS-3UTR CAA 90 bp | GGACTCACACTGTCAATACATGTCTCTTCTTATTGTCAAAGCCAACTATCTCTCATTTTCAGAGCTGATTaGTCAGCCTTATCCAGAAAA | + |
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Preference number: 5 (lower is better) Translates to: GLTLSIHVSSYCQSQLSLIFRAD*SALSRK Trigger: TTTTCTGGATAAGGCTGACAAATCAGCTCTGAAAAT...GAGAGATAGTTGGCTTTGACAATAAGAAGAGACATGTATTGACAGTGTGAGTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
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| CDS-3UTR CAA 90 bp | TGCAATGAACCAAATAACAGCAATGATCTGTGGCTAGGTAGCATTTTTCAGTCATGTCTTGATAATCTATaGACTGAGTTGCGTTGTGAC | + |
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Preference number: 5 (lower is better) Translates to: CNEPNNSNDLWLGSIFQSCLDNL*TELRCD Trigger: GTCACAACGCAACTCAGTCAATAGATTATCAAGACA...TGACTGAAAAATGCTACCTAGCCACAGATCATTGCTGTTATTTGGTTCATTGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169707.8 |
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| CDS GCA 72 bp | GCCTCACTCCTCGTGTCAGGAAGTGACTCCTGTGGGTaGAGGCAAGTGTGTGCCACCTTGATGACATGCTCC | + |
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Preference number: 6 (lower is better) Translates to: ASLLVSGSDSCG*RQVCATLMTCS Trigger: GGAGCATGTCATCAAGGTGGCACACACTTGCCTGCACCCACAGGAGTCACTTCCTGACACGAGGAGTGAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012104.7 ENSMUST00000168928.8 ENSMUST00000169707.8 |
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| CDS GCA 72 bp | TGGATGCAGACACAGGCCACCACAGGAGGTGTGTACTaGAGGCTAAATGTGGTCAAATGCAGGCTGTTGGTT | + |
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Preference number: 6 (lower is better) Translates to: WMQTQATTGGVY*RLNVVKCRLLV Trigger: AACCAACAGCCTGCATTTGACCACATTTAGCCTGCAGTACACACCTCCTGTGGTGGCCTGTGTCTGCATCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000012104.7 ENSMUST00000169707.8 |
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| CDS CCA 72 bp | CATGTGTCAATTCATCTAACAGTTCCAAGGTCACAGTaGCGTCAACATACTCCCACCAGTGCTTCCCGTCAG | + |
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Preference number: 6 (lower is better) Translates to: HVSIHLTVPRSQ*RQHTPTSASRQ Trigger: CTGACGGGAAGCACTGGTGGGAGTATGTTGACGCCACTGTGACCTTGGAACTGTTAGATGAATTGACACATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000012104.7 ENSMUST00000169707.8 |
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| CDS TCA 72 bp | GTGCATGTATACTATAGCAGTATTGATCGTCAGTTGTaGGACGTTCAGACGTTGTCCCATGTCCTGGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: VHVYYSSIDRQL*DVQTLSHVLEE Trigger: CTCCTCCAGGACATGGGACAACGTCTGAACGTCTCACAACTGACGATCAATACTGCTATAGTATACATGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000012104.7 ENSMUST00000168928.8 ENSMUST00000169707.8 |
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| CDS CAA 90 bp | TGGCAGCCTGGTACGCCCTCCAATTCCGAATACGTTTCAGCCTGCTaGGAGTTTTCTCTAGAATCTGTAGAAATTCATGTGTCAATTCAT | + |
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Preference number: 6 (lower is better) Translates to: WQPGTPSNSEYVSAC*EFSLESVEIHVSIH Trigger: ATGAATTGACACATGAATTTCTACAGATTCTAGAGAAAACTCCAAGCAGGCTGAAACGTATTCGGAATTGGAGGGCGTACCAGGCTGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000012104.7 ENSMUST00000169707.8 |
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| CDS GCA 72 bp | CCTGGTACGCCCTCCAATTCCGAATACGTTTCAGCCTaGTTGGAGTTTTCTCTAGAATCTGTAGAAATTCAT | + |
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Preference number: 6 (lower is better) Translates to: PGTPSNSEYVSA*LEFSLESVEIH Trigger: ATGAATTTCTACAGATTCTAGAGAAAACTCCAAGCAGGCTGAAACGTATTCGGAATTGGAGGGCGTACCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000012104.7 ENSMUST00000169707.8 |
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| CDS CAA 72 bp | GGTACGCCCTCCAATTCCGAATACGTTTCAGCCTGCTaGGAGTTTTCTCTAGAATCTGTAGAAATTCATGTG | + |
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Preference number: 6 (lower is better) Translates to: GTPSNSEYVSAC*EFSLESVEIHV Trigger: CACATGAATTTCTACAGATTCTAGAGAAAACTCCAAGCAGGCTGAAACGTATTCGGAATTGGAGGGCGTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000012104.7 ENSMUST00000169707.8 |
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| CDS CAA 72 bp | GGGTGCACTTTACCACATGTGTATGTGGGTGATCAATaGTTAGTTCAAACCCTAAGGTCTGCAAAATTATAC | + |
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Preference number: 6 (lower is better) Translates to: GCTLPHVYVGDQ*LVQTLRSAKLY Trigger: GTATAATTTTGCAGACCTTAGGGTTTGAACTAACAATTGATCACCCACATACACATGTGGTAAAGTGCACCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000012104.7 ENSMUST00000168928.8 ENSMUST00000169707.8 |
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