Pregenerated sensors for CCNO (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042417Ensembl transcript IDs: ENSMUST00000038404.6
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCATTCTCCTTGGGCCACTGGCATGGGGGAGGGAACTCAGCCTCCTaGCTGGAGGGGGTTAAGATACGGACAAGCCACCTTGACTTGTCT | + |
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Preference number: 1 (lower is better) Translates to: SFSLGHWHGGGNSAS*LEGVKIRTSHLDLS Trigger: AGACAAGTCAAGGTGGCTTGTCCGTATCTTAACCCCCTCCAGTCAGGAGGCTGAGTTCCCTCCCCCATGCCAGTGGCCCAAGGAGAATGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| 3UTR CCA 90 bp | CTGTGTTGCACCAGGGACTGTCTCTTGCTTCACCCACTGCTAGTATaGCTGCCCGGTCCCCAAAGCTTCCCAGCTCCACATCAGTTAGTG | + |
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Preference number: 1 (lower is better) Translates to: LCCTRDCLLLHPLLV*LPGPQSFPAPHQLV Trigger: CACTAACTGATGTGGAGCTGGGAAGCTTTGGGGACCGGGCAGCCATACTAGCAGTGGGTGAAGCAAGAGACAGTCCCTGGTGCAACACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| 3UTR GCA 90 bp | CTACCTCGTGATGGACTTCGCCTGGGAAAAGCAGACAGTCAGGCATaGCAACAGCAGCATTTAGACAAGCCAGAACTGTCACCCCTGCCC | + |
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Preference number: 1 (lower is better) Translates to: LPRDGLRLGKADSQA*QQQHLDKPELSPLP Trigger: GGGCAGGGGTGACAGTTCTGGCTTGTCTAAATGCTGCTGTTGGCATGCCTGACTGTCTGCTTTTCCCAGGCGAAGTCCATCACGAGGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| 3UTR TCA 90 bp | TACTGCCGTACCAGAATTACCCTGGGCTCATGCTGCAGTATAAACTaGACCATGAGTGTAGCTGCAGAGGAAATGACCCAGGTTGCAACA | + |
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Preference number: 1 (lower is better) Translates to: YCRTRITLGSCCSIN*TMSVAAEEMTQVAT Trigger: TGTTGCAACCTGGGTCATTTCCTCTGCAGCTACACTCATGGTTCAGTTTATACTGCAGCATGAGCCCAGGGTAATTCTGGTACGGCAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| 3UTR CCA 90 bp | ATCTTGCCAGGTTGTTTTCACAGAGCTAACTACAAAGTAAAACTGTaGGAGCAGGGAAGAGCCTCCGGAATTGGCTACCTCGTGATGGAC | + |
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Preference number: 1 (lower is better) Translates to: ILPGCFHRANYKVKL*EQGRASGIGYLVMD Trigger: GTCCATCACGAGGTAGCCAATTCCGGAGGCTCTTCCCTGCTCCCACAGTTTTACTTTGTAGTTAGCTCTGTGAAAACAACCTGGCAAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| 3UTR GCA 90 bp | AACAGCTATAACAATACGCAAAAGGCATTCCAGCATTTCCTGTGTTaGACCAGGGACTGTCTCTTGCTTCACCCACTGCTAGTATGGCTG | + |
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Preference number: 1 (lower is better) Translates to: NSYNNTQKAFQHFLC*TRDCLLLHPLLVWL Trigger: CAGCCATACTAGCAGTGGGTGAAGCAAGAGACAGTCCCTGGTGCAACACAGGAAATGCTGGAATGCCTTTTGCGTATTGTTATAGCTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| 3UTR GCA 90 bp | TACCCTGGGCTCATGCTGCAGTATAAACTGAACCATGAGTGTAGCTaGAGAGGAAATGACCCAGGTTGCAACAGCTATAACAATACGCAA | + |
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Preference number: 1 (lower is better) Translates to: YPGLMLQYKLNHECS*RGNDPGCNSYNNTQ Trigger: TTGCGTATTGTTATAGCTGTTGCAACCTGGGTCATTTCCTCTGCAGCTACACTCATGGTTCAGTTTATACTGCAGCATGAGCCCAGGGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| 3UTR-3UTR CCA 90 bp | AACCCTGTCTCATTCTCCTTGGGCCACTGGCATGGGGGAGGGAACTCAGCCTCCTACAAAGTAAAACTGTaGGAGCAGGGAAGAGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: NPVSFSLGHWHGGGNSASYKVKL*EQGRAS Trigger: GGAGGCTCTTCCCTGCTCCCACAGTTTTACTTTGTA...GGAGGCTGAGTTCCCTCCCCCATGCCAGTGGCCCAAGGAGAATGAGACAGGGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| 3UTR CAA 90 bp | ACTCAGCCTCCTGACTGGAGGGGGTTAAGATACGGACAAGCCACCTaGACTTGTCTGCTTTCTGGAACAGTGGCATATAAAATCTTGCCA | + |
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Preference number: 2 (lower is better) Translates to: TQPPDWRGLRYGQAT*TCLLSGTVAYKILP Trigger: TGGCAAGATTTTATATGCCACTGTTCCAGAAAGCAGACAAGTCAAGGTGGCTTGTCCGTATCTTAACCCCCTCCAGTCAGGAGGCTGAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| 3UTR-3UTR GCA 90 bp | ACAGCTATAACAATACGCAAAAGGCATTCCAGCATTTCCTGTGTTGCACCAGGGCAGAACTGTCACCCCTaGCCTTGTGTACTACAAAAT | + |
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Preference number: 2 (lower is better) Translates to: TAITIRKRHSSISCVAPGQNCHP*PCVLQN Trigger: ATTTTGTAGTACACAAGGGCAGGGGTGACAGTTCTG...CCCTGGTGCAACACAGGAAATGCTGGAATGCCTTTTGCGTATTGTTATAGCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| 3UTR-3UTR GCA 90 bp | ACAGCTATAACAATACGCAAAAGGCATTCCAGCATTTCCTGTGTTGCACCAGGGTGGCATATAAAATCTTaGCAGGTTGTTTTCACAGAG | + |
|
Preference number: 2 (lower is better) Translates to: TAITIRKRHSSISCVAPGWHIKS*QVVFTE Trigger: CTCTGTGAAAACAACCTGGCAAGATTTTATATGCCA...CCCTGGTGCAACACAGGAAATGCTGGAATGCCTTTTGCGTATTGTTATAGCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| 3UTR-3UTR CAA 90 bp | AACCCTGTCTCATTCTCCTTGGGCCACTGGCATGGGGGAGGGAACTCAGCCTCCACAAGCCACCTTGACTaGTCTGCTTTCTGGAACAGT | + |
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Preference number: 3 (lower is better) Translates to: NPVSFSLGHWHGGGNSASTSHLD*SAFWNS Trigger: ACTGTTCCAGAAAGCAGACAAGTCAAGGTGGCTTGT...GGAGGCTGAGTTCCCTCCCCCATGCCAGTGGCCCAAGGAGAATGAGACAGGGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| 3UTR GCA 72 bp | GATGGACTTCGCCTGGGAAAAGCAGACAGTCAGGCATaGCAACAGCAGCATTTAGACAAGCCAGAACTGTCA | + |
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Preference number: 3 (lower is better) Translates to: DGLRLGKADSQA*QQQHLDKPELS Trigger: TGACAGTTCTGGCTTGTCTAAATGCTGCTGTTGGCATGCCTGACTGTCTGCTTTTCCCAGGCGAAGTCCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| 3UTR GCA 72 bp | AACAATACGCAAAAGGCATTCCAGCATTTCCTGTGTTaGACCAGGGACTGTCTCTTGCTTCACCCACTGCTA | + |
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Preference number: 3 (lower is better) Translates to: NNTQKAFQHFLC*TRDCLLLHPLL Trigger: TAGCAGTGGGTGAAGCAAGAGACAGTCCCTGGTGCAACACAGGAAATGCTGGAATGCCTTTTGCGTATTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| 3UTR CCA 72 bp | GGTTGTTTTCACAGAGCTAACTACAAAGTAAAACTGTaGGAGCAGGGAAGAGCCTCCGGAATTGGCTACCTC | + |
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Preference number: 3 (lower is better) Translates to: GCFHRANYKVKL*EQGRASGIGYL Trigger: GAGGTAGCCAATTCCGGAGGCTCTTCCCTGCTCCCACAGTTTTACTTTGTAGTTAGCTCTGTGAAAACAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| 3UTR GCA 72 bp | AACCATGAGTGTAGCTGCAGAGGAAATGACCCAGGTTaGAACAGCTATAACAATACGCAAAAGGCATTCCAG | + |
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Preference number: 3 (lower is better) Translates to: NHECSCRGNDPG*NSYNNTQKAFQ Trigger: CTGGAATGCCTTTTGCGTATTGTTATAGCTGTTGCAACCTGGGTCATTTCCTCTGCAGCTACACTCATGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| 3UTR GCA 72 bp | CTCATGCTGCAGTATAAACTGAACCATGAGTGTAGCTaGAGAGGAAATGACCCAGGTTGCAACAGCTATAAC | + |
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Preference number: 3 (lower is better) Translates to: LMLQYKLNHECS*RGNDPGCNSYN Trigger: GTTATAGCTGTTGCAACCTGGGTCATTTCCTCTGCAGCTACACTCATGGTTCAGTTTATACTGCAGCATGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS-3UTR TCA 90 bp | TCTCCTTGGGCCACTGGCATGGGGGAGGGAACTCAGCCTCCTGACTGGAGGGGGGCTCCAGGAAGAAGTTaGTGGTGGGCGCGCCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: SPWATGMGEGTQPPDWRGAPGRS*WWARPG Trigger: GCCTGGGCGCGCCCACCATCAACTTCTTCCTGGAGC...CCCCCTCCAGTCAGGAGGCTGAGTTCCCTCCCCCATGCCAGTGGCCCAAGGAGA 67% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS-3UTR GCA 90 bp | TCTCCTTGGGCCACTGGCATGGGGGAGGGAACTCAGCCTCCTGACTGGAGGGGGTCCAGGTTGCACAGCTaGTGCCGGGAGAACGCACCG | + |
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Preference number: 4 (lower is better) Translates to: SPWATGMGEGTQPPDWRGSRLHS*CRENAP Trigger: CGGTGCGTTCTCCCGGCAGCAGCTGTGCAACCTGGA...CCCCCTCCAGTCAGGAGGCTGAGTTCCCTCCCCCATGCCAGTGGCCCAAGGAGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS-3UTR CCA 90 bp | TCTCCTTGGGCCACTGGCATGGGGGAGGGAACTCAGCCTCCTGACTGGAGGGGGAGCGACTCCCGCGGGTaGAAAAGATTCTCCTGCGCC | + |
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Preference number: 4 (lower is better) Translates to: SPWATGMGEGTQPPDWRGSDSRG*KRFSCA Trigger: GGCGCAGGAGAATCTTTTCCACCCGCGGGAGTCGCT...CCCCCTCCAGTCAGGAGGCTGAGTTCCCTCCCCCATGCCAGTGGCCCAAGGAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS-3UTR CCA 90 bp | TCTCCTTGGGCCACTGGCATGGGGGAGGGAACTCAGCCTCCTGACTGGAGGGGGGTGACCCCGAGCAGCTaGAAGCAGTCTGCAGCAACA | + |
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Preference number: 4 (lower is better) Translates to: SPWATGMGEGTQPPDWRGVTPSS*KQSAAT Trigger: TGTTGCTGCAGACTGCTTCCAGCTGCTCGGGGTCAC...CCCCCTCCAGTCAGGAGGCTGAGTTCCCTCCCCCATGCCAGTGGCCCAAGGAGA 63% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS-3UTR CCA 90 bp | GGAACTCAGCCTCCTGACTGGAGGGGGTTAAGATACGGACAAGCCACCTTGACTCGGCGCCGTCCGAGCTaGAGCTGGGGGACTCGAAAA | + |
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Preference number: 4 (lower is better) Translates to: GTQPPDWRGLRYGQATLTRRRPS*SWGTRK Trigger: TTTTCGAGTCCCCCAGCTCCAGCTCGGACGGCGCCG...AGTCAAGGTGGCTTGTCCGTATCTTAACCCCCTCCAGTCAGGAGGCTGAGTTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS-3UTR CCA 90 bp | CTACCTCGTGATGGACTTCGCCTGGGAAAAGCAGACAGTCAGGCATGCCAACAGTCGGTGACCTCAGCCTaGCCGGCTTCCATGCGCCAC | + |
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Preference number: 4 (lower is better) Translates to: LPRDGLRLGKADSQACQQSVTSA*PASMRH Trigger: GTGGCGCATGGAAGCCGGCCAGGCTGAGGTCACCGA...CTGTTGGCATGCCTGACTGTCTGCTTTTCCCAGGCGAAGTCCATCACGAGGTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS-3UTR CCA 90 bp | GGCTACCTCGTGATGGACTTCGCCTGGGAAAAGCAGACAGTCAGGCATGCCAACCGTCCGAGCTGGAGCTaGGGGACTCGAAAAGGTCAC | + |
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Preference number: 4 (lower is better) Translates to: GYLVMDFAWEKQTVRHANRPSWS*GTRKGH Trigger: GTGACCTTTTCGAGTCCCCCAGCTCCAGCTCGGACG...GTTGGCATGCCTGACTGTCTGCTTTTCCCAGGCGAAGTCCATCACGAGGTAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS-3UTR GCA 90 bp | GGAACTCAGCCTCCTGACTGGAGGGGGTTAAGATACGGACAAGCCACCTTGACTTTGCCCAGACAGTCTTaGAGTGTGGCCTCTGGGTGC | + |
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Preference number: 4 (lower is better) Translates to: GTQPPDWRGLRYGQATLTLPRQS*SVASGC Trigger: GCACCCAGAGGCCACACTGCAAGACTGTCTGGGCAA...AGTCAAGGTGGCTTGTCCGTATCTTAACCCCCTCCAGTCAGGAGGCTGAGTTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS-3UTR CCA 90 bp | GGAACTCAGCCTCCTGACTGGAGGGGGTTAAGATACGGACAAGCCACCTTGACTGACAGTCTTGCAGTGTaGCCTCTGGGTGCTCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: GTQPPDWRGLRYGQATLTDSLAV*PLGALP Trigger: TGGGAGAGCACCCAGAGGCCACACTGCAAGACTGTC...AGTCAAGGTGGCTTGTCCGTATCTTAACCCCCTCCAGTCAGGAGGCTGAGTTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| 3UTR CAA 72 bp | TTCCAGCATTTCCTGTGTTGCACCAGGGACTGTCTCTaGCTTCACCCACTGCTAGTATGGCTGCCCGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: FQHFLCCTRDCL*LHPLLVWLPGP Trigger: GGGACCGGGCAGCCATACTAGCAGTGGGTGAAGCAAGAGACAGTCCCTGGTGCAACACAGGAAATGCTGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS-3UTR CCA 90 bp | TCTGTACTGCATATTCTCCTTAAGGCACGGAGCAGGGACCAGGGAATTTTAAAAGCAGTCACTTGTGGCTaGCGCGCCAGCGACTCCCGC | + |
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Preference number: 4 (lower is better) Translates to: SVLHILLKARSRDQGILKAVTCG*RASDSR Trigger: GCGGGAGTCGCTGGCGCGCCAGCCACAAGTGACTGC...TTTTAAAATTCCCTGGTCCCTGCTCCGTGCCTTAAGGAGAATATGCAGTACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS-3UTR CCA 90 bp | CACAGAGCTAACTACAAAGTAAAACTGTGGGAGCAGGGAAGAGCCTCCGGAATTTTCGGCAGTCACTTGTaGCTGGCGCGCCAGCGACTC | + |
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Preference number: 4 (lower is better) Translates to: HRANYKVKLWEQGRASGIFGSHL*LARQRL Trigger: GAGTCGCTGGCGCGCCAGCCACAAGTGACTGCCGAA...AATTCCGGAGGCTCTTCCCTGCTCCCACAGTTTTACTTTGTAGTTAGCTCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS-3UTR TCA 90 bp | AGATACGGACAAGCCACCTTGACTTGTCTGCTTTCTGGAACAGTGGCATATAAAAGGGCTGGGCAGGGTTaGGTAGGGAGCTGCAGTCCC | + |
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Preference number: 4 (lower is better) Translates to: RYGQATLTCLLSGTVAYKRAGQG*VGSCSP Trigger: GGGACTGCAGCTCCCTACTCAACCCTGCCCAGCCCT...TTTATATGCCACTGTTCCAGAAAGCAGACAAGTCAAGGTGGCTTGTCCGTATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS-3UTR GCA 90 bp | AAAGCAGACAGTCAGGCATGCCAACAGCAGCATTTAGACAAGCCAGAACTGTCAAACTGGCGGTGGACTTaGAGGAGCCAGCTGAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: KADSQACQQQHLDKPELSNWRWT*RSQLSS Trigger: ACTGCTCAGCTGGCTCCTGCAAGTCCACCGCCAGTT...TGACAGTTCTGGCTTGTCTAAATGCTGCTGTTGGCATGCCTGACTGTCTGCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS-3UTR CCA 90 bp | AAAGCAGACAGTCAGGCATGCCAACAGCAGCATTTAGACAAGCCAGAACTGTCAGCGCCCAGGCTGAAGTaGAGCTTATGCAGCACGATG | + |
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Preference number: 4 (lower is better) Translates to: KADSQACQQQHLDKPELSAPRLK*SLCSTM Trigger: CATCGTGCTGCATAAGCTCCACTTCAGCCTGGGCGC...TGACAGTTCTGGCTTGTCTAAATGCTGCTGTTGGCATGCCTGACTGTCTGCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS-3UTR CCA 90 bp | AGATACGGACAAGCCACCTTGACTTGTCTGCTTTCTGGAACAGTGGCATATAAAAGCGCTGTCAAGGGCTaGGCAGGGTTGAGTAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: RYGQATLTCLLSGTVAYKSAVKG*AGLSRE Trigger: CTCCCTACTCAACCCTGCCCAGCCCTTGACAGCGCT...TTTATATGCCACTGTTCCAGAAAGCAGACAAGTCAAGGTGGCTTGTCCGTATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS-3UTR GCA 90 bp | AAAGCAGACAGTCAGGCATGCCAACAGCAGCATTTAGACAAGCCAGAACTGTCAGCTTATGCAGCACGATaGACTCCAGGTTGCACAGCT | + |
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Preference number: 4 (lower is better) Translates to: KADSQACQQQHLDKPELSAYAAR*TPGCTA Trigger: AGCTGTGCAACCTGGAGTGCATCGTGCTGCATAAGC...TGACAGTTCTGGCTTGTCTAAATGCTGCTGTTGGCATGCCTGACTGTCTGCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS-3UTR GCA 90 bp | CACAGAGCTAACTACAAAGTAAAACTGTGGGAGCAGGGAAGAGCCTCCGGAATTCTGAAGTGGAGCTTATaGAGCACGATGCACTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: HRANYKVKLWEQGRASGILKWSL*STMHSR Trigger: CCTGGAGTGCATCGTGCTGCATAAGCTCCACTTCAG...AATTCCGGAGGCTCTTCCCTGCTCCCACAGTTTTACTTTGTAGTTAGCTCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS-3UTR GCA 90 bp | AGATACGGACAAGCCACCTTGACTTGTCTGCTTTCTGGAACAGTGGCATATAAAATCTCGTGCTGGTGCTaGAGCAATCCGTCAGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: RYGQATLTCLLSGTVAYKISCWC*SNPSAS Trigger: GCTGGCTGACGGATTGCTGCAGCACCAGCACGAGAT...TTTATATGCCACTGTTCCAGAAAGCAGACAAGTCAAGGTGGCTTGTCCGTATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS-3UTR CCA 90 bp | AGATACGGACAAGCCACCTTGACTTGTCTGCTTTCTGGAACAGTGGCATATAAATCTGCTCTTCTTCACTaGGGCGCGGAGGTTCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: RYGQATLTCLLSGTVAYKSALLH*GAEVLV Trigger: CACCAGAACCTCCGCGCCCCAGTGAAGAAGAGCAGA...TTTATATGCCACTGTTCCAGAAAGCAGACAAGTCAAGGTGGCTTGTCCGTATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS-3UTR CCA 90 bp | AAAGCAGACAGTCAGGCATGCCAACAGCAGCATTTAGACAAGCCAGAACTGTCACTGTTTCAAGCGAGGTaGGTGCACCTCTACCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: KADSQACQQQHLDKPELSLFQAR*VHLYLL Trigger: AAGCAGGTAGAGGTGCACCCACCTCGCTTGAAACAG...TGACAGTTCTGGCTTGTCTAAATGCTGCTGTTGGCATGCCTGACTGTCTGCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| 3UTR CAA 72 bp | CCTGACTGGAGGGGGTTAAGATACGGACAAGCCACCTaGACTTGTCTGCTTTCTGGAACAGTGGCATATAAA | + |
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Preference number: 4 (lower is better) Translates to: PDWRGLRYGQAT*TCLLSGTVAYK Trigger: TTTATATGCCACTGTTCCAGAAAGCAGACAAGTCAAGGTGGCTTGTCCGTATCTTAACCCCCTCCAGTCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS-3UTR GCA 90 bp | TTTAGACAAGCCAGAACTGTCACCCCTGCCCTTGTGTACTACAAAATAAATAAACGATGCACTCCAGGTTaGACAGCTGCTGCCGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: FRQARTVTPALVYYKINKRCTPG*TAAAGR Trigger: TCTCCCGGCAGCAGCTGTGCAACCTGGAGTGCATCG...TTTATTTATTTTGTAGTACACAAGGGCAGGGGTGACAGTTCTGGCTTGTCTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| 3UTR CAA 72 bp | GTACAGTATTTACAGGTAGGAGACCTCAACTTCTCTTaGGATCTGTACTGCATATTCTCCTTAAGGCACGGA | + |
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Preference number: 4 (lower is better) Translates to: VQYLQVGDLNFS*DLYCIFSLRHG Trigger: TCCGTGCCTTAAGGAGAATATGCAGTACAGATCCAAAGAGAAGTTGAGGTCTCCTACCTGTAAATACTGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS CCA 90 bp | CGGAGGCACGGGCGTCTGCTCTTCTTCACTGGGGCGCGGAGGTTCTaGTGGCTGTCTCGCCTCCCGGCTCCCGCGGCGGGGCTGCCCGGG | + |
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Preference number: 5 (lower is better) Translates to: RRHGRLLFFTGARRF*WLSRLPAPAAGLPG Trigger: CCCGGGCAGCCCCGCCGCGGGAGCCGGGAGGCGAGACAGCCACCAGAACCTCCGCGCCCCAGTGAAGAAGAGCAGACGCCCGTGCCTCCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS CCA 90 bp | CAGCGGCTTCTTTCTCCGGAGGCACGGGCGTCTGCTCTTCTTCACTaGGGCGCGGAGGTTCTGGTGGCTGTCTCGCCTCCCGGCTCCCGC | + |
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Preference number: 5 (lower is better) Translates to: QRLLSPEARASALLH*GAEVLVAVSPPGSR Trigger: GCGGGAGCCGGGAGGCGAGACAGCCACCAGAACCTCCGCGCCCCAGTGAAGAAGAGCAGACGCCCGTGCCTCCGGAGAAAGAAGCCGCTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS TCA 90 bp | CTCGGAAGGTCTGGAGATCCAGCGCTGTCAAGGGCTGGGCAGGGTTaGGTAGGGAGCTGCAGTCCCGCGCCGCAGACACTGCGGGGCTGT | + |
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Preference number: 5 (lower is better) Translates to: LGRSGDPALSRAGQG*VGSCSPAPQTLRGC Trigger: ACAGCCCCGCAGTGTCTGCGGCGCGGGACTGCAGCTCCCTACTCAACCCTGCCCAGCCCTTGACAGCGCTGGATCTCCAGACCTTCCGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS-3UTR CAA 90 bp | TCTCCTTGGGCCACTGGCATGGGGGAGGGAACTCAGCCTCCTGACTGGAGGGGGGAACTGGCGGTGGACTaGCAGGAGCCAGCTGAGCAG | + |
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Preference number: 5 (lower is better) Translates to: SPWATGMGEGTQPPDWRGELAVD*QEPAEQ Trigger: CTGCTCAGCTGGCTCCTGCAAGTCCACCGCCAGTTC...CCCCCTCCAGTCAGGAGGCTGAGTTCCCTCCCCCATGCCAGTGGCCCAAGGAGA 66% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS GCA 90 bp | AACGCACCGCCGCACAGGGCCAGGAGCTGTTTCAAGCGAGGTGGGTaGACCTCTACCTGCTTGCAAGCGATGAGCAGACAGGTGACCCCG | + |
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Preference number: 5 (lower is better) Translates to: NAPPHRARSCFKRGG*TSTCLQAMSRQVTP Trigger: CGGGGTCACCTGTCTGCTCATCGCTTGCAAGCAGGTAGAGGTGCACCCACCTCGCTTGAAACAGCTCCTGGCCCTGTGCGGCGGTGCGTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS TCA 90 bp | TCTAGAGCTTCGGTGACCTCAGCCTGGCCGGCTTCCATGCGCCACTaGGTGAAGTGCTCCAGGAAGAAGTTGATGGTGGGCGCGCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: SRASVTSAWPASMRH*VKCSRKKLMVGAPR Trigger: CCTGGGCGCGCCCACCATCAACTTCTTCCTGGAGCACTTCACTCAGTGGCGCATGGAAGCCGGCCAGGCTGAGGTCACCGAAGCTCTAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS GCA 90 bp | AGCGTCTGCAGCTTGCCCAGACAGTCTTGCAGTGTGGCCTCTGGGTaGTCTCCCAGGCGCAGGTCCATCTCGTGCTGGTGCTGCAGCAAT | + |
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Preference number: 5 (lower is better) Translates to: SVCSLPRQSCSVASG*SPRRRSISCWCCSN Trigger: ATTGCTGCAGCACCAGCACGAGATGGACCTGCGCCTGGGAGAGCACCCAGAGGCCACACTGCAAGACTGTCTGGGCAAGCTGCAGACGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS CCA 90 bp | GGAGAACGCACCGCCGCACAGGGCCAGGAGCTGTTTCAAGCGAGGTaGGTGCACCTCTACCTGCTTGCAAGCGATGAGCAGACAGGTGAC | + |
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Preference number: 5 (lower is better) Translates to: GERTAAQGQELFQAR*VHLYLLASDEQTGD Trigger: GTCACCTGTCTGCTCATCGCTTGCAAGCAGGTAGAGGTGCACCCACCTCGCTTGAAACAGCTCCTGGCCCTGTGCGGCGGTGCGTTCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS-3UTR CAA 90 bp | AACCCTGTCTCATTCTCCTTGGGCCACTGGCATGGGGGAGGGAACTCAGCCTCCACGATGCACTCCAGGTaGCACAGCTGCTGCCGGGAG | + |
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Preference number: 5 (lower is better) Translates to: NPVSFSLGHWHGGGNSASTMHSR*HSCCRE Trigger: CTCCCGGCAGCAGCTGTGCAACCTGGAGTGCATCGT...GGAGGCTGAGTTCCCTCCCCCATGCCAGTGGCCCAAGGAGAATGAGACAGGGTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS TCA 90 bp | ACTCGAAAGAGAGGCCGAACTGGCGGTGGACTTGCAGGAGCCAGCTaGGCAGTTTACAGCGCGATTCGGCAGTCACTTGTGGCTGGCGCG | + |
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Preference number: 5 (lower is better) Translates to: TRKRGRTGGGLAGAS*AVYSAIRQSLVAGA Trigger: CGCGCCAGCCACAAGTGACTGCCGAATCGCGCTGTAAACTGCTCAGCTGGCTCCTGCAAGTCCACCGCCAGTTCGGCCTCTCTTTCGAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS GCA 90 bp | CTGCTATTGATGGACACTAGCGTCTGCAGCTTGCCCAGACAGTCTTaGAGTGTGGCCTCTGGGTGCTCTCCCAGGCGCAGGTCCATCTCG | + |
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Preference number: 5 (lower is better) Translates to: LLLMDTSVCSLPRQS*SVASGCSPRRRSIS Trigger: CGAGATGGACCTGCGCCTGGGAGAGCACCCAGAGGCCACACTGCAAGACTGTCTGGGCAAGCTGCAGACGCTAGTGTCCATCAATAGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS-3UTR CAA 90 bp | AACCCTGTCTCATTCTCCTTGGGCCACTGGCATGGGGGAGGGAACTCAGCCTCCGGCAGGGAGCTGCTATaGATGGACACTAGCGTCTGC | + |
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Preference number: 5 (lower is better) Translates to: NPVSFSLGHWHGGGNSASGRELL*MDTSVC Trigger: GCAGACGCTAGTGTCCATCAATAGCAGCTCCCTGCC...GGAGGCTGAGTTCCCTCCCCCATGCCAGTGGCCCAAGGAGAATGAGACAGGGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS GCA 90 bp | GGCAGAATGCGAGGCAGGGAGCTGCTATTGATGGACACTAGCGTCTaGAGCTTGCCCAGACAGTCTTGCAGTGTGGCCTCTGGGTGCTCT | + |
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Preference number: 5 (lower is better) Translates to: GRMRGRELLLMDTSV*SLPRQSCSVASGCS Trigger: AGAGCACCCAGAGGCCACACTGCAAGACTGTCTGGGCAAGCTGCAGACGCTAGTGTCCATCAATAGCAGCTCCCTGCCTCGCATTCTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS CCA 90 bp | TTCACGGTCAGACACAGCGACTCGAAAGAGAGGCCGAACTGGCGGTaGACTTGCAGGAGCCAGCTGAGCAGTTTACAGCGCGATTCGGCA | + |
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Preference number: 5 (lower is better) Translates to: FTVRHSDSKERPNWR*TCRSQLSSLQRDSA Trigger: TGCCGAATCGCGCTGTAAACTGCTCAGCTGGCTCCTGCAAGTCCACCGCCAGTTCGGCCTCTCTTTCGAGTCGCTGTGTCTGACCGTGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS-3UTR CAA 90 bp | CACAGAGCTAACTACAAAGTAAAACTGTGGGAGCAGGGAAGAGCCTCCGGAATTTGCTCCAGGAAGAAGTaGATGGTGGGCGCGCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: HRANYKVKLWEQGRASGICSRKK*MVGAPR Trigger: CCTGGGCGCGCCCACCATCAACTTCTTCCTGGAGCA...AATTCCGGAGGCTCTTCCCTGCTCCCACAGTTTTACTTTGTAGTTAGCTCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS-3UTR CAA 90 bp | ACAGCTATAACAATACGCAAAAGGCATTCCAGCATTTCCTGTGTTGCACCAGGGCTTGCCCAGACAGTCTaGCAGTGTGGCCTCTGGGTG | + |
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Preference number: 5 (lower is better) Translates to: TAITIRKRHSSISCVAPGLAQTV*QCGLWV Trigger: CACCCAGAGGCCACACTGCAAGACTGTCTGGGCAAG...CCCTGGTGCAACACAGGAAATGCTGGAATGCCTTTTGCGTATTGTTATAGCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS CCA 72 bp | GGGCGTCTGCTCTTCTTCACTGGGGCGCGGAGGTTCTaGTGGCTGTCTCGCCTCCCGGCTCCCGCGGCGGGG | + |
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Preference number: 6 (lower is better) Translates to: GRLLFFTGARRF*WLSRLPAPAAG Trigger: CCCCGCCGCGGGAGCCGGGAGGCGAGACAGCCACCAGAACCTCCGCGCCCCAGTGAAGAAGAGCAGACGCCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS GCA 72 bp | GGGTGCTCTCCCAGGCGCAGGTCCATCTCGTGCTGGTaGTGCAGCAATCCGTCAGCCAGCGCCAGGCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: GCSPRRRSISCW*CSNPSASARQQ Trigger: CTGCTGCCTGGCGCTGGCTGACGGATTGCTGCAGCACCAGCACGAGATGGACCTGCGCCTGGGAGAGCACCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS GCA 72 bp | GCCTCTGGGTGCTCTCCCAGGCGCAGGTCCATCTCGTaGTGGTGCTGCAGCAATCCGTCAGCCAGCGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: ASGCSPRRRSIS*WCCSNPSASAR Trigger: CCTGGCGCTGGCTGACGGATTGCTGCAGCACCAGCACGAGATGGACCTGCGCCTGGGAGAGCACCCAGAGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS CAA 90 bp | GCGCCCAGGCTGAAGTGGAGCTTATGCAGCACGATGCACTCCAGGTaGCACAGCTGCTGCCGGGAGAACGCACCGCCGCACAGGGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: APRLKWSLCSTMHSR*HSCCRENAPPHRAR Trigger: CCTGGCCCTGTGCGGCGGTGCGTTCTCCCGGCAGCAGCTGTGCAACCTGGAGTGCATCGTGCTGCATAAGCTCCACTTCAGCCTGGGCGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS TCA 72 bp | GTTAGGCTCAGCTCCGCCACTCCCCGGGCCAGGGTTTaGGCCTCTAGAGCTTCGGTGACCTCAGCCTGGCCG | + |
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Preference number: 6 (lower is better) Translates to: VRLSSATPRARV*ASRASVTSAWP Trigger: CGGCCAGGCTGAGGTCACCGAAGCTCTAGAGGCTCAAACCCTGGCCCGGGGAGTGGCGGAGCTGAGCCTAAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS CCA 72 bp | CTTTCTCCGGAGGCACGGGCGTCTGCTCTTCTTCACTaGGGCGCGGAGGTTCTGGTGGCTGTCTCGCCTCCC | + |
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Preference number: 6 (lower is better) Translates to: LSPEARASALLH*GAEVLVAVSPP Trigger: GGGAGGCGAGACAGCCACCAGAACCTCCGCGCCCCAGTGAAGAAGAGCAGACGCCCGTGCCTCCGGAGAAAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS CCA 72 bp | TCTGGGTGCTCTCCCAGGCGCAGGTCCATCTCGTGCTaGTGCTGCAGCAATCCGTCAGCCAGCGCCAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: SGCSPRRRSISC*CCSNPSASARQ Trigger: CTGCCTGGCGCTGGCTGACGGATTGCTGCAGCACCAGCACGAGATGGACCTGCGCCTGGGAGAGCACCCAGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS TCA 72 bp | TCTGGAGATCCAGCGCTGTCAAGGGCTGGGCAGGGTTaGGTAGGGAGCTGCAGTCCCGCGCCGCAGACACTG | + |
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Preference number: 6 (lower is better) Translates to: SGDPALSRAGQG*VGSCSPAPQTL Trigger: CAGTGTCTGCGGCGCGGGACTGCAGCTCCCTACTCAACCCTGCCCAGCCCTTGACAGCGCTGGATCTCCAGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS GCA 72 bp | AGCTTGCCCAGACAGTCTTGCAGTGTGGCCTCTGGGTaGTCTCCCAGGCGCAGGTCCATCTCGTGCTGGTGC | + |
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Preference number: 6 (lower is better) Translates to: SLPRQSCSVASG*SPRRRSISCWC Trigger: GCACCAGCACGAGATGGACCTGCGCCTGGGAGAGCACCCAGAGGCCACACTGCAAGACTGTCTGGGCAAGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS CCA 72 bp | GCTGAGCAGTTTACAGCGCGATTCGGCAGTCACTTGTaGCTGGCGCGCCAGCGACTCCCGCGGGTGGAAAAG | + |
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Preference number: 6 (lower is better) Translates to: AEQFTARFGSHL*LARQRLPRVEK Trigger: CTTTTCCACCCGCGGGAGTCGCTGGCGCGCCAGCCACAAGTGACTGCCGAATCGCGCTGTAAACTGCTCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS CCA 72 bp | CTGCAGCTTGCCCAGACAGTCTTGCAGTGTGGCCTCTaGGTGCTCTCCCAGGCGCAGGTCCATCTCGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: LQLAQTVLQCGL*VLSQAQVHLVL Trigger: CAGCACGAGATGGACCTGCGCCTGGGAGAGCACCCAGAGGCCACACTGCAAGACTGTCTGGGCAAGCTGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS GCA 72 bp | ATGGACACTAGCGTCTGCAGCTTGCCCAGACAGTCTTaGAGTGTGGCCTCTGGGTGCTCTCCCAGGCGCAGG | + |
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Preference number: 6 (lower is better) Translates to: MDTSVCSLPRQS*SVASGCSPRRR Trigger: CCTGCGCCTGGGAGAGCACCCAGAGGCCACACTGCAAGACTGTCTGGGCAAGCTGCAGACGCTAGTGTCCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS CCA 72 bp | ACCGCCGCACAGGGCCAGGAGCTGTTTCAAGCGAGGTaGGTGCACCTCTACCTGCTTGCAAGCGATGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: TAAQGQELFQAR*VHLYLLASDEQ Trigger: CTGCTCATCGCTTGCAAGCAGGTAGAGGTGCACCCACCTCGCTTGAAACAGCTCCTGGCCCTGTGCGGCGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS CAA 72 bp | CTGAAGTGGAGCTTATGCAGCACGATGCACTCCAGGTaGCACAGCTGCTGCCGGGAGAACGCACCGCCGCAC | + |
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Preference number: 6 (lower is better) Translates to: LKWSLCSTMHSR*HSCCRENAPPH Trigger: GTGCGGCGGTGCGTTCTCCCGGCAGCAGCTGTGCAACCTGGAGTGCATCGTGCTGCATAAGCTCCACTTCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS TCA 72 bp | TCGGTGACCTCAGCCTGGCCGGCTTCCATGCGCCACTaGGTGAAGTGCTCCAGGAAGAAGTTGATGGTGGGC | + |
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Preference number: 6 (lower is better) Translates to: SVTSAWPASMRH*VKCSRKKLMVG Trigger: GCCCACCATCAACTTCTTCCTGGAGCACTTCACTCAGTGGCGCATGGAAGCCGGCCAGGCTGAGGTCACCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS GCA 72 bp | CCGCACAGGGCCAGGAGCTGTTTCAAGCGAGGTGGGTaGACCTCTACCTGCTTGCAAGCGATGAGCAGACAG | + |
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Preference number: 6 (lower is better) Translates to: PHRARSCFKRGG*TSTCLQAMSRQ Trigger: CTGTCTGCTCATCGCTTGCAAGCAGGTAGAGGTGCACCCACCTCGCTTGAAACAGCTCCTGGCCCTGTGCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS CCA 72 bp | AGCAGTTTACAGCGCGATTCGGCAGTCACTTGTGGCTaGCGCGCCAGCGACTCCCGCGGGTGGAAAAGATTC | + |
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Preference number: 6 (lower is better) Translates to: SSLQRDSAVTCG*RASDSRGWKRF Trigger: GAATCTTTTCCACCCGCGGGAGTCGCTGGCGCGCCAGCCACAAGTGACTGCCGAATCGCGCTGTAAACTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS CAA 90 bp | GGTCAGACACAGCGACTCGAAAGAGAGGCCGAACTGGCGGTGGACTaGCAGGAGCCAGCTGAGCAGTTTACAGCGCGATTCGGCAGTCAC | + |
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Preference number: 6 (lower is better) Translates to: GQTQRLEREAELAVD*QEPAEQFTARFGSH Trigger: GTGACTGCCGAATCGCGCTGTAAACTGCTCAGCTGGCTCCTGCAAGTCCACCGCCAGTTCGGCCTCTCTTTCGAGTCGCTGTGTCTGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS CAA 90 bp | ATGCGAGGCAGGGAGCTGCTATTGATGGACACTAGCGTCTGCAGCTaGCCCAGACAGTCTTGCAGTGTGGCCTCTGGGTGCTCTCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: MRGRELLLMDTSVCS*PRQSCSVASGCSPR Trigger: CCTGGGAGAGCACCCAGAGGCCACACTGCAAGACTGTCTGGGCAAGCTGCAGACGCTAGTGTCCATCAATAGCAGCTCCCTGCCTCGCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS CCA 72 bp | AGACACAGCGACTCGAAAGAGAGGCCGAACTGGCGGTaGACTTGCAGGAGCCAGCTGAGCAGTTTACAGCGC | + |
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Preference number: 6 (lower is better) Translates to: RHSDSKERPNWR*TCRSQLSSLQR Trigger: GCGCTGTAAACTGCTCAGCTGGCTCCTGCAAGTCCACCGCCAGTTCGGCCTCTCTTTCGAGTCGCTGTGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS CCA 72 bp | TTGCAAGCGATGAGCAGACAGGTGACCCCGAGCAGCTaGAAGCAGTCTGCAGCAACAGGGGTCGTGAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: LQAMSRQVTPSS*KQSAATGVVRR Trigger: TCTCCTCACGACCCCTGTTGCTGCAGACTGCTTCCAGCTGCTCGGGGTCACCTGTCTGCTCATCGCTTGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS CAA 72 bp | CAGCGACTCGAAAGAGAGGCCGAACTGGCGGTGGACTaGCAGGAGCCAGCTGAGCAGTTTACAGCGCGATTC | + |
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Preference number: 6 (lower is better) Translates to: QRLEREAELAVD*QEPAEQFTARF Trigger: GAATCGCGCTGTAAACTGCTCAGCTGGCTCCTGCAAGTCCACCGCCAGTTCGGCCTCTCTTTCGAGTCGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS TCA 72 bp | TCTGGGGAGGCAGAATGCGAGGCAGGGAGCTGCTATTaGTGGACACTAGCGTCTGCAGCTTGCCCAGACAGT | + |
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Preference number: 6 (lower is better) Translates to: SGEAECEAGSCY*WTLASAACPDS Trigger: ACTGTCTGGGCAAGCTGCAGACGCTAGTGTCCATCAATAGCAGCTCCCTGCCTCGCATTCTGCCTCCCCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS GCA 72 bp | CGAGGCAGGGAGCTGCTATTGATGGACACTAGCGTCTaGAGCTTGCCCAGACAGTCTTGCAGTGTGGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: RGRELLLMDTSV*SLPRQSCSVAS Trigger: AGAGGCCACACTGCAAGACTGTCTGGGCAAGCTGCAGACGCTAGTGTCCATCAATAGCAGCTCCCTGCCTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS CCA 72 bp | AGGAAGAAGTTGATGGTGGGCGCGCCCAGGCTGAAGTaGAGCTTATGCAGCACGATGCACTCCAGGTTGCAC | + |
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Preference number: 6 (lower is better) Translates to: RKKLMVGAPRLK*SLCSTMHSRLH Trigger: GTGCAACCTGGAGTGCATCGTGCTGCATAAGCTCCACTTCAGCCTGGGCGCGCCCACCATCAACTTCTTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS CAA 72 bp | AGGGAGCTGCTATTGATGGACACTAGCGTCTGCAGCTaGCCCAGACAGTCTTGCAGTGTGGCCTCTGGGTGC | + |
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Preference number: 6 (lower is better) Translates to: RELLLMDTSVCS*PRQSCSVASGC Trigger: GCACCCAGAGGCCACACTGCAAGACTGTCTGGGCAAGCTGCAGACGCTAGTGTCCATCAATAGCAGCTCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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| CDS CAA 72 bp | ATCTGGGGAGGCAGAATGCGAGGCAGGGAGCTGCTATaGATGGACACTAGCGTCTGCAGCTTGCCCAGACAG | + |
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Preference number: 6 (lower is better) Translates to: IWGGRMRGRELL*MDTSVCSLPRQ Trigger: CTGTCTGGGCAAGCTGCAGACGCTAGTGTCCATCAATAGCAGCTCCCTGCCTCGCATTCTGCCTCCCCAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038404.6 |
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