Pregenerated sensors for CCNL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029068Ensembl transcript IDs: ENSMUST00000030944.11, ENSMUST00000126346.2
Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTCCAGCTTGGGAGCAGGCGAGAACCCCGCAGCACTGTCCAGGCCTaGCGCAGTCCCTGGGAGCAGGCCCTTTGCTCGGGCCTTTGCTTC | + |
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Preference number: 1 (lower is better) Translates to: FQLGSRREPRSTVQA*RSPWEQALCSGLCF Trigger: GAAGCAAAGGCCCGAGCAAAGGGCCTGCTCCCAGGGACTGCGCCAGGCCTGGACAGTGCTGCGGGGTTCTCGCCTGCTCCCAAGCTGGAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
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| 3UTR CCA 90 bp | AGCAGGCGAGAACCCCGCAGCACTGTCCAGGCCTGGCGCAGTCCCTaGGAGCAGGCCCTTTGCTCGGGCCTTTGCTTCTTCAATGGCGTG | + |
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Preference number: 1 (lower is better) Translates to: SRREPRSTVQAWRSP*EQALCSGLCFFNGV Trigger: CACGCCATTGAAGAAGCAAAGGCCCGAGCAAAGGGCCTGCTCCCAGGGACTGCGCCAGGCCTGGACAGTGCTGCGGGGTTCTCGCCTGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
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| 3UTR GCA 90 bp | GGGACCAAGGGCAGCCACCAGGGATCCTATCTCACCTCCGATGCCTaGTGTGTCCAGGGTGGTCCCTCTCATAGCGATGGCCTGTGCGCT | + |
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Preference number: 1 (lower is better) Translates to: GTKGSHQGSYLTSDA*CVQGGPSHSDGLCA Trigger: AGCGCACAGGCCATCGCTATGAGAGGGACCACCCTGGACACAGCAGGCATCGGAGGTGAGATAGGATCCCTGGTGGCTGCCCTTGGTCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
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| 3UTR CCA 90 bp | TCCACCAGTCTAGAGCCAGCCTTCGGTGGAGAGCCTGCACTGGATTaGCTGAAGACGGCCGCTGTCCCTGCACCAAAGCACTTGGACAGC | + |
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Preference number: 1 (lower is better) Translates to: STSLEPAFGGEPALD*LKTAAVPAPKHLDS Trigger: GCTGTCCAAGTGCTTTGGTGCAGGGACAGCGGCCGTCTTCAGCCAATCCAGTGCAGGCTCTCCACCGAAGGCTGGCTCTAGACTGGTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
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| 3UTR TCA 90 bp | GGGAACGAGAGGAGCTCCGGCTACGAGACTTGTGTGGCTTCTGGGTaGGGTACTTGCAGTCCTTTGATTTCCGGGAGCCCCTCACTTCTG | + |
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Preference number: 1 (lower is better) Translates to: GNERSSGYETCVASG*GTCSPLISGSPSLL Trigger: CAGAAGTGAGGGGCTCCCGGAAATCAAAGGACTGCAAGTACCTCACCCAGAAGCCACACAAGTCTCGTAGCCGGAGCTCCTCTCGTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
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| 3UTR CCA 90 bp | CTTCGGGAACGAGAGGAGCTCCGGCTACGAGACTTGTGTGGCTTCTaGGTGAGGTACTTGCAGTCCTTTGATTTCCGGGAGCCCCTCACT | + |
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Preference number: 1 (lower is better) Translates to: LREREELRLRDLCGF*VRYLQSFDFREPLT Trigger: AGTGAGGGGCTCCCGGAAATCAAAGGACTGCAAGTACCTCACCCAGAAGCCACACAAGTCTCGTAGCCGGAGCTCCTCTCGTTCCCGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
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| 3UTR GCA 90 bp | AGCTTGTCAATAGCACCAAGCCACGCCAATGGGGACGTGTGCCTTTaGTGTTCCATCCAGCTACCTGAAGGTCTGCAGTTGAGGTGGACC | + |
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Preference number: 1 (lower is better) Translates to: SLSIAPSHANGDVCL*CSIQLPEGLQLRWT Trigger: GGTCCACCTCAACTGCAGACCTTCAGGTAGCTGGATGGAACAGCAAAGGCACACGTCCCCATTGGCGTGGCTTGGTGCTATTGACAAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030944.11 ENSMUST00000126346.2 |
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| 3UTR GCA 90 bp | AGCTCCTACAGCCCCTGGCATATAGCTAAACTGGCAGTGCACAGTTaGACACAAATATCCCACCAGGCCTGGGTCCCACAGCCAAATCCC | + |
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Preference number: 1 (lower is better) Translates to: SSYSPWHIAKLAVHS*TQISHQAWVPQPNP Trigger: GGGATTTGGCTGTGGGACCCAGGCCTGGTGGGATATTTGTGTGCAACTGTGCACTGCCAGTTTAGCTATATGCCAGGGGCTGTAGGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
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| 3UTR TCA 90 bp | TGGACCATTAACCGGGACAGATGCACAGCACTCCCCAGGCCAGCCTaGAGGGCACCTTGCCCACTGTCTCATCAATCAAATTCACCTCAA | + |
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Preference number: 1 (lower is better) Translates to: WTINRDRCTALPRPA*RAPCPLSHQSNSPQ Trigger: TTGAGGTGAATTTGATTGATGAGACAGTGGGCAAGGTGCCCTTCAGGCTGGCCTGGGGAGTGCTGTGCATCTGTCCCGGTTAATGGTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030944.11 ENSMUST00000126346.2 |
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| 3UTR GCA 90 bp | AGAGACAGCTTGTCAATAGCACCAAGCCACGCCAATGGGGACGTGTaGCTTTGCTGTTCCATCCAGCTACCTGAAGGTCTGCAGTTGAGG | + |
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Preference number: 1 (lower is better) Translates to: RDSLSIAPSHANGDV*LCCSIQLPEGLQLR Trigger: CCTCAACTGCAGACCTTCAGGTAGCTGGATGGAACAGCAAAGGCACACGTCCCCATTGGCGTGGCTTGGTGCTATTGACAAGCTGTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030944.11 ENSMUST00000126346.2 |
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| 3UTR GCA 90 bp | AAGCGGACCGTGATGGGGACCTTGAGTAGCTCTGCTCACGACTCCTaGTTTGACTTCGACTCTCCTGCCCTTTCAGCAAGCCATTTACAG | + |
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Preference number: 1 (lower is better) Translates to: KRTVMGTLSSSAHDS*FDFDSPALSASHLQ Trigger: CTGTAAATGGCTTGCTGAAAGGGCAGGAGAGTCGAAGTCAAAGCAGGAGTCGTGAGCAGAGCTACTCAAGGTCCCCATCACGGTCCGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
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| 3UTR CCA 90 bp | CAGTCCCTGGGAGCAGGCCCTTTGCTCGGGCCTTTGCTTCTTCAATaGCGTGCTTTCTCTTCTCCACTTCACTCTCCAGATGCGTCAAAT | + |
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Preference number: 1 (lower is better) Translates to: QSLGAGPLLGPLLLQ*RAFSSPLHSPDASN Trigger: ATTTGACGCATCTGGAGAGTGAAGTGGAGAAGAGAAAGCACGCCATTGAAGAAGCAAAGGCCCGAGCAAAGGGCCTGCTCCCAGGGACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
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| 3UTR TCA 90 bp | GTCCAATTAAAAACACTTTCGAAAAACATCATGCTACAAGGCCACTaGCGCCAAGGTGTGCCCAACAGGGAGGGACCAAGGGCAGCCACC | + |
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Preference number: 1 (lower is better) Translates to: VQLKTLSKNIMLQGH*RQGVPNREGPRAAT Trigger: GGTGGCTGCCCTTGGTCCCTCCCTGTTGGGCACACCTTGGCGTCAGTGGCCTTGTAGCATGATGTTTTTCGAAAGTGTTTTTAATTGGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000030944.11 ENSMUST00000126346.2 |
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| 3UTR CCA 90 bp | GCTAAACTGGCAGTGCACAGTTGCACACAAATATCCCACCAGGCCTaGGTCCCACAGCCAAATCCCAGGCATACACTCAAAGAAACAACC | + |
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Preference number: 1 (lower is better) Translates to: AKLAVHSCTQISHQA*VPQPNPRHTLKETT Trigger: GGTTGTTTCTTTGAGTGTATGCCTGGGATTTGGCTGTGGGACCCAGGCCTGGTGGGATATTTGTGTGCAACTGTGCACTGCCAGTTTAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
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| 3UTR CCA 90 bp | AGAACAGGGAGCAAGGACCAGGGCATATACAGCTCCTACAGCCCCTaGCATATAGCTAAACTGGCAGTGCACAGTTGCACACAAATATCC | + |
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Preference number: 1 (lower is better) Translates to: RTGSKDQGIYSSYSP*HIAKLAVHSCTQIS Trigger: GGATATTTGTGTGCAACTGTGCACTGCCAGTTTAGCTATATGCCAGGGGCTGTAGGAGCTGTATATGCCCTGGTCCTTGCTCCCTGTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
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| 3UTR CCA 90 bp | TGTCCTGAGAATTGTTTATTCAACCACGTAAAATTTCTCTCCAGCTaGTGGCCTGCACTCAGCATTGCACAGATAAAAATATACGGACTT | + |
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Preference number: 1 (lower is better) Translates to: CPENCLFNHVKFLSS*WPALSIAQIKIYGL Trigger: AAGTCCGTATATTTTTATCTGTGCAATGCTGAGTGCAGGCCACCAGCTGGAGAGAAATTTTACGTGGTTGAATAAACAATTCTCAGGACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
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| 3UTR-3UTR GCA 90 bp | CAGGCGAGAACCCCGCAGCACTGTCCAGGCCTGGCGCAGTCCCTGGGAGCAGGCGACGGCCGCTGTCCCTaGACCAAAGCACTTGGACAG | + |
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Preference number: 2 (lower is better) Translates to: QARTPQHCPGLAQSLGAGDGRCP*TKALGQ Trigger: CTGTCCAAGTGCTTTGGTGCAGGGACAGCGGCCGTC...GCCTGCTCCCAGGGACTGCGCCAGGCCTGGACAGTGCTGCGGGGTTCTCGCCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGCGAGAACCCCGCAGCACTGTCCAGGCCTGGCGCAGTCCCTGGGAGCAGGCGGGGACGTGTGCCTTTaGTGTTCCATCCAGCTACCT | + |
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Preference number: 2 (lower is better) Translates to: QARTPQHCPGLAQSLGAGGDVCL*CSIQLP Trigger: AGGTAGCTGGATGGAACAGCAAAGGCACACGTCCCC...GCCTGCTCCCAGGGACTGCGCCAGGCCTGGACAGTGCTGCGGGGTTCTCGCCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
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| 3UTR-3UTR TCA 90 bp | TCTCGTGACCGGCTTCGGGAACGAGAGGAGCTCCGGCTACGAGACTTGTGTGGCCTGCACTGGATTGGCTaGAGACGGCCGCTGTCCCTG | + |
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Preference number: 2 (lower is better) Translates to: SRDRLREREELRLRDLCGLHWIG*RRPLSL Trigger: CAGGGACAGCGGCCGTCTTCAGCCAATCCAGTGCAG...GCCACACAAGTCTCGTAGCCGGAGCTCCTCTCGTTCCCGAAGCCGGTCACGAGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGCGCTCTTTCCAGAGGGCGGGGAAGGCTTGCCTCCTTTACCTTCTTTTGGGGCCTGGCGCAGTCCCTaGGAGCAGGCCCTTTGCTCG | + |
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Preference number: 2 (lower is better) Translates to: LALFPEGGEGLPPLPSFGAWRSP*EQALCS Trigger: CGAGCAAAGGGCCTGCTCCCAGGGACTGCGCCAGGC...CCCAAAAGAAGGTAAAGGAGGCAAGCCTTCCCCGCCCTCTGGAAAGAGCGCCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
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| 3UTR-3UTR CCA 90 bp | CAGATGCACAGCACTCCCCAGGCCAGCCTGAAGGGCACCTTGCCCACTGTCTCAACAGGGCTGTGGCCCTaGGCTTTCTTTGGGCCTTCC | + |
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Preference number: 2 (lower is better) Translates to: QMHSTPQASLKGTLPTVSTGLWP*AFFGPS Trigger: GGAAGGCCCAAAGAAAGCCCAGGGCCACAGCCCTGT...TGAGACAGTGGGCAAGGTGCCCTTCAGGCTGGCCTGGGGAGTGCTGTGCATCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
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| 3UTR-3UTR CCA 90 bp | CCAACAGGGAGGGACCAAGGGCAGCCACCAGGGATCCTATCTCACCTCCGATGCAGAGCCAGCCTTCGGTaGAGAGCCTGCACTGGATTG | + |
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Preference number: 2 (lower is better) Translates to: PTGRDQGQPPGILSHLRCRASLR*RACTGL Trigger: CAATCCAGTGCAGGCTCTCCACCGAAGGCTGGCTCT...GCATCGGAGGTGAGATAGGATCCCTGGTGGCTGCCCTTGGTCCCTCCCTGTTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
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| 3UTR CAA 90 bp | TTCCACCAGTCTAGAGCCAGCCTTCGGTGGAGAGCCTGCACTGGATaGGCTGAAGACGGCCGCTGTCCCTGCACCAAAGCACTTGGACAG | + |
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Preference number: 2 (lower is better) Translates to: FHQSRASLRWRACTG*AEDGRCPCTKALGQ Trigger: CTGTCCAAGTGCTTTGGTGCAGGGACAGCGGCCGTCTTCAGCCAATCCAGTGCAGGCTCTCCACCGAAGGCTGGCTCTAGACTGGTGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
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| 3UTR-3UTR TCA 90 bp | TCTCGTGACCGGCTTCGGGAACGAGAGGAGCTCCGGCTACGAGACTTGTGTGGCCTGAAGGTCTGCAGTTaGGGTGGACCATTAACCGGG | + |
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Preference number: 2 (lower is better) Translates to: SRDRLREREELRLRDLCGLKVCS*GGPLTG Trigger: CCCGGTTAATGGTCCACCTCAACTGCAGACCTTCAG...GCCACACAAGTCTCGTAGCCGGAGCTCCTCTCGTTCCCGAAGCCGGTCACGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
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| 3UTR-3UTR GCA 90 bp | TCTCGTGACCGGCTTCGGGAACGAGAGGAGCTCCGGCTACGAGACTTGTGTGGCCTTCGGTGGAGAGCCTaGACTGGATTGGCTGAAGAC | + |
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Preference number: 2 (lower is better) Translates to: SRDRLREREELRLRDLCGLRWRA*TGLAED Trigger: GTCTTCAGCCAATCCAGTGCAGGCTCTCCACCGAAG...GCCACACAAGTCTCGTAGCCGGAGCTCCTCTCGTTCCCGAAGCCGGTCACGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
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| 3UTR CAA 90 bp | ACAGGGCTGTGGCCCTGGGCTTTCTTTGGGCCTTCCATTTTCCGTTaGGCGCTCTTTCCAGAGGGCGGGGAAGGCTTGCCTCCTTTACCT | + |
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Preference number: 2 (lower is better) Translates to: TGLWPWAFFGPSIFR*ALFPEGGEGLPPLP Trigger: AGGTAAAGGAGGCAAGCCTTCCCCGCCCTCTGGAAAGAGCGCCAAACGGAAAATGGAAGGCCCAAAGAAAGCCCAGGGCCACAGCCCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
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| 3UTR CAA 90 bp | GCCCTTTCAGCAAGCCATTTACAGGGCTGTGGCCCTGGGCTTTCTTaGGGCCTTCCATTTTCCGTTTGGCGCTCTTTCCAGAGGGCGGGG | + |
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Preference number: 2 (lower is better) Translates to: ALSASHLQGCGPGLS*GLPFSVWRSFQRAG Trigger: CCCCGCCCTCTGGAAAGAGCGCCAAACGGAAAATGGAAGGCCCAAAGAAAGCCCAGGGCCACAGCCCTGTAAATGGCTTGCTGAAAGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
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| 3UTR-3UTR TCA 90 bp | CCAACAGGGAGGGACCAAGGGCAGCCACCAGGGATCCTATCTCACCTCCGATGCTGTGTGGCTTCTGGGTaGGGTACTTGCAGTCCTTTG | + |
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Preference number: 2 (lower is better) Translates to: PTGRDQGQPPGILSHLRCCVASG*GTCSPL Trigger: CAAAGGACTGCAAGTACCTCACCCAGAAGCCACACA...GCATCGGAGGTGAGATAGGATCCCTGGTGGCTGCCCTTGGTCCCTCCCTGTTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGCCACCAGGGATCCTATCTCACCTCCGATGCCTGCTGTGTCCAGGGTGGTCGACTTGTGTGGCTTCTaGGTGAGGTACTTGCAGTCC | + |
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Preference number: 2 (lower is better) Translates to: AATRDPISPPMPAVSRVVDLCGF*VRYLQS Trigger: GGACTGCAAGTACCTCACCCAGAAGCCACACAAGTC...GACCACCCTGGACACAGCAGGCATCGGAGGTGAGATAGGATCCCTGGTGGCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
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| 3UTR CAA 90 bp | CCCTCACTTCTGAGCCTTTGTAGGGAGCACCTCGGTGTACCTGCCTaGGAGGAGAGTCACTTCGGCTCCGAGAACGACTCTGTGACTTGG | + |
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Preference number: 2 (lower is better) Translates to: PSLLSLCREHLGVPA*EESHFGSENDSVTW Trigger: CCAAGTCACAGAGTCGTTCTCGGAGCCGAAGTGACTCTCCTCCAAGGCAGGTACACCGAGGTGCTCCCTACAAAGGCTCAGAAGTGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
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| 3UTR CAA 90 bp | TCTCGTGACCGGCTTCGGGAACGAGAGGAGCTCCGGCTACGAGACTaGTGTGGCTTCTGGGTGAGGTACTTGCAGTCCTTTGATTTCCGG | + |
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Preference number: 2 (lower is better) Translates to: SRDRLREREELRLRD*CGFWVRYLQSFDFR Trigger: CCGGAAATCAAAGGACTGCAAGTACCTCACCCAGAAGCCACACAAGTCTCGTAGCCGGAGCTCCTCTCGTTCCCGAAGCCGGTCACGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
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| 3UTR CAA 90 bp | GACGTGTGCCTTTGCTGTTCCATCCAGCTACCTGAAGGTCTGCAGTaGAGGTGGACCATTAACCGGGACAGATGCACAGCACTCCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: DVCLCCSIQLPEGLQ*RWTINRDRCTALPR Trigger: CCTGGGGAGTGCTGTGCATCTGTCCCGGTTAATGGTCCACCTCAACTGCAGACCTTCAGGTAGCTGGATGGAACAGCAAAGGCACACGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030944.11 ENSMUST00000126346.2 |
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| 3UTR CAA 90 bp | GAGGAGCTCCGGCTACGAGACTTGTGTGGCTTCTGGGTGAGGTACTaGCAGTCCTTTGATTTCCGGGAGCCCCTCACTTCTGAGCCTTTG | + |
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Preference number: 2 (lower is better) Translates to: EELRLRDLCGFWVRY*QSFDFREPLTSEPL Trigger: CAAAGGCTCAGAAGTGAGGGGCTCCCGGAAATCAAAGGACTGCAAGTACCTCACCCAGAAGCCACACAAGTCTCGTAGCCGGAGCTCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
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| 3UTR-3UTR CCA 90 bp | AATGAGAACAGGGAGCAAGGACCAGGGCATATACAGCTCCTACAGCCCCTGGCAATATCCCACCAGGCCTaGGTCCCACAGCCAAATCCC | + |
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Preference number: 2 (lower is better) Translates to: NENREQGPGHIQLLQPLAISHQA*VPQPNP Trigger: GGGATTTGGCTGTGGGACCCAGGCCTGGTGGGATAT...TGCCAGGGGCTGTAGGAGCTGTATATGCCCTGGTCCTTGCTCCCTGTTCTCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
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| 3UTR-3UTR GCA 90 bp | TCTCGTGACCGGCTTCGGGAACGAGAGGAGCTCCGGCTACGAGACTTGTGTGGCGCTTCTTCAATGGCGTaGTTTCTCTTCTCCACTTCA | + |
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Preference number: 2 (lower is better) Translates to: SRDRLREREELRLRDLCGASSMA*FLFSTS Trigger: TGAAGTGGAGAAGAGAAAGCACGCCATTGAAGAAGC...GCCACACAAGTCTCGTAGCCGGAGCTCCTCTCGTTCCCGAAGCCGGTCACGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGCCACCAGGGATCCTATCTCACCTCCGATGCCTGCTGTGTCCAGGGTGGTCCCTTTGCTTCTTCAATaGCGTGCTTTCTCTTCTCCA | + |
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Preference number: 2 (lower is better) Translates to: AATRDPISPPMPAVSRVVPLLLQ*RAFSSP Trigger: TGGAGAAGAGAAAGCACGCCATTGAAGAAGCAAAGG...GACCACCCTGGACACAGCAGGCATCGGAGGTGAGATAGGATCCCTGGTGGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
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| 3UTR-3UTR GCA 90 bp | CCATTTTCCGTTTGGCGCTCTTTCCAGAGGGCGGGGAAGGCTTGCCTCCTTTACTACAGGCACAAGCAATaGTTTCAGGCTGGAACCGGA | + |
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Preference number: 2 (lower is better) Translates to: PFSVWRSFQRAGKACLLYYRHKQ*FQAGTG Trigger: TCCGGTTCCAGCCTGAAAGCATTGCTTGTGCCTGTA...GTAAAGGAGGCAAGCCTTCCCCGCCCTCTGGAAAGAGCGCCAAACGGAAAATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
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| 3UTR-3UTR CCA 90 bp | AATGAGAACAGGGAGCAAGGACCAGGGCATATACAGCTCCTACAGCCCCTGGCATTTCTCTCCAGCTGGTaGCCTGCACTCAGCATTGCA | + |
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Preference number: 2 (lower is better) Translates to: NENREQGPGHIQLLQPLAFLSSW*PALSIA Trigger: TGCAATGCTGAGTGCAGGCCACCAGCTGGAGAGAAA...TGCCAGGGGCTGTAGGAGCTGTATATGCCCTGGTCCTTGCTCCCTGTTCTCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
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| 3UTR-3UTR CCA 90 bp | CTGGGAGCAGGCCCTTTGCTCGGGCCTTTGCTTCTTCAATGGCGTGCTTTCTCTCTGCACCAAAGCACTTaGACAGCAGAGGAGAAGTCT | + |
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Preference number: 2 (lower is better) Translates to: LGAGPLLGPLLLQWRAFSLHQST*TAEEKS Trigger: AGACTTCTCCTCTGCTGTCCAAGTGCTTTGGTGCAG...AGAGAAAGCACGCCATTGAAGAAGCAAAGGCCCGAGCAAAGGGCCTGCTCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
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| 3UTR-3UTR GCA 90 bp | CAGATGCACAGCACTCCCCAGGCCAGCCTGAAGGGCACCTTGCCCACTGTCTCAACTTCACTCTCCAGATaGGTCAAATCAACCTTTTTC | + |
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Preference number: 2 (lower is better) Translates to: QMHSTPQASLKGTLPTVSTSLSR*VKSTFF Trigger: GAAAAAGGTTGATTTGACGCATCTGGAGAGTGAAGT...TGAGACAGTGGGCAAGGTGCCCTTCAGGCTGGCCTGGGGAGTGCTGTGCATCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
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| 3UTR CAA 90 bp | TGCCTTGGAGGAGAGTCACTTCGGCTCCGAGAACGACTCTGTGACTaGGACCCACCTGAGGTAGAGCCACTATCACTTTTCCTTCTCTTT | + |
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Preference number: 2 (lower is better) Translates to: CLGGESLRLRERLCD*DPPEVEPLSLFLLF Trigger: AAAGAGAAGGAAAAGTGATAGTGGCTCTACCTCAGGTGGGTCCAAGTCACAGAGTCGTTCTCGGAGCCGAAGTGACTCTCCTCCAAGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
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| 3UTR-3UTR TCA 90 bp | CCCTGGCATATAGCTAAACTGGCAGTGCACAGTTGCACACAAATATCCCACCAGCTGAAGGTCTGCAGTTaGGGTGGACCATTAACCGGG | + |
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Preference number: 2 (lower is better) Translates to: PWHIAKLAVHSCTQISHQLKVCS*GGPLTG Trigger: CCCGGTTAATGGTCCACCTCAACTGCAGACCTTCAG...CTGGTGGGATATTTGTGTGCAACTGTGCACTGCCAGTTTAGCTATATGCCAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
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| 3UTR-3UTR GCA 90 bp | CCCTGGCATATAGCTAAACTGGCAGTGCACAGTTGCACACAAATATCCCACCAGGGGGACGTGTGCCTTTaGTGTTCCATCCAGCTACCT | + |
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Preference number: 2 (lower is better) Translates to: PWHIAKLAVHSCTQISHQGDVCL*CSIQLP Trigger: AGGTAGCTGGATGGAACAGCAAAGGCACACGTCCCC...CTGGTGGGATATTTGTGTGCAACTGTGCACTGCCAGTTTAGCTATATGCCAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
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| 3UTR CAA 90 bp | TATCACTTTTCCTTCTCTTTGGAGAAGCGGACCGTGATGGGGACCTaGAGTAGCTCTGCTCACGACTCCTGCTTTGACTTCGACTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: YHFSFSLEKRTVMGT*SSSAHDSCFDFDSP Trigger: AGGAGAGTCGAAGTCAAAGCAGGAGTCGTGAGCAGAGCTACTCAAGGTCCCCATCACGGTCCGCTTCTCCAAAGAGAAGGAAAAGTGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
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| 3UTR-3UTR GCA 90 bp | CAGCCAAATCCCAGGCATACACTCAAAGAAACAACCAGAATGACAGCCCACAAACTCCAGCTGGTGGCCTaGACTCAGCATTGCACAGAT | + |
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Preference number: 2 (lower is better) Translates to: QPNPRHTLKETTRMTAHKLQLVA*TQHCTD Trigger: ATCTGTGCAATGCTGAGTGCAGGCCACCAGCTGGAG...TTTGTGGGCTGTCATTCTGGTTGTTTCTTTGAGTGTATGCCTGGGATTTGGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
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| 3UTR CAA 90 bp | CAGGGTGGTCCCTCTCATAGCGATGGCCTGTGCGCTCATATGACCTaGAGCGCTCACGTCTTTGATCTCTATAGTAATGACTTTTCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: QGGPSHSDGLCAHMT*SAHVFDLYSNDFSS Trigger: AGAAGAAAAGTCATTACTATAGAGATCAAAGACGTGAGCGCTCAAGGTCATATGAGCGCACAGGCCATCGCTATGAGAGGGACCACCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
||
| 3UTR-3UTR GCA 90 bp | AAGAGACAGCTTGTCAATAGCACCAAGCCACGCCAATGGGGACGTGTGCCTTTGGCCTGCACTCAGCATTaGACAGATAAAAATATACGG | + |
|
Preference number: 2 (lower is better) Translates to: KRQLVNSTKPRQWGRVPLACTQH*TDKNIR Trigger: CCGTATATTTTTATCTGTGCAATGCTGAGTGCAGGC...CAAAGGCACACGTCCCCATTGGCGTGGCTTGGTGCTATTGACAAGCTGTCTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030944.11 ENSMUST00000126346.2 |
||
| 3UTR-3UTR TCA 90 bp | CCCTGGCATATAGCTAAACTGGCAGTGCACAGTTGCACACAAATATCCCACCAGAAGAAACAACCAGAATaGCAGCCCACAAAGTCTTAC | + |
|
Preference number: 2 (lower is better) Translates to: PWHIAKLAVHSCTQISHQKKQPE*QPTKSY Trigger: GTAAGACTTTGTGGGCTGTCATTCTGGTTGTTTCTT...CTGGTGGGATATTTGTGTGCAACTGTGCACTGCCAGTTTAGCTATATGCCAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
||
| 3UTR-3UTR TCA 90 bp | CCCTGGCATATAGCTAAACTGGCAGTGCACAGTTGCACACAAATATCCCACCAGTGTTTATTTACAACGTaGATAGAGAACAAGGGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: PWHIAKLAVHSCTQISHQCLFTT*IENKGA Trigger: AGCCCCCTTGTTCTCTATTCACGTTGTAAATAAACA...CTGGTGGGATATTTGTGTGCAACTGTGCACTGCCAGTTTAGCTATATGCCAGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
||
| 3UTR-3UTR GCA 90 bp | GCCAAATCCCAGGCATACACTCAAAGAAACAACCAGAATGACAGCCCACAAAGTTTTCGAAAAACATCATaGTACAAGGCCACTGACGCC | + |
|
Preference number: 2 (lower is better) Translates to: AKSQAYTQRNNQNDSPQSFRKTS*YKATDA Trigger: GGCGTCAGTGGCCTTGTAGCATGATGTTTTTCGAAA...ACTTTGTGGGCTGTCATTCTGGTTGTTTCTTTGAGTGTATGCCTGGGATTTGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
||
| 3UTR-3UTR GCA 90 bp | CTCATTGTGAACCACTGCAAAATATGTACACAAGTACAACCTAATATAGGCAAATTTCGAAAAACATCATaGTACAAGGCCACTGACGCC | + |
|
Preference number: 2 (lower is better) Translates to: LIVNHCKICTQVQPNIGKFRKTS*YKATDA Trigger: GGCGTCAGTGGCCTTGTAGCATGATGTTTTTCGAAA...TTTGCCTATATTAGGTTGTACTTGTGTACATATTTTGCAGTGGTTCACAATGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030944.11 ENSMUST00000126346.2 |
||
| 3UTR CCA 72 bp | GGGAGCAGGCGAGAACCCCGCAGCACTGTCCAGGCCTaGCGCAGTCCCTGGGAGCAGGCCCTTTGCTCGGGC | + |
|
Preference number: 3 (lower is better) Translates to: GSRREPRSTVQA*RSPWEQALCSG Trigger: GCCCGAGCAAAGGGCCTGCTCCCAGGGACTGCGCCAGGCCTGGACAGTGCTGCGGGGTTCTCGCCTGCTCCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
||
| 3UTR CCA 72 bp | GAACCCCGCAGCACTGTCCAGGCCTGGCGCAGTCCCTaGGAGCAGGCCCTTTGCTCGGGCCTTTGCTTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: EPRSTVQAWRSP*EQALCSGLCFF Trigger: GAAGAAGCAAAGGCCCGAGCAAAGGGCCTGCTCCCAGGGACTGCGCCAGGCCTGGACAGTGCTGCGGGGTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
||
| 3UTR GCA 72 bp | TTCCACCAGTCTAGAGCCAGCCTTCGGTGGAGAGCCTaGACTGGATTGGCTGAAGACGGCCGCTGTCCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: FHQSRASLRWRA*TGLAEDGRCPC Trigger: GCAGGGACAGCGGCCGTCTTCAGCCAATCCAGTGCAGGCTCTCCACCGAAGGCTGGCTCTAGACTGGTGGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
||
| 3UTR GCA 72 bp | GGCAGCCACCAGGGATCCTATCTCACCTCCGATGCCTaGTGTGTCCAGGGTGGTCCCTCTCATAGCGATGGC | + |
|
Preference number: 3 (lower is better) Translates to: GSHQGSYLTSDA*CVQGGPSHSDG Trigger: GCCATCGCTATGAGAGGGACCACCCTGGACACAGCAGGCATCGGAGGTGAGATAGGATCCCTGGTGGCTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAACAGGGAGGGACCAAGGGCAGCCACCAGGGATCCTATCTCACCTCCGATGCCCTGAAGGTCTGCAGTaGAGGTGGACCATTAACCGG | + |
|
Preference number: 3 (lower is better) Translates to: PTGRDQGQPPGILSHLRCPEGLQ*RWTINR Trigger: CCGGTTAATGGTCCACCTCAACTGCAGACCTTCAGG...GCATCGGAGGTGAGATAGGATCCCTGGTGGCTGCCCTTGGTCCCTCCCTGTTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTCGTGACCGGCTTCGGGAACGAGAGGAGCTCCGGCTACGAGACTTGTGTGGCGGCCCTGGGCTTTCTTaGGGCCTTCCATTTTCCGTT | + |
|
Preference number: 3 (lower is better) Translates to: SRDRLREREELRLRDLCGGPGLS*GLPFSV Trigger: AACGGAAAATGGAAGGCCCAAAGAAAGCCCAGGGCC...GCCACACAAGTCTCGTAGCCGGAGCTCCTCTCGTTCCCGAAGCCGGTCACGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAGCCACCAGGGATCCTATCTCACCTCCGATGCCTGCTGTGTCCAGGGTGGTCGAACGACTCTGTGACTaGGACCCACCTGAGGTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: AATRDPISPPMPAVSRVVERLCD*DPPEVE Trigger: CTCTACCTCAGGTGGGTCCAAGTCACAGAGTCGTTC...GACCACCCTGGACACAGCAGGCATCGGAGGTGAGATAGGATCCCTGGTGGCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
||
| 3UTR TCA 72 bp | AGGAGCTCCGGCTACGAGACTTGTGTGGCTTCTGGGTaGGGTACTTGCAGTCCTTTGATTTCCGGGAGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: RSSGYETCVASG*GTCSPLISGSP Trigger: GGGGCTCCCGGAAATCAAAGGACTGCAAGTACCTCACCCAGAAGCCACACAAGTCTCGTAGCCGGAGCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
||
| 3UTR GCA 72 bp | GCCTGCACTGGATTGGCTGAAGACGGCCGCTGTCCCTaGACCAAAGCACTTGGACAGCAGAGGAGAAGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: ACTGLAEDGRCP*TKALGQQRRSL Trigger: AAGACTTCTCCTCTGCTGTCCAAGTGCTTTGGTGCAGGGACAGCGGCCGTCTTCAGCCAATCCAGTGCAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
||
| 3UTR GCA 72 bp | CGCAGTCCCTGGGAGCAGGCCCTTTGCTCGGGCCTTTaGTTCTTCAATGGCGTGCTTTCTCTTCTCCACTTC | + |
|
Preference number: 3 (lower is better) Translates to: RSPWEQALCSGL*FFNGVLSLLHF Trigger: GAAGTGGAGAAGAGAAAGCACGCCATTGAAGAAGCAAAGGCCCGAGCAAAGGGCCTGCTCCCAGGGACTGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
||
| 3UTR TCA 72 bp | CTTCTTGTATTTTCCAGAATTGTCCGTCCGCTCTCGTaGCCGGCTTCGGGAACGAGAGGAGCTCCGGCTACG | + |
|
Preference number: 3 (lower is better) Translates to: LLVFSRIVRPLS*PASGTRGAPAT Trigger: CGTAGCCGGAGCTCCTCTCGTTCCCGAAGCCGGTCACGAGAGCGGACGGACAATTCTGGAAAATACAAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
||
| 3UTR CCA 72 bp | CGAGAGGAGCTCCGGCTACGAGACTTGTGTGGCTTCTaGGTGAGGTACTTGCAGTCCTTTGATTTCCGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: REELRLRDLCGF*VRYLQSFDFRE Trigger: CTCCCGGAAATCAAAGGACTGCAAGTACCTCACCCAGAAGCCACACAAGTCTCGTAGCCGGAGCTCCTCTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
||
| 3UTR GCA 72 bp | ATAGCACCAAGCCACGCCAATGGGGACGTGTGCCTTTaGTGTTCCATCCAGCTACCTGAAGGTCTGCAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: IAPSHANGDVCL*CSIQLPEGLQL Trigger: CAACTGCAGACCTTCAGGTAGCTGGATGGAACAGCAAAGGCACACGTCCCCATTGGCGTGGCTTGGTGCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030944.11 ENSMUST00000126346.2 |
||
| 3UTR GCA 72 bp | AGCCCCTGGCATATAGCTAAACTGGCAGTGCACAGTTaGACACAAATATCCCACCAGGCCTGGGTCCCACAG | + |
|
Preference number: 3 (lower is better) Translates to: SPWHIAKLAVHS*TQISHQAWVPQ Trigger: CTGTGGGACCCAGGCCTGGTGGGATATTTGTGTGCAACTGTGCACTGCCAGTTTAGCTATATGCCAGGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
||
| 3UTR GCA 72 bp | GTGATGGGGACCTTGAGTAGCTCTGCTCACGACTCCTaGTTTGACTTCGACTCTCCTGCCCTTTCAGCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: VMGTLSSSAHDS*FDFDSPALSAS Trigger: GCTTGCTGAAAGGGCAGGAGAGTCGAAGTCAAAGCAGGAGTCGTGAGCAGAGCTACTCAAGGTCCCCATCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
||
| 3UTR CCA 72 bp | TGTTCCATCCAGCTACCTGAAGGTCTGCAGTTGAGGTaGACCATTAACCGGGACAGATGCACAGCACTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: CSIQLPEGLQLR*TINRDRCTALP Trigger: GGGGAGTGCTGTGCATCTGTCCCGGTTAATGGTCCACCTCAACTGCAGACCTTCAGGTAGCTGGATGGAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030944.11 ENSMUST00000126346.2 |
||
| 3UTR CCA 72 bp | TGCCCTTTCAGCAAGCCATTTACAGGGCTGTGGCCCTaGGCTTTCTTTGGGCCTTCCATTTTCCGTTTGGCG | + |
|
Preference number: 3 (lower is better) Translates to: CPFSKPFTGLWP*AFFGPSIFRLA Trigger: CGCCAAACGGAAAATGGAAGGCCCAAAGAAAGCCCAGGGCCACAGCCCTGTAAATGGCTTGCTGAAAGGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
||
| 3UTR CCA 72 bp | CTCTCCTGCCCTTTCAGCAAGCCATTTACAGGGCTGTaGCCCTGGGCTTTCTTTGGGCCTTCCATTTTCCGT | + |
|
Preference number: 3 (lower is better) Translates to: LSCPFSKPFTGL*PWAFFGPSIFR Trigger: ACGGAAAATGGAAGGCCCAAAGAAAGCCCAGGGCCACAGCCCTGTAAATGGCTTGCTGAAAGGGCAGGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
||
| 3UTR GCA 72 bp | AGGCCCTTTGCTCGGGCCTTTGCTTCTTCAATGGCGTaGTTTCTCTTCTCCACTTCACTCTCCAGATGCGTC | + |
|
Preference number: 3 (lower is better) Translates to: RPFARAFASSMA*FLFSTSLSRCV Trigger: GACGCATCTGGAGAGTGAAGTGGAGAAGAGAAAGCACGCCATTGAAGAAGCAAAGGCCCGAGCAAAGGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
||
| 3UTR CCA 72 bp | AAGAGACAGCTTGTCAATAGCACCAAGCCACGCCAATaGGGACGTGTGCCTTTGCTGTTCCATCCAGCTACC | + |
|
Preference number: 3 (lower is better) Translates to: KRQLVNSTKPRQ*GRVPLLFHPAT Trigger: GGTAGCTGGATGGAACAGCAAAGGCACACGTCCCCATTGGCGTGGCTTGGTGCTATTGACAAGCTGTCTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030944.11 ENSMUST00000126346.2 |
||
| 3UTR CCA 72 bp | GCAGTGCACAGTTGCACACAAATATCCCACCAGGCCTaGGTCCCACAGCCAAATCCCAGGCATACACTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: AVHSCTQISHQA*VPQPNPRHTLK Trigger: TTTGAGTGTATGCCTGGGATTTGGCTGTGGGACCCAGGCCTGGTGGGATATTTGTGTGCAACTGTGCACTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
||
| 3UTR CCA 72 bp | GGAGCAGGCCCTTTGCTCGGGCCTTTGCTTCTTCAATaGCGTGCTTTCTCTTCTCCACTTCACTCTCCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: GAGPLLGPLLLQ*RAFSSPLHSPD Trigger: ATCTGGAGAGTGAAGTGGAGAAGAGAAAGCACGCCATTGAAGAAGCAAAGGCCCGAGCAAAGGGCCTGCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGCATATAGCTAAACTGGCAGTGCACAGTTGCACACAAATATCCCACCAGGCCCCTGAAGGTCTGCAGTaGAGGTGGACCATTAACCGG | + |
|
Preference number: 3 (lower is better) Translates to: WHIAKLAVHSCTQISHQAPEGLQ*RWTINR Trigger: CCGGTTAATGGTCCACCTCAACTGCAGACCTTCAGG...GGCCTGGTGGGATATTTGTGTGCAACTGTGCACTGCCAGTTTAGCTATATGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
||
| 3UTR-3UTR CAA 90 bp | AGGGCACCTTGCCCACTGTCTCATCAATCAAATTCACCTCAAGGTCCAATTAAAAGAGCCTGCACTGGATaGGCTGAAGACGGCCGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: RAPCPLSHQSNSPQGPIKRACTG*AEDGRC Trigger: ACAGCGGCCGTCTTCAGCCAATCCAGTGCAGGCTCT...TTTAATTGGACCTTGAGGTGAATTTGATTGATGAGACAGTGGGCAAGGTGCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
||
| 3UTR TCA 72 bp | AAAACACTTTCGAAAAACATCATGCTACAAGGCCACTaGCGCCAAGGTGTGCCCAACAGGGAGGGACCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: KTLSKNIMLQGH*RQGVPNREGPR Trigger: CCTTGGTCCCTCCCTGTTGGGCACACCTTGGCGTCAGTGGCCTTGTAGCATGATGTTTTTCGAAAGTGTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030944.11 ENSMUST00000126346.2 |
||
| 3UTR-3UTR CAA 90 bp | AACAAGTGTCCTGAGAATTGTTTATTCAACCACGTAAAATTTCTCTCCAGCTGGTGGGGACGTGTGCCTTaGCTGTTCCATCCAGCTACC | + |
|
Preference number: 3 (lower is better) Translates to: NKCPENCLFNHVKFLSSWWGRVP*LFHPAT Trigger: GGTAGCTGGATGGAACAGCAAAGGCACACGTCCCCA...CCAGCTGGAGAGAAATTTTACGTGGTTGAATAAACAATTCTCAGGACACTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
||
| 3UTR-3UTR CAA 90 bp | TCACCTCAAGGTCCAATTAAAAACACTTTCGAAAAACATCATGCTACAAGGCCACCTGCACCAAAGCACTaGGACAGCAGAGGAGAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: SPQGPIKNTFEKHHATRPPAPKH*DSRGEV Trigger: GACTTCTCCTCTGCTGTCCAAGTGCTTTGGTGCAGG...TGGCCTTGTAGCATGATGTTTTTCGAAAGTGTTTTTAATTGGACCTTGAGGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
||
| CDS-3UTR CCA 90 bp | CAGATGCACAGCACTCCCCAGGCCAGCCTGAAGGGCACCTTGCCCACTGTCTCACCATTTACAGGGCTGTaGCCCTGGGCTTTCTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QMHSTPQASLKGTLPTVSPFTGL*PWAFFG Trigger: CCCAAAGAAAGCCCAGGGCCACAGCCCTGTAAATGG...TGAGACAGTGGGCAAGGTGCCCTTCAGGCTGGCCTGGGGAGTGCTGTGCATCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
||
| 3UTR CAA 72 bp | TGGCCCTGGGCTTTCTTTGGGCCTTCCATTTTCCGTTaGGCGCTCTTTCCAGAGGGCGGGGAAGGCTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: WPWAFFGPSIFR*ALFPEGGEGLP Trigger: AGGCAAGCCTTCCCCGCCCTCTGGAAAGAGCGCCAAACGGAAAATGGAAGGCCCAAAGAAAGCCCAGGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
||
| CDS-3UTR CCA 90 bp | TCATGCTACAAGGCCACTGACGCCAAGGTGTGCCCAACAGGGAGGGACCAAGGGTCGGTGTACCTGCCTTaGAGGAGAGTCACTTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SCYKATDAKVCPTGRDQGSVYLP*RRVTSA Trigger: AGCCGAAGTGACTCTCCTCCAAGGCAGGTACACCGA...CCCTTGGTCCCTCCCTGTTGGGCACACCTTGGCGTCAGTGGCCTTGTAGCATGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
||
| CDS-3UTR GCA 90 bp | CAGATGCACAGCACTCCCCAGGCCAGCCTGAAGGGCACCTTGCCCACTGTCTCATACAGGCACAAGCAATaGTTTCAGGCTGGAACCGGA | + |
|
Preference number: 4 (lower is better) Translates to: QMHSTPQASLKGTLPTVSYRHKQ*FQAGTG Trigger: TCCGGTTCCAGCCTGAAAGCATTGCTTGTGCCTGTA...TGAGACAGTGGGCAAGGTGCCCTTCAGGCTGGCCTGGGGAGTGCTGTGCATCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
||
| 3UTR CAA 72 bp | CTGAGCCTTTGTAGGGAGCACCTCGGTGTACCTGCCTaGGAGGAGAGTCACTTCGGCTCCGAGAACGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSLCREHLGVPA*EESHFGSENDS Trigger: AGAGTCGTTCTCGGAGCCGAAGTGACTCTCCTCCAAGGCAGGTACACCGAGGTGCTCCCTACAAAGGCTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
||
| CDS-3UTR TCA 90 bp | CCAACAGGGAGGGACCAAGGGCAGCCACCAGGGATCCTATCTCACCTCCGATGCAGGTTAACATACTCTTaGTCAAGCACCAGAGGCACG | + |
|
Preference number: 4 (lower is better) Translates to: PTGRDQGQPPGILSHLRCRLTYS*SSTRGT Trigger: CGTGCCTCTGGTGCTTGATCAAGAGTATGTTAACCT...GCATCGGAGGTGAGATAGGATCCCTGGTGGCTGCCCTTGGTCCCTCCCTGTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
||
| CDS-3UTR TCA 90 bp | CAGATGCACAGCACTCCCCAGGCCAGCCTGAAGGGCACCTTGCCCACTGTCTCAGTCTGGACCAGGTGTTaGTTACGCTCACATTCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: QMHSTPQASLKGTLPTVSVWTRC*LRSHSN Trigger: GTTAGAATGTGAGCGTAATCAACACCTGGTCCAGAC...TGAGACAGTGGGCAAGGTGCCCTTCAGGCTGGCCTGGGGAGTGCTGTGCATCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030944.11 ENSMUST00000126346.2 |
||
| CDS-3UTR TCA 90 bp | CCCTGGCATATAGCTAAACTGGCAGTGCACAGTTGCACACAAATATCCCACCAGTCGACATGGACGGCGTaGAGCGGAGCTTGTCGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: PWHIAKLAVHSCTQISHQSTWTA*SGACRR Trigger: CCGACGACAAGCTCCGCTTCACGCCGTCCATGTCGA...CTGGTGGGATATTTGTGTGCAACTGTGCACTGCCAGTTTAGCTATATGCCAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
||
| CDS-3UTR TCA 90 bp | CACCAGGCCTGGGTCCCACAGCCAAATCCCAGGCATACACTCAAAGAAACAACCTCACGACTCCTGCTTTaGCTTCGACTCTCCTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: HQAWVPQPNPRHTLKETTSRLLL*LRLSCP Trigger: AGGGCAGGAGAGTCGAAGTCAAAGCAGGAGTCGTGA...GGTTGTTTCTTTGAGTGTATGCCTGGGATTTGGCTGTGGGACCCAGGCCTGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
||
| CDS-3UTR GCA 90 bp | CCCTGGCATATAGCTAAACTGGCAGTGCACAGTTGCACACAAATATCCCACCAGCGCTGGAACAGCACCTaGCCTGTAGCCATGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: PWHIAKLAVHSCTQISHQRWNST*PVAMAT Trigger: GGTGGCCATGGCTACAGGGCAGGTGCTGTTCCAGCG...CTGGTGGGATATTTGTGTGCAACTGTGCACTGCCAGTTTAGCTATATGCCAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
||
| CDS-3UTR CCA 90 bp | TCATGCTACAAGGCCACTGACGCCAAGGTGTGCCCAACAGGGAGGGACCAAGGGTCCTTTACCTTCTTTTaGGGATTCCAGCTTGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SCYKATDAKVCPTGRDQGSFTFF*GFQLGS Trigger: GCTCCCAAGCTGGAATCCCCAAAAGAAGGTAAAGGA...CCCTTGGTCCCTCCCTGTTGGGCACACCTTGGCGTCAGTGGCCTTGTAGCATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
||
| CDS-3UTR TCA 90 bp | CTGGATTGGCTGAAGACGGCCGCTGTCCCTGCACCAAAGCACTTGGACAGCAGAGTCTGGACCAGGTGTTaGTTACGCTCACATTCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: LDWLKTAAVPAPKHLDSRVWTRC*LRSHSN Trigger: GTTAGAATGTGAGCGTAATCAACACCTGGTCCAGAC...TCTGCTGTCCAAGTGCTTTGGTGCAGGGACAGCGGCCGTCTTCAGCCAATCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
||
| CDS-3UTR CCA 90 bp | AATGAGAACAGGGAGCAAGGACCAGGGCATATACAGCTCCTACAGCCCCTGGCAGACTTGTGTGGCTTCTaGGTGAGGTACTTGCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: NENREQGPGHIQLLQPLADLCGF*VRYLQS Trigger: GGACTGCAAGTACCTCACCCAGAAGCCACACAAGTC...TGCCAGGGGCTGTAGGAGCTGTATATGCCCTGGTCCTTGCTCCCTGTTCTCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
||
| 3UTR CAA 72 bp | TCCTTCTCTTTGGAGAAGCGGACCGTGATGGGGACCTaGAGTAGCTCTGCTCACGACTCCTGCTTTGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: SFSLEKRTVMGT*SSSAHDSCFDF Trigger: GAAGTCAAAGCAGGAGTCGTGAGCAGAGCTACTCAAGGTCCCCATCACGGTCCGCTTCTCCAAAGAGAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
||
| CDS-3UTR TCA 90 bp | CAGATGCACAGCACTCCCCAGGCCAGCCTGAAGGGCACCTTGCCCACTGTCTCATCACATTCTAACACCTaGAGGTACATAACGATTATC | + |
|
Preference number: 4 (lower is better) Translates to: QMHSTPQASLKGTLPTVSSHSNT*RYITII Trigger: GATAATCGTTATGTACCTTCAGGTGTTAGAATGTGA...TGAGACAGTGGGCAAGGTGCCCTTCAGGCTGGCCTGGGGAGTGCTGTGCATCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030944.11 ENSMUST00000126346.2 |
||
| CDS-3UTR CCA 90 bp | CACCTTGCCCACTGTCTCATCAATCAAATTCACCTCAAGGTCCAATTAAAAACAGCCTGGCGCAGTCCCTaGGAGCAGGCCCTTTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: HLAHCLINQIHLKVQLKTAWRSP*EQALCS Trigger: CGAGCAAAGGGCCTGCTCCCAGGGACTGCGCCAGGC...TGTTTTTAATTGGACCTTGAGGTGAATTTGATTGATGAGACAGTGGGCAAGGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
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| CDS-3UTR CCA 90 bp | AGGGCACCTTGCCCACTGTCTCATCAATCAAATTCACCTCAAGGTCCAATTAAAACAGGGCTGTGGCCCTaGGCTTTCTTTGGGCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: RAPCPLSHQSNSPQGPIKTGLWP*AFFGPS Trigger: GGAAGGCCCAAAGAAAGCCCAGGGCCACAGCCCTGT...TTTAATTGGACCTTGAGGTGAATTTGATTGATGAGACAGTGGGCAAGGTGCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
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| CDS-3UTR CCA 90 bp | CCCTGGCATATAGCTAAACTGGCAGTGCACAGTTGCACACAAATATCCCACCAGGCCCTGGGCTTTCTTTaGGCCTTCCATTTTCCGTTT | + |
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Preference number: 4 (lower is better) Translates to: PWHIAKLAVHSCTQISHQALGFL*AFHFPF Trigger: AAACGGAAAATGGAAGGCCCAAAGAAAGCCCAGGGC...CTGGTGGGATATTTGTGTGCAACTGTGCACTGCCAGTTTAGCTATATGCCAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
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| CDS-3UTR TCA 90 bp | TGGCATATAGCTAAACTGGCAGTGCACAGTTGCACACAAATATCCCACCAGGCCATTTTGGAAGCCAGGTaGACACAAGCCATGGACACA | + |
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Preference number: 4 (lower is better) Translates to: WHIAKLAVHSCTQISHQAILEAR*TQAMDT Trigger: TGTGTCCATGGCTTGTGTTCACCTGGCTTCCAAAAT...GGCCTGGTGGGATATTTGTGTGCAACTGTGCACTGCCAGTTTAGCTATATGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
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| CDS-3UTR TCA 90 bp | CACCTTGCCCACTGTCTCATCAATCAAATTCACCTCAAGGTCCAATTAAAAACAGGAGCCCCTCACTTCTaGGCCTTTGTAGGGAGCACC | + |
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Preference number: 4 (lower is better) Translates to: HLAHCLINQIHLKVQLKTGAPHF*AFVGST Trigger: GGTGCTCCCTACAAAGGCTCAGAAGTGAGGGGCTCC...TGTTTTTAATTGGACCTTGAGGTGAATTTGATTGATGAGACAGTGGGCAAGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
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| CDS-3UTR GCA 90 bp | TGGCATATAGCTAAACTGGCAGTGCACAGTTGCACACAAATATCCCACCAGGCCCAAGCCATGGACACATaGTCCATGGAATGTTTCACG | + |
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Preference number: 4 (lower is better) Translates to: WHIAKLAVHSCTQISHQAQAMDT*SMECFT Trigger: CGTGAAACATTCCATGGAGCATGTGTCCATGGCTTG...GGCCTGGTGGGATATTTGTGTGCAACTGTGCACTGCCAGTTTAGCTATATGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
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| CDS-3UTR GCA 90 bp | CACCAGGCCTGGGTCCCACAGCCAAATCCCAGGCATACACTCAAAGAAACAACCACTTCACTCTCCAGATaGGTCAAATCAACCTTTTTC | + |
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Preference number: 4 (lower is better) Translates to: HQAWVPQPNPRHTLKETTTSLSR*VKSTFF Trigger: GAAAAAGGTTGATTTGACGCATCTGGAGAGTGAAGT...GGTTGTTTCTTTGAGTGTATGCCTGGGATTTGGCTGTGGGACCCAGGCCTGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
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| CDS-3UTR TCA 90 bp | AGGGCACCTTGCCCACTGTCTCATCAATCAAATTCACCTCAAGGTCCAATTAAAAAAAGCCCAACTCCTTaGGAACCCGTCTCTCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: RAPCPLSHQSNSPQGPIKKSPTP*EPVSLP Trigger: AGGCAGAGAGACGGGTTCTCAAGGAGTTGGGCTTTT...TTTAATTGGACCTTGAGGTGAATTTGATTGATGAGACAGTGGGCAAGGTGCCCT 48% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000030944.11 ENSMUST00000126346.2 |
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| CDS-3UTR GCA 90 bp | CTCATTGTGAACCACTGCAAAATATGTACACAAGTACAACCTAATATAGGCAAAGTAGCCATGGCCACCTaGGGCAGGCGGAGCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LIVNHCKICTQVQPNIGKVAMAT*GRRSRM Trigger: CATCCTGCTCCGCCTGCCGCAGGTGGCCATGGCTAC...TTTGCCTATATTAGGTTGTACTTGTGTACATATTTTGCAGTGGTTCACAATGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
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| CDS-3UTR CCA 90 bp | TGGCATATAGCTAAACTGGCAGTGCACAGTTGCACACAAATATCCCACCAGGCCCCTTTGCTTCTTCAATaGCGTGCTTTCTCTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: WHIAKLAVHSCTQISHQAPLLLQ*RAFSSP Trigger: TGGAGAAGAGAAAGCACGCCATTGAAGAAGCAAAGG...GGCCTGGTGGGATATTTGTGTGCAACTGTGCACTGCCAGTTTAGCTATATGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
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| CDS-3UTR TCA 90 bp | AAGAGACAGCTTGTCAATAGCACCAAGCCACGCCAATGGGGACGTGTGCCTTTGTCACATTCTAACACCTaGAGGTACATAACGATTATC | + |
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Preference number: 4 (lower is better) Translates to: KRQLVNSTKPRQWGRVPLSHSNT*RYITII Trigger: GATAATCGTTATGTACCTTCAGGTGTTAGAATGTGA...CAAAGGCACACGTCCCCATTGGCGTGGCTTGGTGCTATTGACAAGCTGTCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030944.11 ENSMUST00000126346.2 |
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| CDS-3UTR GCA 90 bp | CCCTGGCATATAGCTAAACTGGCAGTGCACAGTTGCACACAAATATCCCACCAGTTTTTCTCTCTCAGATaGCGAAGGCGATGGAATACA | + |
|
Preference number: 4 (lower is better) Translates to: PWHIAKLAVHSCTQISHQFFSLR*RRRWNT Trigger: TGTATTCCATCGCCTTCGGCATCTGAGAGAGAAAAA...CTGGTGGGATATTTGTGTGCAACTGTGCACTGCCAGTTTAGCTATATGCCAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
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| CDS-3UTR CCA 90 bp | AGGGCACCTTGCCCACTGTCTCATCAATCAAATTCACCTCAAGGTCCAATTAAAGCTACGAGACTTGTGTaGCTTCTGGGTGAGGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: RAPCPLSHQSNSPQGPIKATRLV*LLGEVL Trigger: AAGTACCTCACCCAGAAGCCACACAAGTCTCGTAGC...TTTAATTGGACCTTGAGGTGAATTTGATTGATGAGACAGTGGGCAAGGTGCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
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| CDS-3UTR TCA 90 bp | TCACCTCAAGGTCCAATTAAAAACACTTTCGAAAAACATCATGCTACAAGGCCAGTACTTGCAGTCCTTTaGTTTCCGGGAGCCCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SPQGPIKNTFEKHHATRPVLAVL*FPGAPH Trigger: GTGAGGGGCTCCCGGAAATCAAAGGACTGCAAGTAC...TGGCCTTGTAGCATGATGTTTTTCGAAAGTGTTTTTAATTGGACCTTGAGGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
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| CDS-3UTR GCA 90 bp | TGCTTCTTCAATGGCGTGCTTTCTCTTCTCCACTTCACTCTCCAGATGCGTCAATTTTTCTCTCTCAGATaGCGAAGGCGATGGAATACA | + |
|
Preference number: 4 (lower is better) Translates to: CFFNGVLSLLHFTLQMRQFFSLR*RRRWNT Trigger: TGTATTCCATCGCCTTCGGCATCTGAGAGAGAAAAA...TTGACGCATCTGGAGAGTGAAGTGGAGAAGAGAAAGCACGCCATTGAAGAAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126346.2 |
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| CDS-3UTR GCA 90 bp | AACAAGTGTCCTGAGAATTGTTTATTCAACCACGTAAAATTTCTCTCCAGCTGGGCACCTCGGTGTACCTaGCTTGGAGGAGAGTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: NKCPENCLFNHVKFLSSWAPRCT*LGGESL Trigger: AAGTGACTCTCCTCCAAGGCAGGTACACCGAGGTGC...CCAGCTGGAGAGAAATTTTACGTGGTTGAATAAACAATTCTCAGGACACTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
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| CDS-3UTR GCA 90 bp | CACCTTGCCCACTGTCTCATCAATCAAATTCACCTCAAGGTCCAATTAAAAACACATAGCGATGGCCTGTaGGCTCATATGACCTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HLAHCLINQIHLKVQLKTHSDGL*AHMTLS Trigger: GCTCAAGGTCATATGAGCGCACAGGCCATCGCTATG...TGTTTTTAATTGGACCTTGAGGTGAATTTGATTGATGAGACAGTGGGCAAGGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
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| CDS-3UTR TCA 90 bp | AACAAGTGTCCTGAGAATTGTTTATTCAACCACGTAAAATTTCTCTCCAGCTGGTGTGTGGCTTCTGGGTaGGGTACTTGCAGTCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: NKCPENCLFNHVKFLSSWCVASG*GTCSPL Trigger: CAAAGGACTGCAAGTACCTCACCCAGAAGCCACACA...CCAGCTGGAGAGAAATTTTACGTGGTTGAATAAACAATTCTCAGGACACTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
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| CDS-3UTR TCA 90 bp | CACCTTGCCCACTGTCTCATCAATCAAATTCACCTCAAGGTCCAATTAAAAACAAGGTTAACATACTCTTaGTCAAGCACCAGAGGCACG | + |
|
Preference number: 4 (lower is better) Translates to: HLAHCLINQIHLKVQLKTRLTYS*SSTRGT Trigger: CGTGCCTCTGGTGCTTGATCAAGAGTATGTTAACCT...TGTTTTTAATTGGACCTTGAGGTGAATTTGATTGATGAGACAGTGGGCAAGGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030944.11 ENSMUST00000126346.2 |
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| CDS-3UTR CCA 90 bp | TCACCTCAAGGTCCAATTAAAAACACTTTCGAAAAACATCATGCTACAAGGCCAGGTGAACACAAGCCATaGACACATGCTCCATGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SPQGPIKNTFEKHHATRPGEHKP*THAPWN Trigger: ATTCCATGGAGCATGTGTCCATGGCTTGTGTTCACC...TGGCCTTGTAGCATGATGTTTTTCGAAAGTGTTTTTAATTGGACCTTGAGGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
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| CDS-3UTR CCA 90 bp | AACAAGTGTCCTGAGAATTGTTTATTCAACCACGTAAAATTTCTCTCCAGCTGGTGGACACATGCTCCATaGAATGTTTCACGAAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: NKCPENCLFNHVKFLSSWWTHAP*NVSRRT Trigger: AGTCCTTCGTGAAACATTCCATGGAGCATGTGTCCA...CCAGCTGGAGAGAAATTTTACGTGGTTGAATAAACAATTCTCAGGACACTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
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| CDS-3UTR GCA 90 bp | CTCATTGTGAACCACTGCAAAATATGTACACAAGTACAACCTAATATAGGCAAAGCTTCTTCAATGGCGTaGTTTCTCTTCTCCACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LIVNHCKICTQVQPNIGKASSMA*FLFSTS Trigger: TGAAGTGGAGAAGAGAAAGCACGCCATTGAAGAAGC...TTTGCCTATATTAGGTTGTACTTGTGTACATATTTTGCAGTGGTTCACAATGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
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| CDS-3UTR CAA 90 bp | CAGATGCACAGCACTCCCCAGGCCAGCCTGAAGGGCACCTTGCCCACTGTCTCAGGCCCTGGGCTTTCTTaGGGCCTTCCATTTTCCGTT | + |
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Preference number: 5 (lower is better) Translates to: QMHSTPQASLKGTLPTVSGPGLS*GLPFSV Trigger: AACGGAAAATGGAAGGCCCAAAGAAAGCCCAGGGCC...TGAGACAGTGGGCAAGGTGCCCTTCAGGCTGGCCTGGGGAGTGCTGTGCATCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
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| CDS-3UTR CAA 90 bp | TCATGCTACAAGGCCACTGACGCCAAGGTGTGCCCAACAGGGAGGGACCAAGGGCTCACGACTCCTGCTTaGACTTCGACTCTCCTGCCC | + |
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Preference number: 5 (lower is better) Translates to: SCYKATDAKVCPTGRDQGLTTPA*TSTLLP Trigger: GGGCAGGAGAGTCGAAGTCAAAGCAGGAGTCGTGAG...CCCTTGGTCCCTCCCTGTTGGGCACACCTTGGCGTCAGTGGCCTTGTAGCATGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
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| CDS-3UTR CAA 90 bp | CAGATGCACAGCACTCCCCAGGCCAGCCTGAAGGGCACCTTGCCCACTGTCTCAGAACGACTCTGTGACTaGGACCCACCTGAGGTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: QMHSTPQASLKGTLPTVSERLCD*DPPEVE Trigger: CTCTACCTCAGGTGGGTCCAAGTCACAGAGTCGTTC...TGAGACAGTGGGCAAGGTGCCCTTCAGGCTGGCCTGGGGAGTGCTGTGCATCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
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| CDS-3UTR CAA 90 bp | AAGAGACAGCTTGTCAATAGCACCAAGCCACGCCAATGGGGACGTGTGCCTTTGTTTGGGGATTCCAGCTaGGGAGCAGGCGAGAACCCC | + |
|
Preference number: 5 (lower is better) Translates to: KRQLVNSTKPRQWGRVPLFGDSS*GAGENP Trigger: GGGGTTCTCGCCTGCTCCCAAGCTGGAATCCCCAAA...CAAAGGCACACGTCCCCATTGGCGTGGCTTGGTGCTATTGACAAGCTGTCTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
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| CDS-3UTR CAA 90 bp | CAGATGCACAGCACTCCCCAGGCCAGCCTGAAGGGCACCTTGCCCACTGTCTCAAGGCGATGGAATACATaGATGACATCCCTGATTCGT | + |
|
Preference number: 5 (lower is better) Translates to: QMHSTPQASLKGTLPTVSRRWNT*MTSLIR Trigger: ACGAATCAGGGATGTCATCAATGTATTCCATCGCCT...TGAGACAGTGGGCAAGGTGCCCTTCAGGCTGGCCTGGGGAGTGCTGTGCATCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030944.11 ENSMUST00000126346.2 |
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| CDS-3UTR CAA 90 bp | AAGAGACAGCTTGTCAATAGCACCAAGCCACGCCAATGGGGACGTGTGCCTTTGACCGTGATGGGGACCTaGAGTAGCTCTGCTCACGAC | + |
|
Preference number: 5 (lower is better) Translates to: KRQLVNSTKPRQWGRVPLTVMGT*SSSAHD Trigger: GTCGTGAGCAGAGCTACTCAAGGTCCCCATCACGGT...CAAAGGCACACGTCCCCATTGGCGTGGCTTGGTGCTATTGACAAGCTGTCTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
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| CDS-3UTR CAA 90 bp | AATGAGAACAGGGAGCAAGGACCAGGGCATATACAGCTCCTACAGCCCCTGGCACTCCTTTACCTTCTTTaGGGGATTCCAGCTTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: NENREQGPGHIQLLQPLALLYLL*GIPAWE Trigger: CTCCCAAGCTGGAATCCCCAAAAGAAGGTAAAGGAG...TGCCAGGGGCTGTAGGAGCTGTATATGCCCTGGTCCTTGCTCCCTGTTCTCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
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| CDS-3UTR CAA 90 bp | AAGAGACAGCTTGTCAATAGCACCAAGCCACGCCAATGGGGACGTGTGCCTTTGCACTTTTCCTTCTCTTaGGAGAAGCGGACCGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: KRQLVNSTKPRQWGRVPLHFSFS*EKRTVM Trigger: CATCACGGTCCGCTTCTCCAAAGAGAAGGAAAAGTG...CAAAGGCACACGTCCCCATTGGCGTGGCTTGGTGCTATTGACAAGCTGTCTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
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| CDS-3UTR CAA 90 bp | CAGCCAAATCCCAGGCATACACTCAAAGAAACAACCAGAATGACAGCCCACAAAGAGGGCGGGGAAGGCTaGCCTCCTTTACCTTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: QPNPRHTLKETTRMTAHKEGGEG*PPLPSF Trigger: AAAAGAAGGTAAAGGAGGCAAGCCTTCCCCGCCCTC...TTTGTGGGCTGTCATTCTGGTTGTTTCTTTGAGTGTATGCCTGGGATTTGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
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| CDS-3UTR CAA 90 bp | AGGGCACCTTGCCCACTGTCTCATCAATCAAATTCACCTCAAGGTCCAATTAAACCTTCCATTTTCCGTTaGGCGCTCTTTCCAGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RAPCPLSHQSNSPQGPIKPSIFR*ALFPEG Trigger: GCCCTCTGGAAAGAGCGCCAAACGGAAAATGGAAGG...TTTAATTGGACCTTGAGGTGAATTTGATTGATGAGACAGTGGGCAAGGTGCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
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| CDS-3UTR CAA 90 bp | CCCTGGCATATAGCTAAACTGGCAGTGCACAGTTGCACACAAATATCCCACCAGAGGCGATGGAATACATaGATGACATCCCTGATTCGT | + |
|
Preference number: 5 (lower is better) Translates to: PWHIAKLAVHSCTQISHQRRWNT*MTSLIR Trigger: ACGAATCAGGGATGTCATCAATGTATTCCATCGCCT...CTGGTGGGATATTTGTGTGCAACTGTGCACTGCCAGTTTAGCTATATGCCAGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
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| CDS-3UTR CAA 90 bp | CACCTTGCCCACTGTCTCATCAATCAAATTCACCTCAAGGTCCAATTAAAAACAGGTACTTGCAGTCCTTaGATTTCCGGGAGCCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: HLAHCLINQIHLKVQLKTGTCSP*ISGSPS Trigger: TGAGGGGCTCCCGGAAATCAAAGGACTGCAAGTACC...TGTTTTTAATTGGACCTTGAGGTGAATTTGATTGATGAGACAGTGGGCAAGGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
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| CDS-3UTR CAA 90 bp | CTCATTGTGAACCACTGCAAAATATGTACACAAGTACAACCTAATATAGGCAAACTCCGGCTACGAGACTaGTGTGGCTTCTGGGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LIVNHCKICTQVQPNIGKLRLRD*CGFWVR Trigger: CCTCACCCAGAAGCCACACAAGTCTCGTAGCCGGAG...TTTGCCTATATTAGGTTGTACTTGTGTACATATTTTGCAGTGGTTCACAATGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
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| CDS-3UTR CAA 90 bp | TGGCATATAGCTAAACTGGCAGTGCACAGTTGCACACAAATATCCCACCAGGCCGAATTTCTTCTTCAGTaGCTCCAAACAAAAGAAACC | + |
|
Preference number: 5 (lower is better) Translates to: WHIAKLAVHSCTQISHQAEFLLQ*LQTKET Trigger: GGTTTCTTTTGTTTGGAGCAACTGAAGAAGAAATTC...GGCCTGGTGGGATATTTGTGTGCAACTGTGCACTGCCAGTTTAGCTATATGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
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| CDS-3UTR CAA 90 bp | TCACCTCAAGGTCCAATTAAAAACACTTTCGAAAAACATCATGCTACAAGGCCATTGTATTTTCCAGAATaGTCCGTCCGCTCTCGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: SPQGPIKNTFEKHHATRPLYFPE*SVRSRD Trigger: GTCACGAGAGCGGACGGACAATTCTGGAAAATACAA...TGGCCTTGTAGCATGATGTTTTTCGAAAGTGTTTTTAATTGGACCTTGAGGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
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| CDS TCA 72 bp | CCGTATCGACGTCGAGGCCGCTCGACATGGACGGCGTaGAGCGGAGCTTGTCGTCGGGCAGCAGGCAGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: PYRRRGRSTWTA*SGACRRAAGSF Trigger: AAAACTGCCTGCTGCCCGACGACAAGCTCCGCTTCACGCCGTCCATGTCGAGCGGCCTCGACGTCGATACGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
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| CDS CAA 90 bp | GTATCGACGTCGAGGCCGCTCGACATGGACGGCGTGAAGCGGAGCTaGTCGTCGGGCAGCAGGCAGTTTTCCAAGGTGATGAGCACGCCC | + |
|
Preference number: 6 (lower is better) Translates to: VSTSRPLDMDGVKRS*SSGSRQFSKVMSTP Trigger: GGGCGTGCTCATCACCTTGGAAAACTGCCTGCTGCCCGACGACAAGCTCCGCTTCACGCCGTCCATGTCGAGCGGCCTCGACGTCGATAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
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| CDS CAA 72 bp | TCGAGGCCGCTCGACATGGACGGCGTGAAGCGGAGCTaGTCGTCGGGCAGCAGGCAGTTTTCCAAGGTGATG | + |
|
Preference number: 6 (lower is better) Translates to: SRPLDMDGVKRS*SSGSRQFSKVM Trigger: CATCACCTTGGAAAACTGCCTGCTGCCCGACGACAAGCTCCGCTTCACGCCGTCCATGTCGAGCGGCCTCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030944.11 |
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| CDS CAA 72 bp | TTTTTCTCTCTCAGATGCCGAAGGCGATGGAATACATaGATGACATCCCTGATTCGTCTCGGAGCCTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: FFSLRCRRRWNT*MTSLIRLGASS Trigger: AGAAGAGGCTCCGAGACGAATCAGGGATGTCATCAATGTATTCCATCGCCTTCGGCATCTGAGAGAGAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030944.11 ENSMUST00000126346.2 |
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