Pregenerated sensors for CCNL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027829Ensembl transcript IDs: ENSMUST00000029416.14, ENSMUST00000129002.8, ENSMUST00000135719.8, ENSMUST00000144810.8, ENSMUST00000145186.8, ENSMUST00000154585.8
Found 234 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCGCCTATGCCTGCCATGTCCTGAGCGACTGCCACCATGGTGCTTaGCTTTATGGGACCTCTCAAAGGAGCGAGATCGTTCACGCCTGT | + |
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Preference number: 1 (lower is better) Translates to: SAYACHVLSDCHHGA*LYGTSQRSEIVHAC Trigger: ACAGGCGTGAACGATCTCGCTCCTTTGAGAGGTCCCATAAAGGCAAGCACCATGGTGGCAGTCGCTCAGGACATGGCAGGCATAGGCGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
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| 3UTR GCA 90 bp | AGTCAGCGCCTATGCCTGCCATGTCCTGAGCGACTGCCACCATGGTaGTTGCCTTTATGGGACCTCTCAAAGGAGCGAGATCGTTCACGC | + |
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Preference number: 1 (lower is better) Translates to: SQRLCLPCPERLPPW*LPLWDLSKERDRSR Trigger: GCGTGAACGATCTCGCTCCTTTGAGAGGTCCCATAAAGGCAAGCACCATGGTGGCAGTCGCTCAGGACATGGCAGGCATAGGCGCTGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
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| 3UTR GCA 90 bp | CAGGAACCGCTGCAGTGTCAGAGGATGAAAGTCAGCGCCTATGCCTaGCATGTCCTGAGCGACTGCCACCATGGTGCTTGCCTTTATGGG | + |
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Preference number: 1 (lower is better) Translates to: QEPLQCQRMKVSAYA*HVLSDCHHGACLYG Trigger: CCCATAAAGGCAAGCACCATGGTGGCAGTCGCTCAGGACATGGCAGGCATAGGCGCTGACTTTCATCCTCTGACACTGCAGCGGTTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
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| 3UTR GCA 90 bp | CAGAGGATGAAAGTCAGCGCCTATGCCTGCCATGTCCTGAGCGACTaGCACCATGGTGCTTGCCTTTATGGGACCTCTCAAAGGAGCGAG | + |
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Preference number: 1 (lower is better) Translates to: QRMKVSAYACHVLSD*HHGACLYGTSQRSE Trigger: CTCGCTCCTTTGAGAGGTCCCATAAAGGCAAGCACCATGGTGGCAGTCGCTCAGGACATGGCAGGCATAGGCGCTGACTTTCATCCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
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| 3UTR GCA 90 bp | ACACCAGGAACCGCTGCAGTGTCAGAGGATGAAAGTCAGCGCCTATaGCTGCCATGTCCTGAGCGACTGCCACCATGGTGCTTGCCTTTA | + |
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Preference number: 1 (lower is better) Translates to: TPGTAAVSEDESQRL*LPCPERLPPWCLPL Trigger: TAAAGGCAAGCACCATGGTGGCAGTCGCTCAGGACATGGCAGGCATAGGCGCTGACTTTCATCCTCTGACACTGCAGCGGTTCCTGGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
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| 3UTR TCA 90 bp | GAAGACGCTGCCAGATGGGTATGGACCACTTCAGTGAATCTCGGATaGGAGCTTGCACTGGACTGGCTGGAGAGCAGGCTAGCCAATCAG | + |
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Preference number: 1 (lower is better) Translates to: EDAARWVWTTSVNLG*ELALDWLESRLANQ Trigger: CTGATTGGCTAGCCTGCTCTCCAGCCAGTCCAGTGCAAGCTCTCATCCGAGATTCACTGAAGTGGTCCATACCCATCTGGCAGCGTCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000145186.8 ENSMUST00000154585.8 |
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| 3UTR GCA 90 bp | TGCCAGATGGGTATGGACCACTTCAGTGAATCTCGGATGAGAGCTTaGACTGGACTGGCTGGAGAGCAGGCTAGCCAATCAGGCCATCCT | + |
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Preference number: 1 (lower is better) Translates to: CQMGMDHFSESRMRA*TGLAGEQASQSGHP Trigger: AGGATGGCCTGATTGGCTAGCCTGCTCTCCAGCCAGTCCAGTGCAAGCTCTCATCCGAGATTCACTGAAGTGGTCCATACCCATCTGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000145186.8 ENSMUST00000154585.8 |
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| 3UTR CCA 90 bp | GAAAGTCAGCGCCTATGCCTGCCATGTCCTGAGCGACTGCCACCATaGTGCTTGCCTTTATGGGACCTCTCAAAGGAGCGAGATCGTTCA | + |
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Preference number: 1 (lower is better) Translates to: ESQRLCLPCPERLPP*CLPLWDLSKERDRS Trigger: TGAACGATCTCGCTCCTTTGAGAGGTCCCATAAAGGCAAGCACCATGGTGGCAGTCGCTCAGGACATGGCAGGCATAGGCGCTGACTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
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| 3UTR TCA 90 bp | TCTGATCAAGGATCAGGGGGCTTGGAGTCCTGTAATATTGAGCCATaGGTAGTGGCTCACCTCATAATCCCAGCACTTTGCAGGGGTTGG | + |
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Preference number: 1 (lower is better) Translates to: SDQGSGGLESCNIEP*VVAHLIIPALCRGW Trigger: CCAACCCCTGCAAAGTGCTGGGATTATGAGGTGAGCCACTACTCATGGCTCAATATTACAGGACTCCAAGCCCCCTGATCCTTGATCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144810.8 |
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| 3UTR CCA 90 bp | GGAGTCCTGTTAGTCCCCGATTCCAGTGACCTATTCTCAGAACACTaGCTTCTCCTTGGGGATTTCGATACTTCACTCACTGTTGCCATG | + |
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Preference number: 1 (lower is better) Translates to: GVLLVPDSSDLFSEH*LLLGDFDTSLTVAM Trigger: CATGGCAACAGTGAGTGAAGTATCGAAATCCCCAAGGAGAAGCCAGTGTTCTGAGAATAGGTCACTGGAATCGGGGACTAACAGGACTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129002.8 |
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| 3UTR TCA 90 bp | GTCTCTGTGATGTCCCCTTTCGTGCCTGTGTTTCTTGGTAACATCTaGGTGATCCCGAGTCTTGCTCTGAGATCGAGACCGAGACTTTTT | + |
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Preference number: 1 (lower is better) Translates to: VSVMSPFVPVFLGNI*VIPSLALRSRPRLF Trigger: AAAAAGTCTCGGTCTCGATCTCAGAGCAAGACTCGGGATCACTCAGATGTTACCAAGAAACACAGGCACGAAAGGGGACATCACAGAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
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| 3UTR GCA 90 bp | GAGGAGAACCATGATTATGATGTCTTCGAGGGCTTTCACTGTGACTaGGAGACCTGCTTCTTGATCTTGAGCTGTATGTTCCAGATCGAC | + |
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Preference number: 1 (lower is better) Translates to: EENHDYDVFEGFHCD*ETCFLILSCMFQID Trigger: GTCGATCTGGAACATACAGCTCAAGATCAAGAAGCAGGTCTCGCAGTCACAGTGAAAGCCCTCGAAGACATCATAATCATGGTTCTCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
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| 3UTR GCA 90 bp | CATGATTATGATGTCTTCGAGGGCTTTCACTGTGACTGCGAGACCTaGTTCTTGATCTTGAGCTGTATGTTCCAGATCGACTTCGCCTAT | + |
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Preference number: 1 (lower is better) Translates to: HDYDVFEGFHCDCET*FLILSCMFQIDFAY Trigger: ATAGGCGAAGTCGATCTGGAACATACAGCTCAAGATCAAGAAGCAGGTCTCGCAGTCACAGTGAAAGCCCTCGAAGACATCATAATCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
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| 3UTR GCA 90 bp | CAAGGGAATTTGAAGTGCTCTAGCTGCAAGGTAGATACAAGCACATaGTATAGTCTCTGGTTGAAAGCGAACAAAGACATTGGTTCGAAG | + |
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Preference number: 1 (lower is better) Translates to: QGNLKCSSCKVDTST*YSLWLKANKDIGSK Trigger: CTTCGAACCAATGTCTTTGTTCGCTTTCAACCAGAGACTATAGCATGTGCTTGTATCTACCTTGCAGCTAGAGCACTTCAAATTCCCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000144810.8 ENSMUST00000154585.8 |
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| 3UTR CCA 90 bp | AAGTGCTCTAGCTGCAAGGTAGATACAAGCACATGCTATAGTCTCTaGTTGAAAGCGAACAAAGACATTGGTTCGAAGACTGTCATTCAT | + |
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Preference number: 1 (lower is better) Translates to: KCSSCKVDTSTCYSL*LKANKDIGSKTVIH Trigger: ATGAATGACAGTCTTCGAACCAATGTCTTTGTTCGCTTTCAACCAGAGACTATAGCATGTGCTTGTATCTACCTTGCAGCTAGAGCACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000144810.8 ENSMUST00000154585.8 |
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| 3UTR TCA 90 bp | AAGACTGTCATTCATGTAATTCCATCATGGACTACCCAGGCAGTTTaGACCAGGGTTTGGTTACGTTCACATTCTAAGACTTGTAAATAC | + |
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Preference number: 1 (lower is better) Translates to: KTVIHVIPSWTTQAV*TRVWLRSHSKTCKY Trigger: GTATTTACAAGTCTTAGAATGTGAACGTAACCAAACCCTGGTTCAAACTGCCTGGGTAGTCCATGATGGAATTACATGAATGACAGTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144810.8 |
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| 3UTR CAA 90 bp | CAGCGCCTATGCCTGCCATGTCCTGAGCGACTGCCACCATGGTGCTaGCCTTTATGGGACCTCTCAAAGGAGCGAGATCGTTCACGCCTG | + |
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Preference number: 2 (lower is better) Translates to: QRLCLPCPERLPPWC*PLWDLSKERDRSRL Trigger: CAGGCGTGAACGATCTCGCTCCTTTGAGAGGTCCCATAAAGGCAAGCACCATGGTGGCAGTCGCTCAGGACATGGCAGGCATAGGCGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCGCCTATGCCTGCCATGTCCTGAGCGACTGCCACCATGGTGCTTGCCTTTATCACGCCTGTCTCTGTaGTGTCCCCTTTCGTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: QRLCLPCPERLPPWCLPLSRLSL*CPLSCL Trigger: CAGGCACGAAAGGGGACATCACAGAGACAGGCGTGA...TAAAGGCAAGCACCATGGTGGCAGTCGCTCAGGACATGGCAGGCATAGGCGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
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| 3UTR-3UTR CCA 90 bp | GCTGCAGTGTCAGAGGATGAAAGTCAGCGCCTATGCCTGCCATGTCCTGAGCGAAAGGATCAGGGGGCTTaGAGTCCTGTTAGTCCCCGA | + |
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Preference number: 2 (lower is better) Translates to: AAVSEDESQRLCLPCPERKDQGA*SPVSPR Trigger: TCGGGGACTAACAGGACTCCAAGCCCCCTGATCCTT...TCGCTCAGGACATGGCAGGCATAGGCGCTGACTTTCATCCTCTGACACTGCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129002.8 |
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| 3UTR-3UTR CCA 90 bp | GAGGATGAAAGTCAGCGCCTATGCCTGCCATGTCCTGAGCGACTGCCACCATGGTTGGGCTGTGTGATCTaGAACGGGACCTGGTTCTTG | + |
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Preference number: 2 (lower is better) Translates to: EDESQRLCLPCPERLPPWLGCVI*NGTWFL Trigger: CAAGAACCAGGTCCCGTTCCAGATCACACAGCCCAA...CCATGGTGGCAGTCGCTCAGGACATGGCAGGCATAGGCGCTGACTTTCATCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
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| 3UTR-3UTR TCA 90 bp | GGTATGGACCACTTCAGTGAATCTCGGATGAGAGCTTGCACTGGACTGGCTGGACCAATCAGGCCATCCTaGGGTCATGGGCTGAAGTGC | + |
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Preference number: 2 (lower is better) Translates to: GMDHFSESRMRACTGLAGPIRPS*GHGLKC Trigger: GCACTTCAGCCCATGACCTCAGGATGGCCTGATTGG...TCCAGCCAGTCCAGTGCAAGCTCTCATCCGAGATTCACTGAAGTGGTCCATACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000145186.8 ENSMUST00000154585.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGCAGTGTCAGAGGATGAAAGTCAGCGCCTATGCCTGCCATGTCCTGAGCGAAGTGATCCCGAGTCTTaGTCTGAGATCGAGACCGAG | + |
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Preference number: 2 (lower is better) Translates to: AAVSEDESQRLCLPCPERSDPES*SEIETE Trigger: CTCGGTCTCGATCTCAGAGCAAGACTCGGGATCACT...TCGCTCAGGACATGGCAGGCATAGGCGCTGACTTTCATCCTCTGACACTGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
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| 3UTR-3UTR GCA 90 bp | CCATGTCCTGAGCGACTGCCACCATGGTGCTTGCCTTTATGGGACCTCTCAAAGCGACTGCCACCATGGTaGTTGCCTTTATGGGACCTC | + |
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Preference number: 2 (lower is better) Translates to: PCPERLPPWCLPLWDLSKRLPPW*LPLWDL Trigger: GAGGTCCCATAAAGGCAAGCACCATGGTGGCAGTCG...CTTTGAGAGGTCCCATAAAGGCAAGCACCATGGTGGCAGTCGCTCAGGACATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCGCCTATGCCTGCCATGTCCTGAGCGACTGCCACCATGGTGCTTGCCTTTAAGAACTAGAAGACGCTaGCAGATGGGTATGGACCAC | + |
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Preference number: 2 (lower is better) Translates to: QRLCLPCPERLPPWCLPLRTRRR*QMGMDH Trigger: GTGGTCCATACCCATCTGGCAGCGTCTTCTAGTTCT...TAAAGGCAAGCACCATGGTGGCAGTCGCTCAGGACATGGCAGGCATAGGCGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154585.8 |
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| 3UTR-3UTR TCA 90 bp | GCCTATGCCTGCCATGTCCTGAGCGACTGCCACCATGGTGCTTGCCTTTATGGGTGGGGATGCTTGACATaGACACAAAATCCCAACTCC | + |
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Preference number: 2 (lower is better) Translates to: AYACHVLSDCHHGACLYGWGCLT*TQNPNS Trigger: GGAGTTGGGATTTTGTGTTCATGTCAAGCATCCCCA...CCCATAAAGGCAAGCACCATGGTGGCAGTCGCTCAGGACATGGCAGGCATAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCGCCTATGCCTGCCATGTCCTGAGCGACTGCCACCATGGTGCTTGCCTTTATGGAGTCTGTTGCCATaGCGACAGCTTCATCTCTAT | + |
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Preference number: 2 (lower is better) Translates to: QRLCLPCPERLPPWCLPLWSLLP*RQLHLY Trigger: ATAGAGATGAAGCTGTCGTCATGGCAACAGACTCCA...TAAAGGCAAGCACCATGGTGGCAGTCGCTCAGGACATGGCAGGCATAGGCGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135719.8 ENSMUST00000154585.8 |
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| 3UTR-3UTR TCA 90 bp | GACTGGCTGGAGAGCAGGCTAGCCAATCAGGCCATCCTGAGGTCATGGGCTGAAGAGGGCAGAGTTCTATaGCTTACCATCATGGACTAC | + |
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Preference number: 2 (lower is better) Translates to: DWLESRLANQAILRSWAEEGRVL*LTIMDY Trigger: GTAGTCCATGATGGTAAGTCATAGAACTCTGCCCTC...TTCAGCCCATGACCTCAGGATGGCCTGATTGGCTAGCCTGCTCTCCAGCCAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000145186.8 ENSMUST00000154585.8 |
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| 3UTR-3UTR TCA 90 bp | CCATGGTGCTTGCCTTTATGGGACCTCTCAAAGGAGCGAGATCGTTCACGCCTGTCAGTGAATCTCGGATaGGAGCTTGCACTGGACTGG | + |
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Preference number: 2 (lower is better) Translates to: PWCLPLWDLSKERDRSRLSVNLG*ELALDW Trigger: CCAGTCCAGTGCAAGCTCTCATCCGAGATTCACTGA...CAGGCGTGAACGATCTCGCTCCTTTGAGAGGTCCCATAAAGGCAAGCACCATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154585.8 |
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| 3UTR-3UTR TCA 90 bp | GCCTATGCCTGCCATGTCCTGAGCGACTGCCACCATGGTGCTTGCCTTTATGGGTATGGACCACTTCAGTaGATCTCGGATGAGAGCTTG | + |
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Preference number: 2 (lower is better) Translates to: AYACHVLSDCHHGACLYGYGPLQ*ISDESL Trigger: CAAGCTCTCATCCGAGATTCACTGAAGTGGTCCATA...CCCATAAAGGCAAGCACCATGGTGGCAGTCGCTCAGGACATGGCAGGCATAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154585.8 |
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| 3UTR-3UTR GCA 90 bp | GGAACCGCTGCAGTGTCAGAGGATGAAAGTCAGCGCCTATGCCTGCCATGTCCTTGCCACCATGGTGCTTaGCTTTATGGGACCTCTCAA | + |
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Preference number: 2 (lower is better) Translates to: GTAAVSEDESQRLCLPCPCHHGA*LYGTSQ Trigger: TTGAGAGGTCCCATAAAGGCAAGCACCATGGTGGCA...AGGACATGGCAGGCATAGGCGCTGACTTTCATCCTCTGACACTGCAGCGGTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
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| 3UTR-3UTR GCA 90 bp | CTTGCCTTTATGGGACCTCTCAAAGGAGCGAGATCGTTCACGCCTGTCTCTGTGCATGTCCTGAGCGACTaGCACCATGGTGCTTGCCTT | + |
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Preference number: 2 (lower is better) Translates to: LAFMGPLKGARSFTPVSVHVLSD*HHGACL Trigger: AAGGCAAGCACCATGGTGGCAGTCGCTCAGGACATG...CACAGAGACAGGCGTGAACGATCTCGCTCCTTTGAGAGGTCCCATAAAGGCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
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| 3UTR-3UTR GCA 90 bp | CCATGGTGCTTGCCTTTATGGGACCTCTCAAAGGAGCGAGATCGTTCACGCCTGGGGCTTGGAGTCTGTTaGCATGACGACAGCTTCATC | + |
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Preference number: 2 (lower is better) Translates to: PWCLPLWDLSKERDRSRLGLGVC*HDDSFI Trigger: GATGAAGCTGTCGTCATGGCAACAGACTCCAAGCCC...CAGGCGTGAACGATCTCGCTCCTTTGAGAGGTCCCATAAAGGCAAGCACCATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135719.8 ENSMUST00000154585.8 |
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| 3UTR-3UTR GCA 90 bp | CCTCTCAAAGGAGCGAGATCGTTCACGCCTGTCTCTGTGATGTCCCCTTTCGTGGGGCTTGGAGTCTGTTaGCATGACGACAGCTTCATC | + |
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Preference number: 2 (lower is better) Translates to: PLKGARSFTPVSVMSPFVGLGVC*HDDSFI Trigger: GATGAAGCTGTCGTCATGGCAACAGACTCCAAGCCC...CACGAAAGGGGACATCACAGAGACAGGCGTGAACGATCTCGCTCCTTTGAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135719.8 ENSMUST00000154585.8 |
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| 3UTR-3UTR CCA 90 bp | CCATGGTGCTTGCCTTTATGGGACCTCTCAAAGGAGCGAGATCGTTCACGCCTGTTGGGCTGTGTGATCTaGAACGGGACCTGGTTCTTG | + |
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Preference number: 2 (lower is better) Translates to: PWCLPLWDLSKERDRSRLLGCVI*NGTWFL Trigger: CAAGAACCAGGTCCCGTTCCAGATCACACAGCCCAA...CAGGCGTGAACGATCTCGCTCCTTTGAGAGGTCCCATAAAGGCAAGCACCATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
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| 3UTR-3UTR CCA 90 bp | CCCGACAGAACTAGAAGACGCTGCCAGATGGGTATGGACCACTTCAGTGAATCTGATGAGAGCTTGCACTaGACTGGCTGGAGAGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: PDRTRRRCQMGMDHFSESDESLH*TGWRAG Trigger: GCCTGCTCTCCAGCCAGTCCAGTGCAAGCTCTCATC...AGATTCACTGAAGTGGTCCATACCCATCTGGCAGCGTCTTCTAGTTCTGTCGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000145186.8 ENSMUST00000154585.8 |
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| 3UTR-3UTR TCA 90 bp | CCATGTCCTGAGCGACTGCCACCATGGTGCTTGCCTTTATGGGACCTCTCAAAGACTACCCAGGCAGTTTaGACCAGGGTTTGGTTACGT | + |
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Preference number: 2 (lower is better) Translates to: PCPERLPPWCLPLWDLSKTTQAV*TRVWLR Trigger: ACGTAACCAAACCCTGGTTCAAACTGCCTGGGTAGT...CTTTGAGAGGTCCCATAAAGGCAAGCACCATGGTGGCAGTCGCTCAGGACATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154585.8 |
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| 3UTR-3UTR GCA 90 bp | GAGGATGAAAGTCAGCGCCTATGCCTGCCATGTCCTGAGCGACTGCCACCATGGTACTTCACTCACTGTTaGCATGACGACAGCTTCATC | + |
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Preference number: 2 (lower is better) Translates to: EDESQRLCLPCPERLPPWYFTHC*HDDSFI Trigger: GATGAAGCTGTCGTCATGGCAACAGTGAGTGAAGTA...CCATGGTGGCAGTCGCTCAGGACATGGCAGGCATAGGCGCTGACTTTCATCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129002.8 |
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| 3UTR-3UTR GCA 90 bp | TGCCACCATGGTGCTTGCCTTTATGGGACCTCTCAAAGGAGCGAGATCGTTCACAGTGATCCCGAGTCTTaGTCTGAGATCGAGACCGAG | + |
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Preference number: 2 (lower is better) Translates to: CHHGACLYGTSQRSEIVHSDPES*SEIETE Trigger: CTCGGTCTCGATCTCAGAGCAAGACTCGGGATCACT...GTGAACGATCTCGCTCCTTTGAGAGGTCCCATAAAGGCAAGCACCATGGTGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
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| 3UTR-3UTR GCA 90 bp | GGTATGGACCACTTCAGTGAATCTCGGATGAGAGCTTGCACTGGACTGGCTGGAGGGCTTGGAGTCTGTTaGCATGACGACAGCTTCATC | + |
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Preference number: 2 (lower is better) Translates to: GMDHFSESRMRACTGLAGGLGVC*HDDSFI Trigger: GATGAAGCTGTCGTCATGGCAACAGACTCCAAGCCC...TCCAGCCAGTCCAGTGCAAGCTCTCATCCGAGATTCACTGAAGTGGTCCATACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000145186.8 ENSMUST00000154585.8 |
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| 3UTR-3UTR TCA 90 bp | CCATGGTGCTTGCCTTTATGGGACCTCTCAAAGGAGCGAGATCGTTCACGCCTGTGGGGATGCTTGACATaGACACAAAATCCCAACTCC | + |
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Preference number: 2 (lower is better) Translates to: PWCLPLWDLSKERDRSRLWGCLT*TQNPNS Trigger: GGAGTTGGGATTTTGTGTTCATGTCAAGCATCCCCA...CAGGCGTGAACGATCTCGCTCCTTTGAGAGGTCCCATAAAGGCAAGCACCATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
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| 3UTR-3UTR TCA 90 bp | CCATGGTGCTTGCCTTTATGGGACCTCTCAAAGGAGCGAGATCGTTCACGCCTGAAATCCACCAAGAGTTaGAAGGGCTGGAGTTCCATC | + |
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Preference number: 2 (lower is better) Translates to: PWCLPLWDLSKERDRSRLKSTKS*KGWSSI Trigger: GATGGAACTCCAGCCCTTTCAACTCTTGGTGGATTT...CAGGCGTGAACGATCTCGCTCCTTTGAGAGGTCCCATAAAGGCAAGCACCATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
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| 3UTR-3UTR CCA 90 bp | CTGAGTGATCCCGAGTCTTGCTCTGAGATCGAGACCGAGACTTTTTCCTCTTATGATGAGAGCTTGCACTaGACTGGCTGGAGAGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: LSDPESCSEIETETFSSYDESLH*TGWRAG Trigger: GCCTGCTCTCCAGCCAGTCCAGTGCAAGCTCTCATC...ATAAGAGGAAAAAGTCTCGGTCTCGATCTCAGAGCAAGACTCGGGATCACTCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154585.8 |
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| 3UTR-3UTR TCA 90 bp | TCAGAGGATGAAAGTCAGCGCCTATGCCTGCCATGTCCTGAGCGACTGCCACCATCTTATGGGGATGCTTaGCATGAACACAAAATCCCA | + |
|
Preference number: 2 (lower is better) Translates to: SEDESQRLCLPCPERLPPSYGDA*HEHKIP Trigger: TGGGATTTTGTGTTCATGTCAAGCATCCCCATAAGA...TGGTGGCAGTCGCTCAGGACATGGCAGGCATAGGCGCTGACTTTCATCCTCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR TCA 90 bp | ACTGCATATGGGCAACACCAGGAACCGCTGCAGTGTCAGAGGATGAAAGTCAGCAAATCCACCAAGAGTTaGAAGGGCTGGAGTTCCATC | + |
|
Preference number: 2 (lower is better) Translates to: TAYGQHQEPLQCQRMKVSKSTKS*KGWSSI Trigger: GATGGAACTCCAGCCCTTTCAACTCTTGGTGGATTT...GCTGACTTTCATCCTCTGACACTGCAGCGGTTCCTGGTGTTGCCCATATGCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR TCA 90 bp | CCATGTCCTGAGCGACTGCCACCATGGTGCTTGCCTTTATGGGACCTCTCAAAGTTTCTTGGTAACATCTaGGTGATCCCGAGTCTTGCT | + |
|
Preference number: 2 (lower is better) Translates to: PCPERLPPWCLPLWDLSKFLGNI*VIPSLA Trigger: AGCAAGACTCGGGATCACTCAGATGTTACCAAGAAA...CTTTGAGAGGTCCCATAAAGGCAAGCACCATGGTGGCAGTCGCTCAGGACATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR GCA 90 bp | TCAGAGGATGAAAGTCAGCGCCTATGCCTGCCATGTCCTGAGCGACTGCCACCACAAGGGAATTTGAAGTaGTCTAGCTGCAAGGTAGAT | + |
|
Preference number: 2 (lower is better) Translates to: SEDESQRLCLPCPERLPPQGNLK*SSCKVD Trigger: ATCTACCTTGCAGCTAGAGCACTTCAAATTCCCTTG...TGGTGGCAGTCGCTCAGGACATGGCAGGCATAGGCGCTGACTTTCATCCTCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR CCA 90 bp | TCAGAGGATGAAAGTCAGCGCCTATGCCTGCCATGTCCTGAGCGACTGCCACCAGAATCTCCTCTTCTGTaGTACCAAACAGAAGAAACC | + |
|
Preference number: 2 (lower is better) Translates to: SEDESQRLCLPCPERLPPESPLL*YQTEET Trigger: GGTTTCTTCTGTTTGGTACCACAGAAGAGGAGATTC...TGGTGGCAGTCGCTCAGGACATGGCAGGCATAGGCGCTGACTTTCATCCTCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR TCA 90 bp | GGGACCTCTCAAAGGAGCGAGATCGTTCACGCCTGTCTCTGTGATGTCCCCTTTTCTTATGGGGATGCTTaGCATGAACACAAAATCCCA | + |
|
Preference number: 2 (lower is better) Translates to: GTSQRSEIVHACLCDVPFSYGDA*HEHKIP Trigger: TGGGATTTTGTGTTCATGTCAAGCATCCCCATAAGA...AAAGGGGACATCACAGAGACAGGCGTGAACGATCTCGCTCCTTTGAGAGGTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR TCA 90 bp | CCATGGTGCTTGCCTTTATGGGACCTCTCAAAGGAGCGAGATCGTTCACGCCTGGCTATAGTCTCTGGTTaGAAGCGAACAAAGACATTG | + |
|
Preference number: 2 (lower is better) Translates to: PWCLPLWDLSKERDRSRLAIVSG*KRTKTL Trigger: CAATGTCTTTGTTCGCTTTCAACCAGAGACTATAGC...CAGGCGTGAACGATCTCGCTCCTTTGAGAGGTCCCATAAAGGCAAGCACCATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR TCA 90 bp | TCGATTGAGTCCACACATCATTACACTGCATATGGGCAACACCAGGAACCGCTGGTTGGCAAGGGAATTTaGAGTGCTCTAGCTGCAAGG | + |
|
Preference number: 2 (lower is better) Translates to: SIESTHHYTAYGQHQEPLVGKGI*SALAAR Trigger: CCTTGCAGCTAGAGCACTTCAAATTCCCTTGCCAAC...CAGCGGTTCCTGGTGTTGCCCATATGCAGTGTAATGATGTGTGGACTCAATCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR TCA 90 bp | GACTGCGAGACCTGCTTCTTGATCTTGAGCTGTATGTTCCAGATCGACTTCGCCATTGTAAGGGCTTTTTaGCGCCTGCTGTCTATCCTC | + |
|
Preference number: 2 (lower is better) Translates to: DCETCFLILSCMFQIDFAIVRAF*RLLSIL Trigger: GAGGATAGACAGCAGGCGTCAAAAAGCCCTTACAAT...GGCGAAGTCGATCTGGAACATACAGCTCAAGATCAAGAAGCAGGTCTCGCAGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR TCA 90 bp | CCCGACAGAACTAGAAGACGCTGCCAGATGGGTATGGACCACTTCAGTGAATCTTGGAGTCTGTTGCCATaGCGACAGCTTCATCTCTAT | + |
|
Preference number: 2 (lower is better) Translates to: PDRTRRRCQMGMDHFSESWSLLP*RQLHLY Trigger: ATAGAGATGAAGCTGTCGTCATGGCAACAGACTCCA...AGATTCACTGAAGTGGTCCATACCCATCTGGCAGCGTCTTCTAGTTCTGTCGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000145186.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR GCA 90 bp | GGAACCGCTGCAGTGTCAGAGGATGAAAGTCAGCGCCTATGCCTGCCATGTCCTCCTTGTAAAAATCTTTaGCCATGCAGACAAACCAGT | + |
|
Preference number: 2 (lower is better) Translates to: GTAAVSEDESQRLCLPCPPCKNL*PCRQTS Trigger: ACTGGTTTGTCTGCATGGGCAAAGATTTTTACAAGG...AGGACATGGCAGGCATAGGCGCTGACTTTCATCCTCTGACACTGCAGCGGTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129002.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR GCA 90 bp | CCATGTCCTGAGCGACTGCCACCATGGTGCTTGCCTTTATGGGACCTCTCAAAGCAAGGGAATTTGAAGTaGTCTAGCTGCAAGGTAGAT | + |
|
Preference number: 2 (lower is better) Translates to: PCPERLPPWCLPLWDLSKQGNLK*SSCKVD Trigger: ATCTACCTTGCAGCTAGAGCACTTCAAATTCCCTTG...CTTTGAGAGGTCCCATAAAGGCAAGCACCATGGTGGCAGTCGCTCAGGACATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR GCA 90 bp | GGTGAGGAGAACCATGATTATGATGTCTTCGAGGGCTTTCACTGTGACTGCGAGGGCTTTCACTGTGACTaGGAGACCTGCTTCTTGATC | + |
|
Preference number: 2 (lower is better) Translates to: GEENHDYDVFEGFHCDCEGFHCD*ETCFLI Trigger: GATCAAGAAGCAGGTCTCGCAGTCACAGTGAAAGCC...CTCGCAGTCACAGTGAAAGCCCTCGAAGACATCATAATCATGGTTCTCCTCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTGCCTTTATGGGACCTCTCAAAGGAGCGAGATCGTTCACGCCTGTCTCTGTGACACTGGCTTCTCCTTaGGGATTTCGATACTTCACT | + |
|
Preference number: 2 (lower is better) Translates to: LAFMGPLKGARSFTPVSVTLASP*GFRYFT Trigger: AGTGAAGTATCGAAATCCCCAAGGAGAAGCCAGTGT...CACAGAGACAGGCGTGAACGATCTCGCTCCTTTGAGAGGTCCCATAAAGGCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129002.8 |
||
| 3UTR-3UTR CCA 90 bp | AGCGACTGCCACCATGGTGCTTGCCTTTATGGGACCTCTCAAAGGAGCGAGATCGAATCTCCTCTTCTGTaGTACCAAACAGAAGAAACC | + |
|
Preference number: 2 (lower is better) Translates to: SDCHHGACLYGTSQRSEIESPLL*YQTEET Trigger: GGTTTCTTCTGTTTGGTACCACAGAAGAGGAGATTC...GATCTCGCTCCTTTGAGAGGTCCCATAAAGGCAAGCACCATGGTGGCAGTCGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR CCA 90 bp | TTCACTTCTCTTGGTGATGATGGTTTAGAGGCTGGAGAAAATCCACCAAGAGTTGAGCTTGCACTGGACTaGCTGGAGAGCAGGCTAGCC | + |
|
Preference number: 2 (lower is better) Translates to: FTSLGDDGLEAGENPPRVELALD*LESRLA Trigger: GGCTAGCCTGCTCTCCAGCCAGTCCAGTGCAAGCTC...AACTCTTGGTGGATTTTCTCCAGCCTCTAAACCATCATCACCAAGAGAAGTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154585.8 |
||
| 3UTR-3UTR TCA 90 bp | GGTATGGACCACTTCAGTGAATCTCGGATGAGAGCTTGCACTGGACTGGCTGGATCTTATGGGGATGCTTaGCATGAACACAAAATCCCA | + |
|
Preference number: 2 (lower is better) Translates to: GMDHFSESRMRACTGLAGSYGDA*HEHKIP Trigger: TGGGATTTTGTGTTCATGTCAAGCATCCCCATAAGA...TCCAGCCAGTCCAGTGCAAGCTCTCATCCGAGATTCACTGAAGTGGTCCATACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000145186.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR TCA 90 bp | ACATGCTATAGTCTCTGGTTGAAAGCGAACAAAGACATTGGTTCGAAGACTGTCCCAATCAGGCCATCCTaGGGTCATGGGCTGAAGTGC | + |
|
Preference number: 2 (lower is better) Translates to: TCYSLWLKANKDIGSKTVPIRPS*GHGLKC Trigger: GCACTTCAGCCCATGACCTCAGGATGGCCTGATTGG...GACAGTCTTCGAACCAATGTCTTTGTTCGCTTTCAACCAGAGACTATAGCATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154585.8 |
||
| 3UTR-3UTR TCA 90 bp | GGGCCGAGTTGGCAAGGGAATTTGAAGTGCTCTAGCTGCAAGGTAGATACAAGCTCTTATGGGGATGCTTaGCATGAACACAAAATCCCA | + |
|
Preference number: 2 (lower is better) Translates to: GPSWQGNLKCSSCKVDTSSYGDA*HEHKIP Trigger: TGGGATTTTGTGTTCATGTCAAGCATCCCCATAAGA...GCTTGTATCTACCTTGCAGCTAGAGCACTTCAAATTCCCTTGCCAACTCGGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000144810.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR TCA 90 bp | GTCTTCTTGGGCTGTGTGATCTGGAACGGGACCTGGTTCTTGACCTTGATCTACTCTATGCAGATTTCCTaGATCTCCTCTTCTGTGGTA | + |
|
Preference number: 2 (lower is better) Translates to: VFLGCVIWNGTWFLTLIYSMQIS*ISSSVV Trigger: TACCACAGAAGAGGAGATTCAGGAAATCTGCATAGA...GTAGATCAAGGTCAAGAACCAGGTCCCGTTCCAGATCACACAGCCCAAGAAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR CCA 90 bp | ACATGCTATAGTCTCTGGTTGAAAGCGAACAAAGACATTGGTTCGAAGACTGTCGCACTTTGCAGGGGTTaGGGTAGAGGCACTTGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: TCYSLWLKANKDIGSKTVALCRG*GRGTWR Trigger: TCTCCAAGTGCCTCTACCCCAACCCCTGCAAAGTGC...GACAGTCTTCGAACCAATGTCTTTGTTCGCTTTCAACCAGAGACTATAGCATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144810.8 |
||
| 3UTR-3UTR TCA 90 bp | TCGATTGAGTCCACACATCATTACACTGCATATGGGCAACACCAGGAACCGCTGGCTATAGTCTCTGGTTaGAAGCGAACAAAGACATTG | + |
|
Preference number: 2 (lower is better) Translates to: SIESTHHYTAYGQHQEPLAIVSG*KRTKTL Trigger: CAATGTCTTTGTTCGCTTTCAACCAGAGACTATAGC...CAGCGGTTCCTGGTGTTGCCCATATGCAGTGTAATGATGTGTGGACTCAATCGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
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| 3UTR-3UTR TCA 90 bp | TACCATCATGGACTACCCAGGCAGTTTGAACCAGGGTTTGGTTACGTTCACATTTGGAGTCTGTTGCCATaGCGACAGCTTCATCTCTAT | + |
|
Preference number: 2 (lower is better) Translates to: YHHGLPRQFEPGFGYVHIWSLLP*RQLHLY Trigger: ATAGAGATGAAGCTGTCGTCATGGCAACAGACTCCA...AATGTGAACGTAACCAAACCCTGGTTCAAACTGCCTGGGTAGTCCATGATGGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000145186.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTATGGGACCTCTCAAAGGAGCGAGATCGTTCACGCCTGTCTCTGTGATGTCCACATGCTATAGTCTCTaGTTGAAAGCGAACAAAGAC | + |
|
Preference number: 2 (lower is better) Translates to: FMGPLKGARSFTPVSVMSTCYSL*LKANKD Trigger: GTCTTTGTTCGCTTTCAACCAGAGACTATAGCATGT...GGACATCACAGAGACAGGCGTGAACGATCTCGCTCCTTTGAGAGGTCCCATAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR CCA 90 bp | AATTTGAAGTGCTCTAGCTGCAAGGTAGATACAAGCACATGCTATAGTCTCTGGGAAGACGCTGCCAGATaGGTATGGACCACTTCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: NLKCSSCKVDTSTCYSLWEDAAR*VWTTSV Trigger: CACTGAAGTGGTCCATACCCATCTGGCAGCGTCTTC...CCAGAGACTATAGCATGTGCTTGTATCTACCTTGCAGCTAGAGCACTTCAAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154585.8 |
||
| 3UTR CAA 90 bp | GTCTTCGAGGGCTTTCACTGTGACTGCGAGACCTGCTTCTTGATCTaGAGCTGTATGTTCCAGATCGACTTCGCCTATTATTATAATGTC | + |
|
Preference number: 2 (lower is better) Translates to: VFEGFHCDCETCFLI*SCMFQIDFAYYYNV Trigger: GACATTATAATAATAGGCGAAGTCGATCTGGAACATACAGCTCAAGATCAAGAAGCAGGTCTCGCAGTCACAGTGAAAGCCCTCGAAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
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| 3UTR-3UTR TCA 90 bp | CTGAGTGATCCCGAGTCTTGCTCTGAGATCGAGACCGAGACTTTTTCCTCTTATTCTATGCAGATTTCCTaGATCTCCTCTTCTGTGGTA | + |
|
Preference number: 2 (lower is better) Translates to: LSDPESCSEIETETFSSYSMQIS*ISSSVV Trigger: TACCACAGAAGAGGAGATTCAGGAAATCTGCATAGA...ATAAGAGGAAAAAGTCTCGGTCTCGATCTCAGAGCAAGACTCGGGATCACTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR TCA 90 bp | TTCCAGCAATTCATAGTTAGGCTTTTTCCTGGTATAAAGTCTAAGCGTCTCTATCCTGAGGTCATGGGCTaGAGTGCAGAGGGCAGAGTT | + |
|
Preference number: 2 (lower is better) Translates to: FQQFIVRLFPGIKSKRLYPEVMG*SAEGRV Trigger: AACTCTGCCCTCTGCACTTCAGCCCATGACCTCAGG...ATAGAGACGCTTAGACTTTATACCAGGAAAAAGCCTAACTATGAATTGCTGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154585.8 |
||
| 3UTR-3UTR GCA 90 bp | TCGATTGAGTCCACACATCATTACACTGCATATGGGCAACACCAGGAACCGCTGCCTTGTAAAAATCTTTaGCCATGCAGACAAACCAGT | + |
|
Preference number: 2 (lower is better) Translates to: SIESTHHYTAYGQHQEPLPCKNL*PCRQTS Trigger: ACTGGTTTGTCTGCATGGGCAAAGATTTTTACAAGG...CAGCGGTTCCTGGTGTTGCCCATATGCAGTGTAATGATGTGTGGACTCAATCGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029416.14 ENSMUST00000129002.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR CCA 90 bp | AGCACATGCTATAGTCTCTGGTTGAAAGCGAACAAAGACATTGGTTCGAAGACTGCTGCCAGATGGGTATaGACCACTTCAGTGAATCTC | + |
|
Preference number: 2 (lower is better) Translates to: STCYSLWLKANKDIGSKTAARWV*TTSVNL Trigger: GAGATTCACTGAAGTGGTCCATACCCATCTGGCAGC...AGTCTTCGAACCAATGTCTTTGTTCGCTTTCAACCAGAGACTATAGCATGTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154585.8 |
||
| 3UTR CAA 90 bp | TATGATGTCTTCGAGGGCTTTCACTGTGACTGCGAGACCTGCTTCTaGATCTTGAGCTGTATGTTCCAGATCGACTTCGCCTATTATTAT | + |
|
Preference number: 2 (lower is better) Translates to: YDVFEGFHCDCETCF*ILSCMFQIDFAYYY Trigger: ATAATAATAGGCGAAGTCGATCTGGAACATACAGCTCAAGATCAAGAAGCAGGTCTCGCAGTCACAGTGAAAGCCCTCGAAGACATCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTCTGGTTGAAAGCGAACAAAGACATTGGTTCGAAGACTGTCATTCATGTAATAGTCCCCGATTCCAGTaGCCTATTCTCAGAACACTG | + |
|
Preference number: 2 (lower is better) Translates to: SLVESEQRHWFEDCHSCNSPRFQ*PILRTL Trigger: CAGTGTTCTGAGAATAGGTCACTGGAATCGGGGACT...ATTACATGAATGACAGTCTTCGAACCAATGTCTTTGTTCGCTTTCAACCAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129002.8 |
||
| 3UTR-3UTR TCA 90 bp | GTTCCATCAAGATTCAATCCCTTTGCTTTTAACTTGGCTTCCTGTAAGGCTACTTGGGGATGCTTGACATaGACACAAAATCCCAACTCC | + |
|
Preference number: 2 (lower is better) Translates to: VPSRFNPFAFNLASCKATWGCLT*TQNPNS Trigger: GGAGTTGGGATTTTGTGTTCATGTCAAGCATCCCCA...AGTAGCCTTACAGGAAGCCAAGTTAAAAGCAAAGGGATTGAATCTTGATGGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000144810.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR TCA 90 bp | CATCAAGATTCAATCCCTTTGCTTTTAACTTGGCTTCCTGTAAGGCTACTTTTCGTTGGCAAGGGAATTTaGAGTGCTCTAGCTGCAAGG | + |
|
Preference number: 2 (lower is better) Translates to: HQDSIPLLLTWLPVRLLFVGKGI*SALAAR Trigger: CCTTGCAGCTAGAGCACTTCAAATTCCCTTGCCAAC...GAAAAGTAGCCTTACAGGAAGCCAAGTTAAAAGCAAAGGGATTGAATCTTGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000144810.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR GCA 90 bp | CATGCAGACAAACCAGTGTTAGGAAAGTATTCACCATCATTTAAACAAATAACCCGACTGCCACCATGGTaGTTGCCTTTATGGGACCTC | + |
|
Preference number: 2 (lower is better) Translates to: HADKPVLGKYSPSFKQITRLPPW*LPLWDL Trigger: GAGGTCCCATAAAGGCAAGCACCATGGTGGCAGTCG...GGTTATTTGTTTAAATGATGGTGAATACTTTCCTAACACTGGTTTGTCTGCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR CCA 90 bp | GTTCCATCAAGATTCAATCCCTTTGCTTTTAACTTGGCTTCCTGTAAGGCTACTAAGGATCAGGGGGCTTaGAGTCCTGTAATATTGAGC | + |
|
Preference number: 2 (lower is better) Translates to: VPSRFNPFAFNLASCKATKDQGA*SPVILS Trigger: GCTCAATATTACAGGACTCCAAGCCCCCTGATCCTT...AGTAGCCTTACAGGAAGCCAAGTTAAAAGCAAAGGGATTGAATCTTGATGGAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144810.8 |
||
| 3UTR CAA 90 bp | TGCTCTAGCTGCAAGGTAGATACAAGCACATGCTATAGTCTCTGGTaGAAAGCGAACAAAGACATTGGTTCGAAGACTGTCATTCATGTA | + |
|
Preference number: 2 (lower is better) Translates to: CSSCKVDTSTCYSLW*KANKDIGSKTVIHV Trigger: TACATGAATGACAGTCTTCGAACCAATGTCTTTGTTCGCTTTCAACCAGAGACTATAGCATGTGCTTGTATCTACCTTGCAGCTAGAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000144810.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR TCA 90 bp | AATTTGAAGTGCTCTAGCTGCAAGGTAGATACAAGCACATGCTATAGTCTCTGGGCTATAGTCTCTGGTTaGAAGCGAACAAAGACATTG | + |
|
Preference number: 2 (lower is better) Translates to: NLKCSSCKVDTSTCYSLWAIVSG*KRTKTL Trigger: CAATGTCTTTGTTCGCTTTCAACCAGAGACTATAGC...CCAGAGACTATAGCATGTGCTTGTATCTACCTTGCAGCTAGAGCACTTCAAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000144810.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR TCA 90 bp | ACATTAATGGAGACTGGTGATTTCTCTTCAGCTTTCACTTCTCTTGGTGATGATAAATCCACCAAGAGTTaGAAGGGCTGGAGTTCCATC | + |
|
Preference number: 2 (lower is better) Translates to: TLMETGDFSSAFTSLGDDKSTKS*KGWSSI Trigger: GATGGAACTCCAGCCCTTTCAACTCTTGGTGGATTT...ATCATCACCAAGAGAAGTGAAAGCTGAAGAGAAATCACCAGTCTCCATTAATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000144810.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR TCA 90 bp | TATAGTCTCTGGTTGAAAGCGAACAAAGACATTGGTTCGAAGACTGTCATTCATGAGGGCAGAGTTCTATaGCTTACCATCATGGACTAC | + |
|
Preference number: 2 (lower is better) Translates to: YSLWLKANKDIGSKTVIHEGRVL*LTIMDY Trigger: GTAGTCCATGATGGTAAGTCATAGAACTCTGCCCTC...ATGAATGACAGTCTTCGAACCAATGTCTTTGTTCGCTTTCAACCAGAGACTATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154585.8 |
||
| 3UTR-3UTR GCA 90 bp | ATGTTTGGCCTTAAGGTGAGGAGAACCATGATTATGATGTCTTCGAGGGCTTTCAAAAATCTTTGCCCATaGAGACAAACCAGTGTTAGG | + |
|
Preference number: 2 (lower is better) Translates to: MFGLKVRRTMIMMSSRAFKNLCP*RQTSVR Trigger: CCTAACACTGGTTTGTCTGCATGGGCAAAGATTTTT...GAAAGCCCTCGAAGACATCATAATCATGGTTCTCCTCACCTTAAGGCCAAACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129002.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR TCA 90 bp | TTCTTGATCTTGAGCTGTATGTTCCAGATCGACTTCGCCTATTATTATAATGTCATTGTAAGGGCTTTTTaGCGCCTGCTGTCTATCCTC | + |
|
Preference number: 2 (lower is better) Translates to: FLILSCMFQIDFAYYYNVIVRAF*RLLSIL Trigger: GAGGATAGACAGCAGGCGTCAAAAAGCCCTTACAAT...GACATTATAATAATAGGCGAAGTCGATCTGGAACATACAGCTCAAGATCAAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR TCA 90 bp | TATAGTCTCTGGTTGAAAGCGAACAAAGACATTGGTTCGAAGACTGTCATTCATGAGCTGAGGCAAACCTaGGTTAACTCAAGACTGAAA | + |
|
Preference number: 2 (lower is better) Translates to: YSLWLKANKDIGSKTVIHELRQT*VNSRLK Trigger: TTTCAGTCTTGAGTTAACTCAGGTTTGCCTCAGCTC...ATGAATGACAGTCTTCGAACCAATGTCTTTGTTCGCTTTCAACCAGAGACTATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144810.8 |
||
| 3UTR-3UTR GCA 90 bp | TTGAGCTGTATGTTCCAGATCGACTTCGCCTATTATTATAATGTCTTCTTGGGCCAAGGGAATTTGAAGTaGTCTAGCTGCAAGGTAGAT | + |
|
Preference number: 2 (lower is better) Translates to: LSCMFQIDFAYYYNVFLGQGNLK*SSCKVD Trigger: ATCTACCTTGCAGCTAGAGCACTTCAAATTCCCTTG...GCCCAAGAAGACATTATAATAATAGGCGAAGTCGATCTGGAACATACAGCTCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR GCA 90 bp | TTGAAAGGGCTGGAGTTCCATCAAGATTCAATCCCTTTGCTTTTAACTTGGCTTGAAGTGAAGATTTGTTaGCATGACGACAGCTTCATC | + |
|
Preference number: 2 (lower is better) Translates to: LKGLEFHQDSIPLLLTWLEVKIC*HDDSFI Trigger: GATGAAGCTGTCGTCATGGCAACAAATCTTCACTTC...AAGCCAAGTTAAAAGCAAAGGGATTGAATCTTGATGGAACTCCAGCCCTTTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144810.8 |
||
| 3UTR-3UTR CCA 90 bp | AGCACATGCTATAGTCTCTGGTTGAAAGCGAACAAAGACATTGGTTCGAAGACTACATGCTATAGTCTCTaGTTGAAAGCGAACAAAGAC | + |
|
Preference number: 2 (lower is better) Translates to: STCYSLWLKANKDIGSKTTCYSL*LKANKD Trigger: GTCTTTGTTCGCTTTCAACCAGAGACTATAGCATGT...AGTCTTCGAACCAATGTCTTTGTTCGCTTTCAACCAGAGACTATAGCATGTGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000144810.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGAAAGGGCTGGAGTTCCATCAAGATTCAATCCCTTTGCTTTTAACTTGGCTTGAATCTCCTCTTCTGTaGTACCAAACAGAAGAAACC | + |
|
Preference number: 2 (lower is better) Translates to: LKGLEFHQDSIPLLLTWLESPLL*YQTEET Trigger: GGTTTCTTCTGTTTGGTACCACAGAAGAGGAGATTC...AAGCCAAGTTAAAAGCAAAGGGATTGAATCTTGATGGAACTCCAGCCCTTTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000144810.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR CCA 90 bp | CATGCAGACAAACCAGTGTTAGGAAAGTATTCACCATCATTTAAACAAATAACCTGGTGCTTGCCTTTATaGGACCTCTCAAAGGAGCGA | + |
|
Preference number: 2 (lower is better) Translates to: HADKPVLGKYSPSFKQITWCLPL*DLSKER Trigger: TCGCTCCTTTGAGAGGTCCCATAAAGGCAAGCACCA...GGTTATTTGTTTAAATGATGGTGAATACTTTCCTAACACTGGTTTGTCTGCATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGTTTGAACCAGGGTTTGGTTACGTTCACATTCTAAGACTTGTAAATACATTATGGGGATGCTTGACATaGACACAAAATCCCAACTCC | + |
|
Preference number: 2 (lower is better) Translates to: QFEPGFGYVHILRLVNTLWGCLT*TQNPNS Trigger: GGAGTTGGGATTTTGTGTTCATGTCAAGCATCCCCA...TAATGTATTTACAAGTCTTAGAATGTGAACGTAACCAAACCCTGGTTCAAACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000144810.8 ENSMUST00000145186.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR TCA 90 bp | CATCAAGATTCAATCCCTTTGCTTTTAACTTGGCTTCCTGTAAGGCTACTTTTCTCTATGCAGATTTCCTaGATCTCCTCTTCTGTGGTA | + |
|
Preference number: 2 (lower is better) Translates to: HQDSIPLLLTWLPVRLLFSMQIS*ISSSVV Trigger: TACCACAGAAGAGGAGATTCAGGAAATCTGCATAGA...GAAAAGTAGCCTTACAGGAAGCCAAGTTAAAAGCAAAGGGATTGAATCTTGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000144810.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR CCA 90 bp | CATCAAGATTCAATCCCTTTGCTTTTAACTTGGCTTCCTGTAAGGCTACTTTTCGAATCTCCTCTTCTGTaGTACCAAACAGAAGAAACC | + |
|
Preference number: 2 (lower is better) Translates to: HQDSIPLLLTWLPVRLLFESPLL*YQTEET Trigger: GGTTTCTTCTGTTTGGTACCACAGAAGAGGAGATTC...GAAAAGTAGCCTTACAGGAAGCCAAGTTAAAAGCAAAGGGATTGAATCTTGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000144810.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR TCA 90 bp | TTCCAGCAATTCATAGTTAGGCTTTTTCCTGGTATAAAGTCTAAGCGTCTCTATTCTTATGGGGATGCTTaGCATGAACACAAAATCCCA | + |
|
Preference number: 2 (lower is better) Translates to: FQQFIVRLFPGIKSKRLYSYGDA*HEHKIP Trigger: TGGGATTTTGTGTTCATGTCAAGCATCCCCATAAGA...ATAGAGACGCTTAGACTTTATACCAGGAAAAAGCCTAACTATGAATTGCTGGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000144810.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR TCA 90 bp | ATCTTGAGCTGTATGTTCCAGATCGACTTCGCCTATTATTATAATGTCTTCTTGGCTATAGTCTCTGGTTaGAAGCGAACAAAGACATTG | + |
|
Preference number: 2 (lower is better) Translates to: ILSCMFQIDFAYYYNVFLAIVSG*KRTKTL Trigger: CAATGTCTTTGTTCGCTTTCAACCAGAGACTATAGC...CAAGAAGACATTATAATAATAGGCGAAGTCGATCTGGAACATACAGCTCAAGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGTTTGAACCAGGGTTTGGTTACGTTCACATTCTAAGACTTGTAAATACATTAGAAGATTTGTTGCCATaGCGACAGCTTCATCTCTAT | + |
|
Preference number: 2 (lower is better) Translates to: QFEPGFGYVHILRLVNTLEDLLP*RQLHLY Trigger: ATAGAGATGAAGCTGTCGTCATGGCAACAAATCTTC...TAATGTATTTACAAGTCTTAGAATGTGAACGTAACCAAACCCTGGTTCAAACTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144810.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCTTGATCTTGAGCTGTATGTTCCAGATCGACTTCGCCTATTATTATAATGTCAAAAATCTTTGCCCATaGAGACAAACCAGTGTTAGG | + |
|
Preference number: 2 (lower is better) Translates to: FLILSCMFQIDFAYYYNVKNLCP*RQTSVR Trigger: CCTAACACTGGTTTGTCTGCATGGGCAAAGATTTTT...GACATTATAATAATAGGCGAAGTCGATCTGGAACATACAGCTCAAGATCAAGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129002.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR GCA 90 bp | CATGCAGACAAACCAGTGTTAGGAAAGTATTCACCATCATTTAAACAAATAACCAAAAATCTTTGCCCATaGAGACAAACCAGTGTTAGG | + |
|
Preference number: 2 (lower is better) Translates to: HADKPVLGKYSPSFKQITKNLCP*RQTSVR Trigger: CCTAACACTGGTTTGTCTGCATGGGCAAAGATTTTT...GGTTATTTGTTTAAATGATGGTGAATACTTTCCTAACACTGGTTTGTCTGCATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029416.14 ENSMUST00000129002.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR CCA 90 bp | CATGCAGACAAACCAGTGTTAGGAAAGTATTCACCATCATTTAAACAAATAACCACATGCTATAGTCTCTaGTTGAAAGCGAACAAAGAC | + |
|
Preference number: 2 (lower is better) Translates to: HADKPVLGKYSPSFKQITTCYSL*LKANKD Trigger: GTCTTTGTTCGCTTTCAACCAGAGACTATAGCATGT...GGTTATTTGTTTAAATGATGGTGAATACTTTCCTAACACTGGTTTGTCTGCATG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| 3UTR GCA 72 bp | ACCGCTGCAGTGTCAGAGGATGAAAGTCAGCGCCTATaGCTGCCATGTCCTGAGCGACTGCCACCATGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: TAAVSEDESQRL*LPCPERLPPWC Trigger: GCACCATGGTGGCAGTCGCTCAGGACATGGCAGGCATAGGCGCTGACTTTCATCCTCTGACACTGCAGCGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR CAA 90 bp | GACTGGCTGGAGAGCAGGCTAGCCAATCAGGCCATCCTGAGGTCATGGGCTGAACAAGGATCAGGGGGCTaGGAGTCTGTTGCCATGACG | + |
|
Preference number: 3 (lower is better) Translates to: DWLESRLANQAILRSWAEQGSGG*ESVAMT Trigger: CGTCATGGCAACAGACTCCAAGCCCCCTGATCCTTG...TTCAGCCCATGACCTCAGGATGGCCTGATTGGCTAGCCTGCTCTCCAGCCAGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000145186.8 ENSMUST00000154585.8 |
||
| 3UTR GCA 72 bp | CTGCAGTGTCAGAGGATGAAAGTCAGCGCCTATGCCTaGCATGTCCTGAGCGACTGCCACCATGGTGCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: LQCQRMKVSAYA*HVLSDCHHGAC Trigger: GCAAGCACCATGGTGGCAGTCGCTCAGGACATGGCAGGCATAGGCGCTGACTTTCATCCTCTGACACTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| 3UTR CCA 72 bp | CGCCTATGCCTGCCATGTCCTGAGCGACTGCCACCATaGTGCTTGCCTTTATGGGACCTCTCAAAGGAGCGA | + |
|
Preference number: 3 (lower is better) Translates to: RLCLPCPERLPP*CLPLWDLSKER Trigger: TCGCTCCTTTGAGAGGTCCCATAAAGGCAAGCACCATGGTGGCAGTCGCTCAGGACATGGCAGGCATAGGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR CAA 90 bp | CCATGTCCTGAGCGACTGCCACCATGGTGCTTGCCTTTATGGGACCTCTCAAAGCAAGGATCAGGGGGCTaGGAGTCTGTTGCCATGACG | + |
|
Preference number: 3 (lower is better) Translates to: PCPERLPPWCLPLWDLSKQGSGG*ESVAMT Trigger: CGTCATGGCAACAGACTCCAAGCCCCCTGATCCTTG...CTTTGAGAGGTCCCATAAAGGCAAGCACCATGGTGGCAGTCGCTCAGGACATGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| 3UTR CCA 72 bp | TGTCCTGAGCGACTGCCACCATGGTGCTTGCCTTTATaGGACCTCTCAAAGGAGCGAGATCGTTCACGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: CPERLPPWCLPL*DLSKERDRSRL Trigger: CAGGCGTGAACGATCTCGCTCCTTTGAGAGGTCCCATAAAGGCAAGCACCATGGTGGCAGTCGCTCAGGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| 3UTR TCA 72 bp | GCCAGATGGGTATGGACCACTTCAGTGAATCTCGGATaGGAGCTTGCACTGGACTGGCTGGAGAGCAGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: ARWVWTTSVNLG*ELALDWLESRL Trigger: TAGCCTGCTCTCCAGCCAGTCCAGTGCAAGCTCTCATCCGAGATTCACTGAAGTGGTCCATACCCATCTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000145186.8 ENSMUST00000154585.8 |
||
| 3UTR GCA 72 bp | CTATGCCTGCCATGTCCTGAGCGACTGCCACCATGGTaGTTGCCTTTATGGGACCTCTCAAAGGAGCGAGAT | + |
|
Preference number: 3 (lower is better) Translates to: LCLPCPERLPPW*LPLWDLSKERD Trigger: ATCTCGCTCCTTTGAGAGGTCCCATAAAGGCAAGCACCATGGTGGCAGTCGCTCAGGACATGGCAGGCATAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| 3UTR GCA 72 bp | AAAGTCAGCGCCTATGCCTGCCATGTCCTGAGCGACTaGCACCATGGTGCTTGCCTTTATGGGACCTCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: KVSAYACHVLSD*HHGACLYGTSQ Trigger: TTGAGAGGTCCCATAAAGGCAAGCACCATGGTGGCAGTCGCTCAGGACATGGCAGGCATAGGCGCTGACTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGCGACTGCCACCATGGTGCTTGCCTTTATGGGACCTCTCAAAGGAGCGAGATGACTACCCAGGCAGTTaGAACCAGGGTTTGGTTACG | + |
|
Preference number: 3 (lower is better) Translates to: ERLPPWCLPLWDLSKERDDYPGS*NQGLVT Trigger: CGTAACCAAACCCTGGTTCAAACTGCCTGGGTAGTC...ATCTCGCTCCTTTGAGAGGTCCCATAAAGGCAAGCACCATGGTGGCAGTCGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154585.8 |
||
| 3UTR GCA 72 bp | GGTATGGACCACTTCAGTGAATCTCGGATGAGAGCTTaGACTGGACTGGCTGGAGAGCAGGCTAGCCAATCA | + |
|
Preference number: 3 (lower is better) Translates to: GMDHFSESRMRA*TGLAGEQASQS Trigger: TGATTGGCTAGCCTGCTCTCCAGCCAGTCCAGTGCAAGCTCTCATCCGAGATTCACTGAAGTGGTCCATACC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000145186.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAACCGCTGCAGTGTCAGAGGATGAAAGTCAGCGCCTATGCCTGCCATGTCCTAACACTGGCTTCTCCTaGGGGATTTCGATACTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: GTAAVSEDESQRLCLPCPNTGFS*GISILH Trigger: GTGAAGTATCGAAATCCCCAAGGAGAAGCCAGTGTT...AGGACATGGCAGGCATAGGCGCTGACTTTCATCCTCTGACACTGCAGCGGTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129002.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAGAGGATGAAAGTCAGCGCCTATGCCTGCCATGTCCTGAGCGACTGCCACCAGTAATTCCAGGCAGTTaGAACCAGGGTTTGGTTACG | + |
|
Preference number: 3 (lower is better) Translates to: SEDESQRLCLPCPERLPPVIPGS*NQGLVT Trigger: CGTAACCAAACCCTGGTTCAAACTGCCTGGAATTAC...TGGTGGCAGTCGCTCAGGACATGGCAGGCATAGGCGCTGACTTTCATCCTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTGCAGTGTCAGAGGATGAAAGTCAGCGCCTATGCCTGCCATGTCCTGAGCGACATTGTAAGGGCTTTTaGACGCCTGCTGTCTATCCT | + |
|
Preference number: 3 (lower is better) Translates to: AAVSEDESQRLCLPCPERHCKGF*TPAVYP Trigger: AGGATAGACAGCAGGCGTCAAAAAGCCCTTACAATG...TCGCTCAGGACATGGCAGGCATAGGCGCTGACTTTCATCCTCTGACACTGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGCGCCTATGCCTGCCATGTCCTGAGCGACTGCCACCATGGTGCTTGCCTTTAACCTGCTTCTTGATCTaGAGCTGTATGTTCCAGATC | + |
|
Preference number: 3 (lower is better) Translates to: QRLCLPCPERLPPWCLPLTCFLI*SCMFQI Trigger: GATCTGGAACATACAGCTCAAGATCAAGAAGCAGGT...TAAAGGCAAGCACCATGGTGGCAGTCGCTCAGGACATGGCAGGCATAGGCGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGACCTCTCAAAGGAGCGAGATCGTTCACGCCTGTCTCTGTGATGTCCCCTTTGTAATTCCAGGCAGTTaGAACCAGGGTTTGGTTACG | + |
|
Preference number: 3 (lower is better) Translates to: GTSQRSEIVHACLCDVPFVIPGS*NQGLVT Trigger: CGTAACCAAACCCTGGTTCAAACTGCCTGGAATTAC...AAAGGGGACATCACAGAGACAGGCGTGAACGATCTCGCTCCTTTGAGAGGTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGGATGAAAGTCAGCGCCTATGCCTGCCATGTCCTGAGCGACTGCCACCATGGAAGCGAACAAAGACATaGGTTCGAAGACTGTCATTC | + |
|
Preference number: 3 (lower is better) Translates to: EDESQRLCLPCPERLPPWKRTKT*VRRLSF Trigger: GAATGACAGTCTTCGAACCAATGTCTTTGTTCGCTT...CCATGGTGGCAGTCGCTCAGGACATGGCAGGCATAGGCGCTGACTTTCATCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAACCGCTGCAGTGTCAGAGGATGAAAGTCAGCGCCTATGCCTGCCATGTCCTAAAATCCACCAAGAGTaGAAAGGGCTGGAGTTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: GTAAVSEDESQRLCLPCPKIHQE*KGLEFH Trigger: ATGGAACTCCAGCCCTTTCAACTCTTGGTGGATTTT...AGGACATGGCAGGCATAGGCGCTGACTTTCATCCTCTGACACTGCAGCGGTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR CAA 90 bp | GACTGCCACCATGGTGCTTGCCTTTATGGGACCTCTCAAAGGAGCGAGATCGTTAGTTGGCAAGGGAATTaGAAGTGCTCTAGCTGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: DCHHGACLYGTSQRSEIVSWQGN*KCSSCK Trigger: CTTGCAGCTAGAGCACTTCAAATTCCCTTGCCAACT...AACGATCTCGCTCCTTTGAGAGGTCCCATAAAGGCAAGCACCATGGTGGCAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| 3UTR TCA 72 bp | ATGTCCCCTTTCGTGCCTGTGTTTCTTGGTAACATCTaGGTGATCCCGAGTCTTGCTCTGAGATCGAGACCG | + |
|
Preference number: 3 (lower is better) Translates to: MSPFVPVFLGNI*VIPSLALRSRP Trigger: CGGTCTCGATCTCAGAGCAAGACTCGGGATCACTCAGATGTTACCAAGAAACACAGGCACGAAAGGGGACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| 3UTR TCA 72 bp | CTCTCAAAGGAGCGAGATCGTTCACGCCTGTCTCTGTaGTGTCCCCTTTCGTGCCTGTGTTTCTTGGTAACA | + |
|
Preference number: 3 (lower is better) Translates to: LSKERDRSRLSL*CPLSCLCFLVT Trigger: TGTTACCAAGAAACACAGGCACGAAAGGGGACATCACAGAGACAGGCGTGAACGATCTCGCTCCTTTGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| 3UTR TCA 72 bp | GGATCAGGGGGCTTGGAGTCCTGTAATATTGAGCCATaGGTAGTGGCTCACCTCATAATCCCAGCACTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: GSGGLESCNIEP*VVAHLIIPALC Trigger: GCAAAGTGCTGGGATTATGAGGTGAGCCACTACTCATGGCTCAATATTACAGGACTCCAAGCCCCCTGATCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144810.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTGCATATGGGCAACACCAGGAACCGCTGCAGTGTCAGAGGATGAAAGTCAGCCCCTTTGCTTTTAACTaGGCTTCCTGTAAGGCTACT | + |
|
Preference number: 3 (lower is better) Translates to: TAYGQHQEPLQCQRMKVSPFAFN*ASCKAT Trigger: AGTAGCCTTACAGGAAGCCAAGTTAAAAGCAAAGGG...GCTGACTTTCATCCTCTGACACTGCAGCGGTTCCTGGTGTTGCCCATATGCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTGCCTTTATGGGACCTCTCAAAGGAGCGAGATCGTTCACGCCTGTCTCTGTGCCCTTTGCTTTTAACTaGGCTTCCTGTAAGGCTACT | + |
|
Preference number: 3 (lower is better) Translates to: LAFMGPLKGARSFTPVSVPFAFN*ASCKAT Trigger: AGTAGCCTTACAGGAAGCCAAGTTAAAAGCAAAGGG...CACAGAGACAGGCGTGAACGATCTCGCTCCTTTGAGAGGTCCCATAAAGGCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTGCAGTGTCAGAGGATGAAAGTCAGCGCCTATGCCTGCCATGTCCTGAGCGACAAGATTCAATCCCTTaGCTTTTAACTTGGCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: AAVSEDESQRLCLPCPERQDSIP*LLTWLP Trigger: AGGAAGCCAAGTTAAAAGCAAAGGGATTGAATCTTG...TCGCTCAGGACATGGCAGGCATAGGCGCTGACTTTCATCCTCTGACACTGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| 3UTR GCA 72 bp | GATGTCTTCGAGGGCTTTCACTGTGACTGCGAGACCTaGTTCTTGATCTTGAGCTGTATGTTCCAGATCGAC | + |
|
Preference number: 3 (lower is better) Translates to: DVFEGFHCDCET*FLILSCMFQID Trigger: GTCGATCTGGAACATACAGCTCAAGATCAAGAAGCAGGTCTCGCAGTCACAGTGAAAGCCCTCGAAGACATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTCTCAAAGGAGCGAGATCGTTCACGCCTGTCTCTGTGATGTCCCCTTTCGTGCAAGATTCAATCCCTTaGCTTTTAACTTGGCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: PLKGARSFTPVSVMSPFVQDSIP*LLTWLP Trigger: AGGAAGCCAAGTTAAAAGCAAAGGGATTGAATCTTG...CACGAAAGGGGACATCACAGAGACAGGCGTGAACGATCTCGCTCCTTTGAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGAGCGAGATCGTTCACGCCTGTCTCTGTGATGTCCCCTTTCGTGCCTGTGTTTATTATAATGTCTTCTaGGGCTGTGTGATCTGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: RSEIVHACLCDVPFRACVYYNVF*GCVIWN Trigger: GTTCCAGATCACACAGCCCAAGAAGACATTATAATA...AACACAGGCACGAAAGGGGACATCACAGAGACAGGCGTGAACGATCTCGCTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| 3UTR GCA 72 bp | GCTTCTCCTTGGGGATTTCGATACTTCACTCACTGTTaGCATGACGACAGCTTCATCTCTATGTACCACTCC | + |
|
Preference number: 3 (lower is better) Translates to: ASPWGFRYFTHC*HDDSFISMYHS Trigger: GGAGTGGTACATAGAGATGAAGCTGTCGTCATGGCAACAGTGAGTGAAGTATCGAAATCCCCAAGGAGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129002.8 |
||
| 3UTR-3UTR CAA 90 bp | TCGATTGAGTCCACACATCATTACACTGCATATGGGCAACACCAGGAACCGCTGCCCTTTGCTTTTAACTaGGCTTCCTGTAAGGCTACT | + |
|
Preference number: 3 (lower is better) Translates to: SIESTHHYTAYGQHQEPLPFAFN*ASCKAT Trigger: AGTAGCCTTACAGGAAGCCAAGTTAAAAGCAAAGGG...CAGCGGTTCCTGGTGTTGCCCATATGCAGTGTAATGATGTGTGGACTCAATCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCGACTGCCACCATGGTGCTTGCCTTTATGGGACCTCTCAAAGGAGCGAGATCTCCTCAGGTTCTTTTTaGACTGTCTTCACATTAATG | + |
|
Preference number: 3 (lower is better) Translates to: SDCHHGACLYGTSQRSEISSGSF*TVFTLM Trigger: CATTAATGTGAAGACAGTCAAAAAAGAACCTGAGGA...GATCTCGCTCCTTTGAGAGGTCCCATAAAGGCAAGCACCATGGTGGCAGTCGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGAGTGATCCCGAGTCTTGCTCTGAGATCGAGACCGAGACTTTTTCCTCTTATCATTGTAAGGGCTTTTaGACGCCTGCTGTCTATCCT | + |
|
Preference number: 3 (lower is better) Translates to: LSDPESCSEIETETFSSYHCKGF*TPAVYP Trigger: AGGATAGACAGCAGGCGTCAAAAAGCCCTTACAATG...ATAAGAGGAAAAAGTCTCGGTCTCGATCTCAGAGCAAGACTCGGGATCACTCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTGGAGAAAATCCACCAAGAGTTGAAAGGGCTGGAGTTCCATCAAGATTCAATGACTACCCAGGCAGTTaGAACCAGGGTTTGGTTACG | + |
|
Preference number: 3 (lower is better) Translates to: AGENPPRVERAGVPSRFNDYPGS*NQGLVT Trigger: CGTAACCAAACCCTGGTTCAAACTGCCTGGGTAGTC...ATTGAATCTTGATGGAACTCCAGCCCTTTCAACTCTTGGTGGATTTTCTCCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144810.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTCCATCAAGATTCAATCCCTTTGCTTTTAACTTGGCTTCCTGTAAGGCTACTATCTCGGATGAGAGCTaGCACTGGACTGGCTGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: VPSRFNPFAFNLASCKATISDES*HWTGWR Trigger: TCTCCAGCCAGTCCAGTGCAAGCTCTCATCCGAGAT...AGTAGCCTTACAGGAAGCCAAGTTAAAAGCAAAGGGATTGAATCTTGATGGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154585.8 |
||
| 3UTR CCA 72 bp | TTAGTCCCCGATTCCAGTGACCTATTCTCAGAACACTaGCTTCTCCTTGGGGATTTCGATACTTCACTCACT | + |
|
Preference number: 3 (lower is better) Translates to: LVPDSSDLFSEH*LLLGDFDTSLT Trigger: AGTGAGTGAAGTATCGAAATCCCCAAGGAGAAGCCAGTGTTCTGAGAATAGGTCACTGGAATCGGGGACTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129002.8 |
||
| 3UTR-3UTR CAA 90 bp | TTAGAGGCTGGAGAAAATCCACCAAGAGTTGAAAGGGCTGGAGTTCCATCAAGAAAAATCCACCAAGAGTaGAAAGGGCTGGAGTTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: LEAGENPPRVERAGVPSRKIHQE*KGLEFH Trigger: ATGGAACTCCAGCCCTTTCAACTCTTGGTGGATTTT...TCTTGATGGAACTCCAGCCCTTTCAACTCTTGGTGGATTTTCTCCAGCCTCTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000144810.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCTTGAGCTGTATGTTCCAGATCGACTTCGCCTATTATTATAATGTCTTCTTGCAAGGATCAGGGGGCTaGGAGTCTGTTGCCATGACG | + |
|
Preference number: 3 (lower is better) Translates to: ILSCMFQIDFAYYYNVFLQGSGG*ESVAMT Trigger: CGTCATGGCAACAGACTCCAAGCCCCCTGATCCTTG...CAAGAAGACATTATAATAATAGGCGAAGTCGATCTGGAACATACAGCTCAAGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| 3UTR GCA 72 bp | CATGATTATGATGTCTTCGAGGGCTTTCACTGTGACTaGGAGACCTGCTTCTTGATCTTGAGCTGTATGTTC | + |
|
Preference number: 3 (lower is better) Translates to: HDYDVFEGFHCD*ETCFLILSCMF Trigger: GAACATACAGCTCAAGATCAAGAAGCAGGTCTCGCAGTCACAGTGAAAGCCCTCGAAGACATCATAATCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTAATTCCATCATGGACTACCCAGGCAGTTTGAACCAGGGTTTGGTTACGTTCAAGCGAACAAAGACATaGGTTCGAAGACTGTCATTC | + |
|
Preference number: 3 (lower is better) Translates to: CNSIMDYPGSLNQGLVTFKRTKT*VRRLSF Trigger: GAATGACAGTCTTCGAACCAATGTCTTTGTTCGCTT...GAACGTAACCAAACCCTGGTTCAAACTGCCTGGGTAGTCCATGATGGAATTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144810.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCACTTCTCTTGGTGATGATGGTTTAGAGGCTGGAGAAAATCCACCAAGAGTTAGTTGGCAAGGGAATTaGAAGTGCTCTAGCTGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: FTSLGDDGLEAGENPPRVSWQGN*KCSSCK Trigger: CTTGCAGCTAGAGCACTTCAAATTCCCTTGCCAACT...AACTCTTGGTGGATTTTCTCCAGCCTCTAAACCATCATCACCAAGAGAAGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000144810.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR CAA 90 bp | TATAGTCTCTGGTTGAAAGCGAACAAAGACATTGGTTCGAAGACTGTCATTCATACCAATGGGGCCGAGTaGGCAAGGGAATTTGAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: YSLWLKANKDIGSKTVIHTNGAE*AREFEV Trigger: CACTTCAAATTCCCTTGCCAACTCGGCCCCATTGGT...ATGAATGACAGTCTTCGAACCAATGTCTTTGTTCGCTTTCAACCAGAGACTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000144810.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR CAA 90 bp | CATCAAGATTCAATCCCTTTGCTTTTAACTTGGCTTCCTGTAAGGCTACTTTTCACCAATGGGGCCGAGTaGGCAAGGGAATTTGAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: HQDSIPLLLTWLPVRLLFTNGAE*AREFEV Trigger: CACTTCAAATTCCCTTGCCAACTCGGCCCCATTGGT...GAAAAGTAGCCTTACAGGAAGCCAAGTTAAAAGCAAAGGGATTGAATCTTGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000144810.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGTTTGGCCTTAAGGTGAGGAGAACCATGATTATGATGTCTTCGAGGGCTTTCAAAATCCACCAAGAGTaGAAAGGGCTGGAGTTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: MFGLKVRRTMIMMSSRAFKIHQE*KGLEFH Trigger: ATGGAACTCCAGCCCTTTCAACTCTTGGTGGATTTT...GAAAGCCCTCGAAGACATCATAATCATGGTTCTCCTCACCTTAAGGCCAAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR CAA 90 bp | TTACACCATTGTAAGGGCTTTTTGACGCCTGCTGTCTATCCTCAGGTTCTTTTTCATTGTAAGGGCTTTTaGACGCCTGCTGTCTATCCT | + |
|
Preference number: 3 (lower is better) Translates to: LHHCKGFLTPAVYPQVLFHCKGF*TPAVYP Trigger: AGGATAGACAGCAGGCGTCAAAAAGCCCTTACAATG...AAAAAGAACCTGAGGATAGACAGCAGGCGTCAAAAAGCCCTTACAATGGTGTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTCCATCAAGATTCAATCCCTTTGCTTTTAACTTGGCTTCCTGTAAGGCTACTCAAGGATCAGGGGGCTaGGAGTCCTGTAATATTGAG | + |
|
Preference number: 3 (lower is better) Translates to: VPSRFNPFAFNLASCKATQGSGG*ESCNIE Trigger: CTCAATATTACAGGACTCCAAGCCCCCTGATCCTTG...AGTAGCCTTACAGGAAGCCAAGTTAAAAGCAAAGGGATTGAATCTTGATGGAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144810.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCCAGCAATTCATAGTTAGGCTTTTTCCTGGTATAAAGTCTAAGCGTCTCTATACCAATGGGGCCGAGTaGGCAAGGGAATTTGAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: FQQFIVRLFPGIKSKRLYTNGAE*AREFEV Trigger: CACTTCAAATTCCCTTGCCAACTCGGCCCCATTGGT...ATAGAGACGCTTAGACTTTATACCAGGAAAAAGCCTAACTATGAATTGCTGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000144810.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGAGCTGTATGTTCCAGATCGACTTCGCCTATTATTATAATGTCTTCTTGGGCTGCGAGACCTGCTTCTaGATCTTGAGCTGTATGTTC | + |
|
Preference number: 3 (lower is better) Translates to: LSCMFQIDFAYYYNVFLGCETCF*ILSCMF Trigger: GAACATACAGCTCAAGATCAAGAAGCAGGTCTCGCA...GCCCAAGAAGACATTATAATAATAGGCGAAGTCGATCTGGAACATACAGCTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| 3UTR CCA 72 bp | AGCTGCAAGGTAGATACAAGCACATGCTATAGTCTCTaGTTGAAAGCGAACAAAGACATTGGTTCGAAGACT | + |
|
Preference number: 3 (lower is better) Translates to: SCKVDTSTCYSL*LKANKDIGSKT Trigger: AGTCTTCGAACCAATGTCTTTGTTCGCTTTCAACCAGAGACTATAGCATGTGCTTGTATCTACCTTGCAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000144810.8 ENSMUST00000154585.8 |
||
| 3UTR TCA 72 bp | ATTCATGTAATTCCATCATGGACTACCCAGGCAGTTTaGACCAGGGTTTGGTTACGTTCACATTCTAAGACT | + |
|
Preference number: 3 (lower is better) Translates to: IHVIPSWTTQAV*TRVWLRSHSKT Trigger: AGTCTTAGAATGTGAACGTAACCAAACCCTGGTTCAAACTGCCTGGGTAGTCCATGATGGAATTACATGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144810.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAAGATTCAATCCCTTTGCTTTTAACTTGGCTTCCTGTAAGGCTACTTTTCTTAGTTGGCAAGGGAATTaGAAGTGCTCTAGCTGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: SRFNPFAFNLASCKATFLSWQGN*KCSSCK Trigger: CTTGCAGCTAGAGCACTTCAAATTCCCTTGCCAACT...AAGAAAAGTAGCCTTACAGGAAGCCAAGTTAAAAGCAAAGGGATTGAATCTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000144810.8 ENSMUST00000154585.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCACTTCTCTTGGTGATGATGGTTTAGAGGCTGGAGAAAATCCACCAAGAGTTCAAGATTCAATCCCTTaGCTTTTAACTTGGCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: FTSLGDDGLEAGENPPRVQDSIP*LLTWLP Trigger: AGGAAGCCAAGTTAAAAGCAAAGGGATTGAATCTTG...AACTCTTGGTGGATTTTCTCCAGCCTCTAAACCATCATCACCAAGAGAAGTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000144810.8 ENSMUST00000154585.8 |
||
| CDS-3UTR GCA 90 bp | CTTGCCTTTATGGGACCTCTCAAAGGAGCGAGATCGTTCACGCCTGTCTCTGTGCGATGGAACAGCACCTaGCCTGTAGCCATCGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: LAFMGPLKGARSFTPVSVRWNST*PVAIAT Trigger: GGTGGCGATGGCTACAGGGCAGGTGCTGTTCCATCG...CACAGAGACAGGCGTGAACGATCTCGCTCCTTTGAGAGGTCCCATAAAGGCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| 3UTR CAA 72 bp | TGCCTGCCATGTCCTGAGCGACTGCCACCATGGTGCTaGCCTTTATGGGACCTCTCAAAGGAGCGAGATCGT | + |
|
Preference number: 4 (lower is better) Translates to: CLPCPERLPPWC*PLWDLSKERDR Trigger: ACGATCTCGCTCCTTTGAGAGGTCCCATAAAGGCAAGCACCATGGTGGCAGTCGCTCAGGACATGGCAGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| CDS-3UTR TCA 90 bp | GGTATGGACCACTTCAGTGAATCTCGGATGAGAGCTTGCACTGGACTGGCTGGAGCGAGTGGTCGATGGTaGGCGACACCTCCGAATACA | + |
|
Preference number: 4 (lower is better) Translates to: GMDHFSESRMRACTGLAGASGRW*ATPPNT Trigger: TGTATTCGGAGGTGTCGCTCACCATCGACCACTCGC...TCCAGCCAGTCCAGTGCAAGCTCTCATCCGAGATTCACTGAAGTGGTCCATACC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154585.8 |
||
| CDS-3UTR TCA 90 bp | GAGTCCACACATCATTACACTGCATATGGGCAACACCAGGAACCGCTGCAGTGTGCGAGTGGTCGATGGTaGGCGACACCTCCGAATACA | + |
|
Preference number: 4 (lower is better) Translates to: ESTHHYTAYGQHQEPLQCASGRW*ATPPNT Trigger: TGTATTCGGAGGTGTCGCTCACCATCGACCACTCGC...ACACTGCAGCGGTTCCTGGTGTTGCCCATATGCAGTGTAATGATGTGTGGACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029416.14 ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| CDS-3UTR GCA 90 bp | TCGATTGAGTCCACACATCATTACACTGCATATGGGCAACACCAGGAACCGCTGCGATGGAACAGCACCTaGCCTGTAGCCATCGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: SIESTHHYTAYGQHQEPLRWNST*PVAIAT Trigger: GGTGGCGATGGCTACAGGGCAGGTGCTGTTCCATCG...CAGCGGTTCCTGGTGTTGCCCATATGCAGTGTAATGATGTGTGGACTCAATCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029416.14 ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| CDS-3UTR TCA 90 bp | TTTCGATTGAGTCCACACATCATTACACTGCATATGGGCAACACCAGGAACCGCATGCCTGCCATGTCCTaGGCGACTGCCACCATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FRLSPHIITLHMGNTRNRMPAMS*ATATMV Trigger: CACCATGGTGGCAGTCGCTCAGGACATGGCAGGCAT...GCGGTTCCTGGTGTTGCCCATATGCAGTGTAATGATGTGTGGACTCAATCGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029416.14 |
||
| CDS-3UTR GCA 90 bp | GAGTCCACACATCATTACACTGCATATGGGCAACACCAGGAACCGCTGCAGTGTCGACTGCCACCATGGTaGTTGCCTTTATGGGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: ESTHHYTAYGQHQEPLQCRLPPW*LPLWDL Trigger: GAGGTCCCATAAAGGCAAGCACCATGGTGGCAGTCG...ACACTGCAGCGGTTCCTGGTGTTGCCCATATGCAGTGTAATGATGTGTGGACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029416.14 |
||
| CDS-3UTR CCA 90 bp | GAGTCCACACATCATTACACTGCATATGGGCAACACCAGGAACCGCTGCAGTGTGAGCGACTGCCACCATaGTGCTTGCCTTTATGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: ESTHHYTAYGQHQEPLQCERLPP*CLPLWD Trigger: GTCCCATAAAGGCAAGCACCATGGTGGCAGTCGCTC...ACACTGCAGCGGTTCCTGGTGTTGCCCATATGCAGTGTAATGATGTGTGGACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029416.14 |
||
| CDS-3UTR TCA 90 bp | TTTCGATTGAGTCCACACATCATTACACTGCATATGGGCAACACCAGGAACCGCTCACGCCTGTCTCTGTaGTGTCCCCTTTCGTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FRLSPHIITLHMGNTRNRSRLSL*CPLSCL Trigger: CAGGCACGAAAGGGGACATCACAGAGACAGGCGTGA...GCGGTTCCTGGTGTTGCCCATATGCAGTGTAATGATGTGTGGACTCAATCGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029416.14 |
||
| CDS-3UTR GCA 90 bp | TCGATTGAGTCCACACATCATTACACTGCATATGGGCAACACCAGGAACCGCTGCATGTCCTGAGCGACTaGCACCATGGTGCTTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SIESTHHYTAYGQHQEPLHVLSD*HHGACL Trigger: AAGGCAAGCACCATGGTGGCAGTCGCTCAGGACATG...CAGCGGTTCCTGGTGTTGCCCATATGCAGTGTAATGATGTGTGGACTCAATCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029416.14 |
||
| 3UTR CAA 72 bp | TTCGAGGGCTTTCACTGTGACTGCGAGACCTGCTTCTaGATCTTGAGCTGTATGTTCCAGATCGACTTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: FEGFHCDCETCF*ILSCMFQIDFA Trigger: GGCGAAGTCGATCTGGAACATACAGCTCAAGATCAAGAAGCAGGTCTCGCAGTCACAGTGAAAGCCCTCGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| CDS-3UTR TCA 90 bp | GAGTCCACACATCATTACACTGCATATGGGCAACACCAGGAACCGCTGCAGTGTAAATCCACCAAGAGTTaGAAGGGCTGGAGTTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: ESTHHYTAYGQHQEPLQCKSTKS*KGWSSI Trigger: GATGGAACTCCAGCCCTTTCAACTCTTGGTGGATTT...ACACTGCAGCGGTTCCTGGTGTTGCCCATATGCAGTGTAATGATGTGTGGACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029416.14 |
||
| CDS-3UTR CCA 90 bp | CCATGTCCTGAGCGACTGCCACCATGGTGCTTGCCTTTATGGGACCTCTCAAAGAACTGGCGGAGGTGGTaGAATACATTAATCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: PCPERLPPWCLPLWDLSKNWRRW*NTLITS Trigger: AGATGTGATTAATGTATTCCACCACCTCCGCCAGTT...CTTTGAGAGGTCCCATAAAGGCAAGCACCATGGTGGCAGTCGCTCAGGACATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| CDS-3UTR CCA 90 bp | AGCGACTGCCACCATGGTGCTTGCCTTTATGGGACCTCTCAAAGGAGCGAGATCAACTGGCGGAGGTGGTaGAATACATTAATCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: SDCHHGACLYGTSQRSEINWRRW*NTLITS Trigger: AGATGTGATTAATGTATTCCACCACCTCCGCCAGTT...GATCTCGCTCCTTTGAGAGGTCCCATAAAGGCAAGCACCATGGTGGCAGTCGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| CDS-3UTR CCA 90 bp | ACTGCATATGGGCAACACCAGGAACCGCTGCAGTGTCAGAGGATGAAAGTCAGCCTTTTTCCTCTTAACTaGCGGAGGTGGTGGAATACA | + |
|
Preference number: 4 (lower is better) Translates to: TAYGQHQEPLQCQRMKVSLFPLN*RRWWNT Trigger: TGTATTCCACCACCTCCGCCAGTTAAGAGGAAAAAG...GCTGACTTTCATCCTCTGACACTGCAGCGGTTCCTGGTGTTGCCCATATGCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| CDS-3UTR TCA 90 bp | GAGTCCACACATCATTACACTGCATATGGGCAACACCAGGAACCGCTGCAGTGTTCTCGAAACTGTGTTTaGCGAACGACTTGGAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: ESTHHYTAYGQHQEPLQCSRNCV*RTTWSR Trigger: TCTACTCCAAGTCGTTCGTCAAACACAGTTTCGAGA...ACACTGCAGCGGTTCCTGGTGTTGCCCATATGCAGTGTAATGATGTGTGGACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029416.14 ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| CDS-3UTR TCA 90 bp | GGTATGGACCACTTCAGTGAATCTCGGATGAGAGCTTGCACTGGACTGGCTGGACGCTTCTTCGATTTTTaGCGCAAGATTAATACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GMDHFSESRMRACTGLAGRFFDF*RKINTG Trigger: GCCTGTATTAATCTTGCGTCAAAAATCGAAGAAGCG...TCCAGCCAGTCCAGTGCAAGCTCTCATCCGAGATTCACTGAAGTGGTCCATACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154585.8 |
||
| CDS-3UTR CCA 90 bp | CCCGACAGAACTAGAAGACGCTGCCAGATGGGTATGGACCACTTCAGTGAATCTCTTTTTCCTCTTAACTaGCGGAGGTGGTGGAATACA | + |
|
Preference number: 4 (lower is better) Translates to: PDRTRRRCQMGMDHFSESLFPLN*RRWWNT Trigger: TGTATTCCACCACCTCCGCCAGTTAAGAGGAAAAAG...AGATTCACTGAAGTGGTCCATACCCATCTGGCAGCGTCTTCTAGTTCTGTCGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000145186.8 ENSMUST00000154585.8 |
||
| CDS-3UTR CCA 90 bp | TTTCGATTGAGTCCACACATCATTACACTGCATATGGGCAACACCAGGAACCGCTGGTGCTTGCCTTTATaGGACCTCTCAAAGGAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: FRLSPHIITLHMGNTRNRWCLPL*DLSKER Trigger: TCGCTCCTTTGAGAGGTCCCATAAAGGCAAGCACCA...GCGGTTCCTGGTGTTGCCCATATGCAGTGTAATGATGTGTGGACTCAATCGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029416.14 |
||
| CDS-3UTR TCA 90 bp | TTTCGATTGAGTCCACACATCATTACACTGCATATGGGCAACACCAGGAACCGCTGGGGATGCTTGACATaGACACAAAATCCCAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: FRLSPHIITLHMGNTRNRWGCLT*TQNPNS Trigger: GGAGTTGGGATTTTGTGTTCATGTCAAGCATCCCCA...GCGGTTCCTGGTGTTGCCCATATGCAGTGTAATGATGTGTGGACTCAATCGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029416.14 |
||
| CDS-3UTR GCA 90 bp | ACATTAATGGAGACTGGTGATTTCTCTTCAGCTTTCACTTCTCTTGGTGATGATCGATGGAACAGCACCTaGCCTGTAGCCATCGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: TLMETGDFSSAFTSLGDDRWNST*PVAIAT Trigger: GGTGGCGATGGCTACAGGGCAGGTGCTGTTCCATCG...ATCATCACCAAGAGAAGTGAAAGCTGAAGAGAAATCACCAGTCTCCATTAATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| CDS-3UTR GCA 90 bp | GAGTCCACACATCATTACACTGCATATGGGCAACACCAGGAACCGCTGCAGTGTCAAGGGAATTTGAAGTaGTCTAGCTGCAAGGTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: ESTHHYTAYGQHQEPLQCQGNLK*SSCKVD Trigger: ATCTACCTTGCAGCTAGAGCACTTCAAATTCCCTTG...ACACTGCAGCGGTTCCTGGTGTTGCCCATATGCAGTGTAATGATGTGTGGACTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029416.14 |
||
| CDS-3UTR CCA 90 bp | GAGTCCACACATCATTACACTGCATATGGGCAACACCAGGAACCGCTGCAGTGTAACTGGCGGAGGTGGTaGAATACATTAATCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: ESTHHYTAYGQHQEPLQCNWRRW*NTLITS Trigger: AGATGTGATTAATGTATTCCACCACCTCCGCCAGTT...ACACTGCAGCGGTTCCTGGTGTTGCCCATATGCAGTGTAATGATGTGTGGACTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029416.14 ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| CDS-3UTR CCA 90 bp | ACCCCGACAGAACTAGAAGACGCTGCCAGATGGGTATGGACCACTTCAGTGAATAACTGGCGGAGGTGGTaGAATACATTAATCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: TPTELEDAARWVWTTSVNNWRRW*NTLITS Trigger: AGATGTGATTAATGTATTCCACCACCTCCGCCAGTT...ATTCACTGAAGTGGTCCATACCCATCTGGCAGCGTCTTCTAGTTCTGTCGGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154585.8 |
||
| CDS-3UTR CCA 90 bp | CTTCTTGGGCTGTGTGATCTGGAACGGGACCTGGTTCTTGACCTTGATCTACTACTTTTTCCTCTTAACTaGCGGAGGTGGTGGAATACA | + |
|
Preference number: 4 (lower is better) Translates to: LLGLCDLERDLVLDLDLLLFPLN*RRWWNT Trigger: TGTATTCCACCACCTCCGCCAGTTAAGAGGAAAAAG...TAGTAGATCAAGGTCAAGAACCAGGTCCCGTTCCAGATCACACAGCCCAAGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| CDS-3UTR CCA 90 bp | GAGTCCACACATCATTACACTGCATATGGGCAACACCAGGAACCGCTGCAGTGTGAATCTCCTCTTCTGTaGTACCAAACAGAAGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: ESTHHYTAYGQHQEPLQCESPLL*YQTEET Trigger: GGTTTCTTCTGTTTGGTACCACAGAAGAGGAGATTC...ACACTGCAGCGGTTCCTGGTGTTGCCCATATGCAGTGTAATGATGTGTGGACTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029416.14 |
||
| CDS-3UTR TCA 90 bp | ACATTAATGGAGACTGGTGATTTCTCTTCAGCTTTCACTTCTCTTGGTGATGATGCGAGTGGTCGATGGTaGGCGACACCTCCGAATACA | + |
|
Preference number: 4 (lower is better) Translates to: TLMETGDFSSAFTSLGDDASGRW*ATPPNT Trigger: TGTATTCGGAGGTGTCGCTCACCATCGACCACTCGC...ATCATCACCAAGAGAAGTGAAAGCTGAAGAGAAATCACCAGTCTCCATTAATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| CDS-3UTR TCA 90 bp | TCGATTGAGTCCACACATCATTACACTGCATATGGGCAACACCAGGAACCGCTGTCTATGCAGATTTCCTaGATCTCCTCTTCTGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SIESTHHYTAYGQHQEPLSMQIS*ISSSVV Trigger: TACCACAGAAGAGGAGATTCAGGAAATCTGCATAGA...CAGCGGTTCCTGGTGTTGCCCATATGCAGTGTAATGATGTGTGGACTCAATCGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029416.14 |
||
| CDS-3UTR GCA 90 bp | TCAAGATTCAATCCCTTTGCTTTTAACTTGGCTTCCTGTAAGGCTACTTTTCTTCGATGGAACAGCACCTaGCCTGTAGCCATCGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: SRFNPFAFNLASCKATFLRWNST*PVAIAT Trigger: GGTGGCGATGGCTACAGGGCAGGTGCTGTTCCATCG...AAGAAAAGTAGCCTTACAGGAAGCCAAGTTAAAAGCAAAGGGATTGAATCTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| CDS-3UTR CCA 90 bp | TTTCGATTGAGTCCACACATCATTACACTGCATATGGGCAACACCAGGAACCGCCTTTTTCCTCTTAACTaGCGGAGGTGGTGGAATACA | + |
|
Preference number: 4 (lower is better) Translates to: FRLSPHIITLHMGNTRNRLFPLN*RRWWNT Trigger: TGTATTCCACCACCTCCGCCAGTTAAGAGGAAAAAG...GCGGTTCCTGGTGTTGCCCATATGCAGTGTAATGATGTGTGGACTCAATCGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029416.14 ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| 3UTR CAA 72 bp | GGCTTTCACTGTGACTGCGAGACCTGCTTCTTGATCTaGAGCTGTATGTTCCAGATCGACTTCGCCTATTAT | + |
|
Preference number: 4 (lower is better) Translates to: GFHCDCETCFLI*SCMFQIDFAYY Trigger: ATAATAGGCGAAGTCGATCTGGAACATACAGCTCAAGATCAAGAAGCAGGTCTCGCAGTCACAGTGAAAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| CDS-3UTR TCA 90 bp | TTCCAGCAATTCATAGTTAGGCTTTTTCCTGGTATAAAGTCTAAGCGTCTCTATGCGAGTGGTCGATGGTaGGCGACACCTCCGAATACA | + |
|
Preference number: 4 (lower is better) Translates to: FQQFIVRLFPGIKSKRLYASGRW*ATPPNT Trigger: TGTATTCGGAGGTGTCGCTCACCATCGACCACTCGC...ATAGAGACGCTTAGACTTTATACCAGGAAAAAGCCTAACTATGAATTGCTGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| CDS-3UTR TCA 90 bp | TTTCGATTGAGTCCACACATCATTACACTGCATATGGGCAACACCAGGAACCGCCGCTTCTTCGATTTTTaGCGCAAGATTAATACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: FRLSPHIITLHMGNTRNRRFFDF*RKINTG Trigger: GCCTGTATTAATCTTGCGTCAAAAATCGAAGAAGCG...GCGGTTCCTGGTGTTGCCCATATGCAGTGTAATGATGTGTGGACTCAATCGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029416.14 ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| CDS-3UTR TCA 90 bp | TTTCGATTGAGTCCACACATCATTACACTGCATATGGGCAACACCAGGAACCGCTCTTATGGGGATGCTTaGCATGAACACAAAATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FRLSPHIITLHMGNTRNRSYGDA*HEHKIP Trigger: TGGGATTTTGTGTTCATGTCAAGCATCCCCATAAGA...GCGGTTCCTGGTGTTGCCCATATGCAGTGTAATGATGTGTGGACTCAATCGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029416.14 |
||
| 3UTR CAA 72 bp | TTCCAGATCGACTTCGCCTATTATTATAATGTCTTCTaGGGCTGTGTGATCTGGAACGGGACCTGGTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FQIDFAYYYNVF*GCVIWNGTWFL Trigger: CAAGAACCAGGTCCCGTTCCAGATCACACAGCCCAAGAAGACATTATAATAATAGGCGAAGTCGATCTGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGAGAAAATCCACCAAGAGTTGAAAGGGCTGGAGTTCCATCAAGATTCAATCTTTTTCCTCTTAACTaGCGGAGGTGGTGGAATACA | + |
|
Preference number: 4 (lower is better) Translates to: AGENPPRVERAGVPSRFNLFPLN*RRWWNT Trigger: TGTATTCCACCACCTCCGCCAGTTAAGAGGAAAAAG...ATTGAATCTTGATGGAACTCCAGCCCTTTCAACTCTTGGTGGATTTTCTCCAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| CDS-3UTR CCA 90 bp | GCTTCTCCTTGGGGATTTCGATACTTCACTCACTGTTGCCATGACGACAGCTTCTTTGGTAAATGTAGCTaGTCGCTTTTTCCTCTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: ASPWGFRYFTHCCHDDSFFGKCS*SLFPLN Trigger: GTTAAGAGGAAAAAGCGACCAGCTACATTTACCAAA...GAAGCTGTCGTCATGGCAACAGTGAGTGAAGTATCGAAATCCCCAAGGAGAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129002.8 |
||
| CDS-3UTR CCA 90 bp | AGAACTAGAAGACGCTGCCAGATGGGTATGGACCACTTCAGTGAATCTCGGATGTTTGGTAAATGTAGCTaGTCGCTTTTTCCTCTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: RTRRRCQMGMDHFSESRMFGKCS*SLFPLN Trigger: GTTAAGAGGAAAAAGCGACCAGCTACATTTACCAAA...CATCCGAGATTCACTGAAGTGGTCCATACCCATCTGGCAGCGTCTTCTAGTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000145186.8 ENSMUST00000154585.8 |
||
| 3UTR CAA 72 bp | TGCAAGGTAGATACAAGCACATGCTATAGTCTCTGGTaGAAAGCGAACAAAGACATTGGTTCGAAGACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: CKVDTSTCYSLW*KANKDIGSKTV Trigger: GACAGTCTTCGAACCAATGTCTTTGTTCGCTTTCAACCAGAGACTATAGCATGTGCTTGTATCTACCTTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000144810.8 ENSMUST00000154585.8 |
||
| CDS-3UTR GCA 90 bp | GCCCATGCAGACAAACCAGTGTTAGGAAAGTATTCACCATCATTTAAACAAATAGGGCTTTTTGACGCCTaGTGTCTATCCTCAGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AHADKPVLGKYSPSFKQIGLFDA*CLSSGS Trigger: AGAACCTGAGGATAGACAGCAGGCGTCAAAAAGCCC...TATTTGTTTAAATGATGGTGAATACTTTCCTAACACTGGTTTGTCTGCATGGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029416.14 |
||
| CDS-3UTR GCA 90 bp | GCCCATGCAGACAAACCAGTGTTAGGAAAGTATTCACCATCATTTAAACAAATAGGCTTTCACTGTGACTaGGAGACCTGCTTCTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: AHADKPVLGKYSPSFKQIGFHCD*ETCFLI Trigger: GATCAAGAAGCAGGTCTCGCAGTCACAGTGAAAGCC...TATTTGTTTAAATGATGGTGAATACTTTCCTAACACTGGTTTGTCTGCATGGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029416.14 |
||
| CDS-3UTR GCA 90 bp | CATGCAGACAAACCAGTGTTAGGAAAGTATTCACCATCATTTAAACAAATAACCAGTGATCCCGAGTCTTaGTCTGAGATCGAGACCGAG | + |
|
Preference number: 4 (lower is better) Translates to: HADKPVLGKYSPSFKQITSDPES*SEIETE Trigger: CTCGGTCTCGATCTCAGAGCAAGACTCGGGATCACT...GGTTATTTGTTTAAATGATGGTGAATACTTTCCTAACACTGGTTTGTCTGCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029416.14 |
||
| CDS-3UTR GCA 90 bp | GCCCATGCAGACAAACCAGTGTTAGGAAAGTATTCACCATCATTTAAACAAATATGCCACCATGGTGCTTaGCTTTATGGGACCTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: AHADKPVLGKYSPSFKQICHHGA*LYGTSQ Trigger: TTGAGAGGTCCCATAAAGGCAAGCACCATGGTGGCA...TATTTGTTTAAATGATGGTGAATACTTTCCTAACACTGGTTTGTCTGCATGGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029416.14 |
||
| CDS-3UTR CCA 90 bp | CATGCAGACAAACCAGTGTTAGGAAAGTATTCACCATCATTTAAACAAATAACCTTGGGCTGTGTGATCTaGAACGGGACCTGGTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HADKPVLGKYSPSFKQITLGCVI*NGTWFL Trigger: CAAGAACCAGGTCCCGTTCCAGATCACACAGCCCAA...GGTTATTTGTTTAAATGATGGTGAATACTTTCCTAACACTGGTTTGTCTGCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029416.14 |
||
| 3UTR CAA 72 bp | TTGAAAGGGCTGGAGTTCCATCAAGATTCAATCCCTTaGCTTTTAACTTGGCTTCCTGTAAGGCTACTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LKGLEFHQDSIP*LLTWLPVRLLF Trigger: GAAAAGTAGCCTTACAGGAAGCCAAGTTAAAAGCAAAGGGATTGAATCTTGATGGAACTCCAGCCCTTTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000144810.8 ENSMUST00000154585.8 |
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| 3UTR CAA 72 bp | CTTTTTGACGCCTGCTGTCTATCCTCAGGTTCTTTTTaGACTGTCTTCACATTAATGGAGACTGGTGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: LFDACCLSSGSF*TVFTLMETGDF Trigger: GAAATCACCAGTCTCCATTAATGTGAAGACAGTCAAAAAAGAACCTGAGGATAGACAGCAGGCGTCAAAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
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| CDS-3UTR TCA 90 bp | CATGCAGACAAACCAGTGTTAGGAAAGTATTCACCATCATTTAAACAAATAACCGTTGGCAAGGGAATTTaGAGTGCTCTAGCTGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: HADKPVLGKYSPSFKQITVGKGI*SALAAR Trigger: CCTTGCAGCTAGAGCACTTCAAATTCCCTTGCCAAC...GGTTATTTGTTTAAATGATGGTGAATACTTTCCTAACACTGGTTTGTCTGCATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029416.14 |
||
| CDS-3UTR TCA 90 bp | ACATTAATGGAGACTGGTGATTTCTCTTCAGCTTTCACTTCTCTTGGTGATGATCGCTTCTTCGATTTTTaGCGCAAGATTAATACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TLMETGDFSSAFTSLGDDRFFDF*RKINTG Trigger: GCCTGTATTAATCTTGCGTCAAAAATCGAAGAAGCG...ATCATCACCAAGAGAAGTGAAAGCTGAAGAGAAATCACCAGTCTCCATTAATGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| CDS-3UTR TCA 90 bp | CATGCAGACAAACCAGTGTTAGGAAAGTATTCACCATCATTTAAACAAATAACCATTGTAAGGGCTTTTTaGCGCCTGCTGTCTATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: HADKPVLGKYSPSFKQITIVRAF*RLLSIL Trigger: GAGGATAGACAGCAGGCGTCAAAAAGCCCTTACAAT...GGTTATTTGTTTAAATGATGGTGAATACTTTCCTAACACTGGTTTGTCTGCATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029416.14 |
||
| CDS-3UTR TCA 90 bp | GCCCATGCAGACAAACCAGTGTTAGGAAAGTATTCACCATCATTTAAACAAATACGCTTCTTCGATTTTTaGCGCAAGATTAATACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: AHADKPVLGKYSPSFKQIRFFDF*RKINTG Trigger: GCCTGTATTAATCTTGCGTCAAAAATCGAAGAAGCG...TATTTGTTTAAATGATGGTGAATACTTTCCTAACACTGGTTTGTCTGCATGGGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029416.14 ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| CDS-3UTR TCA 90 bp | CATGCAGACAAACCAGTGTTAGGAAAGTATTCACCATCATTTAAACAAATAACCTTTCTTGGTAACATCTaGGTGATCCCGAGTCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HADKPVLGKYSPSFKQITFLGNI*VIPSLA Trigger: AGCAAGACTCGGGATCACTCAGATGTTACCAAGAAA...GGTTATTTGTTTAAATGATGGTGAATACTTTCCTAACACTGGTTTGTCTGCATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029416.14 |
||
| CDS-3UTR CCA 90 bp | GCCCATGCAGACAAACCAGTGTTAGGAAAGTATTCACCATCATTTAAACAAATACTTAACTGGCGGAGGTaGTGGAATACATTAATCACA | + |
|
Preference number: 4 (lower is better) Translates to: AHADKPVLGKYSPSFKQILNWRR*WNTLIT Trigger: TGTGATTAATGTATTCCACCACCTCCGCCAGTTAAG...TATTTGTTTAAATGATGGTGAATACTTTCCTAACACTGGTTTGTCTGCATGGGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029416.14 ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| CDS-3UTR TCA 90 bp | CATGCAGACAAACCAGTGTTAGGAAAGTATTCACCATCATTTAAACAAATAACCGCTATAGTCTCTGGTTaGAAGCGAACAAAGACATTG | + |
|
Preference number: 4 (lower is better) Translates to: HADKPVLGKYSPSFKQITAIVSG*KRTKTL Trigger: CAATGTCTTTGTTCGCTTTCAACCAGAGACTATAGC...GGTTATTTGTTTAAATGATGGTGAATACTTTCCTAACACTGGTTTGTCTGCATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029416.14 |
||
| CDS-3UTR CCA 90 bp | TCAAGATTCAATCCCTTTGCTTTTAACTTGGCTTCCTGTAAGGCTACTTTTCTTTTTGGTAAATGTAGCTaGTCGCTTTTTCCTCTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: SRFNPFAFNLASCKATFLFGKCS*SLFPLN Trigger: GTTAAGAGGAAAAAGCGACCAGCTACATTTACCAAA...AAGAAAAGTAGCCTTACAGGAAGCCAAGTTAAAAGCAAAGGGATTGAATCTTGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| CDS-3UTR CCA 90 bp | TTCCAGCAATTCATAGTTAGGCTTTTTCCTGGTATAAAGTCTAAGCGTCTCTATTTTGGTAAATGTAGCTaGTCGCTTTTTCCTCTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: FQQFIVRLFPGIKSKRLYFGKCS*SLFPLN Trigger: GTTAAGAGGAAAAAGCGACCAGCTACATTTACCAAA...ATAGAGACGCTTAGACTTTATACCAGGAAAAAGCCTAACTATGAATTGCTGGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| CDS CCA 90 bp | GGCGGTCGCCGATCAGGATCCCTCCGGTCGTGGTCGTCGTCGTGGTaGTCGTGCCGGAGCTGGAGCCGCCCGCGCTCGGGGCGGCGGACG | + |
|
Preference number: 5 (lower is better) Translates to: GGRRSGSLRSWSSSW*SCRSWSRPRSGRRT Trigger: CGTCCGCCGCCCCGAGCGCGGGCGGCTCCAGCTCCGGCACGACCACCACGACGACGACCACGACCGGAGGGATCCTGATCGGCGACCGCC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029416.14 ENSMUST00000129002.8 ENSMUST00000154585.8 |
||
| CDS CCA 90 bp | ACACCTCCGAATACAGGCGGTCGCCGATCAGGATCCCTCCGGTCGTaGTCGTCGTCGTGGTGGTCGTGCCGGAGCTGGAGCCGCCCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: TPPNTGGRRSGSLRS*SSSWWSCRSWSRPR Trigger: GCGCGGGCGGCTCCAGCTCCGGCACGACCACCACGACGACGACCACGACCGGAGGGATCCTGATCGGCGACCGCCTGTATTCGGAGGTGT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029416.14 ENSMUST00000129002.8 ENSMUST00000154585.8 |
||
| CDS GCA 90 bp | CCCAAGATGCGCAGATCCGTCTCGCTGGGCAGGTCCAGGCCGTCCTaGATGGACGGGGTAGGCGAGAGCCGCTCCTCCGGGATCAGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: PKMRRSVSLGRSRPS*MDGVGESRSSGISE Trigger: CTCGCTGATCCCGGAGGAGCGGCTCTCGCCTACCCCGTCCATGCAGGACGGCCTGGACCTGCCCAGCGAGACGGATCTGCGCATCTTGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029416.14 ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| CDS-3UTR CAA 90 bp | TCGATTGAGTCCACACATCATTACACTGCATATGGGCAACACCAGGAACCGCTGCTGCCACCATGGTGCTaGCCTTTATGGGACCTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SIESTHHYTAYGQHQEPLLPPWC*PLWDLS Trigger: TGAGAGGTCCCATAAAGGCAAGCACCATGGTGGCAG...CAGCGGTTCCTGGTGTTGCCCATATGCAGTGTAATGATGTGTGGACTCAATCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029416.14 |
||
| CDS-3UTR CAA 90 bp | GAGTCCACACATCATTACACTGCATATGGGCAACACCAGGAACCGCTGCAGTGTAGTTGGCAAGGGAATTaGAAGTGCTCTAGCTGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: ESTHHYTAYGQHQEPLQCSWQGN*KCSSCK Trigger: CTTGCAGCTAGAGCACTTCAAATTCCCTTGCCAACT...ACACTGCAGCGGTTCCTGGTGTTGCCCATATGCAGTGTAATGATGTGTGGACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029416.14 |
||
| CDS-3UTR CAA 90 bp | CCATGTCCTGAGCGACTGCCACCATGGTGCTTGCCTTTATGGGACCTCTCAAAGCATCTCTTATTCTTCTaGGCGCTTCTTCGATTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: PCPERLPPWCLPLWDLSKHLLFF*ALLRFL Trigger: CAAAAATCGAAGAAGCGCCAAGAAGAATAAGAGATG...CTTTGAGAGGTCCCATAAAGGCAAGCACCATGGTGGCAGTCGCTCAGGACATGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| CDS-3UTR CAA 90 bp | TCGATTGAGTCCACACATCATTACACTGCATATGGGCAACACCAGGAACCGCTGCATTGTAAGGGCTTTTaGACGCCTGCTGTCTATCCT | + |
|
Preference number: 5 (lower is better) Translates to: SIESTHHYTAYGQHQEPLHCKGF*TPAVYP Trigger: AGGATAGACAGCAGGCGTCAAAAAGCCCTTACAATG...CAGCGGTTCCTGGTGTTGCCCATATGCAGTGTAATGATGTGTGGACTCAATCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029416.14 |
||
| CDS-3UTR CAA 90 bp | GACTGCGAGACCTGCTTCTTGATCTTGAGCTGTATGTTCCAGATCGACTTCGCCCATCTCTTATTCTTCTaGGCGCTTCTTCGATTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: DCETCFLILSCMFQIDFAHLLFF*ALLRFL Trigger: CAAAAATCGAAGAAGCGCCAAGAAGAATAAGAGATG...GGCGAAGTCGATCTGGAACATACAGCTCAAGATCAAGAAGCAGGTCTCGCAGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
||
| CDS-3UTR CAA 90 bp | TTTCGATTGAGTCCACACATCATTACACTGCATATGGGCAACACCAGGAACCGCCCCTTTGCTTTTAACTaGGCTTCCTGTAAGGCTACT | + |
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Preference number: 5 (lower is better) Translates to: FRLSPHIITLHMGNTRNRPFAFN*ASCKAT Trigger: AGTAGCCTTACAGGAAGCCAAGTTAAAAGCAAAGGG...GCGGTTCCTGGTGTTGCCCATATGCAGTGTAATGATGTGTGGACTCAATCGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029416.14 |
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| CDS-3UTR CAA 90 bp | GAGTCCACACATCATTACACTGCATATGGGCAACACCAGGAACCGCTGCAGTGTCAAGATTCAATCCCTTaGCTTTTAACTTGGCTTCCT | + |
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Preference number: 5 (lower is better) Translates to: ESTHHYTAYGQHQEPLQCQDSIP*LLTWLP Trigger: AGGAAGCCAAGTTAAAAGCAAAGGGATTGAATCTTG...ACACTGCAGCGGTTCCTGGTGTTGCCCATATGCAGTGTAATGATGTGTGGACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029416.14 |
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| CDS-3UTR CAA 90 bp | TCGATTGAGTCCACACATCATTACACTGCATATGGGCAACACCAGGAACCGCTGTATTATAATGTCTTCTaGGGCTGTGTGATCTGGAAC | + |
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Preference number: 5 (lower is better) Translates to: SIESTHHYTAYGQHQEPLYYNVF*GCVIWN Trigger: GTTCCAGATCACACAGCCCAAGAAGACATTATAATA...CAGCGGTTCCTGGTGTTGCCCATATGCAGTGTAATGATGTGTGGACTCAATCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029416.14 |
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| CDS-3UTR CAA 90 bp | TCGATTGAGTCCACACATCATTACACTGCATATGGGCAACACCAGGAACCGCTGTCCTCAGGTTCTTTTTaGACTGTCTTCACATTAATG | + |
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Preference number: 5 (lower is better) Translates to: SIESTHHYTAYGQHQEPLSSGSF*TVFTLM Trigger: CATTAATGTGAAGACAGTCAAAAAAGAACCTGAGGA...CAGCGGTTCCTGGTGTTGCCCATATGCAGTGTAATGATGTGTGGACTCAATCGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029416.14 |
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| CDS-3UTR CAA 90 bp | GCCCATGCAGACAAACCAGTGTTAGGAAAGTATTCACCATCATTTAAACAAATAACCAATGGGGCCGAGTaGGCAAGGGAATTTGAAGTG | + |
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Preference number: 5 (lower is better) Translates to: AHADKPVLGKYSPSFKQITNGAE*AREFEV Trigger: CACTTCAAATTCCCTTGCCAACTCGGCCCCATTGGT...TATTTGTTTAAATGATGGTGAATACTTTCCTAACACTGGTTTGTCTGCATGGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029416.14 |
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| CDS-3UTR CAA 90 bp | GCCCATGCAGACAAACCAGTGTTAGGAAAGTATTCACCATCATTTAAACAAATACAAGGATCAGGGGGCTaGGAGTCCTTTTTCCTCTTA | + |
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Preference number: 5 (lower is better) Translates to: AHADKPVLGKYSPSFKQIQGSGG*ESFFLL Trigger: TAAGAGGAAAAAGGACTCCAAGCCCCCTGATCCTTG...TATTTGTTTAAATGATGGTGAATACTTTCCTAACACTGGTTTGTCTGCATGGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029416.14 |
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| CDS-3UTR CAA 90 bp | GCTGTATGTTCCAGATCGACTTCGCCTATTATTATAATGTCTTCTTGGGCTGTGCATCTCTTATTCTTCTaGGCGCTTCTTCGATTTTTG | + |
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Preference number: 5 (lower is better) Translates to: AVCSRSTSPIIIMSSWAVHLLFF*ALLRFL Trigger: CAAAAATCGAAGAAGCGCCAAGAAGAATAAGAGATG...CACAGCCCAAGAAGACATTATAATAATAGGCGAAGTCGATCTGGAACATACAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
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| CDS-3UTR CAA 90 bp | GCCCATGCAGACAAACCAGTGTTAGGAAAGTATTCACCATCATTTAAACAAATAGTAATTCCAGGCAGTTaGAACCAGGGTTTGGTTACG | + |
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Preference number: 5 (lower is better) Translates to: AHADKPVLGKYSPSFKQIVIPGS*NQGLVT Trigger: CGTAACCAAACCCTGGTTCAAACTGCCTGGAATTAC...TATTTGTTTAAATGATGGTGAATACTTTCCTAACACTGGTTTGTCTGCATGGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029416.14 |
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| CDS-3UTR CAA 90 bp | GCCCATGCAGACAAACCAGTGTTAGGAAAGTATTCACCATCATTTAAACAAATAAAAATCCACCAAGAGTaGAAAGGGCTGGAGTTCCAT | + |
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Preference number: 5 (lower is better) Translates to: AHADKPVLGKYSPSFKQIKIHQE*KGLEFH Trigger: ATGGAACTCCAGCCCTTTCAACTCTTGGTGGATTTT...TATTTGTTTAAATGATGGTGAATACTTTCCTAACACTGGTTTGTCTGCATGGGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029416.14 |
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| CDS-3UTR CAA 90 bp | CATGCAGACAAACCAGTGTTAGGAAAGTATTCACCATCATTTAAACAAATAACCTGCGAGACCTGCTTCTaGATCTTGAGCTGTATGTTC | + |
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Preference number: 5 (lower is better) Translates to: HADKPVLGKYSPSFKQITCETCF*ILSCMF Trigger: GAACATACAGCTCAAGATCAAGAAGCAGGTCTCGCA...GGTTATTTGTTTAAATGATGGTGAATACTTTCCTAACACTGGTTTGTCTGCATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029416.14 |
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| CDS-3UTR CAA 90 bp | CATGCAGACAAACCAGTGTTAGGAAAGTATTCACCATCATTTAAACAAATAACCACCTGCTTCTTGATCTaGAGCTGTATGTTCCAGATC | + |
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Preference number: 5 (lower is better) Translates to: HADKPVLGKYSPSFKQITTCFLI*SCMFQI Trigger: GATCTGGAACATACAGCTCAAGATCAAGAAGCAGGT...GGTTATTTGTTTAAATGATGGTGAATACTTTCCTAACACTGGTTTGTCTGCATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029416.14 |
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| CDS-3UTR CAA 90 bp | CATGCAGACAAACCAGTGTTAGGAAAGTATTCACCATCATTTAAACAAATAACCAAGCGAACAAAGACATaGGTTCGAAGACTGTCATTC | + |
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Preference number: 5 (lower is better) Translates to: HADKPVLGKYSPSFKQITKRTKT*VRRLSF Trigger: GAATGACAGTCTTCGAACCAATGTCTTTGTTCGCTT...GGTTATTTGTTTAAATGATGGTGAATACTTTCCTAACACTGGTTTGTCTGCATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029416.14 |
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| CDS-3UTR CAA 90 bp | CATGCAGACAAACCAGTGTTAGGAAAGTATTCACCATCATTTAAACAAATAACCCATCTCTTATTCTTCTaGGCGCTTCTTCGATTTTTG | + |
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Preference number: 5 (lower is better) Translates to: HADKPVLGKYSPSFKQITHLLFF*ALLRFL Trigger: CAAAAATCGAAGAAGCGCCAAGAAGAATAAGAGATG...GGTTATTTGTTTAAATGATGGTGAATACTTTCCTAACACTGGTTTGTCTGCATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029416.14 ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
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| CDS CCA 72 bp | CGGTCGTGGTCGTCGTCGTGGTGGTCGTGCCGGAGCTaGAGCCGCCCGCGCTCGGGGCGGCGGACGAGGCGG | + |
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Preference number: 6 (lower is better) Translates to: RSWSSSWWSCRS*SRPRSGRRTRR Trigger: CCGCCTCGTCCGCCGCCCCGAGCGCGGGCGGCTCCAGCTCCGGCACGACCACCACGACGACGACCACGACCG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029416.14 ENSMUST00000129002.8 ENSMUST00000154585.8 |
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| CDS CCA 72 bp | CGCCGATCAGGATCCCTCCGGTCGTGGTCGTCGTCGTaGTGGTCGTGCCGGAGCTGGAGCCGCCCGCGCTCG | + |
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Preference number: 6 (lower is better) Translates to: RRSGSLRSWSSS*WSCRSWSRPRS Trigger: CGAGCGCGGGCGGCTCCAGCTCCGGCACGACCACCACGACGACGACCACGACCGGAGGGATCCTGATCGGCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029416.14 ENSMUST00000129002.8 ENSMUST00000154585.8 |
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| CDS GCA 72 bp | CGCAGATCCGTCTCGCTGGGCAGGTCCAGGCCGTCCTaGATGGACGGGGTAGGCGAGAGCCGCTCCTCCGGG | + |
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Preference number: 6 (lower is better) Translates to: RRSVSLGRSRPS*MDGVGESRSSG Trigger: CCCGGAGGAGCGGCTCTCGCCTACCCCGTCCATGCAGGACGGCCTGGACCTGCCCAGCGAGACGGATCTGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029416.14 ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
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| CDS CCA 72 bp | AATACAGGCGGTCGCCGATCAGGATCCCTCCGGTCGTaGTCGTCGTCGTGGTGGTCGTGCCGGAGCTGGAGC | + |
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Preference number: 6 (lower is better) Translates to: NTGGRRSGSLRS*SSSWWSCRSWS Trigger: GCTCCAGCTCCGGCACGACCACCACGACGACGACCACGACCGGAGGGATCCTGATCGGCGACCGCCTGTATT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029416.14 ENSMUST00000129002.8 ENSMUST00000154585.8 |
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| CDS TCA 72 bp | AGAGCCGCTCCTCCGGGATCAGCGAGTGGTCGATGGTaGGCGACACCTCCGAATACAGGCGGTCGCCGATCA | + |
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Preference number: 6 (lower is better) Translates to: RAAPPGSASGRW*ATPPNTGGRRS Trigger: TGATCGGCGACCGCCTGTATTCGGAGGTGTCGCTCACCATCGACCACTCGCTGATCCCGGAGGAGCGGCTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029416.14 ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
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| CDS CCA 72 bp | AGGATCAGGGGGCTTGGAGTCCTTTTTCCTCTTAACTaGCGGAGGTGGTGGAATACATTAATCACATCTCTT | + |
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Preference number: 6 (lower is better) Translates to: RIRGLGVLFPLN*RRWWNTLITSL Trigger: AAGAGATGTGATTAATGTATTCCACCACCTCCGCCAGTTAAGAGGAAAAAGGACTCCAAGCCCCCTGATCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029416.14 |
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| CDS CCA 72 bp | TTTGGTAAATGTAGCTGGTCGCTTTTTCCTCTTAACTaGCGGAGGTGGTGGAATACATTAATCACATCTCTT | + |
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Preference number: 6 (lower is better) Translates to: FGKCSWSLFPLN*RRWWNTLITSL Trigger: AAGAGATGTGATTAATGTATTCCACCACCTCCGCCAGTTAAGAGGAAAAAGCGACCAGCTACATTTACCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
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| CDS TCA 72 bp | CACATCTCTTATTCTTCTTGGCGCTTCTTCGATTTTTaGCGCAAGATTAATACAGGCCATAGCAACAATCTC | + |
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Preference number: 6 (lower is better) Translates to: HISYSSWRFFDF*RKINTGHSNNL Trigger: GAGATTGTTGCTATGGCCTGTATTAATCTTGCGTCAAAAATCGAAGAAGCGCCAAGAAGAATAAGAGATGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000029416.14 ENSMUST00000129002.8 ENSMUST00000135719.8 ENSMUST00000154585.8 |
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