Pregenerated sensors for CCNK (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021258Ensembl transcript IDs: ENSMUST00000101055.5, ENSMUST00000221167.2
Found 206 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | CTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCACACTaGAACTGTCTAGCATATACAAGGCGCCCTGCTGCCGCCCCCTCA | + |
Preference number: 1 (lower is better) Translates to: LPRAHSSCQGPALPH*NCLAYTRRPAAAPS Trigger: TGAGGGGGCGGCAGCAGGGCGCCTTGTATATGCTAGACAGTTGCAGTGTGGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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3UTR GCA 90 bp | CCCAGCCCTCCCACACTGCAACTGTCTAGCATATACAAGGCGCCCTaGTGCCGCCCCCTCAGTCTATTCTTCAAGTTGGTTGGAAAACAA | + |
Preference number: 1 (lower is better) Translates to: PSPPTLQLSSIYKAP*CRPLSLFFKLVGKQ Trigger: TTGTTTTCCAACCAACTTGAAGAATAGACTGAGGGGGCGGCAGCAGGGCGCCTTGTATATGCTAGACAGTTGCAGTGTGGGAGGGCTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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3UTR GCA 90 bp | AGCCCTCCCACACTGCAACTGTCTAGCATATACAAGGCGCCCTGCTaGCGCCCCCTCAGTCTATTCTTCAAGTTGGTTGGAAAACAATTC | + |
Preference number: 1 (lower is better) Translates to: SPPTLQLSSIYKAPC*RPLSLFFKLVGKQF Trigger: GAATTGTTTTCCAACCAACTTGAAGAATAGACTGAGGGGGCGGCAGCAGGGCGCCTTGTATATGCTAGACAGTTGCAGTGTGGGAGGGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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3UTR-3UTR TCA 90 bp | AGAGGACAGAGTTACAAGCTAAGTGGGGAGTCACCTCACCTACTAGGGGCCACAAGCGGGGACTGGATGTaGTCACACCACAGCAGGCAC | + |
Preference number: 2 (lower is better) Translates to: RGQSYKLSGESPHLLGATSGDWM*SHHSRH Trigger: GTGCCTGCTGTGGTGTGATCACATCCAGTCCCCGCT...TGTGGCCCCTAGTAGGTGAGGTGACTCCCCACTTAGCTTGTAACTCTGTCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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3UTR-3UTR GCA 90 bp | TCCTTACTGAAGCTATTAACTGAGCCAATGTGGCTACTTAACATCTTCACTAGTATTAAAGTAGCCCCGTaGAGGACACAGACGGCAGCG | + |
Preference number: 2 (lower is better) Translates to: SLLKLLTEPMWLLNIFTSIKVAP*RTQTAA Trigger: CGCTGCCGTCTGTGTCCTGCACGGGGCTACTTTAAT...ACTAGTGAAGATGTTAAGTAGCCACATTGGCTCAGTTAATAGCTTCAGTAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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3UTR CAA 90 bp | ATATCTCTCTATGTACAAGACTTTGCAAAGAGATGTAAACATACATaGTTTTCCAAGTACACACCTCCTTTCTCCATGGAGGGAAGGAGA | + |
Preference number: 2 (lower is better) Translates to: ISLYVQDFAKRCKHT*FSKYTPPFSMEGRR Trigger: TCTCCTTCCCTCCATGGAGAAAGGAGGTGTGTACTTGGAAAACAATGTATGTTTACATCTCTTTGCAAAGTCTTGTACATAGAGAGATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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3UTR GCA 72 bp | ACACCACAGCAGGCACTGCCCAGGGCACACAGTTCATaGCAGGGCCCAGCCCTCCCACACTGCAACTGTCTA | + |
Preference number: 3 (lower is better) Translates to: TPQQALPRAHSS*QGPALPHCNCL Trigger: TAGACAGTTGCAGTGTGGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTGCTGTGGTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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3UTR GCA 72 bp | GCACACAGTTCATGCCAGGGCCCAGCCCTCCCACACTaGAACTGTCTAGCATATACAAGGCGCCCTGCTGCC | + |
Preference number: 3 (lower is better) Translates to: AHSSCQGPALPH*NCLAYTRRPAA Trigger: GGCAGCAGGGCGCCTTGTATATGCTAGACAGTTGCAGTGTGGGAGGGCTGGGCCCTGGCATGAACTGTGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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3UTR GCA 72 bp | CCCACACTGCAACTGTCTAGCATATACAAGGCGCCCTaGTGCCGCCCCCTCAGTCTATTCTTCAAGTTGGTT | + |
Preference number: 3 (lower is better) Translates to: PTLQLSSIYKAP*CRPLSLFFKLV Trigger: AACCAACTTGAAGAATAGACTGAGGGGGCGGCAGCAGGGCGCCTTGTATATGCTAGACAGTTGCAGTGTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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3UTR CCA 72 bp | ATACATTGTTTTCCAAGTACACACCTCCTTTCTCCATaGAGGGAAGGAGACAGCCACCCGTCAAGGCAGCCC | + |
Preference number: 3 (lower is better) Translates to: IHCFPSTHLLSP*REGDSHPSRQP Trigger: GGGCTGCCTTGACGGGTGGCTGTCTCCTTCCCTCCATGGAGAAAGGAGGTGTGTACTTGGAAAACAATGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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3UTR GCA 72 bp | CTACTTAACATCTTCACTAGTATTAAAGTAGCCCCGTaGAGGACACAGACGGCAGCGGGGACTGGATGTGAT | + |
Preference number: 3 (lower is better) Translates to: LLNIFTSIKVAP*RTQTAAGTGCD Trigger: ATCACATCCAGTCCCCGCTGCCGTCTGTGTCCTGCACGGGGCTACTTTAATACTAGTGAAGATGTTAAGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | CAGCAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCACACCCACCACGGCGCGCTTaGCCTGTCGGGGAGGACTGG | + |
Preference number: 4 (lower is better) Translates to: QQALPRAHSSCQGPALPHPPRRA*PVGEDW Trigger: CCAGTCCTCCCCGACAGGCCAAGCGCGCCGTGGTGG...GTGTGGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTGCTG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | ACCACAGCAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCGGCAATGGTGGGGGCTaGTGCACAGGGGCCGGGTGG | + |
Preference number: 4 (lower is better) Translates to: TTAGTAQGTQFMPGPSPPGNGGG*CTGAGW Trigger: CCACCCGGCCCCTGTGCACCAGCCCCCACCATTGCC...GGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTGCTGTGGT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR GCA 90 bp | CCACAGCAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCAAATGGTGGGGGCTGGTaGACAGGGGCCGGGTGGGCT | + |
Preference number: 4 (lower is better) Translates to: PQQALPRAHSSCQGPALPNGGGW*TGAGWA Trigger: AGCCCACCCGGCCCCTGTGCACCAGCCCCCACCATT...TGGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTGCTGTGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | CCACAGCAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCAGGAGGGTGGCGGGGGTaGTGGCCGATGTGGCAATGG | + |
Preference number: 4 (lower is better) Translates to: PQQALPRAHSSCQGPALPGGWRG*WPMWQW Trigger: CCATTGCCACATCGGCCACCACCCCCGCCACCCTCC...TGGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTGCTGTGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | CAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCACACTGCCATGTAGCTGGAGGGTaGCGGGGGTGGTGGCCGATG | + |
Preference number: 4 (lower is better) Translates to: QALPRAHSSCQGPALPHCHVAGG*RGWWPM Trigger: CATCGGCCACCACCCCCGCCACCCTCCAGCTACATG...GCAGTGTGGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | CAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCACACTGCAGGTGGGCCGTAGGCTaGGGGCAGGGCACCATAGGA | + |
Preference number: 4 (lower is better) Translates to: QALPRAHSSCQGPALPHCRWAVG*GQGTIG Trigger: TCCTATGGTGCCCTGCCCCCAGCCTACGGCCCACCT...GCAGTGTGGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | CCACAGCAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCAAGGGACTGCATGAGTTaGGGGCAGGCGTGGGGGTGG | + |
Preference number: 4 (lower is better) Translates to: PQQALPRAHSSCQGPALPRDCMS*GQAWGW Trigger: CCACCCCCACGCCTGCCCCCAACTCATGCAGTCCCT...TGGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTGCTGTGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | CAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCACACTGCTGGCCGATGTGGCAATaGTGGGGGCTGGTGCACAGG | + |
Preference number: 4 (lower is better) Translates to: QALPRAHSSCQGPALPHCWPMWQ*WGLVHR Trigger: CCTGTGCACCAGCCCCCACCATTGCCACATCGGCCA...GCAGTGTGGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | ACCACAGCAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCAGGTGGCATACCAGGTaGGGGGATGGGTGGGGGAAC | + |
Preference number: 4 (lower is better) Translates to: TTAGTAQGTQFMPGPSPPRWHTR*GDGWGN Trigger: GTTCCCCCACCCATCCCCCCACCTGGTATGCCACCT...GGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTGCTGTGGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR TCA 90 bp | CCACAGCAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCATGCCCACATCAAAGATaGAGCGAGCCCCCTCTCGGC | + |
Preference number: 4 (lower is better) Translates to: PQQALPRAHSSCQGPALPCPHQR*SEPPLG Trigger: GCCGAGAGGGGGCTCGCTTCATCTTTGATGTGGGCA...TGGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTGCTGTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR TCA 90 bp | CAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCACACTGCCTGTTGCTGCTGGGCTaGCTGCTGCGAGTCCTTCTG | + |
Preference number: 4 (lower is better) Translates to: QALPRAHSSCQGPALPHCLLLLG*LLRVLL Trigger: CAGAAGGACTCGCAGCAGTCAGCCCAGCAGCAACAG...GCAGTGTGGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR GCA 90 bp | CCACAGCAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCATGCTGGGCTGACTGCTaGGAGTCCTTCTGTGGAGGC | + |
Preference number: 4 (lower is better) Translates to: PQQALPRAHSSCQGPALPCWADC*ESFCGG Trigger: GCCTCCACAGAAGGACTCGCAGCAGTCAGCCCAGCA...TGGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTGCTGTGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR GCA 90 bp | ACCACAGCAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCTGCTGGGCTGACTGCTaGGAGTCCTTCTGTGGAGGC | + |
Preference number: 4 (lower is better) Translates to: TTAGTAQGTQFMPGPSPPCWADC*ESFCGG Trigger: GCCTCCACAGAAGGACTCGCAGCAGTCAGCCCAGCA...GGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTGCTGTGGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR GCA 90 bp | CCTCCCACACTGCAACTGTCTAGCATATACAAGGCGCCCTGCTGCCGCCCCCTCAATGGTGGGGGCTGGTaGACAGGGGCCGGGTGGGCT | + |
Preference number: 4 (lower is better) Translates to: PPTLQLSSIYKAPCCRPLNGGGW*TGAGWA Trigger: AGCCCACCCGGCCCCTGTGCACCAGCCCCCACCATT...GAGGGGGCGGCAGCAGGGCGCCTTGTATATGCTAGACAGTTGCAGTGTGGGAGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | CAGCAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCACACCTTCCGGTCTGGAGGTaGGTGTGCTGGAGGCAATGG | + |
Preference number: 4 (lower is better) Translates to: QQALPRAHSSCQGPALPHLPVWR*VCWRQW Trigger: CCATTGCCTCCAGCACACCCACCTCCAGACCGGAAG...GTGTGGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTGCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | CACAGACGGCAGCGGGGACTGGATGTGATCACACCACAGCAGGCACTGCCCAGGTCCCCGTCATGTAGCTaGAGGGTGGCGGGGGTGGTG | + |
Preference number: 4 (lower is better) Translates to: HRRQRGLDVITPQQALPRSPSCS*RVAGVV Trigger: CACCACCCCCGCCACCCTCCAGCTACATGACGGGGA...CCTGGGCAGTGCCTGCTGTGGTGTGATCACATCCAGTCCCCGCTGCCGTCTGTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | ACCACAGCAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCAGGTGGGTAGCTGGCTaGTGGCAAACCCAAGCCTGG | + |
Preference number: 4 (lower is better) Translates to: TTAGTAQGTQFMPGPSPPRWVAG*WQTQAW Trigger: CCAGGCTTGGGTTTGCCACCAGCCAGCTACCCACCT...GGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTGCTGTGGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | CAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCACACTGCCTGGAGGTGGGTAGCTaGCTGGTGGCAAACCCAAGC | + |
Preference number: 4 (lower is better) Translates to: QALPRAHSSCQGPALPHCLEVGS*LVANPS Trigger: GCTTGGGTTTGCCACCAGCCAGCTACCCACCTCCAG...GCAGTGTGGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR TCA 90 bp | ACCACAGCAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCTGGTTCCCACTGCAGTaGCAGGGTGGTGCAGAGACT | + |
Preference number: 4 (lower is better) Translates to: TTAGTAQGTQFMPGPSPPWFPLQ*QGGAET Trigger: AGTCTCTGCACCACCCTGTCACTGCAGTGGGAACCA...GGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTGCTGTGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR TCA 90 bp | CAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCACACTGCGCTGCTTCTGAGCCTTaGGATGGTTGGGACTGTGGC | + |
Preference number: 4 (lower is better) Translates to: QALPRAHSSCQGPALPHCAASEP*DGWDCG Trigger: GCCACAGTCCCAACCATCTCAAGGCTCAGAAGCAGC...GCAGTGTGGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR GCA 90 bp | ACCACAGCAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCTGCTGCTGGGCTGACTaGTGCGAGTCCTTCTGTGGA | + |
Preference number: 4 (lower is better) Translates to: TTAGTAQGTQFMPGPSPPCCWAD*CESFCG Trigger: TCCACAGAAGGACTCGCAGCAGTCAGCCCAGCAGCA...GGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTGCTGTGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR GCA 90 bp | CAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCACACTGCGGCTGTTGTGCTTGCTaGTGTTGCTGCTGGGCTGAC | + |
Preference number: 4 (lower is better) Translates to: QALPRAHSSCQGPALPHCGCCAC*CCCWAD Trigger: GTCAGCCCAGCAGCAACAGCAGCAAGCACAACAGCC...GCAGTGTGGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | CAGCAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCACACCCGGGCCTCAGTGGCTaGATCGAGTCCTTCAAGTTG | + |
Preference number: 4 (lower is better) Translates to: QQALPRAHSSCQGPALPHPGLSG*IESFKL Trigger: CAACTTGAAGGACTCGATCCAGCCACTGAGGCCCGG...GTGTGGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | CAGCAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCACACTGGAGGTGGGTGTGCTaGAGGCAATGGTGGGTGAGT | + |
Preference number: 4 (lower is better) Translates to: QQALPRAHSSCQGPALPHWRWVC*RQWWVS Trigger: ACTCACCCACCATTGCCTCCAGCACACCCACCTCCA...GTGTGGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | CCTCCCACACTGCAACTGTCTAGCATATACAAGGCGCCCTGCTGCCGCCCCCTCCCGATGTGGCAATGGTaGGGGCTGGTGCACAGGGGC | + |
Preference number: 4 (lower is better) Translates to: PPTLQLSSIYKAPCCRPLPMWQW*GLVHRG Trigger: GCCCCTGTGCACCAGCCCCCACCATTGCCACATCGG...GAGGGGGCGGCAGCAGGGCGCCTTGTATATGCTAGACAGTTGCAGTGTGGGAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR TCA 90 bp | ACCACAGCAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCCTGATAGCCCTCTCCTaGCATGTAGGAGCTGGTGGT | + |
Preference number: 4 (lower is better) Translates to: TTAGTAQGTQFMPGPSPPLIALS*HVGAGG Trigger: ACCACCAGCTCCTACATGTCAGGAGAGGGCTATCAG...GGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTGCTGTGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR GCA 90 bp | CAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCACACTGCATCTCTGGTTCCCACTaGAGTGACAGGGTGGTGCAG | + |
Preference number: 4 (lower is better) Translates to: QALPRAHSSCQGPALPHCISGSH*SDRVVQ Trigger: CTGCACCACCCTGTCACTGCAGTGGGAACCAGAGAT...GCAGTGTGGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR GCA 90 bp | CAGCAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCACACATCTCTGGTTCCCACTaGAGTGACAGGGTGGTGCAG | + |
Preference number: 4 (lower is better) Translates to: QQALPRAHSSCQGPALPHISGSH*SDRVVQ Trigger: CTGCACCACCCTGTCACTGCAGTGGGAACCAGAGAT...GTGTGGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTGCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR GCA 90 bp | CAGCAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCACACTTGGGCTGTTGTGCTTaGTGCTGTTGCTGCTGGGCT | + |
Preference number: 4 (lower is better) Translates to: QQALPRAHSSCQGPALPHLGCCA*CCCCWA Trigger: AGCCCAGCAGCAACAGCAGCAAGCACAACAGCCCAA...GTGTGGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTGCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | CAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCACACTGCGTGTGCTGGAGGCAATaGTGGGTGAGTAGCCTCAAG | + |
Preference number: 4 (lower is better) Translates to: QALPRAHSSCQGPALPHCVCWRQ*WVSSLK Trigger: CTTGAGGCTACTCACCCACCATTGCCTCCAGCACAC...GCAGTGTGGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | CCCAGCCCTCCCACACTGCAACTGTCTAGCATATACAAGGCGCCCTGCTGCCGCTGGCCGATGTGGCAATaGTGGGGGCTGGTGCACAGG | + |
Preference number: 4 (lower is better) Translates to: PSPPTLQLSSIYKAPCCRWPMWQ*WGLVHR Trigger: CCTGTGCACCAGCCCCCACCATTGCCACATCGGCCA...GCGGCAGCAGGGCGCCTTGTATATGCTAGACAGTTGCAGTGTGGGAGGGCTGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | CCACAGCAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCATGTAGGAGCTGGTGGTaGACATCCCCGTCATGTAGC | + |
Preference number: 4 (lower is better) Translates to: PQQALPRAHSSCQGPALPCRSWW*TSPSCS Trigger: GCTACATGACGGGGATGTCCACCACCAGCTCCTACA...TGGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTGCTGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | CACAGACGGCAGCGGGGACTGGATGTGATCACACCACAGCAGGCACTGCCCAGGTGGGTAGCTGGCTGGTaGCAAACCCAAGCCTGGAGG | + |
Preference number: 4 (lower is better) Translates to: HRRQRGLDVITPQQALPRWVAGW*QTQAWR Trigger: CCTCCAGGCTTGGGTTTGCCACCAGCCAGCTACCCA...CCTGGGCAGTGCCTGCTGTGGTGTGATCACATCCAGTCCCCGCTGCCGTCTGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | CACAGACGGCAGCGGGGACTGGATGTGATCACACCACAGCAGGCACTGCCCAGGAGGTGGGTAGCTGGCTaGTGGCAAACCCAAGCCTGG | + |
Preference number: 4 (lower is better) Translates to: HRRQRGLDVITPQQALPRRWVAG*WQTQAW Trigger: CCAGGCTTGGGTTTGCCACCAGCCAGCTACCCACCT...CCTGGGCAGTGCCTGCTGTGGTGTGATCACATCCAGTCCCCGCTGCCGTCTGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | CACAGACGGCAGCGGGGACTGGATGTGATCACACCACAGCAGGCACTGCCCAGGGGTACCGGGCCTCAGTaGCTGGATCGAGTCCTTCAA | + |
Preference number: 4 (lower is better) Translates to: HRRQRGLDVITPQQALPRGTGPQ*LDRVLQ Trigger: TTGAAGGACTCGATCCAGCCACTGAGGCCCGGTACC...CCTGGGCAGTGCCTGCTGTGGTGTGATCACATCCAGTCCCCGCTGCCGTCTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | CAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCACACTGCCTTTGTTCTCTTCCTTaGGAGAAACCACCACGGCGC | + |
Preference number: 4 (lower is better) Translates to: QALPRAHSSCQGPALPHCLCSLP*EKPPRR Trigger: GCGCCGTGGTGGTTTCTCCCAAGGAAGAGAACAAAG...GCAGTGTGGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
||
CDS-3UTR CCA 90 bp | CCTCCCACACTGCAACTGTCTAGCATATACAAGGCGCCCTGCTGCCGCCCCCTCCTTCCGGTCTGGAGGTaGGTGTGCTGGAGGCAATGG | + |
Preference number: 4 (lower is better) Translates to: PPTLQLSSIYKAPCCRPLLPVWR*VCWRQW Trigger: CCATTGCCTCCAGCACACCCACCTCCAGACCGGAAG...GAGGGGGCGGCAGCAGGGCGCCTTGTATATGCTAGACAGTTGCAGTGTGGGAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | ACCACAGCAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCACATGTAGGAGCTGGTaGTGGACATCCCCGTCATGT | + |
Preference number: 4 (lower is better) Translates to: TTAGTAQGTQFMPGPSPPTCRSW*WTSPSC Trigger: ACATGACGGGGATGTCCACCACCAGCTCCTACATGT...GGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTGCTGTGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | CAGCAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCACACACATGTAGGAGCTGGTaGTGGACATCCCCGTCATGT | + |
Preference number: 4 (lower is better) Translates to: QQALPRAHSSCQGPALPHTCRSW*WTSPSC Trigger: ACATGACGGGGATGTCCACCACCAGCTCCTACATGT...GTGTGGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | CCCAGCCCTCCCACACTGCAACTGTCTAGCATATACAAGGCGCCCTGCTGCCGCTGGGTAGCTGGCTGGTaGCAAACCCAAGCCTGGAGG | + |
Preference number: 4 (lower is better) Translates to: PSPPTLQLSSIYKAPCCRWVAGW*QTQAWR Trigger: CCTCCAGGCTTGGGTTTGCCACCAGCCAGCTACCCA...GCGGCAGCAGGGCGCCTTGTATATGCTAGACAGTTGCAGTGTGGGAGGGCTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR TCA 90 bp | CCCAGCCCTCCCACACTGCAACTGTCTAGCATATACAAGGCGCCCTGCTGCCGCTGGTTCCCACTGCAGTaGCAGGGTGGTGCAGAGACT | + |
Preference number: 4 (lower is better) Translates to: PSPPTLQLSSIYKAPCCRWFPLQ*QGGAET Trigger: AGTCTCTGCACCACCCTGTCACTGCAGTGGGAACCA...GCGGCAGCAGGGCGCCTTGTATATGCTAGACAGTTGCAGTGTGGGAGGGCTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR TCA 90 bp | ACCACAGCAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCTTACTGCGACAGCTATaGTCTCTGGTTCCCACTGCA | + |
Preference number: 4 (lower is better) Translates to: TTAGTAQGTQFMPGPSPPLLRQL*SLVPTA Trigger: TGCAGTGGGAACCAGAGATCATAGCTGTCGCAGTAA...GGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTGCTGTGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR TCA 90 bp | CCCAGCCCTCCCACACTGCAACTGTCTAGCATATACAAGGCGCCCTGCTGCCGCGCTGCTTCTGAGCCTTaGGATGGTTGGGACTGTGGC | + |
Preference number: 4 (lower is better) Translates to: PSPPTLQLSSIYKAPCCRAASEP*DGWDCG Trigger: GCCACAGTCCCAACCATCTCAAGGCTCAGAAGCAGC...GCGGCAGCAGGGCGCCTTGTATATGCTAGACAGTTGCAGTGTGGGAGGGCTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR GCA 90 bp | CAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCACACTGCAGTTGTGAGGGTGTGTaGGCTAGGTCCTTCTTATCC | + |
Preference number: 4 (lower is better) Translates to: QALPRAHSSCQGPALPHCSCEGV*ARSFLS Trigger: GGATAAGAAGGACCTAGCGCACACACCCTCACAACT...GCAGTGTGGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR GCA 90 bp | CCTCCCACACTGCAACTGTCTAGCATATACAAGGCGCCCTGCTGCCGCCCCCTCGGCTGTTGTGCTTGCTaGTGTTGCTGCTGGGCTGAC | + |
Preference number: 4 (lower is better) Translates to: PPTLQLSSIYKAPCCRPLGCCAC*CCCWAD Trigger: GTCAGCCCAGCAGCAACAGCAGCAAGCACAACAGCC...GAGGGGGCGGCAGCAGGGCGCCTTGTATATGCTAGACAGTTGCAGTGTGGGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | CAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCACACTGCAGGTCCAGGATTTGGTaGCAGATGTCTTCCAGAACG | + |
Preference number: 4 (lower is better) Translates to: QALPRAHSSCQGPALPHCRSRIW*QMSSRT Trigger: CGTTCTGGAAGACATCTGCCACCAAATCCTGGACCT...GCAGTGTGGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | CCTCCCACACTGCAACTGTCTAGCATATACAAGGCGCCCTGCTGCCGCCCCCTCCCCCTGGGGCACTTGTaGTGTAGGCTGAAGAGATGG | + |
Preference number: 4 (lower is better) Translates to: PPTLQLSSIYKAPCCRPLPLGHL*CRLKRW Trigger: CCATCTCTTCAGCCTACACCACAAGTGCCCCAGGGG...GAGGGGGCGGCAGCAGGGCGCCTTGTATATGCTAGACAGTTGCAGTGTGGGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | CCACAGCAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCATGCTGGAGGCAATGGTaGGTGAGTAGCCTCAAGTTT | + |
Preference number: 4 (lower is better) Translates to: PQQALPRAHSSCQGPALPCWRQW*VSSLKF Trigger: AAACTTGAGGCTACTCACCCACCATTGCCTCCAGCA...TGGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTGCTGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | CACAGACGGCAGCGGGGACTGGATGTGATCACACCACAGCAGGCACTGCCCAGGGTGTGCTGGAGGCAATaGTGGGTGAGTAGCCTCAAG | + |
Preference number: 4 (lower is better) Translates to: HRRQRGLDVITPQQALPRVCWRQ*WVSSLK Trigger: CTTGAGGCTACTCACCCACCATTGCCTCCAGCACAC...CCTGGGCAGTGCCTGCTGTGGTGTGATCACATCCAGTCCCCGCTGCCGTCTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | CCACAGCAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCACAACATGGTTTTGTGTaGTCCAGGTTTGCTGACGTG | + |
Preference number: 4 (lower is better) Translates to: PQQALPRAHSSCQGPALPQHGFV*SRFADV Trigger: CACGTCAGCAAACCTGGACCACACAAAACCATGTTG...TGGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTGCTGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | CAGCAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCACACGGGGAATCTGGACTTTaGGGAGATCACTTGTTTCCA | + |
Preference number: 4 (lower is better) Translates to: QQALPRAHSSCQGPALPHGESGL*GDHLFP Trigger: TGGAAACAAGTGATCTCCCCAAAGTCCAGATTCCCC...GTGTGGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | CAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCACACTGCGGGGAATCTGGACTTTaGGGAGATCACTTGTTTCCA | + |
Preference number: 4 (lower is better) Translates to: QALPRAHSSCQGPALPHCGESGL*GDHLFP Trigger: TGGAAACAAGTGATCTCCCCAAAGTCCAGATTCCCC...GCAGTGTGGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | CACAGACGGCAGCGGGGACTGGATGTGATCACACCACAGCAGGCACTGCCCAGGGCTGGAGGGGGAATCTaGACTTTGGGGAGATCACTT | + |
Preference number: 4 (lower is better) Translates to: HRRQRGLDVITPQQALPRAGGGI*TLGRSL Trigger: AAGTGATCTCCCCAAAGTCCAGATTCCCCCTCCAGC...CCTGGGCAGTGCCTGCTGTGGTGTGATCACATCCAGTCCCCGCTGCCGTCTGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | AGAGGACAGAGTTACAAGCTAAGTGGGGAGTCACCTCACCTACTAGGGGCCACAGGAGGGTGGCGGGGGTaGTGGCCGATGTGGCAATGG | + |
Preference number: 4 (lower is better) Translates to: RGQSYKLSGESPHLLGATGGWRG*WPMWQW Trigger: CCATTGCCACATCGGCCACCACCCCCGCCACCCTCC...TGTGGCCCCTAGTAGGTGAGGTGACTCCCCACTTAGCTTGTAACTCTGTCCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | CCTCCCACACTGCAACTGTCTAGCATATACAAGGCGCCCTGCTGCCGCCCCCTCTGTAGGAGCTGGTGGTaGACATCCCCGTCATGTAGC | + |
Preference number: 4 (lower is better) Translates to: PPTLQLSSIYKAPCCRPLCRSWW*TSPSCS Trigger: GCTACATGACGGGGATGTCCACCACCAGCTCCTACA...GAGGGGGCGGCAGCAGGGCGCCTTGTATATGCTAGACAGTTGCAGTGTGGGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | CCCAGCCCTCCCACACTGCAACTGTCTAGCATATACAAGGCGCCCTGCTGCCGCCTGACATGTAGGAGCTaGTGGTGGACATCCCCGTCA | + |
Preference number: 4 (lower is better) Translates to: PSPPTLQLSSIYKAPCCRLTCRS*WWTSPS Trigger: TGACGGGGATGTCCACCACCAGCTCCTACATGTCAG...GCGGCAGCAGGGCGCCTTGTATATGCTAGACAGTTGCAGTGTGGGAGGGCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR TCA 90 bp | CAGCAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCACACCTGTTGTTTCCCTTGTaGGTAAAGGTCCAGGATTTG | + |
Preference number: 4 (lower is better) Translates to: QQALPRAHSSCQGPALPHLLFPL*VKVQDL Trigger: CAAATCCTGGACCTTTACTCACAAGGGAAACAACAG...GTGTGGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR GCA 90 bp | CCACAGCAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCACGCAAGATACATTACTaGGACAGCTATGATCTCTGG | + |
Preference number: 4 (lower is better) Translates to: PQQALPRAHSSCQGPALPRKIHY*DSYDLW Trigger: CCAGAGATCATAGCTGTCGCAGTAATGTATCTTGCG...TGGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTGCTGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | CCACAGCAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCAATCCCAGTACCAACATaGTTTTGTGTGGTCCAGGTT | + |
Preference number: 4 (lower is better) Translates to: PQQALPRAHSSCQGPALPIPVPT*FCVVQV Trigger: AACCTGGACCACACAAAACCATGTTGGTACTGGGAT...TGGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTGCTGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | CAGCAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCACACATCCCAGTACCAACATaGTTTTGTGTGGTCCAGGTT | + |
Preference number: 4 (lower is better) Translates to: QQALPRAHSSCQGPALPHIPVPT*FCVVQV Trigger: AACCTGGACCACACAAAACCATGTTGGTACTGGGAT...GTGTGGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | CAGCAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCACACACCATCTCCTATACATaGGTTTGGAGGTCCACTCTT | + |
Preference number: 4 (lower is better) Translates to: QQALPRAHSSCQGPALPHTISYT*VWRSTL Trigger: AAGAGTGGACCTCCAAACCCATGTATAGGAGATGGT...GTGTGGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | CAGCAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCACACTTTAGGTGGTGGTGGTaGTTCTGTAGCTTTGTTCTC | + |
Preference number: 4 (lower is better) Translates to: QQALPRAHSSCQGPALPHFRWWW*FCSFVL Trigger: GAGAACAAAGCTACAGAACCACCACCACCACCTAAA...GTGTGGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | ACCACAGCAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCGGGAATTTTAGGTGGTaGTGGTGGTTCTGTAGCTTT | + |
Preference number: 4 (lower is better) Translates to: TTAGTAQGTQFMPGPSPPGNFRW*WWFCSF Trigger: AAAGCTACAGAACCACCACCACCACCTAAAATTCCC...GGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTGCTGTGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | CAGCAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCACACGGGAATTTTAGGTGGTaGTGGTGGTTCTGTAGCTTT | + |
Preference number: 4 (lower is better) Translates to: QQALPRAHSSCQGPALPHGNFRW*WWFCSF Trigger: AAAGCTACAGAACCACCACCACCACCTAAAATTCCC...GTGTGGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | CCACAGAGAGAAGCCACAGAATGGAAGAACAACAGCCAGACTGCAGACAGGAGGTCCCCGTCATGTAGCTaGAGGGTGGCGGGGGTGGTG | + |
Preference number: 4 (lower is better) Translates to: PQREATEWKNNSQTADRRSPSCS*RVAGVV Trigger: CACCACCCCCGCCACCCTCCAGCTACATGACGGGGA...CCTCCTGTCTGCAGTCTGGCTGTTGTTCTTCCATTCTGTGGCTTCTCTCTGTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | CCCAGCCCTCCCACACTGCAACTGTCTAGCATATACAAGGCGCCCTGCTGCCGCCCTCCGTCTTCATCATaGACTGCAGGCTCTGATAGC | + |
Preference number: 4 (lower is better) Translates to: PSPPTLQLSSIYKAPCCRPPSSS*TAGSDS Trigger: GCTATCAGAGCCTGCAGTCCATGATGAAGACGGAGG...GCGGCAGCAGGGCGCCTTGTATATGCTAGACAGTTGCAGTGTGGGAGGGCTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | AGAGGACAGAGTTACAAGCTAAGTGGGGAGTCACCTCACCTACTAGGGGCCACAAGGGACTGCATGAGTTaGGGGCAGGCGTGGGGGTGG | + |
Preference number: 4 (lower is better) Translates to: RGQSYKLSGESPHLLGATRDCMS*GQAWGW Trigger: CCACCCCCACGCCTGCCCCCAACTCATGCAGTCCCT...TGTGGCCCCTAGTAGGTGAGGTGACTCCCCACTTAGCTTGTAACTCTGTCCTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR TCA 90 bp | CCCAGCCCTCCCACACTGCAACTGTCTAGCATATACAAGGCGCCCTGCTGCCGCTTACTGCGACAGCTATaGTCTCTGGTTCCCACTGCA | + |
Preference number: 4 (lower is better) Translates to: PSPPTLQLSSIYKAPCCRLLRQL*SLVPTA Trigger: TGCAGTGGGAACCAGAGATCATAGCTGTCGCAGTAA...GCGGCAGCAGGGCGCCTTGTATATGCTAGACAGTTGCAGTGTGGGAGGGCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR TCA 90 bp | CCCAGCCCTCCCACACTGCAACTGTCTAGCATATACAAGGCGCCCTGCTGCCGCTCAACAGGGACATCTTaGACGAACTGCTCCCACCAT | + |
Preference number: 4 (lower is better) Translates to: PSPPTLQLSSIYKAPCCRSTGTS*TNCSHH Trigger: ATGGTGGGAGCAGTTCGTTCAAGATGTCCCTGTTGA...GCGGCAGCAGGGCGCCTTGTATATGCTAGACAGTTGCAGTGTGGGAGGGCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | CACAGACGGCAGCGGGGACTGGATGTGATCACACCACAGCAGGCACTGCCCAGGACTGCAGTGACAGGGTaGTGCAGAGACTGTCATTTA | + |
Preference number: 4 (lower is better) Translates to: HRRQRGLDVITPQQALPRTAVTG*CRDCHL Trigger: TAAATGACAGTCTCTGCACCACCCTGTCACTGCAGT...CCTGGGCAGTGCCTGCTGTGGTGTGATCACATCCAGTCCCCGCTGCCGTCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | AGAGGACAGAGTTACAAGCTAAGTGGGGAGTCACCTCACCTACTAGGGGCCACAAGGTGGCATACCAGGTaGGGGGATGGGTGGGGGAAC | + |
Preference number: 4 (lower is better) Translates to: RGQSYKLSGESPHLLGATRWHTR*GDGWGN Trigger: GTTCCCCCACCCATCCCCCCACCTGGTATGCCACCT...TGTGGCCCCTAGTAGGTGAGGTGACTCCCCACTTAGCTTGTAACTCTGTCCTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR TCA 90 bp | CCTCCCACACTGCAACTGTCTAGCATATACAAGGCGCCCTGCTGCCGCCCCCTCGCTGCTTTGCATATTTaGGCAGGAACTGGTACGGAT | + |
Preference number: 4 (lower is better) Translates to: PPTLQLSSIYKAPCCRPLAALHI*AGTGTD Trigger: ATCCGTACCAGTTCCTGCTCAAATATGCAAAGCAGC...GAGGGGGCGGCAGCAGGGCGCCTTGTATATGCTAGACAGTTGCAGTGTGGGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR GCA 90 bp | CCACAGCAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCATCAAACTTTATGGTCTaGAGTAAGATCCTCTCCAAC | + |
Preference number: 4 (lower is better) Translates to: PQQALPRAHSSCQGPALPSNFMV*SKILSN Trigger: GTTGGAGAGGATCTTACTGCAGACCATAAAGTTTGA...TGGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTGCTGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR GCA 90 bp | ACCACAGCAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCTTATCACCTTTGAGCTaGTTTGCATATTTGAGCAGG | + |
Preference number: 4 (lower is better) Translates to: TTAGTAQGTQFMPGPSPPLSPLS*FAYLSR Trigger: CCTGCTCAAATATGCAAAGCAGCTCAAAGGTGATAA...GGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTGCTGTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | ACCACAGCAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCTCCTGTCACGTATCTTaGGAATTGTTTGAAGGAATG | + |
Preference number: 4 (lower is better) Translates to: TTAGTAQGTQFMPGPSPPSCHVS*ELFEGM Trigger: CATTCCTTCAAACAATTCCCAAGATACGTGACAGGA...GGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTGCTGTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | CAGCAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCACACTCCTATACATGGGTTTaGAGGTCCACTCTTGTATTT | + |
Preference number: 4 (lower is better) Translates to: QQALPRAHSSCQGPALPHSYTWV*RSTLVF Trigger: AAATACAAGAGTGGACCTCCAAACCCATGTATAGGA...GTGTGGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | AGAGGACAGAGTTACAAGCTAAGTGGGGAGTCACCTCACCTACTAGGGGCCACATGCTGCTGTTGCTGCTaGGCTGACTGCTGCGAGTCC | + |
Preference number: 4 (lower is better) Translates to: RGQSYKLSGESPHLLGATCCCCC*ADCCES Trigger: GGACTCGCAGCAGTCAGCCCAGCAGCAACAGCAGCA...TGTGGCCCCTAGTAGGTGAGGTGACTCCCCACTTAGCTTGTAACTCTGTCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | CAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCACACTGCAATTTTAGGTGGTGGTaGTGGTTCTGTAGCTTTGTT | + |
Preference number: 4 (lower is better) Translates to: QALPRAHSSCQGPALPHCNFRWW*WFCSFV Trigger: AACAAAGCTACAGAACCACCACCACCACCTAAAATT...GCAGTGTGGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | ACCACAGCAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCAATTTTAGGTGGTGGTaGTGGTTCTGTAGCTTTGTT | + |
Preference number: 4 (lower is better) Translates to: TTAGTAQGTQFMPGPSPPNFRWW*WFCSFV Trigger: AACAAAGCTACAGAACCACCACCACCACCTAAAATT...GGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTGCTGTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | AGAGGACAGAGTTACAAGCTAAGTGGGGAGTCACCTCACCTACTAGGGGCCACACTGGAGGTGGGTAGCTaGCTGGTGGCAAACCCAAGC | + |
Preference number: 4 (lower is better) Translates to: RGQSYKLSGESPHLLGATLEVGS*LVANPS Trigger: GCTTGGGTTTGCCACCAGCCAGCTACCCACCTCCAG...TGTGGCCCCTAGTAGGTGAGGTGACTCCCCACTTAGCTTGTAACTCTGTCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR GCA 90 bp | CACAGACGGCAGCGGGGACTGGATGTGATCACACCACAGCAGGCACTGCCCAGGAGGAACTGGTACGGATaGTCTACTTGTAAGTCAAAC | + |
Preference number: 4 (lower is better) Translates to: HRRQRGLDVITPQQALPRRNWYG*STCKSN Trigger: GTTTGACTTACAAGTAGAGCATCCGTACCAGTTCCT...CCTGGGCAGTGCCTGCTGTGGTGTGATCACATCCAGTCCCCGCTGCCGTCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR GCA 90 bp | CACAGACGGCAGCGGGGACTGGATGTGATCACACCACAGCAGGCACTGCCCAGGACCTTTGAGCTGCTTTaGATATTTGAGCAGGAACTG | + |
Preference number: 4 (lower is better) Translates to: HRRQRGLDVITPQQALPRTFELL*IFEQEL Trigger: CAGTTCCTGCTCAAATATGCAAAGCAGCTCAAAGGT...CCTGGGCAGTGCCTGCTGTGGTGTGATCACATCCAGTCCCCGCTGCCGTCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR GCA 90 bp | AGAGGACAGAGTTACAAGCTAAGTGGGGAGTCACCTCACCTACTAGGGGCCACATGCTGCTGGGCTGACTaGTGCGAGTCCTTCTGTGGA | + |
Preference number: 4 (lower is better) Translates to: RGQSYKLSGESPHLLGATCCWAD*CESFCG Trigger: TCCACAGAAGGACTCGCAGCAGTCAGCCCAGCAGCA...TGTGGCCCCTAGTAGGTGAGGTGACTCCCCACTTAGCTTGTAACTCTGTCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | CCACAGAGAGAAGCCACAGAATGGAAGAACAACAGCCAGACTGCAGACAGGAGGGGTACCGGGCCTCAGTaGCTGGATCGAGTCCTTCAA | + |
Preference number: 4 (lower is better) Translates to: PQREATEWKNNSQTADRRGTGPQ*LDRVLQ Trigger: TTGAAGGACTCGATCCAGCCACTGAGGCCCGGTACC...CCTCCTGTCTGCAGTCTGGCTGTTGTTCTTCCATTCTGTGGCTTCTCTCTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | ACCACAGCAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCCCAAACTGGCCGAACTaGACATCATTTAATAAACTA | + |
Preference number: 4 (lower is better) Translates to: TTAGTAQGTQFMPGPSPPPNWPN*TSFNKL Trigger: TAGTTTATTAAATGATGTCCAGTTCGGCCAGTTTGG...GGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTGCTGTGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | CCTCCCACACTGCAACTGTCTAGCATATACAAGGCGCCCTGCTGCCGCCCCCTCTTTAGGTGGTGGTGGTaGTTCTGTAGCTTTGTTCTC | + |
Preference number: 4 (lower is better) Translates to: PPTLQLSSIYKAPCCRPLFRWWW*FCSFVL Trigger: GAGAACAAAGCTACAGAACCACCACCACCACCTAAA...GAGGGGGCGGCAGCAGGGCGCCTTGTATATGCTAGACAGTTGCAGTGTGGGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | AGAGGACAGAGTTACAAGCTAAGTGGGGAGTCACCTCACCTACTAGGGGCCACATGGAGGTGGGTGTGCTaGAGGCAATGGTGGGTGAGT | + |
Preference number: 4 (lower is better) Translates to: RGQSYKLSGESPHLLGATWRWVC*RQWWVS Trigger: ACTCACCCACCATTGCCTCCAGCACACCCACCTCCA...TGTGGCCCCTAGTAGGTGAGGTGACTCCCCACTTAGCTTGTAACTCTGTCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | CCACAGAGAGAAGCCACAGAATGGAAGAACAACAGCCAGACTGCAGACAGGAGGCTTTGTTCTCTTCCTTaGGAGAAACCACCACGGCGC | + |
Preference number: 4 (lower is better) Translates to: PQREATEWKNNSQTADRRLCSLP*EKPPRR Trigger: GCGCCGTGGTGGTTTCTCCCAAGGAAGAGAACAAAG...CCTCCTGTCTGCAGTCTGGCTGTTGTTCTTCCATTCTGTGGCTTCTCTCTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR GCA 90 bp | CCTCCCACACTGCAACTGTCTAGCATATACAAGGCGCCCTGCTGCCGCCCCCTCCTTGTATTTCAAATTTaGACAAACGTCCCGCAAGAT | + |
Preference number: 4 (lower is better) Translates to: PPTLQLSSIYKAPCCRPLLVFQI*TNVPQD Trigger: ATCTTGCGGGACGTTTGTGCAAATTTGAAATACAAG...GAGGGGGCGGCAGCAGGGCGCCTTGTATATGCTAGACAGTTGCAGTGTGGGAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | CCACAGAGAGAAGCCACAGAATGGAAGAACAACAGCCAGACTGCAGACAGGAGGAGGTCCAGGATTTGGTaGCAGATGTCTTCCAGAACG | + |
Preference number: 4 (lower is better) Translates to: PQREATEWKNNSQTADRRRSRIW*QMSSRT Trigger: CGTTCTGGAAGACATCTGCCACCAAATCCTGGACCT...CCTCCTGTCTGCAGTCTGGCTGTTGTTCTTCCATTCTGTGGCTTCTCTCTGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | AGAATGGAAGAACAACAGCCAGACTGCAGACAGGAGGACATGGATACCAAAAGTTGCTGCTGTTGCTGCTaGGCTGACTGCTGCGAGTCC | + |
Preference number: 4 (lower is better) Translates to: RMEEQQPDCRQEDMDTKSCCCCC*ADCCES Trigger: GGACTCGCAGCAGTCAGCCCAGCAGCAACAGCAGCA...ACTTTTGGTATCCATGTCCTCCTGTCTGCAGTCTGGCTGTTGTTCTTCCATTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | TCCTTACTGAAGCTATTAACTGAGCCAATGTGGCTACTTAACATCTTCACTAGTCCACCACGGCGCGCTTaGCCTGTCGGGGAGGACTGG | + |
Preference number: 4 (lower is better) Translates to: SLLKLLTEPMWLLNIFTSPPRRA*PVGEDW Trigger: CCAGTCCTCCCCGACAGGCCAAGCGCGCCGTGGTGG...ACTAGTGAAGATGTTAAGTAGCCACATTGGCTCAGTTAATAGCTTCAGTAAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | CCACAGAGAGAAGCCACAGAATGGAAGAACAACAGCCAGACTGCAGACAGGAGGTGCTGGAGGCAATGGTaGGTGAGTAGCCTCAAGTTT | + |
Preference number: 4 (lower is better) Translates to: PQREATEWKNNSQTADRRCWRQW*VSSLKF Trigger: AAACTTGAGGCTACTCACCCACCATTGCCTCCAGCA...CCTCCTGTCTGCAGTCTGGCTGTTGTTCTTCCATTCTGTGGCTTCTCTCTGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | TCCTTACTGAAGCTATTAACTGAGCCAATGTGGCTACTTAACATCTTCACTAGTGGCAATGGTGGGGGCTaGTGCACAGGGGCCGGGTGG | + |
Preference number: 4 (lower is better) Translates to: SLLKLLTEPMWLLNIFTSGNGGG*CTGAGW Trigger: CCACCCGGCCCCTGTGCACCAGCCCCCACCATTGCC...ACTAGTGAAGATGTTAAGTAGCCACATTGGCTCAGTTAATAGCTTCAGTAAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | AGAATGGAAGAACAACAGCCAGACTGCAGACAGGAGGACATGGATACCAAAAGTGAGGTGGAGGTGGGTTaGGGGGATAGACATGGGGGT | + |
Preference number: 4 (lower is better) Translates to: RMEEQQPDCRQEDMDTKSEVEVG*GDRHGG Trigger: ACCCCCATGTCTATCCCCCCAACCCACCTCCACCTC...ACTTTTGGTATCCATGTCCTCCTGTCTGCAGTCTGGCTGTTGTTCTTCCATTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR TCA 90 bp | AGAATGGAAGAACAACAGCCAGACTGCAGACAGGAGGACATGGATACCAAAAGTACTTGTGGTGTAGGCTaGAGAGATGGGGGCTGCTGC | + |
Preference number: 4 (lower is better) Translates to: RMEEQQPDCRQEDMDTKSTCGVG*RDGGCC Trigger: GCAGCAGCCCCCATCTCTTCAGCCTACACCACAAGT...ACTTTTGGTATCCATGTCCTCCTGTCTGCAGTCTGGCTGTTGTTCTTCCATTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | CCACAGAGAGAAGCCACAGAATGGAAGAACAACAGCCAGACTGCAGACAGGAGGGGGTCATCTCCAAACTaGCCGAACTGGACATCATTT | + |
Preference number: 4 (lower is better) Translates to: PQREATEWKNNSQTADRRGSSPN*PNWTSF Trigger: AAATGATGTCCAGTTCGGCCAGTTTGGAGATGACCC...CCTCCTGTCTGCAGTCTGGCTGTTGTTCTTCCATTCTGTGGCTTCTCTCTGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | AGAATGGAAGAACAACAGCCAGACTGCAGACAGGAGGACATGGATACCAAAAGTCCCCTGGGGCACTTGTaGTGTAGGCTGAAGAGATGG | + |
Preference number: 4 (lower is better) Translates to: RMEEQQPDCRQEDMDTKSPLGHL*CRLKRW Trigger: CCATCTCTTCAGCCTACACCACAAGTGCCCCAGGGG...ACTTTTGGTATCCATGTCCTCCTGTCTGCAGTCTGGCTGTTGTTCTTCCATTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR TCA 90 bp | AGAGGACAGAGTTACAAGCTAAGTGGGGAGTCACCTCACCTACTAGGGGCCACACTGTTGTTTCCCTTGTaGGTAAAGGTCCAGGATTTG | + |
Preference number: 4 (lower is better) Translates to: RGQSYKLSGESPHLLGATLLFPL*VKVQDL Trigger: CAAATCCTGGACCTTTACTCACAAGGGAAACAACAG...TGTGGCCCCTAGTAGGTGAGGTGACTCCCCACTTAGCTTGTAACTCTGTCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR GCA 90 bp | AGAATGGAAGAACAACAGCCAGACTGCAGACAGGAGGACATGGATACCAAAAGTTTGGGCTGTTGTGCTTaGTGCTGTTGCTGCTGGGCT | + |
Preference number: 4 (lower is better) Translates to: RMEEQQPDCRQEDMDTKSLGCCA*CCCCWA Trigger: AGCCCAGCAGCAACAGCAGCAAGCACAACAGCCCAA...ACTTTTGGTATCCATGTCCTCCTGTCTGCAGTCTGGCTGTTGTTCTTCCATTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | CCACAGAGAGAAGCCACAGAATGGAAGAACAACAGCCAGACTGCAGACAGGAGGACCATCTCCTATACATaGGTTTGGAGGTCCACTCTT | + |
Preference number: 4 (lower is better) Translates to: PQREATEWKNNSQTADRRTISYT*VWRSTL Trigger: AAGAGTGGACCTCCAAACCCATGTATAGGAGATGGT...CCTCCTGTCTGCAGTCTGGCTGTTGTTCTTCCATTCTGTGGCTTCTCTCTGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | AGAATGGAAGAACAACAGCCAGACTGCAGACAGGAGGACATGGATACCAAAAGTACTGGGCTGAGGGGATaGTTTCTTGGGCTGTTGTGC | + |
Preference number: 4 (lower is better) Translates to: RMEEQQPDCRQEDMDTKSTGLRG*FLGLLC Trigger: GCACAACAGCCCAAGAAACCATCCCCTCAGCCCAGT...ACTTTTGGTATCCATGTCCTCCTGTCTGCAGTCTGGCTGTTGTTCTTCCATTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | AGAATGGAAGAACAACAGCCAGACTGCAGACAGGAGGACATGGATACCAAAAGTGCTGGAGGGGGAATCTaGACTTTGGGGAGATCACTT | + |
Preference number: 4 (lower is better) Translates to: RMEEQQPDCRQEDMDTKSAGGGI*TLGRSL Trigger: AAGTGATCTCCCCAAAGTCCAGATTCCCCCTCCAGC...ACTTTTGGTATCCATGTCCTCCTGTCTGCAGTCTGGCTGTTGTTCTTCCATTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | AGAATGGAAGAACAACAGCCAGACTGCAGACAGGAGGACATGGATACCAAAAGTCCTCCGTCTTCATCATaGACTGCAGGCTCTGATAGC | + |
Preference number: 4 (lower is better) Translates to: RMEEQQPDCRQEDMDTKSPPSSS*TAGSDS Trigger: GCTATCAGAGCCTGCAGTCCATGATGAAGACGGAGG...ACTTTTGGTATCCATGTCCTCCTGTCTGCAGTCTGGCTGTTGTTCTTCCATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR TCA 90 bp | AGAATGGAAGAACAACAGCCAGACTGCAGACAGGAGGACATGGATACCAAAAGTCCAGGTTTGCTGACGTaGCTGAAGGGCTTGAGTTTT | + |
Preference number: 4 (lower is better) Translates to: RMEEQQPDCRQEDMDTKSPGLLT*LKGLSF Trigger: AAAACTCAAGCCCTTCAGTCACGTCAGCAAACCTGG...ACTTTTGGTATCCATGTCCTCCTGTCTGCAGTCTGGCTGTTGTTCTTCCATTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR TCA 90 bp | TCCTTACTGAAGCTATTAACTGAGCCAATGTGGCTACTTAACATCTTCACTAGTTGCCCACATCAAAGATaGAGCGAGCCCCCTCTCGGC | + |
Preference number: 4 (lower is better) Translates to: SLLKLLTEPMWLLNIFTSCPHQR*SEPPLG Trigger: GCCGAGAGGGGGCTCGCTTCATCTTTGATGTGGGCA...ACTAGTGAAGATGTTAAGTAGCCACATTGGCTCAGTTAATAGCTTCAGTAAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR TCA 90 bp | AGAATGGAAGAACAACAGCCAGACTGCAGACAGGAGGACATGGATACCAAAAGTTCAACAGGGACATCTTaGACGAACTGCTCCCACCAT | + |
Preference number: 4 (lower is better) Translates to: RMEEQQPDCRQEDMDTKSSTGTS*TNCSHH Trigger: ATGGTGGGAGCAGTTCGTTCAAGATGTCCCTGTTGA...ACTTTTGGTATCCATGTCCTCCTGTCTGCAGTCTGGCTGTTGTTCTTCCATTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR GCA 90 bp | CCACAGAGAGAAGCCACAGAATGGAAGAACAACAGCCAGACTGCAGACAGGAGGTCAAACTTTATGGTCTaGAGTAAGATCCTCTCCAAC | + |
Preference number: 4 (lower is better) Translates to: PQREATEWKNNSQTADRRSNFMV*SKILSN Trigger: GTTGGAGAGGATCTTACTGCAGACCATAAAGTTTGA...CCTCCTGTCTGCAGTCTGGCTGTTGTTCTTCCATTCTGTGGCTTCTCTCTGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR GCA 90 bp | AGAGGACAGAGTTACAAGCTAAGTGGGGAGTCACCTCACCTACTAGGGGCCACATTATCACCTTTGAGCTaGTTTGCATATTTGAGCAGG | + |
Preference number: 4 (lower is better) Translates to: RGQSYKLSGESPHLLGATLSPLS*FAYLSR Trigger: CCTGCTCAAATATGCAAAGCAGCTCAAAGGTGATAA...TGTGGCCCCTAGTAGGTGAGGTGACTCCCCACTTAGCTTGTAACTCTGTCCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | AGAGGACAGAGTTACAAGCTAAGTGGGGAGTCACCTCACCTACTAGGGGCCACATCCTGTCACGTATCTTaGGAATTGTTTGAAGGAATG | + |
Preference number: 4 (lower is better) Translates to: RGQSYKLSGESPHLLGATSCHVS*ELFEGM Trigger: CATTCCTTCAAACAATTCCCAAGATACGTGACAGGA...TGTGGCCCCTAGTAGGTGAGGTGACTCCCCACTTAGCTTGTAACTCTGTCCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | TCCTTACTGAAGCTATTAACTGAGCCAATGTGGCTACTTAACATCTTCACTAGTGAGGTGGAGGTGGGTTaGGGGGATAGACATGGGGGT | + |
Preference number: 4 (lower is better) Translates to: SLLKLLTEPMWLLNIFTSEVEVG*GDRHGG Trigger: ACCCCCATGTCTATCCCCCCAACCCACCTCCACCTC...ACTAGTGAAGATGTTAAGTAGCCACATTGGCTCAGTTAATAGCTTCAGTAAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | AGAATGGAAGAACAACAGCCAGACTGCAGACAGGAGGACATGGATACCAAAAGTACTGCAGTGACAGGGTaGTGCAGAGACTGTCATTTA | + |
Preference number: 4 (lower is better) Translates to: RMEEQQPDCRQEDMDTKSTAVTG*CRDCHL Trigger: TAAATGACAGTCTCTGCACCACCCTGTCACTGCAGT...ACTTTTGGTATCCATGTCCTCCTGTCTGCAGTCTGGCTGTTGTTCTTCCATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | TCCTTACTGAAGCTATTAACTGAGCCAATGTGGCTACTTAACATCTTCACTAGTCTGACATGTAGGAGCTaGTGGTGGACATCCCCGTCA | + |
Preference number: 4 (lower is better) Translates to: SLLKLLTEPMWLLNIFTSLTCRS*WWTSPS Trigger: TGACGGGGATGTCCACCACCAGCTCCTACATGTCAG...ACTAGTGAAGATGTTAAGTAGCCACATTGGCTCAGTTAATAGCTTCAGTAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR GCA 90 bp | AGAATGGAAGAACAACAGCCAGACTGCAGACAGGAGGACATGGATACCAAAAGTACCTTTGAGCTGCTTTaGATATTTGAGCAGGAACTG | + |
Preference number: 4 (lower is better) Translates to: RMEEQQPDCRQEDMDTKSTFELL*IFEQEL Trigger: CAGTTCCTGCTCAAATATGCAAAGCAGCTCAAAGGT...ACTTTTGGTATCCATGTCCTCCTGTCTGCAGTCTGGCTGTTGTTCTTCCATTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR TCA 90 bp | TCCTTACTGAAGCTATTAACTGAGCCAATGTGGCTACTTAACATCTTCACTAGTCCAGGTTTGCTGACGTaGCTGAAGGGCTTGAGTTTT | + |
Preference number: 4 (lower is better) Translates to: SLLKLLTEPMWLLNIFTSPGLLT*LKGLSF Trigger: AAAACTCAAGCCCTTCAGTCACGTCAGCAAACCTGG...ACTAGTGAAGATGTTAAGTAGCCACATTGGCTCAGTTAATAGCTTCAGTAAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR GCA 90 bp | TCCTTACTGAAGCTATTAACTGAGCCAATGTGGCTACTTAACATCTTCACTAGTAGTTGTGAGGGTGTGTaGGCTAGGTCCTTCTTATCC | + |
Preference number: 4 (lower is better) Translates to: SLLKLLTEPMWLLNIFTSSCEGV*ARSFLS Trigger: GGATAAGAAGGACCTAGCGCACACACCCTCACAACT...ACTAGTGAAGATGTTAAGTAGCCACATTGGCTCAGTTAATAGCTTCAGTAAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | AGAATGGAAGAACAACAGCCAGACTGCAGACAGGAGGACATGGATACCAAAAGTTCCTATACATGGGTTTaGAGGTCCACTCTTGTATTT | + |
Preference number: 4 (lower is better) Translates to: RMEEQQPDCRQEDMDTKSSYTWV*RSTLVF Trigger: AAATACAAGAGTGGACCTCCAAACCCATGTATAGGA...ACTTTTGGTATCCATGTCCTCCTGTCTGCAGTCTGGCTGTTGTTCTTCCATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR TCA 90 bp | TCCTTACTGAAGCTATTAACTGAGCCAATGTGGCTACTTAACATCTTCACTAGTTCCTCTCCAACACCATaGCTTCTTCCTTTGGGTCAT | + |
Preference number: 4 (lower is better) Translates to: SLLKLLTEPMWLLNIFTSSSPTP*LLPLGH Trigger: ATGACCCAAAGGAAGAAGTCATGGTGTTGGAGAGGA...ACTAGTGAAGATGTTAAGTAGCCACATTGGCTCAGTTAATAGCTTCAGTAAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | TCCTTACTGAAGCTATTAACTGAGCCAATGTGGCTACTTAACATCTTCACTAGTCAACATGGTTTTGTGTaGTCCAGGTTTGCTGACGTG | + |
Preference number: 4 (lower is better) Translates to: SLLKLLTEPMWLLNIFTSQHGFV*SRFADV Trigger: CACGTCAGCAAACCTGGACCACACAAAACCATGTTG...ACTAGTGAAGATGTTAAGTAGCCACATTGGCTCAGTTAATAGCTTCAGTAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | AGAATGGAAGAACAACAGCCAGACTGCAGACAGGAGGACATGGATACCAAAAGTCCAAACTGGCCGAACTaGACATCATTTAATAAACTA | + |
Preference number: 4 (lower is better) Translates to: RMEEQQPDCRQEDMDTKSPNWPN*TSFNKL Trigger: TAGTTTATTAAATGATGTCCAGTTCGGCCAGTTTGG...ACTTTTGGTATCCATGTCCTCCTGTCTGCAGTCTGGCTGTTGTTCTTCCATTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CCA 90 bp | TCCTTACTGAAGCTATTAACTGAGCCAATGTGGCTACTTAACATCTTCACTAGTGGGTCATCTCCAAACTaGCCGAACTGGACATCATTT | + |
Preference number: 4 (lower is better) Translates to: SLLKLLTEPMWLLNIFTSGSSPN*PNWTSF Trigger: AAATGATGTCCAGTTCGGCCAGTTTGGAGATGACCC...ACTAGTGAAGATGTTAAGTAGCCACATTGGCTCAGTTAATAGCTTCAGTAAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR GCA 90 bp | TCCTTACTGAAGCTATTAACTGAGCCAATGTGGCTACTTAACATCTTCACTAGTCTTGTATTTCAAATTTaGACAAACGTCCCGCAAGAT | + |
Preference number: 4 (lower is better) Translates to: SLLKLLTEPMWLLNIFTSLVFQI*TNVPQD Trigger: ATCTTGCGGGACGTTTGTGCAAATTTGAAATACAAG...ACTAGTGAAGATGTTAAGTAGCCACATTGGCTCAGTTAATAGCTTCAGTAAGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CAA 90 bp | CAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCACACTGCACCACCACGGCGCGCTaGGCCTGTCGGGGAGGACTG | + |
Preference number: 5 (lower is better) Translates to: QALPRAHSSCQGPALPHCTTTAR*ACRGGL Trigger: CAGTCCTCCCCGACAGGCCAAGCGCGCCGTGGTGGT...GCAGTGTGGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CAA 90 bp | CAGCAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCACACTGGCCCCTGGGGCACTaGTGGTGTAGGCTGAAGAGA | + |
Preference number: 5 (lower is better) Translates to: QQALPRAHSSCQGPALPHWPLGH*WCRLKR Trigger: TCTCTTCAGCCTACACCACAAGTGCCCCAGGGGCCA...GTGTGGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTGCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CAA 90 bp | ACCACAGCAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCTGGCCCCTGGGGCACTaGTGGTGTAGGCTGAAGAGA | + |
Preference number: 5 (lower is better) Translates to: TTAGTAQGTQFMPGPSPPWPLGH*WCRLKR Trigger: TCTCTTCAGCCTACACCACAAGTGCCCCAGGGGCCA...GGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTGCTGTGGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS CCA 90 bp | ACTGCAGGCTCTGATAGCCCTCTCCTGACATGTAGGAGCTGGTGGTaGACATCCCCGTCATGTAGCTGGAGGGTGGCGGGGGTGGTGGCC | + |
Preference number: 5 (lower is better) Translates to: TAGSDSPLLTCRSWW*TSPSCSWRVAGVVA Trigger: GGCCACCACCCCCGCCACCCTCCAGCTACATGACGGGGATGTCCACCACCAGCTCCTACATGTCAGGAGAGGGCTATCAGAGCCTGCAGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CAA 90 bp | CAGCAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCACACGCTTTGTTCTCTTCCTaGGGAGAAACCACCACGGCG | + |
Preference number: 5 (lower is better) Translates to: QQALPRAHSSCQGPALPHALFSS*GETTTA Trigger: CGCCGTGGTGGTTTCTCCCAAGGAAGAGAACAAAGC...GTGTGGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTGCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS TCA 90 bp | GACTGCTGCGAGTCCTTCTGTGGAGGCTGGGCTGCTTCTGAGCCTTaGGATGGTTGGGACTGTGGCCCCTGGGGCACTTGTGGTGTAGGC | + |
Preference number: 5 (lower is better) Translates to: DCCESFCGGWAASEP*DGWDCGPWGTCGVG Trigger: GCCTACACCACAAGTGCCCCAGGGGCCACAGTCCCAACCATCTCAAGGCTCAGAAGCAGCCCAGCCTCCACAGAAGGACTCGCAGCAGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS CCA 90 bp | TGGACTGCAGGCTCTGATAGCCCTCTCCTGACATGTAGGAGCTGGTaGTGGACATCCCCGTCATGTAGCTGGAGGGTGGCGGGGGTGGTG | + |
Preference number: 5 (lower is better) Translates to: WTAGSDSPLLTCRSW*WTSPSCSWRVAGVV Trigger: CACCACCCCCGCCACCCTCCAGCTACATGACGGGGATGTCCACCACCAGCTCCTACATGTCAGGAGAGGGCTATCAGAGCCTGCAGTCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS CCA 90 bp | AGGCTGGGGGCAGGGCACCATAGGAGGGGCCCTCCGTCTTCATCATaGACTGCAGGCTCTGATAGCCCTCTCCTGACATGTAGGAGCTGG | + |
Preference number: 5 (lower is better) Translates to: RLGAGHHRRGPPSSS*TAGSDSPLLTCRSW Trigger: CCAGCTCCTACATGTCAGGAGAGGGCTATCAGAGCCTGCAGTCCATGATGAAGACGGAGGGCCCCTCCTATGGTGCCCTGCCCCCAGCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CAA 90 bp | CAGCAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCACACGTCAACAGGGACATCTaGAACGAACTGCTCCCACCA | + |
Preference number: 5 (lower is better) Translates to: QQALPRAHSSCQGPALPHVNRDI*NELLPP Trigger: TGGTGGGAGCAGTTCGTTCAAGATGTCCCTGTTGAC...GTGTGGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS CCA 90 bp | TCATGGACTGCAGGCTCTGATAGCCCTCTCCTGACATGTAGGAGCTaGTGGTGGACATCCCCGTCATGTAGCTGGAGGGTGGCGGGGGTG | + |
Preference number: 5 (lower is better) Translates to: SWTAGSDSPLLTCRS*WWTSPSCSWRVAGV Trigger: CACCCCCGCCACCCTCCAGCTACATGACGGGGATGTCCACCACCAGCTCCTACATGTCAGGAGAGGGCTATCAGAGCCTGCAGTCCATGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CAA 90 bp | CAGCAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCACACGTAAAGGTCCAGGATTaGGTGGCAGATGTCTTCCAG | + |
Preference number: 5 (lower is better) Translates to: QQALPRAHSSCQGPALPHVKVQD*VADVFQ Trigger: CTGGAAGACATCTGCCACCAAATCCTGGACCTTTAC...GTGTGGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS TCA 90 bp | CCAGGGTGTCATAGTGTAACCCCAAACGTGTGCCCACATCAAAGATaGAGCGAGCCCCCTCTCGGCGGTACCGGGCCTCAGTGGCTGGAT | + |
Preference number: 5 (lower is better) Translates to: PGCHSVTPNVCPHQR*SEPPLGGTGPQWLD Trigger: ATCCAGCCACTGAGGCCCGGTACCGCCGAGAGGGGGCTCGCTTCATCTTTGATGTGGGCACACGTTTGGGGTTACACTATGACACCCTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CAA 90 bp | CCACAGCAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCAAGTACCAACATGGTTTaGTGTGGTCCAGGTTTGCTG | + |
Preference number: 5 (lower is better) Translates to: PQQALPRAHSSCQGPALPSTNMV*CGPGLL Trigger: CAGCAAACCTGGACCACACAAAACCATGTTGGTACT...TGGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTGCTGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CAA 90 bp | CAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCACACTGCAGCTGCTTTGCATATTaGAGCAGGAACTGGTACGGA | + |
Preference number: 5 (lower is better) Translates to: QALPRAHSSCQGPALPHCSCFAY*SRNWYG Trigger: TCCGTACCAGTTCCTGCTCAAATATGCAAAGCAGCT...GCAGTGTGGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CAA 90 bp | CCACAGCAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCAGGTGGTTCTGTAGCTTaGTTCTCTTCCTTGGGAGAA | + |
Preference number: 5 (lower is better) Translates to: PQQALPRAHSSCQGPALPGGSVA*FSSLGE Trigger: TTCTCCCAAGGAAGAGAACAAAGCTACAGAACCACC...TGGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTGCTGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CAA 90 bp | CACAGACGGCAGCGGGGACTGGATGTGATCACACCACAGCAGGCACTGCCCAGGGGGGGAATCTGGACTTaGGGGAGATCACTTGTTTCC | + |
Preference number: 5 (lower is better) Translates to: HRRQRGLDVITPQQALPRGGIWT*GRSLVS Trigger: GGAAACAAGTGATCTCCCCAAAGTCCAGATTCCCCC...CCTGGGCAGTGCCTGCTGTGGTGTGATCACATCCAGTCCCCGCTGCCGTCTGTG 60% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS CCA 90 bp | GAGGGGAGGCTTCCGGTCTGGAGGTGGGTGTGCTGGAGGCAATGGTaGGTGAGTAGCCTCAAGTTTGGGAATTTTAGGTGGTGGTGGTGG | + |
Preference number: 5 (lower is better) Translates to: EGRLPVWRWVCWRQW*VSSLKFGNFRWWWW Trigger: CCACCACCACCACCTAAAATTCCCAAACTTGAGGCTACTCACCCACCATTGCCTCCAGCACACCCACCTCCAGACCGGAAGCCTCCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CAA 90 bp | CAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCACACTGCCTCCTATACATGGGTTaGGAGGTCCACTCTTGTATT | + |
Preference number: 5 (lower is better) Translates to: QALPRAHSSCQGPALPHCLLYMG*EVHSCI Trigger: AATACAAGAGTGGACCTCCAAACCCATGTATAGGAG...GCAGTGTGGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CAA 90 bp | CCCAGCCCTCCCACACTGCAACTGTCTAGCATATACAAGGCGCCCTGCTGCCGCTTTCCACAGGACCAGTaGCTTCAGCCTCACCTAAGG | + |
Preference number: 5 (lower is better) Translates to: PSPPTLQLSSIYKAPCCRFPQDQ*LQPHLR Trigger: CCTTAGGTGAGGCTGAAGCAACTGGTCCTGTGGAAA...GCGGCAGCAGGGCGCCTTGTATATGCTAGACAGTTGCAGTGTGGGAGGGCTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CAA 90 bp | CCTCCCACACTGCAACTGTCTAGCATATACAAGGCGCCCTGCTGCCGCCCCCTCGGGGGAATCTGGACTTaGGGGAGATCACTTGTTTCC | + |
Preference number: 5 (lower is better) Translates to: PPTLQLSSIYKAPCCRPLGGIWT*GRSLVS Trigger: GGAAACAAGTGATCTCCCCAAAGTCCAGATTCCCCC...GAGGGGGCGGCAGCAGGGCGCCTTGTATATGCTAGACAGTTGCAGTGTGGGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS TCA 90 bp | GCCCTCCGTCTTCATCATGGACTGCAGGCTCTGATAGCCCTCTCCTaGCATGTAGGAGCTGGTGGTGGACATCCCCGTCATGTAGCTGGA | + |
Preference number: 5 (lower is better) Translates to: ALRLHHGLQALIALS*HVGAGGGHPRHVAG Trigger: TCCAGCTACATGACGGGGATGTCCACCACCAGCTCCTACATGTCAGGAGAGGGCTATCAGAGCCTGCAGTCCATGATGAAGACGGAGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CAA 90 bp | CACAGACGGCAGCGGGGACTGGATGTGATCACACCACAGCAGGCACTGCCCAGGAGTACCAACATGGTTTaGTGTGGTCCAGGTTTGCTG | + |
Preference number: 5 (lower is better) Translates to: HRRQRGLDVITPQQALPRSTNMV*CGPGLL Trigger: CAGCAAACCTGGACCACACAAAACCATGTTGGTACT...CCTGGGCAGTGCCTGCTGTGGTGTGATCACATCCAGTCCCCGCTGCCGTCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CAA 90 bp | CAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCACACTGCCACGTATCTTGGGAATaGTTTGAAGGAATGGAACAT | + |
Preference number: 5 (lower is better) Translates to: QALPRAHSSCQGPALPHCHVSWE*FEGMEH Trigger: ATGTTCCATTCCTTCAAACAATTCCCAAGATACGTG...GCAGTGTGGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CAA 90 bp | CAGGCACTGCCCAGGGCACACAGTTCATGCCAGGGCCCAGCCCTCCCACACTGCTCTTGTATTTCAAATTaGCACAAACGTCCCGCAAGA | + |
Preference number: 5 (lower is better) Translates to: QALPRAHSSCQGPALPHCSCISN*HKRPAR Trigger: TCTTGCGGGACGTTTGTGCAAATTTGAAATACAAGA...GCAGTGTGGGAGGGCTGGGCCCTGGCATGAACTGTGTGCCCTGGGCAGTGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CAA 90 bp | AGAATGGAAGAACAACAGCCAGACTGCAGACAGGAGGACATGGATACCAAAAGTGAGGGACTGCATGAGTaGGGGGCAGGCGTGGGGGTG | + |
Preference number: 5 (lower is better) Translates to: RMEEQQPDCRQEDMDTKSEGLHE*GAGVGV Trigger: CACCCCCACGCCTGCCCCCAACTCATGCAGTCCCTC...ACTTTTGGTATCCATGTCCTCCTGTCTGCAGTCTGGCTGTTGTTCTTCCATTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CAA 90 bp | AGAGGACAGAGTTACAAGCTAAGTGGGGAGTCACCTCACCTACTAGGGGCCACAGCTTTGTTCTCTTCCTaGGGAGAAACCACCACGGCG | + |
Preference number: 5 (lower is better) Translates to: RGQSYKLSGESPHLLGATALFSS*GETTTA Trigger: CGCCGTGGTGGTTTCTCCCAAGGAAGAGAACAAAGC...TGTGGCCCCTAGTAGGTGAGGTGACTCCCCACTTAGCTTGTAACTCTGTCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CAA 90 bp | CCTCCCACACTGCAACTGTCTAGCATATACAAGGCGCCCTGCTGCCGCCCCCTCCACGTATCTTGGGAATaGTTTGAAGGAATGGAACAT | + |
Preference number: 5 (lower is better) Translates to: PPTLQLSSIYKAPCCRPLHVSWE*FEGMEH Trigger: ATGTTCCATTCCTTCAAACAATTCCCAAGATACGTG...GAGGGGGCGGCAGCAGGGCGCCTTGTATATGCTAGACAGTTGCAGTGTGGGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CAA 90 bp | AGAGGACAGAGTTACAAGCTAAGTGGGGAGTCACCTCACCTACTAGGGGCCACAGTCAACAGGGACATCTaGAACGAACTGCTCCCACCA | + |
Preference number: 5 (lower is better) Translates to: RGQSYKLSGESPHLLGATVNRDI*NELLPP Trigger: TGGTGGGAGCAGTTCGTTCAAGATGTCCCTGTTGAC...TGTGGCCCCTAGTAGGTGAGGTGACTCCCCACTTAGCTTGTAACTCTGTCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CAA 90 bp | CCACAGAGAGAAGCCACAGAATGGAAGAACAACAGCCAGACTGCAGACAGGAGGTGGTTTCTTGGGCTGTaGTGCTTGCTGCTGTTGCTG | + |
Preference number: 5 (lower is better) Translates to: PQREATEWKNNSQTADRRWFLGL*CLLLLL Trigger: CAGCAACAGCAGCAAGCACAACAGCCCAAGAAACCA...CCTCCTGTCTGCAGTCTGGCTGTTGTTCTTCCATTCTGTGGCTTCTCTCTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CAA 90 bp | CCTCCCACACTGCAACTGTCTAGCATATACAAGGCGCCCTGCTGCCGCCCCCTCTTTGGAGGTCCACTCTaGTATTTCAAATTTGCACAA | + |
Preference number: 5 (lower is better) Translates to: PPTLQLSSIYKAPCCRPLFGGPL*YFKFAQ Trigger: TTGTGCAAATTTGAAATACAAGAGTGGACCTCCAAA...GAGGGGGCGGCAGCAGGGCGCCTTGTATATGCTAGACAGTTGCAGTGTGGGAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CAA 90 bp | TCCTTACTGAAGCTATTAACTGAGCCAATGTGGCTACTTAACATCTTCACTAGTACCACCACGGCGCGCTaGGCCTGTCGGGGAGGACTG | + |
Preference number: 5 (lower is better) Translates to: SLLKLLTEPMWLLNIFTSTTTAR*ACRGGL Trigger: CAGTCCTCCCCGACAGGCCAAGCGCGCCGTGGTGGT...ACTAGTGAAGATGTTAAGTAGCCACATTGGCTCAGTTAATAGCTTCAGTAAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CAA 90 bp | AGAGGACAGAGTTACAAGCTAAGTGGGGAGTCACCTCACCTACTAGGGGCCACACTTTGGGGAGATCACTaGTTTCCACAGGACCAGTTG | + |
Preference number: 5 (lower is better) Translates to: RGQSYKLSGESPHLLGATLWGDH*FPQDQL Trigger: CAACTGGTCCTGTGGAAACAAGTGATCTCCCCAAAG...TGTGGCCCCTAGTAGGTGAGGTGACTCCCCACTTAGCTTGTAACTCTGTCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS TCA 90 bp | CTGCAGCTGATGAGGGGTGTGATGAGGCATCTGTTGTTTCCCTTGTaGGTAAAGGTCCAGGATTTGGTGGCAGATGTCTTCCAGAACGTC | + |
Preference number: 5 (lower is better) Translates to: LQLMRGVMRHLLFPL*VKVQDLVADVFQNV Trigger: GACGTTCTGGAAGACATCTGCCACCAAATCCTGGACCTTTACTCACAAGGGAAACAACAGATGCCTCATCACACCCCTCATCAGCTGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CAA 90 bp | TCCTTACTGAAGCTATTAACTGAGCCAATGTGGCTACTTAACATCTTCACTAGTGAGGGACTGCATGAGTaGGGGGCAGGCGTGGGGGTG | + |
Preference number: 5 (lower is better) Translates to: SLLKLLTEPMWLLNIFTSEGLHE*GAGVGV Trigger: CACCCCCACGCCTGCCCCCAACTCATGCAGTCCCTC...ACTAGTGAAGATGTTAAGTAGCCACATTGGCTCAGTTAATAGCTTCAGTAAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS TCA 90 bp | CAAATTTGCACAAACGTCCCGCAAGATACATTACTGCGACAGCTATaGTCTCTGGTTCCCACTGCAGTGACAGGGTGGTGCAGAGACTGT | + |
Preference number: 5 (lower is better) Translates to: QICTNVPQDTLLRQL*SLVPTAVTGWCRDC Trigger: ACAGTCTCTGCACCACCCTGTCACTGCAGTGGGAACCAGAGATCATAGCTGTCGCAGTAATGTATCTTGCGGGACGTTTGTGCAAATTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CAA 90 bp | AGAGGACAGAGTTACAAGCTAAGTGGGGAGTCACCTCACCTACTAGGGGCCACACTCCTATACATGGGTTaGGAGGTCCACTCTTGTATT | + |
Preference number: 5 (lower is better) Translates to: RGQSYKLSGESPHLLGATLLYMG*EVHSCI Trigger: AATACAAGAGTGGACCTCCAAACCCATGTATAGGAG...TGTGGCCCCTAGTAGGTGAGGTGACTCCCCACTTAGCTTGTAACTCTGTCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS GCA 90 bp | CCCGCAAGATACATTACTGCGACAGCTATGATCTCTGGTTCCCACTaGAGTGACAGGGTGGTGCAGAGACTGTCATTTACAAATGTCCAT | + |
Preference number: 5 (lower is better) Translates to: PARYITATAMISGSH*SDRVVQRLSFTNVH Trigger: ATGGACATTTGTAAATGACAGTCTCTGCACCACCCTGTCACTGCAGTGGGAACCAGAGATCATAGCTGTCGCAGTAATGTATCTTGCGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CAA 90 bp | AGAATGGAAGAACAACAGCCAGACTGCAGACAGGAGGACATGGATACCAAAAGTTGGTTTCTTGGGCTGTaGTGCTTGCTGCTGTTGCTG | + |
Preference number: 5 (lower is better) Translates to: RMEEQQPDCRQEDMDTKSWFLGL*CLLLLL Trigger: CAGCAACAGCAGCAAGCACAACAGCCCAAGAAACCA...ACTTTTGGTATCCATGTCCTCCTGTCTGCAGTCTGGCTGTTGTTCTTCCATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CAA 90 bp | AGAATGGAAGAACAACAGCCAGACTGCAGACAGGAGGACATGGATACCAAAAGTTTTCCACAGGACCAGTaGCTTCAGCCTCACCTAAGG | + |
Preference number: 5 (lower is better) Translates to: RMEEQQPDCRQEDMDTKSFPQDQ*LQPHLR Trigger: CCTTAGGTGAGGCTGAAGCAACTGGTCCTGTGGAAA...ACTTTTGGTATCCATGTCCTCCTGTCTGCAGTCTGGCTGTTGTTCTTCCATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CAA 90 bp | CCACAGAGAGAAGCCACAGAATGGAAGAACAACAGCCAGACTGCAGACAGGAGGTCTTGTATTTCAAATTaGCACAAACGTCCCGCAAGA | + |
Preference number: 5 (lower is better) Translates to: PQREATEWKNNSQTADRRSCISN*HKRPAR Trigger: TCTTGCGGGACGTTTGTGCAAATTTGAAATACAAGA...CCTCCTGTCTGCAGTCTGGCTGTTGTTCTTCCATTCTGTGGCTTCTCTCTGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CAA 90 bp | AGAGGACAGAGTTACAAGCTAAGTGGGGAGTCACCTCACCTACTAGGGGCCACATTTGGAGGTCCACTCTaGTATTTCAAATTTGCACAA | + |
Preference number: 5 (lower is better) Translates to: RGQSYKLSGESPHLLGATFGGPL*YFKFAQ Trigger: TTGTGCAAATTTGAAATACAAGAGTGGACCTCCAAA...TGTGGCCCCTAGTAGGTGAGGTGACTCCCCACTTAGCTTGTAACTCTGTCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS GCA 90 bp | AGGAACTGGTACGGATGCTCTACTTGTAAGTCAAACTTTATGGTCTaGAGTAAGATCCTCTCCAACACCATGACTTCTTCCTTTGGGTCA | + |
Preference number: 5 (lower is better) Translates to: RNWYGCSTCKSNFMV*SKILSNTMTSSFGS Trigger: TGACCCAAAGGAAGAAGTCATGGTGTTGGAGAGGATCTTACTGCAGACCATAAAGTTTGACTTACAAGTAGAGCATCCGTACCAGTTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS CCA 90 bp | ATCCTCTCCAACACCATGACTTCTTCCTTTGGGTCATCTCCAAACTaGCCGAACTGGACATCATTTAATAAACTACGAGCCGTTTTGATG | + |
Preference number: 5 (lower is better) Translates to: ILSNTMTSSFGSSPN*PNWTSFNKLRAVLM Trigger: CATCAAAACGGCTCGTAGTTTATTAAATGATGTCCAGTTCGGCCAGTTTGGAGATGACCCAAAGGAAGAAGTCATGGTGTTGGAGAGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS GCA 90 bp | TCACCTTTGAGCTGCTTTGCATATTTGAGCAGGAACTGGTACGGATaGTCTACTTGTAAGTCAAACTTTATGGTCTGCAGTAAGATCCTC | + |
Preference number: 5 (lower is better) Translates to: SPLSCFAYLSRNWYG*STCKSNFMVCSKIL Trigger: GAGGATCTTACTGCAGACCATAAAGTTTGACTTACAAGTAGAGCATCCGTACCAGTTCCTGCTCAAATATGCAAAGCAGCTCAAAGGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CAA 90 bp | TCCTTACTGAAGCTATTAACTGAGCCAATGTGGCTACTTAACATCTTCACTAGTCTTTGGGGAGATCACTaGTTTCCACAGGACCAGTTG | + |
Preference number: 5 (lower is better) Translates to: SLLKLLTEPMWLLNIFTSLWGDH*FPQDQL Trigger: CAACTGGTCCTGTGGAAACAAGTGATCTCCCCAAAG...ACTAGTGAAGATGTTAAGTAGCCACATTGGCTCAGTTAATAGCTTCAGTAAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS-3UTR CAA 90 bp | TCCTTACTGAAGCTATTAACTGAGCCAATGTGGCTACTTAACATCTTCACTAGTGGTGGTTCTGTAGCTTaGTTCTCTTCCTTGGGAGAA | + |
Preference number: 5 (lower is better) Translates to: SLLKLLTEPMWLLNIFTSGGSVA*FSSLGE Trigger: TTCTCCCAAGGAAGAGAACAAAGCTACAGAACCACC...ACTAGTGAAGATGTTAAGTAGCCACATTGGCTCAGTTAATAGCTTCAGTAAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS CCA 90 bp | AACACCATGACTTCTTCCTTTGGGTCATCTCCAAACTGGCCGAACTaGACATCATTTAATAAACTACGAGCCGTTTTGATGATATCTTTA | + |
Preference number: 5 (lower is better) Translates to: NTMTSSFGSSPNWPN*TSFNKLRAVLMISL Trigger: TAAAGATATCATCAAAACGGCTCGTAGTTTATTAAATGATGTCCAGTTCGGCCAGTTTGGAGATGACCCAAAGGAAGAAGTCATGGTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS CCA 90 bp | TTGTTTTTATCACCTTTGAGCTGCTTTGCATATTTGAGCAGGAACTaGTACGGATGCTCTACTTGTAAGTCAAACTTTATGGTCTGCAGT | + |
Preference number: 5 (lower is better) Translates to: LFLSPLSCFAYLSRN*YGCSTCKSNFMVCS Trigger: ACTGCAGACCATAAAGTTTGACTTACAAGTAGAGCATCCGTACCAGTTCCTGCTCAAATATGCAAAGCAGCTCAAAGGTGATAAAAACAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS CCA 72 bp | TGTAGGAGCTGGTGGTGGACATCCCCGTCATGTAGCTaGAGGGTGGCGGGGGTGGTGGCCGATGTGGCAATG | + |
Preference number: 6 (lower is better) Translates to: CRSWWWTSPSCS*RVAGVVADVAM Trigger: CATTGCCACATCGGCCACCACCCCCGCCACCCTCCAGCTACATGACGGGGATGTCCACCACCAGCTCCTACA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS TCA 72 bp | GAGTCCTTCTGTGGAGGCTGGGCTGCTTCTGAGCCTTaGGATGGTTGGGACTGTGGCCCCTGGGGCACTTGT | + |
Preference number: 6 (lower is better) Translates to: ESFCGGWAASEP*DGWDCGPWGTC Trigger: ACAAGTGCCCCAGGGGCCACAGTCCCAACCATCTCAAGGCTCAGAAGCAGCCCAGCCTCCACAGAAGGACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS CCA 72 bp | TCTGATAGCCCTCTCCTGACATGTAGGAGCTGGTGGTaGACATCCCCGTCATGTAGCTGGAGGGTGGCGGGG | + |
Preference number: 6 (lower is better) Translates to: SDSPLLTCRSWW*TSPSCSWRVAG Trigger: CCCCGCCACCCTCCAGCTACATGACGGGGATGTCCACCACCAGCTCCTACATGTCAGGAGAGGGCTATCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS CCA 72 bp | GGCTCTGATAGCCCTCTCCTGACATGTAGGAGCTGGTaGTGGACATCCCCGTCATGTAGCTGGAGGGTGGCG | + |
Preference number: 6 (lower is better) Translates to: GSDSPLLTCRSW*WTSPSCSWRVA Trigger: CGCCACCCTCCAGCTACATGACGGGGATGTCCACCACCAGCTCCTACATGTCAGGAGAGGGCTATCAGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS TCA 72 bp | CATAGTGTAACCCCAAACGTGTGCCCACATCAAAGATaGAGCGAGCCCCCTCTCGGCGGTACCGGGCCTCAG | + |
Preference number: 6 (lower is better) Translates to: HSVTPNVCPHQR*SEPPLGGTGPQ Trigger: CTGAGGCCCGGTACCGCCGAGAGGGGGCTCGCTTCATCTTTGATGTGGGCACACGTTTGGGGTTACACTATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS CCA 72 bp | GCAGGCTCTGATAGCCCTCTCCTGACATGTAGGAGCTaGTGGTGGACATCCCCGTCATGTAGCTGGAGGGTG | + |
Preference number: 6 (lower is better) Translates to: AGSDSPLLTCRS*WWTSPSCSWRV Trigger: CACCCTCCAGCTACATGACGGGGATGTCCACCACCAGCTCCTACATGTCAGGAGAGGGCTATCAGAGCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS CCA 72 bp | GCAGGGCACCATAGGAGGGGCCCTCCGTCTTCATCATaGACTGCAGGCTCTGATAGCCCTCTCCTGACATGT | + |
Preference number: 6 (lower is better) Translates to: AGHHRRGPPSSS*TAGSDSPLLTC Trigger: ACATGTCAGGAGAGGGCTATCAGAGCCTGCAGTCCATGATGAAGACGGAGGGCCCCTCCTATGGTGCCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS GCA 72 bp | GATGGTTTCTTGGGCTGTTGTGCTTGCTGCTGTTGCTaGTGGGCTGACTGCTGCGAGTCCTTCTGTGGAGGC | + |
Preference number: 6 (lower is better) Translates to: DGFLGCCACCCC*WADCCESFCGG Trigger: GCCTCCACAGAAGGACTCGCAGCAGTCAGCCCAGCAGCAACAGCAGCAAGCACAACAGCCCAAGAAACCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS TCA 72 bp | CTTCATCATGGACTGCAGGCTCTGATAGCCCTCTCCTaGCATGTAGGAGCTGGTGGTGGACATCCCCGTCAT | + |
Preference number: 6 (lower is better) Translates to: LHHGLQALIALS*HVGAGGGHPRH Trigger: ATGACGGGGATGTCCACCACCAGCTCCTACATGTCAGGAGAGGGCTATCAGAGCCTGCAGTCCATGATGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS CCA 72 bp | AGGCTTCCGGTCTGGAGGTGGGTGTGCTGGAGGCAATaGTGGGTGAGTAGCCTCAAGTTTGGGAATTTTAGG | + |
Preference number: 6 (lower is better) Translates to: RLPVWRWVCWRQ*WVSSLKFGNFR Trigger: CCTAAAATTCCCAAACTTGAGGCTACTCACCCACCATTGCCTCCAGCACACCCACCTCCAGACCGGAAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS TCA 72 bp | ACAAACGTCCCGCAAGATACATTACTGCGACAGCTATaGTCTCTGGTTCCCACTGCAGTGACAGGGTGGTGC | + |
Preference number: 6 (lower is better) Translates to: TNVPQDTLLRQL*SLVPTAVTGWC Trigger: GCACCACCCTGTCACTGCAGTGGGAACCAGAGATCATAGCTGTCGCAGTAATGTATCTTGCGGGACGTTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS GCA 72 bp | GTGGCTGGATCGAGTCCTTCAAGTTGTGAGGGTGTGTaGGCTAGGTCCTTCTTATCCCAGTACCAACATGGT | + |
Preference number: 6 (lower is better) Translates to: VAGSSPSSCEGV*ARSFLSQYQHG Trigger: ACCATGTTGGTACTGGGATAAGAAGGACCTAGCGCACACACCCTCACAACTTGAAGGACTCGATCCAGCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS CAA 72 bp | GTGGCAGATGTCTTCCAGAACGTCAACAGGGACATCTaGAACGAACTGCTCCCACCATCTCCTATACATGGG | + |
Preference number: 6 (lower is better) Translates to: VADVFQNVNRDI*NELLPPSPIHG Trigger: CCCATGTATAGGAGATGGTGGGAGCAGTTCGTTCAAGATGTCCCTGTTGACGTTCTGGAAGACATCTGCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS TCA 72 bp | TGGCAGATGTCTTCCAGAACGTCAACAGGGACATCTTaGACGAACTGCTCCCACCATCTCCTATACATGGGT | + |
Preference number: 6 (lower is better) Translates to: WQMSSRTSTGTS*TNCSHHLLYMG Trigger: ACCCATGTATAGGAGATGGTGGGAGCAGTTCGTTCAAGATGTCCCTGTTGACGTTCTGGAAGACATCTGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS GCA 72 bp | TACATTACTGCGACAGCTATGATCTCTGGTTCCCACTaGAGTGACAGGGTGGTGCAGAGACTGTCATTTACA | + |
Preference number: 6 (lower is better) Translates to: YITATAMISGSH*SDRVVQRLSFT Trigger: TGTAAATGACAGTCTCTGCACCACCCTGTCACTGCAGTGGGAACCAGAGATCATAGCTGTCGCAGTAATGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS TCA 72 bp | ACCAACATGGTTTTGTGTGGTCCAGGTTTGCTGACGTaGCTGAAGGGCTTGAGTTTTCTTTGTTCTCCTTCA | + |
Preference number: 6 (lower is better) Translates to: TNMVLCGPGLLT*LKGLSFLCSPS Trigger: TGAAGGAGAACAAAGAAAACTCAAGCCCTTCAGTCACGTCAGCAAACCTGGACCACACAAAACCATGTTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS GCA 72 bp | ACATGGGTTTGGAGGTCCACTCTTGTATTTCAAATTTaGACAAACGTCCCGCAAGATACATTACTGCGACAG | + |
Preference number: 6 (lower is better) Translates to: TWVWRSTLVFQI*TNVPQDTLLRQ Trigger: CTGTCGCAGTAATGTATCTTGCGGGACGTTTGTGCAAATTTGAAATACAAGAGTGGACCTCCAAACCCATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS CAA 72 bp | CCACCATCTCCTATACATGGGTTTGGAGGTCCACTCTaGTATTTCAAATTTGCACAAACGTCCCGCAAGATA | + |
Preference number: 6 (lower is better) Translates to: PPSPIHGFGGPL*YFKFAQTSRKI Trigger: TATCTTGCGGGACGTTTGTGCAAATTTGAAATACAAGAGTGGACCTCCAAACCCATGTATAGGAGATGGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS CAA 90 bp | CATCTCCTATACATGGGTTTGGAGGTCCACTCTTGTATTTCAAATTaGCACAAACGTCCCGCAAGATACATTACTGCGACAGCTATGATC | + |
Preference number: 6 (lower is better) Translates to: HLLYMGLEVHSCISN*HKRPARYITATAMI Trigger: GATCATAGCTGTCGCAGTAATGTATCTTGCGGGACGTTTGTGCAAATTTGAAATACAAGAGTGGACCTCCAAACCCATGTATAGGAGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS GCA 72 bp | AGCTGCTTTGCATATTTGAGCAGGAACTGGTACGGATaGTCTACTTGTAAGTCAAACTTTATGGTCTGCAGT | + |
Preference number: 6 (lower is better) Translates to: SCFAYLSRNWYG*STCKSNFMVCS Trigger: ACTGCAGACCATAAAGTTTGACTTACAAGTAGAGCATCCGTACCAGTTCCTGCTCAAATATGCAAAGCAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS CCA 72 bp | ACTTCTTCCTTTGGGTCATCTCCAAACTGGCCGAACTaGACATCATTTAATAAACTACGAGCCGTTTTGATG | + |
Preference number: 6 (lower is better) Translates to: TSSFGSSPNWPN*TSFNKLRAVLM Trigger: CATCAAAACGGCTCGTAGTTTATTAAATGATGTCCAGTTCGGCCAGTTTGGAGATGACCCAAAGGAAGAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS CAA 72 bp | TACATGGGTTTGGAGGTCCACTCTTGTATTTCAAATTaGCACAAACGTCCCGCAAGATACATTACTGCGACA | + |
Preference number: 6 (lower is better) Translates to: YMGLEVHSCISN*HKRPARYITAT Trigger: TGTCGCAGTAATGTATCTTGCGGGACGTTTGTGCAAATTTGAAATACAAGAGTGGACCTCCAAACCCATGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS CCA 72 bp | TCACCTTTGAGCTGCTTTGCATATTTGAGCAGGAACTaGTACGGATGCTCTACTTGTAAGTCAAACTTTATG | + |
Preference number: 6 (lower is better) Translates to: SPLSCFAYLSRN*YGCSTCKSNFM Trigger: CATAAAGTTTGACTTACAAGTAGAGCATCCGTACCAGTTCCTGCTCAAATATGCAAAGCAGCTCAAAGGTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS GCA 72 bp | CAGGGTGGTGCAGAGACTGTCATTTACAAATGTCCATaGCATTTGAACCAACTTCTGAATTTTGTTTTTATC | + |
Preference number: 6 (lower is better) Translates to: QGGAETVIYKCP*HLNQLLNFVFI Trigger: GATAAAAACAAAATTCAGAAGTTGGTTCAAATGGCATGGACATTTGTAAATGACAGTCTCTGCACCACCCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |
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CDS CAA 72 bp | ATTTTGTTTTTATCACCTTTGAGCTGCTTTGCATATTaGAGCAGGAACTGGTACGGATGCTCTACTTGTAAG | + |
Preference number: 6 (lower is better) Translates to: ILFLSPLSCFAY*SRNWYGCSTCK Trigger: CTTACAAGTAGAGCATCCGTACCAGTTCCTGCTCAAATATGCAAAGCAGCTCAAAGGTGATAAAAACAAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101055.5 ENSMUST00000221167.2 |