Pregenerated sensors for CCNJL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044707Ensembl transcript IDs: ENSMUST00000050574.7
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTTATGGGCTCAGTGCTCAGGCCTAAACACGGGCCATGGGACCCTTaGAGTGGAGCTAGGGAGAGAAAGACACTCAGGATGGATCTTCTA | + |
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Preference number: 1 (lower is better) Translates to: LMGSVLRPKHGPWDP*SGARERKTLRMDLL Trigger: TAGAAGATCCATCCTGAGTGTCTTTCTCTCCCTAGCTCCACTCCAAGGGTCCCATGGCCCGTGTTTAGGCCTGAGCACTGAGCCCATAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| 3UTR CCA 90 bp | GTTCAAAAACAAAGGGCAGGCAAGATAGCCACTTACTGTGCCTTATaGGCTCAGTGCTCAGGCCTAAACACGGGCCATGGGACCCTTGGA | + |
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Preference number: 1 (lower is better) Translates to: VQKQRAGKIATYCAL*AQCSGLNTGHGTLG Trigger: TCCAAGGGTCCCATGGCCCGTGTTTAGGCCTGAGCACTGAGCCCATAAGGCACAGTAAGTGGCTATCTTGCCTGCCCTTTGTTTTTGAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| 3UTR GCA 90 bp | TTGAGAAGTCCGGATGTATGCAGTCCTCACTGTCCAAGTCTGATATaGTCCATCGGATCCGCAGTTCAGGGGAAAGGTCACAGAGCCATG | + |
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Preference number: 1 (lower is better) Translates to: LRSPDVCSPHCPSLI*SIGSAVQGKGHRAM Trigger: CATGGCTCTGTGACCTTTCCCCTGAACTGCGGATCCGATGGAGCATATCAGACTTGGACAGTGAGGACTGCATACATCCGGACTTCTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| 3UTR GCA 90 bp | ATGTCTTTGTCCTCCAGGCATACACGGAAGGATTTCCCAGAGAGATaGTGTTGGGCGTATCCCTGGATGTTTTGTTCTGTTGATTTGTTT | + |
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Preference number: 1 (lower is better) Translates to: MSLSSRHTRKDFPER*CWAYPWMFCSVDLF Trigger: AAACAAATCAACAGAACAAAACATCCAGGGATACGCCCAACAGCATCTCTCTGGGAAATCCTTCCGTGTATGCCTGGAGGACAAAGACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| 3UTR CCA 90 bp | ACTCAAGTCTGGGATCAGTTTAACCTCAGCACTAAAAGCAAGTGGTaGAGGGAAGTAAGGGCCAGTTCAAACCTTTGTCTCCTTCAAACA | + |
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Preference number: 1 (lower is better) Translates to: TQVWDQFNLSTKSKW*REVRASSNLCLLQT Trigger: TGTTTGAAGGAGACAAAGGTTTGAACTGGCCCTTACTTCCCTCCACCACTTGCTTTTAGTGCTGAGGTTAAACTGATCCCAGACTTGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| 3UTR CCA 90 bp | CAAACTCAAGTCTGGGATCAGTTTAACCTCAGCACTAAAAGCAAGTaGTGGAGGGAAGTAAGGGCCAGTTCAAACCTTTGTCTCCTTCAA | + |
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Preference number: 1 (lower is better) Translates to: QTQVWDQFNLSTKSK*WREVRASSNLCLLQ Trigger: TTGAAGGAGACAAAGGTTTGAACTGGCCCTTACTTCCCTCCACCACTTGCTTTTAGTGCTGAGGTTAAACTGATCCCAGACTTGAGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| 3UTR CAA 90 bp | TCCATCGGATCCGCAGTTCAGGGGAAAGGTCACAGAGCCATGTCTTaGTCCTCCAGGCATACACGGAAGGATTTCCCAGAGAGATGCTGT | + |
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Preference number: 2 (lower is better) Translates to: SIGSAVQGKGHRAMS*SSRHTRKDFPERCC Trigger: ACAGCATCTCTCTGGGAAATCCTTCCGTGTATGCCTGGAGGACAAAGACATGGCTCTGTGACCTTTCCCCTGAACTGCGGATCCGATGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| 3UTR-3UTR TCA 90 bp | TCCATCGGATCCGCAGTTCAGGGGAAAGGTCACAGAGCCATGTCTTTGTCCTCCTCTGTCCCACCTGGATaGGCTCTCCTCTTAGGTATT | + |
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Preference number: 2 (lower is better) Translates to: SIGSAVQGKGHRAMSLSSSVPPG*ALLLGI Trigger: AATACCTAAGAGGAGAGCTCATCCAGGTGGGACAGA...GGAGGACAAAGACATGGCTCTGTGACCTTTCCCCTGAACTGCGGATCCGATGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| 3UTR-3UTR CCA 90 bp | ACGGGCCATGGGACCCTTGGAGTGGAGCTAGGGAGAGAAAGACACTCAGGATGGTTTACTTCCTTTGTCTaGATCTTTCAGGATTCTCCC | + |
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Preference number: 2 (lower is better) Translates to: TGHGTLGVELGRERHSGWFTSFV*IFQDSP Trigger: GGGAGAATCCTGAAAGATCCAGACAAAGGAAGTAAA...CCATCCTGAGTGTCTTTCTCTCCCTAGCTCCACTCCAAGGGTCCCATGGCCCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| 3UTR-3UTR CCA 90 bp | TCCATCGGATCCGCAGTTCAGGGGAAAGGTCACAGAGCCATGTCTTTGTCCTCCTGTTGGGCGTATCCCTaGATGTTTTGTTCTGTTGAT | + |
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Preference number: 2 (lower is better) Translates to: SIGSAVQGKGHRAMSLSSCWAYP*MFCSVD Trigger: ATCAACAGAACAAAACATCCAGGGATACGCCCAACA...GGAGGACAAAGACATGGCTCTGTGACCTTTCCCCTGAACTGCGGATCCGATGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| 3UTR-3UTR CCA 90 bp | TTTAACCTCAGCACTAAAAGCAAGTGGTGGAGGGAAGTAAGGGCCAGTTCAAACGTTCTCTGTCCCACCTaGATGAGCTCTCCTCTTAGG | + |
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Preference number: 2 (lower is better) Translates to: FNLSTKSKWWREVRASSNVLCPT*MSSPLR Trigger: CCTAAGAGGAGAGCTCATCCAGGTGGGACAGAGAAC...GTTTGAACTGGCCCTTACTTCCCTCCACCACTTGCTTTTAGTGCTGAGGTTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| 3UTR-3UTR GCA 90 bp | TTTAACCTCAGCACTAAAAGCAAGTGGTGGAGGGAAGTAAGGGCCAGTTCAAACGACAGACGTGTCAGGTaGCCCTTCTTTTTCAGTGGT | + |
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Preference number: 2 (lower is better) Translates to: FNLSTKSKWWREVRASSNDRRVR*PFFFSG Trigger: ACCACTGAAAAAGAAGGGGCACCTGACACGTCTGTC...GTTTGAACTGGCCCTTACTTCCCTCCACCACTTGCTTTTAGTGCTGAGGTTAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| 3UTR-3UTR CCA 90 bp | ATATTGCACATGGTGACAGTGTTCCTGAGCCCTCGCACTGCAAATCCCAGACATCAGTTGGTCCCAAGTTaGATTAATAAAAGATACAGC | + |
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Preference number: 2 (lower is better) Translates to: ILHMVTVFLSPRTANPRHQLVPS*INKRYS Trigger: GCTGTATCTTTTATTAATCCAACTTGGGACCAACTG...ATGTCTGGGATTTGCAGTGCGAGGGCTCAGGAACACTGTCACCATGTGCAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| 3UTR CAA 90 bp | CCTCCCCACTTTTCTAATATTCCACAGTATGACTACCCTTTAGTATaGGCCAAACTCAAGTCTGGGATCAGTTTAACCTCAGCACTAAAA | + |
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Preference number: 2 (lower is better) Translates to: PPHFSNIPQYDYPLV*AKLKSGISLTSALK Trigger: TTTTAGTGCTGAGGTTAAACTGATCCCAGACTTGAGTTTGGCCAATACTAAAGGGTAGTCATACTGTGGAATATTAGAAAAGTGGGGAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| 3UTR GCA 72 bp | GGCAAGATAGCCACTTACTGTGCCTTATGGGCTCAGTaGTCAGGCCTAAACACGGGCCATGGGACCCTTGGA | + |
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Preference number: 3 (lower is better) Translates to: GKIATYCALWAQ*SGLNTGHGTLG Trigger: TCCAAGGGTCCCATGGCCCGTGTTTAGGCCTGAGCACTGAGCCCATAAGGCACAGTAAGTGGCTATCTTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| 3UTR CCA 72 bp | CTTATGGGCTCAGTGCTCAGGCCTAAACACGGGCCATaGGACCCTTGGAGTGGAGCTAGGGAGAGAAAGACA | + |
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Preference number: 3 (lower is better) Translates to: LMGSVLRPKHGP*DPWSGARERKT Trigger: TGTCTTTCTCTCCCTAGCTCCACTCCAAGGGTCCCATGGCCCGTGTTTAGGCCTGAGCACTGAGCCCATAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| 3UTR GCA 72 bp | CCGGATGTATGCAGTCCTCACTGTCCAAGTCTGATATaGTCCATCGGATCCGCAGTTCAGGGGAAAGGTCAC | + |
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Preference number: 3 (lower is better) Translates to: PDVCSPHCPSLI*SIGSAVQGKGH Trigger: GTGACCTTTCCCCTGAACTGCGGATCCGATGGAGCATATCAGACTTGGACAGTGAGGACTGCATACATCCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| 3UTR TCA 72 bp | GAAGTCCGGATGTATGCAGTCCTCACTGTCCAAGTCTaGTATGCTCCATCGGATCCGCAGTTCAGGGGAAAG | + |
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Preference number: 3 (lower is better) Translates to: EVRMYAVLTVQV*YAPSDPQFRGK Trigger: CTTTCCCCTGAACTGCGGATCCGATGGAGCATATCAGACTTGGACAGTGAGGACTGCATACATCCGGACTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| 3UTR CCA 72 bp | AGTGTTCCTGAGCCCTCGCACTGCAAATCCCAGACATaGGCTTTTGCTCTAGCAATCTCTTGCCTGTCAACG | + |
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Preference number: 3 (lower is better) Translates to: SVPEPSHCKSQT*AFALAISCLST Trigger: CGTTGACAGGCAAGAGATTGCTAGAGCAAAAGCCCATGTCTGGGATTTGCAGTGCGAGGGCTCAGGAACACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| 3UTR GCA 72 bp | ATTGCACATGGTGACAGTGTTCCTGAGCCCTCGCACTaGAAATCCCAGACATGGGCTTTTGCTCTAGCAATC | + |
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Preference number: 3 (lower is better) Translates to: IAHGDSVPEPSH*KSQTWAFALAI Trigger: GATTGCTAGAGCAAAAGCCCATGTCTGGGATTTGCAGTGCGAGGGCTCAGGAACACTGTCACCATGTGCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| 3UTR GCA 72 bp | TCCTCCAGGCATACACGGAAGGATTTCCCAGAGAGATaGTGTTGGGCGTATCCCTGGATGTTTTGTTCTGTT | + |
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Preference number: 3 (lower is better) Translates to: SSRHTRKDFPER*CWAYPWMFCSV Trigger: AACAGAACAAAACATCCAGGGATACGCCCAACAGCATCTCTCTGGGAAATCCTTCCGTGTATGCCTGGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| 3UTR CCA 72 bp | TGGGATCAGTTTAACCTCAGCACTAAAAGCAAGTGGTaGAGGGAAGTAAGGGCCAGTTCAAACCTTTGTCTC | + |
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Preference number: 3 (lower is better) Translates to: WDQFNLSTKSKW*REVRASSNLCL Trigger: GAGACAAAGGTTTGAACTGGCCCTTACTTCCCTCCACCACTTGCTTTTAGTGCTGAGGTTAAACTGATCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| 3UTR CCA 72 bp | GTCTGGGATCAGTTTAACCTCAGCACTAAAAGCAAGTaGTGGAGGGAAGTAAGGGCCAGTTCAAACCTTTGT | + |
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Preference number: 3 (lower is better) Translates to: VWDQFNLSTKSK*WREVRASSNLC Trigger: ACAAAGGTTTGAACTGGCCCTTACTTCCCTCCACCACTTGCTTTTAGTGCTGAGGTTAAACTGATCCCAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| 3UTR TCA 72 bp | TTGTTTCTGTGGTCTTTTGCACCTCCCTTCCAATTCTaGTGGGTGAACAGCATGTCCCCTGACCAAGAAAAA | + |
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Preference number: 3 (lower is better) Translates to: LFLWSFAPPFQF*WVNSMSPDQEK Trigger: TTTTTCTTGGTCAGGGGACATGCTGTTCACCCATCAGAATTGGAAGGGAGGTGCAAAAGACCACAGAAACAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| 3UTR TCA 72 bp | CTACTTAAAGGTACTAGGTTCTCTGTCCCACCTGGATaGGCTCTCCTCTTAGGTATTTACTTCCTTTGTCTG | + |
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Preference number: 3 (lower is better) Translates to: LLKGTRFSVPPG*ALLLGIYFLCL Trigger: CAGACAAAGGAAGTAAATACCTAAGAGGAGAGCTCATCCAGGTGGGACAGAGAACCTAGTACCTTTAAGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| 3UTR-3UTR CAA 90 bp | TTTAACCTCAGCACTAAAAGCAAGTGGTGGAGGGAAGTAAGGGCCAGTTCAAACAGGTATTTACTTCCTTaGTCTGGATCTTTCAGGATT | + |
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Preference number: 3 (lower is better) Translates to: FNLSTKSKWWREVRASSNRYLLP*SGSFRI Trigger: AATCCTGAAAGATCCAGACAAAGGAAGTAAATACCT...GTTTGAACTGGCCCTTACTTCCCTCCACCACTTGCTTTTAGTGCTGAGGTTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS-3UTR CCA 90 bp | ACGGGCCATGGGACCCTTGGAGTGGAGCTAGGGAGAGAAAGACACTCAGGATGGGGTCCAGAAGGTAGATaGCCAGGTGCCGGGCCGAGG | + |
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Preference number: 4 (lower is better) Translates to: TGHGTLGVELGRERHSGWGPEGR*PGAGPR Trigger: CCTCGGCCCGGCACCTGGCCATCTACCTTCTGGACC...CCATCCTGAGTGTCTTTCTCTCCCTAGCTCCACTCCAAGGGTCCCATGGCCCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS-3UTR CCA 90 bp | ACGGGCCATGGGACCCTTGGAGTGGAGCTAGGGAGAGAAAGACACTCAGGATGGGGCCAGGCGTGGCAGTaGTGGTCCTTCTGGCTGATG | + |
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Preference number: 4 (lower is better) Translates to: TGHGTLGVELGRERHSGWGQAWQ*WSFWLM Trigger: CATCAGCCAGAAGGACCACCACTGCCACGCCTGGCC...CCATCCTGAGTGTCTTTCTCTCCCTAGCTCCACTCCAAGGGTCCCATGGCCCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS-3UTR CCA 90 bp | ACGGGCCATGGGACCCTTGGAGTGGAGCTAGGGAGAGAAAGACACTCAGGATGGTCTTTCGGAGGCAGGTaGTGGGCCAGGCGTGGCAGT | + |
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Preference number: 4 (lower is better) Translates to: TGHGTLGVELGRERHSGWSFGGR*WARRGS Trigger: ACTGCCACGCCTGGCCCACCACCTGCCTCCGAAAGA...CCATCCTGAGTGTCTTTCTCTCCCTAGCTCCACTCCAAGGGTCCCATGGCCCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS-3UTR CCA 90 bp | TCCATCGGATCCGCAGTTCAGGGGAAAGGTCACAGAGCCATGTCTTTGTCCTCCGCCGAGGGGCAGAGATaGCAGTGTCTGCTCAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: SIGSAVQGKGHRAMSLSSAEGQR*QCLLSR Trigger: CCTGCTGAGCAGACACTGCCATCTCTGCCCCTCGGC...GGAGGACAAAGACATGGCTCTGTGACCTTTCCCCTGAACTGCGGATCCGATGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS-3UTR CCA 90 bp | CAGGGGAAAGGTCACAGAGCCATGTCTTTGTCCTCCAGGCATACACGGAAGGATAGGCCCCCTGAACGGTaGGCCTGCAACGAGTCCCGA | + |
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Preference number: 4 (lower is better) Translates to: QGKGHRAMSLSSRHTRKDRPPER*ACNESR Trigger: TCGGGACTCGTTGCAGGCCCACCGTTCAGGGGGCCT...ATCCTTCCGTGTATGCCTGGAGGACAAAGACATGGCTCTGTGACCTTTCCCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS-3UTR CCA 90 bp | ACGGGCCATGGGACCCTTGGAGTGGAGCTAGGGAGAGAAAGACACTCAGGATGGCACATATCCAAGGGCTaGAGGGTTGGGTATGGCGTG | + |
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Preference number: 4 (lower is better) Translates to: TGHGTLGVELGRERHSGWHISKG*RVGYGV Trigger: CACGCCATACCCAACCCTCCAGCCCTTGGATATGTG...CCATCCTGAGTGTCTTTCTCTCCCTAGCTCCACTCCAAGGGTCCCATGGCCCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS-3UTR GCA 90 bp | TTTGTCCTCCAGGCATACACGGAAGGATTTCCCAGAGAGATGCTGTTGGGCGTAGGCCCCAACACAGGCTaGAGCAACCACGGAAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: FVLQAYTEGFPREMLLGVGPNTG*SNHGRL Trigger: CAGCCTTCCGTGGTTGCTGCAGCCTGTGTTGGGGCC...TACGCCCAACAGCATCTCTCTGGGAAATCCTTCCGTGTATGCCTGGAGGACAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS-3UTR GCA 90 bp | TCCATCGGATCCGCAGTTCAGGGGAAAGGTCACAGAGCCATGTCTTTGTCCTCCGCCAAGCACAAGTCCTaGGCTGGACTCTGGAACTGG | + |
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Preference number: 4 (lower is better) Translates to: SIGSAVQGKGHRAMSLSSAKHKS*AGLWNW Trigger: CCAGTTCCAGAGTCCAGCGCAGGACTTGTGCTTGGC...GGAGGACAAAGACATGGCTCTGTGACCTTTCCCCTGAACTGCGGATCCGATGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS-3UTR GCA 90 bp | TCGGATCCGCAGTTCAGGGGAAAGGTCACAGAGCCATGTCTTTGTCCTCCAGGCCAACGAGTCCCGATATaGCAAGCACAAGTCCTGCGC | + |
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Preference number: 4 (lower is better) Translates to: SDPQFRGKVTEPCLCPPGQRVPI*QAQVLR Trigger: GCGCAGGACTTGTGCTTGGCATATCGGGACTCGTTG...GCCTGGAGGACAAAGACATGGCTCTGTGACCTTTCCCCTGAACTGCGGATCCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS-3UTR CCA 90 bp | TCGGATCCGCAGTTCAGGGGAAAGGTCACAGAGCCATGTCTTTGTCCTCCAGGCAGTGGGCACGGAAGGTaGGCAGCTTCAGTTCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: SDPQFRGKVTEPCLCPPGSGHGR*AASVPS Trigger: AGAAGGAACTGAAGCTGCCCACCTTCCGTGCCCACT...GCCTGGAGGACAAAGACATGGCTCTGTGACCTTTCCCCTGAACTGCGGATCCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS-3UTR CCA 90 bp | ATATTGCACATGGTGACAGTGTTCCTGAGCCCTCGCACTGCAAATCCCAGACATGTGGTGGGCCAGGCGTaGCAGTGGTGGTCCTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: ILHMVTVFLSPRTANPRHVVGQA*QWWSFW Trigger: CCAGAAGGACCACCACTGCCACGCCTGGCCCACCAC...ATGTCTGGGATTTGCAGTGCGAGGGCTCAGGAACACTGTCACCATGTGCAATAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS-3UTR CCA 90 bp | TCGGATCCGCAGTTCAGGGGAAAGGTCACAGAGCCATGTCTTTGTCCTCCAGGCCCCTCTGCAAGTCTCTaGTCCAGTAGGGAGACAGCT | + |
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Preference number: 4 (lower is better) Translates to: SDPQFRGKVTEPCLCPPGPSASL*SSRETA Trigger: AGCTGTCTCCCTACTGGACCAGAGACTTGCAGAGGG...GCCTGGAGGACAAAGACATGGCTCTGTGACCTTTCCCCTGAACTGCGGATCCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| 3UTR CAA 72 bp | CCAGGGGGCAGTAATCCAAGTCCAATAGGCGAACACTaGCATCCCAGGGGTGGACTCTTGCAAAGTGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: PGGSNPSPIGEH*HPRGGLLQSEP Trigger: AGGCTCACTTTGCAAGAGTCCACCCCTGGGATGCAAGTGTTCGCCTATTGGACTTGGATTACTGCCCCCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS-3UTR TCA 90 bp | TTCAGGGGAAAGGTCACAGAGCCATGTCTTTGTCCTCCAGGCATACACGGAAGGACATATGGCTGCCGCTaGAGTAGCTGCTTCCGTAGG | + |
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Preference number: 4 (lower is better) Translates to: FRGKVTEPCLCPPGIHGRTYGCR*SSCFRR Trigger: CCTACGGAAGCAGCTACTTCAGCGGCAGCCATATGT...CCTTCCGTGTATGCCTGGAGGACAAAGACATGGCTCTGTGACCTTTCCCCTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS-3UTR GCA 90 bp | ATATTGCACATGGTGACAGTGTTCCTGAGCCCTCGCACTGCAAATCCCAGACATCCTTCTCGCGCAGAGTaGAGTGTACGTCCGAGGCGA | + |
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Preference number: 4 (lower is better) Translates to: ILHMVTVFLSPRTANPRHPSRAE*SVRPRR Trigger: TCGCCTCGGACGTACACTGCACTCTGCGCGAGAAGG...ATGTCTGGGATTTGCAGTGCGAGGGCTCAGGAACACTGTCACCATGTGCAATAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS-3UTR GCA 90 bp | ATATTGCACATGGTGACAGTGTTCCTGAGCCCTCGCACTGCAAATCCCAGACATCCTGAACGGTGGGCCTaGAACGAGTCCCGATATGCC | + |
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Preference number: 4 (lower is better) Translates to: ILHMVTVFLSPRTANPRHPERWA*NESRYA Trigger: GGCATATCGGGACTCGTTGCAGGCCCACCGTTCAGG...ATGTCTGGGATTTGCAGTGCGAGGGCTCAGGAACACTGTCACCATGTGCAATAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS-3UTR CCA 90 bp | TTTAACCTCAGCACTAAAAGCAAGTGGTGGAGGGAAGTAAGGGCCAGTTCAAACTTCAGGAGCGGGGAGTaGGCACGGAAGGTGGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: FNLSTKSKWWREVRASSNFRSGE*ARKVGS Trigger: GCTGCCCACCTTCCGTGCCCACTCCCCGCTCCTGAA...GTTTGAACTGGCCCTTACTTCCCTCCACCACTTGCTTTTAGTGCTGAGGTTAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS-3UTR CCA 90 bp | ATATTGCACATGGTGACAGTGTTCCTGAGCCCTCGCACTGCAAATCCCAGACATGCTGAAGGCAGATCCTaGAGGCCCCAACACAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: ILHMVTVFLSPRTANPRHAEGRS*RPQHRL Trigger: CAGCCTGTGTTGGGGCCTCCAGGATCTGCCTTCAGC...ATGTCTGGGATTTGCAGTGCGAGGGCTCAGGAACACTGTCACCATGTGCAATAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS-3UTR GCA 90 bp | ACGGGCCATGGGACCCTTGGAGTGGAGCTAGGGAGAGAAAGACACTCAGGATGGGGGAGAAGTTTTGGCTaGTCAGGATCCTTGTATTGT | + |
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Preference number: 4 (lower is better) Translates to: TGHGTLGVELGRERHSGWGRSFG*SGSLYC Trigger: ACAATACAAGGATCCTGAGCAGCCAAAACTTCTCCC...CCATCCTGAGTGTCTTTCTCTCCCTAGCTCCACTCCAAGGGTCCCATGGCCCGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS-3UTR GCA 90 bp | ATGTCTTTGTCCTCCAGGCATACACGGAAGGATTTCCCAGAGAGATGCTGTTGGCTGCATGCTAAGGGATaGAGGGACGGGCACAGGACA | + |
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Preference number: 4 (lower is better) Translates to: MSLSSRHTRKDFPERCCWLHAKG*RDGHRT Trigger: TGTCCTGTGCCCGTCCCTGCATCCCTTAGCATGCAG...CCAACAGCATCTCTCTGGGAAATCCTTCCGTGTATGCCTGGAGGACAAAGACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS-3UTR CCA 90 bp | CAGGGGAAAGGTCACAGAGCCATGTCTTTGTCCTCCAGGCATACACGGAAGGATGGAGCAGAAGTTCTGTaGTCAGCAGCTCCTTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: QGKGHRAMSLSSRHTRKDGAEVL*SAAPSW Trigger: CCAAGAAGGAGCTGCTGACCACAGAACTTCTGCTCC...ATCCTTCCGTGTATGCCTGGAGGACAAAGACATGGCTCTGTGACCTTTCCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS-3UTR TCA 90 bp | TTCAGGGGAAAGGTCACAGAGCCATGTCTTTGTCCTCCAGGCATACACGGAAGGTTTCGATACACGTGCTaGGATGCTCTAGGGAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: FRGKVTEPCLCPPGIHGRFRYTC*DALGSS Trigger: GCTACTCCCTAGAGCATCTCAGCACGTGTATCGAAA...CCTTCCGTGTATGCCTGGAGGACAAAGACATGGCTCTGTGACCTTTCCCCTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS-3UTR GCA 90 bp | CAGGGGAAAGGTCACAGAGCCATGTCTTTGTCCTCCAGGCATACACGGAAGGATGTCTTCAAACTTACTTaGCAGCAGGAGGCAGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: QGKGHRAMSLSSRHTRKDVFKLT*QQEAGD Trigger: GTCTCCTGCCTCCTGCTGGCAAGTAAGTTTGAAGAC...ATCCTTCCGTGTATGCCTGGAGGACAAAGACATGGCTCTGTGACCTTTCCCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS-3UTR GCA 90 bp | ATATTGCACATGGTGACAGTGTTCCTGAGCCCTCGCACTGCAAATCCCAGACATCGTCTGGCTCTTGACTaGAACGGCATCCTTGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: ILHMVTVFLSPRTANPRHRLALD*NGILED Trigger: GTCCTCAAGGATGCCGTTGCAGTCAAGAGCCAGACG...ATGTCTGGGATTTGCAGTGCGAGGGCTCAGGAACACTGTCACCATGTGCAATAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS-3UTR CCA 90 bp | TCCATCGGATCCGCAGTTCAGGGGAAAGGTCACAGAGCCATGTCTTTGTCCTCCGTGAGGGAGAAGTTTTaGCTGCTCAGGATCCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SIGSAVQGKGHRAMSLSSVREKF*LLRILV Trigger: TACAAGGATCCTGAGCAGCCAAAACTTCTCCCTCAC...GGAGGACAAAGACATGGCTCTGTGACCTTTCCCCTGAACTGCGGATCCGATGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS-3UTR CCA 90 bp | TTCAGGGGAAAGGTCACAGAGCCATGTCTTTGTCCTCCAGGCATACACGGAAGGGTGGTGATGTTGTACTaGTCCATGAAGTGGTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FRGKVTEPCLCPPGIHGRVVMLY*SMKWSR Trigger: TCTGGACCACTTCATGGACCAGTACAACATCACCAC...CCTTCCGTGTATGCCTGGAGGACAAAGACATGGCTCTGTGACCTTTCCCCTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS-3UTR TCA 90 bp | ATGTCTTTGTCCTCCAGGCATACACGGAAGGATTTCCCAGAGAGATGCTGTTGGCTGCAACGGCATCCTTaGGGACATTGTCATAGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: MSLSSRHTRKDFPERCCWLQRHP*GHCHRL Trigger: TAGCCTATGACAATGTCCTCAAGGATGCCGTTGCAG...CCAACAGCATCTCTCTGGGAAATCCTTCCGTGTATGCCTGGAGGACAAAGACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS-3UTR GCA 90 bp | TTTAACCTCAGCACTAAAAGCAAGTGGTGGAGGGAAGTAAGGGCCAGTTCAAACGCTGCTATGGCCATCTaGATGCTAAGGGATGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FNLSTKSKWWREVRASSNAAMAI*MLRDAG Trigger: CCCTGCATCCCTTAGCATGCAGATGGCCATAGCAGC...GTTTGAACTGGCCCTTACTTCCCTCCACCACTTGCTTTTAGTGCTGAGGTTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
||
| CDS-3UTR TCA 90 bp | ATATTGCACATGGTGACAGTGTTCCTGAGCCCTCGCACTGCAAATCCCAGACATAGTGAGCATACTCCTTaGGGCACTCTTTGGTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ILHMVTVFLSPRTANPRHSEHTP*GTLWSF Trigger: GAAAGACCAAAGAGTGCCTCAAGGAGTATGCTCACT...ATGTCTGGGATTTGCAGTGCGAGGGCTCAGGAACACTGTCACCATGTGCAATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
||
| CDS-3UTR TCA 90 bp | ATAAAAGATACAGCCTCATGTGGGACAGACAGACAGTGTGGCAATTCAAACTTTGGTGGTCCTTCTGGCTaGTGGAGGCCAAGAGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: IKDTASCGTDRQCGNSNFGGPSG*WRPRGS Trigger: ACTACCTCTTGGCCTCCATCAGCCAGAAGGACCACC...AAAGTTTGAATTGCCACACTGTCTGTCTGTCCCACATGAGGCTGTATCTTTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
||
| CDS-3UTR GCA 90 bp | ATAAAAGATACAGCCTCATGTGGGACAGACAGACAGTGTGGCAATTCAAACTTTGAGGCCGTAAGGCAGTaGCTGGGTTCAGCTGCTATG | + |
|
Preference number: 4 (lower is better) Translates to: IKDTASCGTDRQCGNSNFEAVRQ*LGSAAM Trigger: CATAGCAGCTGAACCCAGGCACTGCCTTACGGCCTC...AAAGTTTGAATTGCCACACTGTCTGTCTGTCCCACATGAGGCTGTATCTTTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS-3UTR CCA 90 bp | ATAAAAGATACAGCCTCATGTGGGACAGACAGACAGTGTGGCAATTCAAACTTTCAGTGGTGGTCCTTCTaGCTGATGGAGGCCAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: IKDTASCGTDRQCGNSNFQWWSF*LMEAKR Trigger: CCTCTTGGCCTCCATCAGCCAGAAGGACCACCACTG...AAAGTTTGAATTGCCACACTGTCTGTCTGTCCCACATGAGGCTGTATCTTTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS-3UTR GCA 90 bp | CCAGAGAGATGCTGTTGGGCGTATCCCTGGATGTTTTGTTCTGTTGATTTGTTTGCCACAGTATACAGCTaGTTGGAGGTGGTGATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PERCCWAYPWMFCSVDLFATVYS*LEVVML Trigger: CAACATCACCACCTCCAAGCAGCTGTATACTGTGGC...AAACAAATCAACAGAACAAAACATCCAGGGATACGCCCAACAGCATCTCTCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
||
| CDS-3UTR GCA 90 bp | ATAAAAGATACAGCCTCATGTGGGACAGACAGACAGTGTGGCAATTCAAACTTTGCTGTCGAAACAGCCTaGAGGGAACATATGGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: IKDTASCGTDRQCGNSNFAVETA*REHMAA Trigger: GGCAGCCATATGTTCCCTGCAGGCTGTTTCGACAGC...AAAGTTTGAATTGCCACACTGTCTGTCTGTCCCACATGAGGCTGTATCTTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
||
| 3UTR CAA 72 bp | TTTTCTAATATTCCACAGTATGACTACCCTTTAGTATaGGCCAAACTCAAGTCTGGGATCAGTTTAACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FSNIPQYDYPLV*AKLKSGISLTS Trigger: TGAGGTTAAACTGATCCCAGACTTGAGTTTGGCCAATACTAAAGGGTAGTCATACTGTGGAATATTAGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
||
| CDS TCA 90 bp | GCGCTGGACTCTGGAACTGGGCTAGAGTTGTTGGCGGTGGCTGGCTaGGAGTCGGGTAGGTGGGCGGTTGGAACAGCACTTGGGCGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ALDSGTGLELLAVAG*ESGRWAVGTALGRE Trigger: CTCCCGCCCAAGTGCTGTTCCAACCGCCCACCTACCCGACTCTCAGCCAGCCACCGCCAACAACTCTAGCCCAGTTCCAGAGTCCAGCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
||
| CDS GCA 90 bp | GATGGACCAGTGTCTCCTGAGAGCAGGCCCCCTGAACGGTGGGCCTaGAACGAGTCCCGATATGCCAAGCACAAGTCCTGCGCTGGACTC | + |
|
Preference number: 5 (lower is better) Translates to: DGPVSPESRPPERWA*NESRYAKHKSCAGL Trigger: GAGTCCAGCGCAGGACTTGTGCTTGGCATATCGGGACTCGTTGCAGGCCCACCGTTCAGGGGGCCTGCTCTCAGGAGACACTGGTCCATC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS CCA 90 bp | TGGAGGGATGGACCAGTGTCTCCTGAGAGCAGGCCCCCTGAACGGTaGGCCTGCAACGAGTCCCGATATGCCAAGCACAAGTCCTGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: WRDGPVSPESRPPER*ACNESRYAKHKSCA Trigger: AGCGCAGGACTTGTGCTTGGCATATCGGGACTCGTTGCAGGCCCACCGTTCAGGGGGCCTGCTCTCAGGAGACACTGGTCCATCCCTCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS CCA 90 bp | GGCACAGGACACATATCCAAGGGCTGGAGGGTTGGGTATGGCGTGTaGAGGGATGGACCAGTGTCTCCTGAGAGCAGGCCCCCTGAACGG | + |
|
Preference number: 5 (lower is better) Translates to: GTGHISKGWRVGYGV*RDGPVSPESRPPER Trigger: CCGTTCAGGGGGCCTGCTCTCAGGAGACACTGGTCCATCCCTCCACACGCCATACCCAACCCTCCAGCCCTTGGATATGTGTCCTGTGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS GCA 90 bp | GAACGGTGGGCCTGCAACGAGTCCCGATATGCCAAGCACAAGTCCTaGGCTGGACTCTGGAACTGGGCTAGAGTTGTTGGCGGTGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ERWACNESRYAKHKS*AGLWNWARVVGGGW Trigger: CCAGCCACCGCCAACAACTCTAGCCCAGTTCCAGAGTCCAGCGCAGGACTTGTGCTTGGCATATCGGGACTCGTTGCAGGCCCACCGTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
||
| CDS GCA 90 bp | GTAGCTGCTTCCGTAGGAGGCCGTAAGGCAGTGCCTGGGTTCAGCTaGTATGGCCATCTGCATGCTAAGGGATGCAGGGACGGGCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: VAASVGGRKAVPGFS*YGHLHAKGCRDGHR Trigger: CCTGTGCCCGTCCCTGCATCCCTTAGCATGCAGATGGCCATAGCAGCTGAACCCAGGCACTGCCTTACGGCCTCCTACGGAAGCAGCTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS GCA 90 bp | GCAGTGCCTGGGTTCAGCTGCTATGGCCATCTGCATGCTAAGGGATaGAGGGACGGGCACAGGACACATATCCAAGGGCTGGAGGGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: AVPGFSCYGHLHAKG*RDGHRTHIQGLEGW Trigger: CCAACCCTCCAGCCCTTGGATATGTGTCCTGTGCCCGTCCCTGCATCCCTTAGCATGCAGATGGCCATAGCAGCTGAACCCAGGCACTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS CCA 90 bp | TGCAACGAGTCCCGATATGCCAAGCACAAGTCCTGCGCTGGACTCTaGAACTGGGCTAGAGTTGTTGGCGGTGGCTGGCTGAGAGTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: CNESRYAKHKSCAGL*NWARVVGGGWLRVG Trigger: CCCGACTCTCAGCCAGCCACCGCCAACAACTCTAGCCCAGTTCCAGAGTCCAGCGCAGGACTTGTGCTTGGCATATCGGGACTCGTTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
||
| CDS GCA 90 bp | GGTAGATGGCCAGGTGCCGGGCCGAGGGGCAGAGATGGCAGTGTCTaGTCAGCAGGGTCAGAATGTCTACAAAGAATCGACGGCTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: GRWPGAGPRGRDGSV*SAGSECLQRIDGSS Trigger: TGAAGAGCCGTCGATTCTTTGTAGACATTCTGACCCTGCTGAGCAGACACTGCCATCTCTGCCCCTCGGCCCGGCACCTGGCCATCTACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS CCA 90 bp | ATGCTAAGGGATGCAGGGACGGGCACAGGACACATATCCAAGGGCTaGAGGGTTGGGTATGGCGTGTGGAGGGATGGACCAGTGTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: MLRDAGTGTGHISKG*RVGYGVWRDGPVSP Trigger: AGGAGACACTGGTCCATCCCTCCACACGCCATACCCAACCCTCCAGCCCTTGGATATGTGTCCTGTGCCCGTCCCTGCATCCCTTAGCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS CCA 90 bp | GTCAGAATGTCTACAAAGAATCGACGGCTCTTCAGGAGCGGGGAGTaGGCACGGAAGGTGGGCAGCTTCAGTTCCTTCTCGCGCAGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: VRMSTKNRRLFRSGE*ARKVGSFSSFSRRV Trigger: CACTCTGCGCGAGAAGGAACTGAAGCTGCCCACCTTCCGTGCCCACTCCCCGCTCCTGAAGAGCCGTCGATTCTTTGTAGACATTCTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS-3UTR CAA 90 bp | TCCATCGGATCCGCAGTTCAGGGGAAAGGTCACAGAGCCATGTCTTTGTCCTCCGCCAGCGTCTGGCTCTaGACTGCAACGGCATCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SIGSAVQGKGHRAMSLSSASVWL*TATASL Trigger: CAAGGATGCCGTTGCAGTCAAGAGCCAGACGCTGGC...GGAGGACAAAGACATGGCTCTGTGACCTTTCCCCTGAACTGCGGATCCGATGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS-3UTR CAA 90 bp | CAGGGGAAAGGTCACAGAGCCATGTCTTTGTCCTCCAGGCATACACGGAAGGATTCCTTGAGGCACTCTTaGGTCTTTCGGAGGCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: QGKGHRAMSLSSRHTRKDSLRHS*VFRRQV Trigger: CACCTGCCTCCGAAAGACCAAAGAGTGCCTCAAGGA...ATCCTTCCGTGTATGCCTGGAGGACAAAGACATGGCTCTGTGACCTTTCCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS-3UTR CAA 90 bp | TCCATCGGATCCGCAGTTCAGGGGAAAGGTCACAGAGCCATGTCTTTGTCCTCCTGTCTTCAAACTTACTaGCCAGCAGGAGGCAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SIGSAVQGKGHRAMSLSSCLQTY*PAGGRR Trigger: TCTCCTGCCTCCTGCTGGCAAGTAAGTTTGAAGACA...GGAGGACAAAGACATGGCTCTGTGACCTTTCCCCTGAACTGCGGATCCGATGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS-3UTR CAA 90 bp | TTCAGGGGAAAGGTCACAGAGCCATGTCTTTGTCCTCCAGGCATACACGGAAGGGTCAGCAGCTCCTTCTaGGTGAGGGAGAAGTTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: FRGKVTEPCLCPPGIHGRVSSSF*VREKFW Trigger: CCAAAACTTCTCCCTCACCAAGAAGGAGCTGCTGAC...CCTTCCGTGTATGCCTGGAGGACAAAGACATGGCTCTGTGACCTTTCCCCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS-3UTR CAA 90 bp | TCCATCGGATCCGCAGTTCAGGGGAAAGGTCACAGAGCCATGTCTTTGTCCTCCGGCTGCTCAGGATCCTaGTATTGTTTATCTGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SIGSAVQGKGHRAMSLSSGCSGS*YCLSAP Trigger: TGGAGCAGATAAACAATACAAGGATCCTGAGCAGCC...GGAGGACAAAGACATGGCTCTGTGACCTTTCCCCTGAACTGCGGATCCGATGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS GCA 90 bp | GTAGGGAGACAGCTGAAGGCAGATCCTGGAGGCCCCAACACAGGCTaGAGCAACCACGGAAGGCTGGAATTTGTAAAATATATGATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VGRQLKADPGGPNTG*SNHGRLEFVKYMIL Trigger: CAAGATCATATATTTTACAAATTCCAGCCTTCCGTGGTTGCTGCAGCCTGTGTTGGGGCCTCCAGGATCTGCCTTCAGCTGTCTCCCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS-3UTR CAA 90 bp | CCAGAGAGATGCTGTTGGGCGTATCCCTGGATGTTTTGTTCTGTTGATTTGTTTTTGGAGGTGGTGATGTaGTACTGGTCCATGAAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PERCCWAYPWMFCSVDLFLEVVM*YWSMKW Trigger: CCACTTCATGGACCAGTACAACATCACCACCTCCAA...AAACAAATCAACAGAACAAAACATCCAGGGATACGCCCAACAGCATCTCTCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS-3UTR CAA 90 bp | GACATAGACAGACGTGTCAGGTGCCCCTTCTTTTTCAGTGGTATGGCTATGAAAACAGTATACAGCTGCTaGGAGGTGGTGATGTTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: DIDRRVRCPFFFSGMAMKTVYSC*EVVMLY Trigger: GTACAACATCACCACCTCCAAGCAGCTGTATACTGT...TTTCATAGCCATACCACTGAAAAAGAAGGGGCACCTGACACGTCTGTCTATGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS GCA 90 bp | GTGAGGGAGAAGTTTTGGCTGCTCAGGATCCTTGTATTGTTTATCTaGTCCAATTTAGGCACGCGGTCTTCCCTGTCTTCAAACTTACTT | + |
|
Preference number: 5 (lower is better) Translates to: VREKFWLLRILVLFI*SNLGTRSSLSSNLL Trigger: AAGTAAGTTTGAAGACAGGGAAGACCGCGTGCCTAAATTGGAGCAGATAAACAATACAAGGATCCTGAGCAGCCAAAACTTCTCCCTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS GCA 72 bp | GGAAGGTGGGCAGCTTCAGTTCCTTCTCGCGCAGAGTaGAGTGTACGTCCGAGGCGACGCGCCCTTCCCACC | + |
|
Preference number: 6 (lower is better) Translates to: GRWAASVPSRAE*SVRPRRRALPT Trigger: GGTGGGAAGGGCGCGTCGCCTCGGACGTACACTGCACTCTGCGCGAGAAGGAACTGAAGCTGCCCACCTTCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS GCA 72 bp | GTGTCTCCTGAGAGCAGGCCCCCTGAACGGTGGGCCTaGAACGAGTCCCGATATGCCAAGCACAAGTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: VSPESRPPERWA*NESRYAKHKSC Trigger: GCAGGACTTGTGCTTGGCATATCGGGACTCGTTGCAGGCCCACCGTTCAGGGGGCCTGCTCTCAGGAGACAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS CAA 90 bp | GGGATGCAGGGACGGGCACAGGACACATATCCAAGGGCTGGAGGGTaGGGTATGGCGTGTGGAGGGATGGACCAGTGTCTCCTGAGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: GMQGRAQDTYPRAGG*GMACGGMDQCLLRA Trigger: TGCTCTCAGGAGACACTGGTCCATCCCTCCACACGCCATACCCAACCCTCCAGCCCTTGGATATGTGTCCTGTGCCCGTCCCTGCATCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS TCA 72 bp | TGGTGGGCCAGGCGTGGCAGTGGTGGTCCTTCTGGCTaGTGGAGGCCAAGAGGTAGTAGTCCAGAAAGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: WWARRGSGGPSG*WRPRGSSPESG Trigger: CCCACTTTCTGGACTACTACCTCTTGGCCTCCATCAGCCAGAAGGACCACCACTGCCACGCCTGGCCCACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS TCA 72 bp | TCTGGAACTGGGCTAGAGTTGTTGGCGGTGGCTGGCTaGGAGTCGGGTAGGTGGGCGGTTGGAACAGCACTT | + |
|
Preference number: 6 (lower is better) Translates to: SGTGLELLAVAG*ESGRWAVGTAL Trigger: AAGTGCTGTTCCAACCGCCCACCTACCCGACTCTCAGCCAGCCACCGCCAACAACTCTAGCCCAGTTCCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS GCA 72 bp | CCAGGTGCCGGGCCGAGGGGCAGAGATGGCAGTGTCTaGTCAGCAGGGTCAGAATGTCTACAAAGAATCGAC | + |
|
Preference number: 6 (lower is better) Translates to: PGAGPRGRDGSV*SAGSECLQRID Trigger: GTCGATTCTTTGTAGACATTCTGACCCTGCTGAGCAGACACTGCCATCTCTGCCCCTCGGCCCGGCACCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
||
| CDS GCA 72 bp | TCCGTAGGAGGCCGTAAGGCAGTGCCTGGGTTCAGCTaGTATGGCCATCTGCATGCTAAGGGATGCAGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: SVGGRKAVPGFS*YGHLHAKGCRD Trigger: GTCCCTGCATCCCTTAGCATGCAGATGGCCATAGCAGCTGAACCCAGGCACTGCCTTACGGCCTCCTACGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS CCA 72 bp | GGAGCTGATGATGAGCCCGGCACCATGGCCAGCGTCTaGCTCTTGACTGCAACGGCATCCTTGAGGACATTG | + |
|
Preference number: 6 (lower is better) Translates to: GADDEPGTMASV*LLTATASLRTL Trigger: CAATGTCCTCAAGGATGCCGTTGCAGTCAAGAGCCAGACGCTGGCCATGGTGCCGGGCTCATCATCAGCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
||
| CDS CCA 72 bp | TCCCGATATGCCAAGCACAAGTCCTGCGCTGGACTCTaGAACTGGGCTAGAGTTGTTGGCGGTGGCTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SRYAKHKSCAGL*NWARVVGGGWL Trigger: CAGCCAGCCACCGCCAACAACTCTAGCCCAGTTCCAGAGTCCAGCGCAGGACTTGTGCTTGGCATATCGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
||
| CDS GCA 72 bp | GCCTGCAACGAGTCCCGATATGCCAAGCACAAGTCCTaGGCTGGACTCTGGAACTGGGCTAGAGTTGTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: ACNESRYAKHKS*AGLWNWARVVG Trigger: GCCAACAACTCTAGCCCAGTTCCAGAGTCCAGCGCAGGACTTGTGCTTGGCATATCGGGACTCGTTGCAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
||
| CDS CCA 72 bp | TCTACAAAGAATCGACGGCTCTTCAGGAGCGGGGAGTaGGCACGGAAGGTGGGCAGCTTCAGTTCCTTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: STKNRRLFRSGE*ARKVGSFSSFS Trigger: CGAGAAGGAACTGAAGCTGCCCACCTTCCGTGCCCACTCCCCGCTCCTGAAGAGCCGTCGATTCTTTGTAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
||
| CDS CCA 72 bp | TATGCCAAGCACAAGTCCTGCGCTGGACTCTGGAACTaGGCTAGAGTTGTTGGCGGTGGCTGGCTGAGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: YAKHKSCAGLWN*ARVVGGGWLRV Trigger: GACTCTCAGCCAGCCACCGCCAACAACTCTAGCCCAGTTCCAGAGTCCAGCGCAGGACTTGTGCTTGGCATA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
||
| CDS GCA 72 bp | GCCAGCAGGAGGCAGGAGACAGCCACAGTATACAGCTaGTTGGAGGTGGTGATGTTGTACTGGTCCATGAAG | + |
|
Preference number: 6 (lower is better) Translates to: ASRRQETATVYS*LEVVMLYWSMK Trigger: CTTCATGGACCAGTACAACATCACCACCTCCAAGCAGCTGTATACTGTGGCTGTCTCCTGCCTCCTGCTGGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
||
| CDS CAA 90 bp | TTACTTGCCAGCAGGAGGCAGGAGACAGCCACAGTATACAGCTGCTaGGAGGTGGTGATGTTGTACTGGTCCATGAAGTGGTCCAGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: LLASRRQETATVYSC*EVVMLYWSMKWSRR Trigger: CCTTCTGGACCACTTCATGGACCAGTACAACATCACCACCTCCAAGCAGCTGTATACTGTGGCTGTCTCCTGCCTCCTGCTGGCAAGTAA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS TCA 72 bp | TGTCATAGGCTACCAGCAGGATTTCGATACACGTGCTaGGATGCTCTAGGGAGTAGCTCGAGACCCTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: CHRLPAGFRYTC*DALGSSSRPSA Trigger: TGCAGAGGGTCTCGAGCTACTCCCTAGAGCATCTCAGCACGTGTATCGAAATCCTGCTGGTAGCCTATGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS GCA 72 bp | CAGCTGAAGGCAGATCCTGGAGGCCCCAACACAGGCTaGAGCAACCACGGAAGGCTGGAATTTGTAAAATAT | + |
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Preference number: 6 (lower is better) Translates to: QLKADPGGPNTG*SNHGRLEFVKY Trigger: ATATTTTACAAATTCCAGCCTTCCGTGGTTGCTGCAGCCTGTGTTGGGGCCTCCAGGATCTGCCTTCAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS CAA 72 bp | GTGAGGGAGAAGTTTTGGCTGCTCAGGATCCTTGTATaGTTTATCTGCTCCAATTTAGGCACGCGGTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: VREKFWLLRILV*FICSNLGTRSS Trigger: GGAAGACCGCGTGCCTAAATTGGAGCAGATAAACAATACAAGGATCCTGAGCAGCCAAAACTTCTCCCTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS CAA 90 bp | TCCTTCTTGGTGAGGGAGAAGTTTTGGCTGCTCAGGATCCTTGTATaGTTTATCTGCTCCAATTTAGGCACGCGGTCTTCCCTGTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: SFLVREKFWLLRILV*FICSNLGTRSSLSS Trigger: TGAAGACAGGGAAGACCGCGTGCCTAAATTGGAGCAGATAAACAATACAAGGATCCTGAGCAGCCAAAACTTCTCCCTCACCAAGAAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS CAA 90 bp | CAGAAGTTCTGTGGTCAGCAGCTCCTTCTTGGTGAGGGAGAAGTTTaGGCTGCTCAGGATCCTTGTATTGTTTATCTGCTCCAATTTAGG | + |
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Preference number: 6 (lower is better) Translates to: QKFCGQQLLLGEGEV*AAQDPCIVYLLQFR Trigger: CCTAAATTGGAGCAGATAAACAATACAAGGATCCTGAGCAGCCAAAACTTCTCCCTCACCAAGAAGGAGCTGCTGACCACAGAACTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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| CDS GCA 72 bp | AAGTTTTGGCTGCTCAGGATCCTTGTATTGTTTATCTaGTCCAATTTAGGCACGCGGTCTTCCCTGTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: KFWLLRILVLFI*SNLGTRSSLSS Trigger: TGAAGACAGGGAAGACCGCGTGCCTAAATTGGAGCAGATAAACAATACAAGGATCCTGAGCAGCCAAAACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050574.7 |
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