Pregenerated sensors for CCNJ (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025010Ensembl transcript IDs: ENSMUST00000025983.13, ENSMUST00000119316.2
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCAGCCTGTCCGTGCACGAACACAGGACCCACTGCATTCGTCCTGTaGCGTGATCGATTCTCATCCCAGCAGGAGCACTGCAGCCGATGT | + |
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Preference number: 1 (lower is better) Translates to: PACPCTNTGPTAFVL*RDRFSSQQEHCSRC Trigger: ACATCGGCTGCAGTGCTCCTGCTGGGATGAGAATCGATCACGGCACAGGACGAATGCAGTGGGTCCTGTGTTCGTGCACGGACAGGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
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| 3UTR TCA 90 bp | CTGTCCGTGCACGAACACAGGACCCACTGCATTCGTCCTGTGCCGTaGTCGATTCTCATCCCAGCAGGAGCACTGCAGCCGATGTTGCAC | + |
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Preference number: 1 (lower is better) Translates to: LSVHEHRTHCIRPVP*SILIPAGALQPMLH Trigger: GTGCAACATCGGCTGCAGTGCTCCTGCTGGGATGAGAATCGATCACGGCACAGGACGAATGCAGTGGGTCCTGTGTTCGTGCACGGACAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
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| 3UTR GCA 90 bp | GCTGTGGAGCCCTTCCGTCCCTTCCCAGCAAAGGCCACCGACTCCTaGTGCATACCCACATCTTTACAGCGAGCTCTCGCCAATAGACAC | + |
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Preference number: 1 (lower is better) Translates to: AVEPFRPFPAKATDS*CIPTSLQRALANRH Trigger: GTGTCTATTGGCGAGAGCTCGCTGTAAAGATGTGGGTATGCAGCAGGAGTCGGTGGCCTTTGCTGGGAAGGGACGGAAGGGCTCCACAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
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| 3UTR GCA 90 bp | GTGGAGCCCTTCCGTCCCTTCCCAGCAAAGGCCACCGACTCCTGCTaGATACCCACATCTTTACAGCGAGCTCTCGCCAATAGACACTGT | + |
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Preference number: 1 (lower is better) Translates to: VEPFRPFPAKATDSC*IPTSLQRALANRHC Trigger: ACAGTGTCTATTGGCGAGAGCTCGCTGTAAAGATGTGGGTATGCAGCAGGAGTCGGTGGCCTTTGCTGGGAAGGGACGGAAGGGCTCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
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| 3UTR GCA 90 bp | GCATTCGTCCTGTGCCGTGATCGATTCTCATCCCAGCAGGAGCACTaGAGCCGATGTTGCACGGGTAGCTCATATTCTAATACTCCCAAG | + |
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Preference number: 1 (lower is better) Translates to: AFVLCRDRFSSQQEH*SRCCTGSSYSNTPK Trigger: CTTGGGAGTATTAGAATATGAGCTACCCGTGCAACATCGGCTGCAGTGCTCCTGCTGGGATGAGAATCGATCACGGCACAGGACGAATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
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| 3UTR GCA 90 bp | TGCCGTGATCGATTCTCATCCCAGCAGGAGCACTGCAGCCGATGTTaGACGGGTAGCTCATATTCTAATACTCCCAAGGCATGTCGGTTA | + |
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Preference number: 1 (lower is better) Translates to: CRDRFSSQQEHCSRC*TGSSYSNTPKACRL Trigger: TAACCGACATGCCTTGGGAGTATTAGAATATGAGCTACCCGTGCAACATCGGCTGCAGTGCTCCTGCTGGGATGAGAATCGATCACGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
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| 3UTR TCA 90 bp | GATAAGACTACTATGCTTACAGTTCATCAGCCATCTTTTTACTTCTaGAGTCTGTCCTCCATACTTCCTGACAGTATTTTATGGCCAGGT | + |
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Preference number: 1 (lower is better) Translates to: DKTTMLTVHQPSFYF*SLSSILPDSILWPG Trigger: ACCTGGCCATAAAATACTGTCAGGAAGTATGGAGGACAGACTTCAGAAGTAAAAAGATGGCTGATGAACTGTAAGCATAGTAGTCTTATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
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| 3UTR-3UTR CCA 90 bp | CACATTTCCGGAAGAACTCCTGTTGGCAGAAGCTGCCCACGGGCACTTCTCCTCGCAACAGCCAATCACTaGGTGATGCCCAGCCTGTCC | + |
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Preference number: 2 (lower is better) Translates to: HISGRTPVGRSCPRALLLATANH*VMPSLS Trigger: GGACAGGCTGGGCATCACCCAGTGATTGGCTGTTGC...GAGGAGAAGTGCCCGTGGGCAGCTTCTGCCAACAGGAGTTCTTCCGGAAATGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
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| 3UTR-3UTR CCA 90 bp | CCGGAAGAACTCCTGTTGGCAGAAGCTGCCCACGGGCACTTCTCCTCCGGAGCTGCCAACCACAGAAAGTaGCTACTAAGATCAGCACTC | + |
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Preference number: 2 (lower is better) Translates to: PEELLLAEAAHGHFSSGAANHRK*LLRSAL Trigger: GAGTGCTGATCTTAGTAGCCACTTTCTGTGGTTGGC...AGCTCCGGAGGAGAAGTGCCCGTGGGCAGCTTCTGCCAACAGGAGTTCTTCCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
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| 3UTR-3UTR TCA 90 bp | GTCTGTCCTCCATACTTCCTGACAGTATTTTATGGCCAGGTTGCCCCGGGTATGGCACTCCTGCTTGCCTaGCTTGCTGGATCCCAAGGG | + |
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Preference number: 2 (lower is better) Translates to: VCPPYFLTVFYGQVAPGMALLLA*LAGSQG Trigger: CCCTTGGGATCCAGCAAGTCAGGCAAGCAGGAGTGC...CATACCCGGGGCAACCTGGCCATAAAATACTGTCAGGAAGTATGGAGGACAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
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| 3UTR-3UTR GCA 90 bp | CACATTTCCGGAAGAACTCCTGTTGGCAGAAGCTGCCCACGGGCACTTCTCCTCGCCACCGACTCCTGCTaGATACCCACATCTTTACAG | + |
|
Preference number: 2 (lower is better) Translates to: HISGRTPVGRSCPRALLLATDSC*IPTSLQ Trigger: CTGTAAAGATGTGGGTATGCAGCAGGAGTCGGTGGC...GAGGAGAAGTGCCCGTGGGCAGCTTCTGCCAACAGGAGTTCTTCCGGAAATGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
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| 3UTR-3UTR CCA 90 bp | CCGGAAGAACTCCTGTTGGCAGAAGCTGCCCACGGGCACTTCTCCTCCGGAGCTCTCCTTCCTCCTGCATaGATAAGACTACTATGCTTA | + |
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Preference number: 2 (lower is better) Translates to: PEELLLAEAAHGHFSSGALLPPA*IRLLCL Trigger: TAAGCATAGTAGTCTTATCCATGCAGGAGGAAGGAG...AGCTCCGGAGGAGAAGTGCCCGTGGGCAGCTTCTGCCAACAGGAGTTCTTCCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
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| 3UTR-3UTR TCA 90 bp | GCATTCGTCCTGTGCCGTGATCGATTCTCATCCCAGCAGGAGCACTGCAGCCGACTCGGCCCGTTGCATTaGTGTACTGATTGTATTCTT | + |
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Preference number: 2 (lower is better) Translates to: AFVLCRDRFSSQQEHCSRLGPLH*CTDCIL Trigger: AAGAATACAATCAGTACATCAATGCAACGGGCCGAG...TCGGCTGCAGTGCTCCTGCTGGGATGAGAATCGATCACGGCACAGGACGAATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
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| 3UTR-3UTR TCA 90 bp | TGTCAGTCCATCAGGCTGTGGAGCCCTTCCGTCCCTTCCCAGCAAAGGCCACCGCCATCTTTTTACTTCTaGAGTCTGTCCTCCATACTT | + |
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Preference number: 2 (lower is better) Translates to: CQSIRLWSPSVPSQQRPPPSFYF*SLSSIL Trigger: AAGTATGGAGGACAGACTTCAGAAGTAAAAAGATGG...CGGTGGCCTTTGCTGGGAAGGGACGGAAGGGCTCCACAGCCTGATGGACTGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
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| 3UTR-3UTR GCA 90 bp | TGCCTGACTTGCTGGATCCCAAGGGCACTCACTGAACCACCCTCCCATAACAAAGGAAGACAAAAGGCTTaGTCCAGAGCTAACCACCTC | + |
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Preference number: 2 (lower is better) Translates to: CLTCWIPRALTEPPSHNKGRQKA*SRANHL Trigger: GAGGTGGTTAGCTCTGGAGCAAGCCTTTTGTCTTCC...TTTGTTATGGGAGGGTGGTTCAGTGAGTGCCCTTGGGATCCAGCAAGTCAGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
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| 3UTR-3UTR CCA 90 bp | GAGCTCTCGCCAATAGACACTGTGTCTCATAGCTGCCACAGTTTCCCTTCTATTGCAACAGCCAATCACTaGGTGATGCCCAGCCTGTCC | + |
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Preference number: 2 (lower is better) Translates to: ELSPIDTVSHSCHSFPSIATANH*VMPSLS Trigger: GGACAGGCTGGGCATCACCCAGTGATTGGCTGTTGC...AATAGAAGGGAAACTGTGGCAGCTATGAGACACAGTGTCTATTGGCGAGAGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
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| 3UTR-3UTR TCA 90 bp | CACATTTCCGGAAGAACTCCTGTTGGCAGAAGCTGCCCACGGGCACTTCTCCTCTGTATTCTTTCCTTCTaGAGAGGAAGACAAAAGGCT | + |
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Preference number: 2 (lower is better) Translates to: HISGRTPVGRSCPRALLLCILSF*RGRQKA Trigger: AGCCTTTTGTCTTCCTCTTCAGAAGGAAAGAATACA...GAGGAGAAGTGCCCGTGGGCAGCTTCTGCCAACAGGAGTTCTTCCGGAAATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
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| 3UTR-3UTR TCA 90 bp | GCATTCGTCCTGTGCCGTGATCGATTCTCATCCCAGCAGGAGCACTGCAGCCGAGTTGCATTGATGTACTaGTTGTATTCTTTCCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: AFVLCRDRFSSQQEHCSRVALMY*LYSFLL Trigger: CAGAAGGAAAGAATACAATCAGTACATCAATGCAAC...TCGGCTGCAGTGCTCCTGCTGGGATGAGAATCGATCACGGCACAGGACGAATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGGTTTTCATCACCAGGCCTTCTGTACGCTAAATATAAAAGTTAGCTTCCTTCGGAAGAACTCCTGTTaGCAGAAGCTGCCCACGGGC | + |
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Preference number: 2 (lower is better) Translates to: SGFHHQAFCTLNIKVSFLRKNSC*QKLPTG Trigger: GCCCGTGGGCAGCTTCTGCCAACAGGAGTTCTTCCG...AAGGAAGCTAACTTTTATATTTAGCGTACAGAAGGCCTGGTGATGAAAACCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
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| 3UTR-3UTR TCA 90 bp | GCTTACAGTTCATCAGCCATCTTTTTACTTCTGAAGTCTGTCCTCCATACTTCCCTGAAGAACTGGGGCTaGTCACTTAGTGGGAAAAGG | + |
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Preference number: 2 (lower is better) Translates to: AYSSSAIFLLLKSVLHTSLKNWG*SLSGKR Trigger: CCTTTTCCCACTAAGTGATCAGCCCCAGTTCTTCAG...GGAAGTATGGAGGACAGACTTCAGAAGTAAAAAGATGGCTGATGAACTGTAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
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| 3UTR-3UTR GCA 90 bp | ATGACTATTACTGCTGCTTTCACTCACTATCAATACAAAGACTTGTCTCCCGGCGGAAGACAAAAGGCTTaGTCCAGAGCTAACCACCTC | + |
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Preference number: 2 (lower is better) Translates to: MTITAAFTHYQYKDLSPGGRQKA*SRANHL Trigger: GAGGTGGTTAGCTCTGGAGCAAGCCTTTTGTCTTCC...GCCGGGAGACAAGTCTTTGTATTGATAGTGAGTGAAAGCAGCAGTAATAGTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
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| 3UTR-3UTR GCA 90 bp | ATGACTATTACTGCTGCTTTCACTCACTATCAATACAAAGACTTGTCTCCCGGCCCTTCTCCTGAAAACTaGCTTCAGGAGCAACAGCCA | + |
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Preference number: 2 (lower is better) Translates to: MTITAAFTHYQYKDLSPGPSPEN*LQEQQP Trigger: TGGCTGTTGCTCCTGAAGGCAGTTTTCAGGAGAAGG...GCCGGGAGACAAGTCTTTGTATTGATAGTGAGTGAAAGCAGCAGTAATAGTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
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| 3UTR-3UTR GCA 90 bp | GCTTACAGTTCATCAGCCATCTTTTTACTTCTGAAGTCTGTCCTCCATACTTCCCCTTCTCCTGAAAACTaGCTTCAGGAGCAACAGCCA | + |
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Preference number: 2 (lower is better) Translates to: AYSSSAIFLLLKSVLHTSPSPEN*LQEQQP Trigger: TGGCTGTTGCTCCTGAAGGCAGTTTTCAGGAGAAGG...GGAAGTATGGAGGACAGACTTCAGAAGTAAAAAGATGGCTGATGAACTGTAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
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| 3UTR-3UTR CCA 90 bp | ATGACTATTACTGCTGCTTTCACTCACTATCAATACAAAGACTTGTCTCCCGGCGCCAACCACAGAAAGTaGCTACTAAGATCAGCACTC | + |
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Preference number: 2 (lower is better) Translates to: MTITAAFTHYQYKDLSPGANHRK*LLRSAL Trigger: GAGTGCTGATCTTAGTAGCCACTTTCTGTGGTTGGC...GCCGGGAGACAAGTCTTTGTATTGATAGTGAGTGAAAGCAGCAGTAATAGTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
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| 3UTR-3UTR TCA 90 bp | AGTGGTTTTCATCACCAGGCCTTCTGTACGCTAAATATAAAAGTTAGCTTCCTTCTGAAGAACTGGGGCTaGTCACTTAGTGGGAAAAGG | + |
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Preference number: 2 (lower is better) Translates to: SGFHHQAFCTLNIKVSFLLKNWG*SLSGKR Trigger: CCTTTTCCCACTAAGTGATCAGCCCCAGTTCTTCAG...AAGGAAGCTAACTTTTATATTTAGCGTACAGAAGGCCTGGTGATGAAAACCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
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| 3UTR-3UTR GCA 90 bp | TACCTGAGTGGTTTTCATCACCAGGCCTTCTGTACGCTAAATATAAAAGTTAGCCCAGCTCCTTCCTCCTaGATGGATAAGACTACTATG | + |
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Preference number: 2 (lower is better) Translates to: YLSGFHHQAFCTLNIKVSPAPSS*MDKTTM Trigger: CATAGTAGTCTTATCCATGCAGGAGGAAGGAGCTGG...GCTAACTTTTATATTTAGCGTACAGAAGGCCTGGTGATGAAAACCACTCAGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
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| 3UTR-3UTR GCA 90 bp | AGTGGTTTTCATCACCAGGCCTTCTGTACGCTAAATATAAAAGTTAGCTTCCTTCCAGCTCCTTCCTCCTaGATGGATAAGACTACTATG | + |
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Preference number: 2 (lower is better) Translates to: SGFHHQAFCTLNIKVSFLPAPSS*MDKTTM Trigger: CATAGTAGTCTTATCCATGCAGGAGGAAGGAGCTGG...AAGGAAGCTAACTTTTATATTTAGCGTACAGAAGGCCTGGTGATGAAAACCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
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| 3UTR-3UTR TCA 90 bp | TATGACTATTACTGCTGCTTTCACTCACTATCAATACAAAGACTTGTCTCCCGGTGTATTCTTTCCTTCTaGAGAGGAAGACAAAAGGCT | + |
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Preference number: 2 (lower is better) Translates to: YDYYCCFHSLSIQRLVSRCILSF*RGRQKA Trigger: AGCCTTTTGTCTTCCTCTTCAGAAGGAAAGAATACA...CCGGGAGACAAGTCTTTGTATTGATAGTGAGTGAAAGCAGCAGTAATAGTCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
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| 3UTR-3UTR GCA 90 bp | AGTGGTTTTCATCACCAGGCCTTCTGTACGCTAAATATAAAAGTTAGCTTCCTTGGGTATGACTATTACTaGTGCTTTCACTCACTATCA | + |
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Preference number: 2 (lower is better) Translates to: SGFHHQAFCTLNIKVSFLGYDYY*CFHSLS Trigger: TGATAGTGAGTGAAAGCAGCAGTAATAGTCATACCC...AAGGAAGCTAACTTTTATATTTAGCGTACAGAAGGCCTGGTGATGAAAACCACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
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| 3UTR-3UTR TCA 90 bp | AGTGGTTTTCATCACCAGGCCTTCTGTACGCTAAATATAAAAGTTAGCTTCCTTGTTGCATTGATGTACTaGTTGTATTCTTTCCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: SGFHHQAFCTLNIKVSFLVALMY*LYSFLL Trigger: CAGAAGGAAAGAATACAATCAGTACATCAATGCAAC...AAGGAAGCTAACTTTTATATTTAGCGTACAGAAGGCCTGGTGATGAAAACCACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
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| 3UTR GCA 72 bp | GGCAGAAGCTGCCCACGGGCACTTCTCCTCCGGAGCTaGCTGTCAGTCCATCAGGCTGTGGAGCCCTTCCGT | + |
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Preference number: 3 (lower is better) Translates to: GRSCPRALLLRS*LSVHQAVEPFR Trigger: ACGGAAGGGCTCCACAGCCTGATGGACTGACAGGCAGCTCCGGAGGAGAAGTGCCCGTGGGCAGCTTCTGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
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| 3UTR CCA 72 bp | TTCTCCTCCGGAGCTGCCTGTCAGTCCATCAGGCTGTaGAGCCCTTCCGTCCCTTCCCAGCAAAGGCCACCG | + |
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Preference number: 3 (lower is better) Translates to: FSSGAACQSIRL*SPSVPSQQRPP Trigger: CGGTGGCCTTTGCTGGGAAGGGACGGAAGGGCTCCACAGCCTGATGGACTGACAGGCAGCTCCGGAGGAGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
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| 3UTR GCA 72 bp | CCCTTCCGTCCCTTCCCAGCAAAGGCCACCGACTCCTaGTGCATACCCACATCTTTACAGCGAGCTCTCGCC | + |
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Preference number: 3 (lower is better) Translates to: PFRPFPAKATDS*CIPTSLQRALA Trigger: GGCGAGAGCTCGCTGTAAAGATGTGGGTATGCAGCAGGAGTCGGTGGCCTTTGCTGGGAAGGGACGGAAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
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| 3UTR TCA 72 bp | CACGAACACAGGACCCACTGCATTCGTCCTGTGCCGTaGTCGATTCTCATCCCAGCAGGAGCACTGCAGCCG | + |
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Preference number: 3 (lower is better) Translates to: HEHRTHCIRPVP*SILIPAGALQP Trigger: CGGCTGCAGTGCTCCTGCTGGGATGAGAATCGATCACGGCACAGGACGAATGCAGTGGGTCCTGTGTTCGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
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| 3UTR TCA 72 bp | GAAAACTGCCTTCAGGAGCAACAGCCAATCACTGGGTaGTGCCCAGCCTGTCCGTGCACGAACACAGGACCC | + |
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Preference number: 3 (lower is better) Translates to: ENCLQEQQPITG*CPACPCTNTGP Trigger: GGGTCCTGTGTTCGTGCACGGACAGGCTGGGCATCACCCAGTGATTGGCTGTTGCTCCTGAAGGCAGTTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
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| 3UTR GCA 72 bp | TTCCGTCCCTTCCCAGCAAAGGCCACCGACTCCTGCTaGATACCCACATCTTTACAGCGAGCTCTCGCCAAT | + |
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Preference number: 3 (lower is better) Translates to: FRPFPAKATDSC*IPTSLQRALAN Trigger: ATTGGCGAGAGCTCGCTGTAAAGATGTGGGTATGCAGCAGGAGTCGGTGGCCTTTGCTGGGAAGGGACGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
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| 3UTR CCA 72 bp | GCTACTAAGATCAGCACTCCTGCTTGCCTGACTTGCTaGATCCCAAGGGCACTCACTGAACCACCCTCCCAT | + |
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Preference number: 3 (lower is better) Translates to: ATKISTPACLTC*IPRALTEPPSH Trigger: ATGGGAGGGTGGTTCAGTGAGTGCCCTTGGGATCCAGCAAGTCAGGCAAGCAGGAGTGCTGATCTTAGTAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
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| 3UTR CCA 72 bp | CTTTTAAGGAAAGCACATTTCCGGAAGAACTCCTGTTaGCAGAAGCTGCCCACGGGCACTTCTCCTCCGGAG | + |
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Preference number: 3 (lower is better) Translates to: LLRKAHFRKNSC*QKLPTGTSPPE Trigger: CTCCGGAGGAGAAGTGCCCGTGGGCAGCTTCTGCCAACAGGAGTTCTTCCGGAAATGTGCTTTCCTTAAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
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| 3UTR GCA 72 bp | CGATTCTCATCCCAGCAGGAGCACTGCAGCCGATGTTaGACGGGTAGCTCATATTCTAATACTCCCAAGGCA | + |
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Preference number: 3 (lower is better) Translates to: RFSSQQEHCSRC*TGSSYSNTPKA Trigger: TGCCTTGGGAGTATTAGAATATGAGCTACCCGTGCAACATCGGCTGCAGTGCTCCTGCTGGGATGAGAATCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
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| 3UTR GCA 72 bp | CTGTGCCGTGATCGATTCTCATCCCAGCAGGAGCACTaGAGCCGATGTTGCACGGGTAGCTCATATTCTAAT | + |
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Preference number: 3 (lower is better) Translates to: LCRDRFSSQQEH*SRCCTGSSYSN Trigger: ATTAGAATATGAGCTACCCGTGCAACATCGGCTGCAGTGCTCCTGCTGGGATGAGAATCGATCACGGCACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
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| 3UTR GCA 72 bp | CCACAGAAAGTGGCTACTAAGATCAGCACTCCTGCTTaGCTGACTTGCTGGATCCCAAGGGCACTCACTGAA | + |
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Preference number: 3 (lower is better) Translates to: PQKVATKISTPA*LTCWIPRALTE Trigger: TTCAGTGAGTGCCCTTGGGATCCAGCAAGTCAGGCAAGCAGGAGTGCTGATCTTAGTAGCCACTTTCTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
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| 3UTR-3UTR CAA 90 bp | CACATTTCCGGAAGAACTCCTGTTGGCAGAAGCTGCCCACGGGCACTTCTCCTCTATCAATACAAAGACTaGTCTCCCGGCAGGTACACA | + |
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Preference number: 3 (lower is better) Translates to: HISGRTPVGRSCPRALLLYQYKD*SPGRYT Trigger: TGTGTACCTGCCGGGAGACAAGTCTTTGTATTGATA...GAGGAGAAGTGCCCGTGGGCAGCTTCTGCCAACAGGAGTTCTTCCGGAAATGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
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| 3UTR TCA 72 bp | CAGTCAGGAACTGGGACATTTCTGTCACACAGGATTTaGCACGTCAGTACCTGCAGAGCCCTCCTAAGCACT | + |
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Preference number: 3 (lower is better) Translates to: QSGTGTFLSHRI*HVSTCRALLST Trigger: AGTGCTTAGGAGGGCTCTGCAGGTACTGACGTGTCAAATCCTGTGTGACAGAAATGTCCCAGTTCCTGACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
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| 3UTR-3UTR CAA 90 bp | GCTTACAGTTCATCAGCCATCTTTTTACTTCTGAAGTCTGTCCTCCATACTTCCGATCAGCACTCCTGCTaGCCTGACTTGCTGGATCCC | + |
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Preference number: 3 (lower is better) Translates to: AYSSSAIFLLLKSVLHTSDQHSC*PDLLDP Trigger: GGGATCCAGCAAGTCAGGCAAGCAGGAGTGCTGATC...GGAAGTATGGAGGACAGACTTCAGAAGTAAAAAGATGGCTGATGAACTGTAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
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| 3UTR-3UTR CAA 90 bp | GTCTGTCCTCCATACTTCCTGACAGTATTTTATGGCCAGGTTGCCCCGGGTATGTATCAATACAAAGACTaGTCTCCCGGCAGGTACACA | + |
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Preference number: 3 (lower is better) Translates to: VCPPYFLTVFYGQVAPGMYQYKD*SPGRYT Trigger: TGTGTACCTGCCGGGAGACAAGTCTTTGTATTGATA...CATACCCGGGGCAACCTGGCCATAAAATACTGTCAGGAAGTATGGAGGACAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
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| 3UTR-3UTR CAA 90 bp | GATTCTCATCCCAGCAGGAGCACTGCAGCCGATGTTGCACGGGTAGCTCATATTGCTGTATTGAGCATCTaGAAATATTTGGACCATCAG | + |
|
Preference number: 3 (lower is better) Translates to: DSHPSRSTAADVARVAHIAVLSI*KYLDHQ Trigger: CTGATGGTCCAAATATTTCAAGATGCTCAATACAGC...AATATGAGCTACCCGTGCAACATCGGCTGCAGTGCTCCTGCTGGGATGAGAATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
||
| 3UTR TCA 72 bp | CTCAACACTGGACTCCATGCTGCAGGCCTCTATCTGTaGACGGGAAAGAGACATTATCTTTTGAACCCACTT | + |
|
Preference number: 3 (lower is better) Translates to: LNTGLHAAGLYL*TGKRHYLLNPL Trigger: AAGTGGGTTCAAAAGATAATGTCTCTTTCCCGTTCACAGATAGAGGCCTGCAGCATGGAGTCCAGTGTTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
||
| 3UTR GCA 72 bp | TCCTCCATACTTCCTGACAGTATTTTATGGCCAGGTTaGCCCGGGTATGACTATTACTGCTGCTTTCACTCA | + |
|
Preference number: 3 (lower is better) Translates to: SSILPDSILWPG*PGYDYYCCFHS Trigger: TGAGTGAAAGCAGCAGTAATAGTCATACCCGGGGCAACCTGGCCATAAAATACTGTCAGGAAGTATGGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
||
| 3UTR TCA 72 bp | AGTCTTCCGGTGCCTCGGCCCGTTGCATTGATGTACTaGTTGTATTCTTTCCTTCTGAAGAGGAAGACAAAA | + |
|
Preference number: 3 (lower is better) Translates to: SLPVPRPVALMY*LYSFLLKRKTK Trigger: TTTTGTCTTCCTCTTCAGAAGGAAAGAATACAATCAGTACATCAATGCAACGGGCCGAGGCACCGGAAGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
||
| 3UTR GCA 72 bp | TTATGGCCAGGTTGCCCCGGGTATGACTATTACTGCTaGTTTCACTCACTATCAATACAAAGACTTGTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: LWPGCPGYDYYC*FHSLSIQRLVS Trigger: GGAGACAAGTCTTTGTATTGATAGTGAGTGAAAGCAGCAGTAATAGTCATACCCGGGGCAACCTGGCCATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGCTCTCGCCAATAGACACTGTGTCTCATAGCTGCCACAGTTTCCCTTCTATTAGCATCTTGAAATATTaGGACCATCAGTCAGGAACT | + |
|
Preference number: 3 (lower is better) Translates to: ELSPIDTVSHSCHSFPSISILKY*DHQSGT Trigger: AGTTCCTGACTGATGGTCCAAATATTTCAAGATGCT...AATAGAAGGGAAACTGTGGCAGCTATGAGACACAGTGTCTATTGGCGAGAGCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
||
| 3UTR GCA 72 bp | CACCAGCTCCTTCCTCCTGCATGGATAAGACTACTATaGTTACAGTTCATCAGCCATCTTTTTACTTCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: HQLLPPAWIRLL*LQFISHLFTSE Trigger: TTCAGAAGTAAAAAGATGGCTGATGAACTGTAAGCATAGTAGTCTTATCCATGCAGGAGGAAGGAGCTGGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGACTATTACTGCTGCTTTCACTCACTATCAATACAAAGACTTGTCTCCCGGCAGCATCTTGAAATATTaGGACCATCAGTCAGGAACT | + |
|
Preference number: 3 (lower is better) Translates to: MTITAAFTHYQYKDLSPGSILKY*DHQSGT Trigger: AGTTCCTGACTGATGGTCCAAATATTTCAAGATGCT...GCCGGGAGACAAGTCTTTGTATTGATAGTGAGTGAAAGCAGCAGTAATAGTCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTTACAGTTCATCAGCCATCTTTTTACTTCTGAAGTCTGTCCTCCATACTTCCGCTGTATTGAGCATCTaGAAATATTTGGACCATCAG | + |
|
Preference number: 3 (lower is better) Translates to: AYSSSAIFLLLKSVLHTSAVLSI*KYLDHQ Trigger: CTGATGGTCCAAATATTTCAAGATGCTCAATACAGC...GGAAGTATGGAGGACAGACTTCAGAAGTAAAAAGATGGCTGATGAACTGTAAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
||
| 3UTR TCA 72 bp | GTCATAGCACAGATATTTGGTTTGCGTTTTTGTACTTaGATAGTGTTTATTAGTGGACTCTGGTTAAGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: VIAQIFGLRFCT*IVFISGLWLSP Trigger: AGGACTTAACCAGAGTCCACTAATAAACACTATTCAAGTACAAAAACGCAAACCAAATATCTGTGCTATGAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025983.13 |
||
| CDS-3UTR GCA 90 bp | CCGGAAGAACTCCTGTTGGCAGAAGCTGCCCACGGGCACTTCTCCTCCGGAGCTACCGGCCGGGAGGGCTaGGCTGTCTGGAACACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PEELLLAEAAHGHFSSGATGREG*AVWNTV Trigger: GACTGTGTTCCAGACAGCGCAGCCCTCCCGGCCGGT...AGCTCCGGAGGAGAAGTGCCCGTGGGCAGCTTCTGCCAACAGGAGTTCTTCCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
||
| CDS-3UTR TCA 90 bp | CCGGAAGAACTCCTGTTGGCAGAAGCTGCCCACGGGCACTTCTCCTCCGGAGCTCCCAGGAGTAGGCAGTaGGACGGTGCAGTCTCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PEELLLAEAAHGHFSSGAPRSRQ*DGAVSW Trigger: CCACGAGACTGCACCGTCTCACTGCCTACTCCTGGG...AGCTCCGGAGGAGAAGTGCCCGTGGGCAGCTTCTGCCAACAGGAGTTCTTCCGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
||
| CDS-3UTR TCA 90 bp | TGCTGGATCCCAAGGGCACTCACTGAACCACCCTCCCATAACAAAGTGCTGCGTCCCAGGAGTAGGCAGTaGGACGGTGCAGTCTCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CWIPRALTEPPSHNKVLRPRSRQ*DGAVSW Trigger: CCACGAGACTGCACCGTCTCACTGCCTACTCCTGGG...ACGCAGCACTTTGTTATGGGAGGGTGGTTCAGTGAGTGCCCTTGGGATCCAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
||
| CDS-3UTR CCA 90 bp | GTGATCGATTCTCATCCCAGCAGGAGCACTGCAGCCGATGTTGCACGGGTAGCTGTCAGCTGTGTCGACTaGGGAGCTGACTGTCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VIDSHPSRSTAADVARVAVSCVD*GADCPL Trigger: GAGGGGACAGTCAGCTCCCCAGTCGACACAGCTGAC...AGCTACCCGTGCAACATCGGCTGCAGTGCTCCTGCTGGGATGAGAATCGATCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
||
| CDS-3UTR TCA 90 bp | GATTCTCATCCCAGCAGGAGCACTGCAGCCGATGTTGCACGGGTAGCTCATATTATCGGCCAGCCGTCGTaGAGGTCTGTCTCGTGCACG | + |
|
Preference number: 4 (lower is better) Translates to: DSHPSRSTAADVARVAHIIGQPS*RSVSCT Trigger: CGTGCACGAGACAGACCTTCACGACGGCTGGCCGAT...AATATGAGCTACCCGTGCAACATCGGCTGCAGTGCTCCTGCTGGGATGAGAATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
||
| CDS-3UTR TCA 90 bp | CACATTTCCGGAAGAACTCCTGTTGGCAGAAGCTGCCCACGGGCACTTCTCCTCTGTCGACTGGGGAGCTaGCTGTCCCCTCTGCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: HISGRTPVGRSCPRALLLCRLGS*LSPLLV Trigger: AACAAGCAGAGGGGACAGTCAGCTCCCCAGTCGACA...GAGGAGAAGTGCCCGTGGGCAGCTTCTGCCAACAGGAGTTCTTCCGGAAATGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
||
| CDS-3UTR TCA 90 bp | TGCTGGATCCCAAGGGCACTCACTGAACCACCCTCCCATAACAAAGTGCTGCGTTGTCGACTGGGGAGCTaGCTGTCCCCTCTGCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: CWIPRALTEPPSHNKVLRCRLGS*LSPLLV Trigger: AACAAGCAGAGGGGACAGTCAGCTCCCCAGTCGACA...ACGCAGCACTTTGTTATGGGAGGGTGGTTCAGTGAGTGCCCTTGGGATCCAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
||
| CDS-3UTR CCA 90 bp | CGTGATCGATTCTCATCCCAGCAGGAGCACTGCAGCCGATGTTGCACGGGTAGCCAATCTGCTGACGGCTaGGCTGTTCTGACACAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RDRFSSQQEHCSRCCTGSQSADG*AVLTQD Trigger: ATCCTGTGTCAGAACAGCCCAGCCGTCAGCAGATTG...GCTACCCGTGCAACATCGGCTGCAGTGCTCCTGCTGGGATGAGAATCGATCACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
||
| CDS-3UTR TCA 90 bp | CACATTTCCGGAAGAACTCCTGTTGGCAGAAGCTGCCCACGGGCACTTCTCCTCATAGGTAGTACTCAATaGAGTGGGCAGCCGTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: HISGRTPVGRSCPRALLLIGSTQ*SGQPWA Trigger: TGCCCACGGCTGCCCACTTCATTGAGTACTACCTAT...GAGGAGAAGTGCCCGTGGGCAGCTTCTGCCAACAGGAGTTCTTCCGGAAATGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
||
| CDS-3UTR GCA 90 bp | CACATTTCCGGAAGAACTCCTGTTGGCAGAAGCTGCCCACGGGCACTTCTCCTCAGCCGTTCGATACACTaGACCAAGAAGTCCCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HISGRTPVGRSCPRALLLSRSIH*TKKSQE Trigger: CTCCTGGGACTTCTTGGTGCAGTGTATCGAACGGCT...GAGGAGAAGTGCCCGTGGGCAGCTTCTGCCAACAGGAGTTCTTCCGGAAATGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
||
| CDS-3UTR GCA 90 bp | TGCTGGATCCCAAGGGCACTCACTGAACCACCCTCCCATAACAAAGTGCTGCGTAGCCGTTCGATACACTaGACCAAGAAGTCCCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: CWIPRALTEPPSHNKVLRSRSIH*TKKSQE Trigger: CTCCTGGGACTTCTTGGTGCAGTGTATCGAACGGCT...ACGCAGCACTTTGTTATGGGAGGGTGGTTCAGTGAGTGCCCTTGGGATCCAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
||
| 3UTR CAA 72 bp | CCTTTTAAGGAAAGCACATTTCCGGAAGAACTCCTGTaGGCAGAAGCTGCCCACGGGCACTTCTCCTCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: PFKESTFPEELL*AEAAHGHFSSG Trigger: TCCGGAGGAGAAGTGCCCGTGGGCAGCTTCTGCCAACAGGAGTTCTTCCGGAAATGTGCTTTCCTTAAAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
||
| CDS-3UTR GCA 90 bp | GATTCTCATCCCAGCAGGAGCACTGCAGCCGATGTTGCACGGGTAGCTCATATTGCTGACTGTCCCCTCTaGTTGTTTGCTTCTTTCACG | + |
|
Preference number: 4 (lower is better) Translates to: DSHPSRSTAADVARVAHIADCPL*LFASFT Trigger: CGTGAAAGAAGCAAACAAGCAGAGGGGACAGTCAGC...AATATGAGCTACCCGTGCAACATCGGCTGCAGTGCTCCTGCTGGGATGAGAATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
||
| CDS-3UTR CCA 90 bp | ACTGAACCACCCTCCCATAACAAAGTGCTGCGTCAGCCCACGCTGAGCACTACCTCACCTCTCAAAGCATaGGGTAATACACGGGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: TEPPSHNKVLRQPTLSTTSPLKA*GNTREM Trigger: CATTTCCCGTGTATTACCCCATGCTTTGAGAGGTGA...GGTAGTGCTCAGCGTGGGCTGACGCAGCACTTTGTTATGGGAGGGTGGTTCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
||
| CDS-3UTR CCA 90 bp | ACTATTACTGCTGCTTTCACTCACTATCAATACAAAGACTTGTCTCCCGGCAGGGTCAGCTGTGTCGACTaGGGAGCTGACTGTCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TITAAFTHYQYKDLSPGRVSCVD*GADCPL Trigger: GAGGGGACAGTCAGCTCCCCAGTCGACACAGCTGAC...CCTGCCGGGAGACAAGTCTTTGTATTGATAGTGAGTGAAAGCAGCAGTAATAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
||
| 3UTR CAA 72 bp | TCAGTCAGGAACTGGGACATTTCTGTCACACAGGATTaGACACGTCAGTACCTGCAGAGCCCTCCTAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SVRNWDISVTQD*TRQYLQSPPKH Trigger: GTGCTTAGGAGGGCTCTGCAGGTACTGACGTGTCAAATCCTGTGTGACAGAAATGTCCCAGTTCCTGACTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
||
| CDS-3UTR CCA 90 bp | GAGCTCTCGCCAATAGACACTGTGTCTCATAGCTGCCACAGTTTCCCTTCTATTCAATCTGCTGACGGCTaGGCTGTTCTGACACAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ELSPIDTVSHSCHSFPSIQSADG*AVLTQD Trigger: ATCCTGTGTCAGAACAGCCCAGCCGTCAGCAGATTG...AATAGAAGGGAAACTGTGGCAGCTATGAGACACAGTGTCTATTGGCGAGAGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
||
| CDS-3UTR CCA 90 bp | TGCCTGACTTGCTGGATCCCAAGGGCACTCACTGAACCACCCTCCCATAACAAATCACCTCTCAAAGCATaGGGTAATACACGGGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: CLTCWIPRALTEPPSHNKSPLKA*GNTREM Trigger: CATTTCCCGTGTATTACCCCATGCTTTGAGAGGTGA...TTTGTTATGGGAGGGTGGTTCAGTGAGTGCCCTTGGGATCCAGCAAGTCAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
||
| CDS-3UTR CCA 90 bp | GTGATCGATTCTCATCCCAGCAGGAGCACTGCAGCCGATGTTGCACGGGTAGCTAGCGATTGCTCACAATaGCAATCAAATCAGCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: VIDSHPSRSTAADVARVASDCSQ*QSNQQN Trigger: ATTTTGCTGATTTGATTGCCATTGTGAGCAATCGCT...AGCTACCCGTGCAACATCGGCTGCAGTGCTCCTGCTGGGATGAGAATCGATCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
||
| CDS-3UTR TCA 90 bp | ACTATTACTGCTGCTTTCACTCACTATCAATACAAAGACTTGTCTCCCGGCAGGATAGGTAGTACTCAATaGAGTGGGCAGCCGTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TITAAFTHYQYKDLSPGRIGSTQ*SGQPWA Trigger: TGCCCACGGCTGCCCACTTCATTGAGTACTACCTAT...CCTGCCGGGAGACAAGTCTTTGTATTGATAGTGAGTGAAAGCAGCAGTAATAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
||
| CDS-3UTR CCA 90 bp | TACCTGAGTGGTTTTCATCACCAGGCCTTCTGTACGCTAAATATAAAAGTTAGCGAGGGCTGCGCTGTCTaGAACACAGTCAGCTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: YLSGFHHQAFCTLNIKVSEGCAV*NTVSCV Trigger: GACACAGCTGACTGTGTTCCAGACAGCGCAGCCCTC...GCTAACTTTTATATTTAGCGTACAGAAGGCCTGGTGATGAAAACCACTCAGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
||
| CDS-3UTR CCA 90 bp | TGCCTGACTTGCTGGATCCCAAGGGCACTCACTGAACCACCCTCCCATAACAAAAGCGATTGCTCACAATaGCAATCAAATCAGCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: CLTCWIPRALTEPPSHNKSDCSQ*QSNQQN Trigger: ATTTTGCTGATTTGATTGCCATTGTGAGCAATCGCT...TTTGTTATGGGAGGGTGGTTCAGTGAGTGCCCTTGGGATCCAGCAAGTCAGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
||
| CDS-3UTR TCA 90 bp | TACCTGAGTGGTTTTCATCACCAGGCCTTCTGTACGCTAAATATAAAAGTTAGCAGGCAGAGGTTCCACTaGAAGGTCTCTAACAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: YLSGFHHQAFCTLNIKVSRQRFH*KVSNRS Trigger: GCTCCTGTTAGAGACCTTTCAGTGGAACCTCTGCCT...GCTAACTTTTATATTTAGCGTACAGAAGGCCTGGTGATGAAAACCACTCAGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
||
| CDS-3UTR TCA 90 bp | TATGACTATTACTGCTGCTTTCACTCACTATCAATACAAAGACTTGTCTCCCGGAGGCAGAGGTTCCACTaGAAGGTCTCTAACAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: YDYYCCFHSLSIQRLVSRRQRFH*KVSNRS Trigger: GCTCCTGTTAGAGACCTTTCAGTGGAACCTCTGCCT...CCGGGAGACAAGTCTTTGTATTGATAGTGAGTGAAAGCAGCAGTAATAGTCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
||
| 3UTR CAA 72 bp | ATTACTGCTGCTTTCACTCACTATCAATACAAAGACTaGTCTCCCGGCAGGTACACAGCCAACCACAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ITAAFTHYQYKD*SPGRYTANHRK Trigger: CTTTCTGTGGTTGGCTGTGTACCTGCCGGGAGACAAGTCTTTGTATTGATAGTGAGTGAAAGCAGCAGTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
||
| CDS-3UTR GCA 90 bp | AGTGGTTTTCATCACCAGGCCTTCTGTACGCTAAATATAAAAGTTAGCTTCCTTGCTGACTGTCCCCTCTaGTTGTTTGCTTCTTTCACG | + |
|
Preference number: 4 (lower is better) Translates to: SGFHHQAFCTLNIKVSFLADCPL*LFASFT Trigger: CGTGAAAGAAGCAAACAAGCAGAGGGGACAGTCAGC...AAGGAAGCTAACTTTTATATTTAGCGTACAGAAGGCCTGGTGATGAAAACCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
||
| CDS-3UTR CAA 90 bp | GCATTCGTCCTGTGCCGTGATCGATTCTCATCCCAGCAGGAGCACTGCAGCCGATGCAGCAGGGTCTGCTaGGTGAGCACGAGGTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: AFVLCRDRFSSQQEHCSRCSRVC*VSTRFM Trigger: CATGAACCTCGTGCTCACCAAGCAGACCCTGCTGCA...TCGGCTGCAGTGCTCCTGCTGGGATGAGAATCGATCACGGCACAGGACGAATGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
||
| CDS-3UTR CAA 90 bp | GTGATCGATTCTCATCCCAGCAGGAGCACTGCAGCCGATGTTGCACGGGTAGCTTGCAGCAGGGTCTGCTaGGTGAGCACGAGGTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: VIDSHPSRSTAADVARVACSRVC*VSTRFM Trigger: CATGAACCTCGTGCTCACCAAGCAGACCCTGCTGCA...AGCTACCCGTGCAACATCGGCTGCAGTGCTCCTGCTGGGATGAGAATCGATCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
||
| CDS-3UTR CAA 90 bp | CTCCTGAAAACTGCCTTCAGGAGCAACAGCCAATCACTGGGTGATGCCCAGCCTATACAGCCCAGGCTATaGAGCTGCTCGAGCTTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LLKTAFRSNSQSLGDAQPIQPRL*SCSSLG Trigger: GCCTAAGCTCGAGCAGCTCAATAGCCTGGGCTGTAT...AGGCTGGGCATCACCCAGTGATTGGCTGTTGCTCCTGAAGGCAGTTTTCAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
||
| CDS-3UTR CAA 90 bp | TACCTGAGTGGTTTTCATCACCAGGCCTTCTGTACGCTAAATATAAAAGTTAGCATACAGCCCAGGCTATaGAGCTGCTCGAGCTTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: YLSGFHHQAFCTLNIKVSIQPRL*SCSSLG Trigger: GCCTAAGCTCGAGCAGCTCAATAGCCTGGGCTGTAT...GCTAACTTTTATATTTAGCGTACAGAAGGCCTGGTGATGAAAACCACTCAGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
||
| CDS-3UTR CAA 90 bp | ATGACTATTACTGCTGCTTTCACTCACTATCAATACAAAGACTTGTCTCCCGGCGACTGTCCCCTCTGCTaGTTTGCTTCTTTCACGTCG | + |
|
Preference number: 5 (lower is better) Translates to: MTITAAFTHYQYKDLSPGDCPLC*FASFTS Trigger: CGACGTGAAAGAAGCAAACAAGCAGAGGGGACAGTC...GCCGGGAGACAAGTCTTTGTATTGATAGTGAGTGAAAGCAGCAGTAATAGTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
||
| CDS TCA 72 bp | ACAGGAGCAGCTCCATATGCAGCAGGGTCTGCTTGGTaGGCACGAGGTTCATGTTCGTCATACAGCCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: TGAAPYAAGSAW*ARGSCSSYSPG Trigger: GCCTGGGCTGTATGACGAACATGAACCTCGTGCTCACCAAGCAGACCCTGCTGCATATGGAGCTGCTCCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
||
| CDS TCA 72 bp | TGTGGTAGACACAATCTGCTGACGGCTGGGCTGTTCTaGCACAGGATGCCGGTACTGCAGGGAGCTCTGATG | + |
|
Preference number: 6 (lower is better) Translates to: CGRHNLLTAGLF*HRMPVLQGALM Trigger: CATCAGAGCTCCCTGCAGTACCGGCATCCTGTGTCAGAACAGCCCAGCCGTCAGCAGATTGTGTCTACCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
||
| CDS CAA 72 bp | TCTAACAGGAGCAGCTCCATATGCAGCAGGGTCTGCTaGGTGAGCACGAGGTTCATGTTCGTCATACAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: SNRSSSICSRVC*VSTRFMFVIQP Trigger: GGGCTGTATGACGAACATGAACCTCGTGCTCACCAAGCAGACCCTGCTGCATATGGAGCTGCTCCTGTTAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
||
| CDS GCA 72 bp | GTCTCTAACAGGAGCAGCTCCATATGCAGCAGGGTCTaGTTGGTGAGCACGAGGTTCATGTTCGTCATACAG | + |
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Preference number: 6 (lower is better) Translates to: VSNRSSSICSRV*LVSTRFMFVIQ Trigger: CTGTATGACGAACATGAACCTCGTGCTCACCAAGCAGACCCTGCTGCATATGGAGCTGCTCCTGTTAGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025983.13 ENSMUST00000119316.2 |
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