Pregenerated sensors for CCNI (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063015Ensembl transcript IDs: ENSMUST00000058550.15, ENSMUST00000144514.3, ENSMUST00000151568.8, ENSMUST00000201823.4
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAACATTTTATTGCTACCAGAGGCTTTATCAGCAGTACATGGTTCTaGCTGCAGTGCCTTCAGACTGCAAAGGGAGCTCAGGGTCCAGAC | + |
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Preference number: 1 (lower is better) Translates to: QHFIATRGFISSTWF*LQCLQTAKGAQGPD Trigger: GTCTGGACCCTGAGCTCCCTTTGCAGTCTGAAGGCACTGCAGTCAGAACCATGTACTGCTGATAAAGCCTCTGGTAGCAATAAAATGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| 3UTR GCA 90 bp | ATTTTATTGCTACCAGAGGCTTTATCAGCAGTACATGGTTCTGACTaGAGTGCCTTCAGACTGCAAAGGGAGCTCAGGGTCCAGACATTG | + |
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Preference number: 1 (lower is better) Translates to: ILLLPEALSAVHGSD*SAFRLQRELRVQTL Trigger: CAATGTCTGGACCCTGAGCTCCCTTTGCAGTCTGAAGGCACTGCAGTCAGAACCATGTACTGCTGATAAAGCCTCTGGTAGCAATAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| 3UTR CCA 90 bp | GGGATAGCTTCAAAGTGCCCTTTTCAAACTAACATACTTGAACTGTaGATTAAACATGGCTGCCACACAAAAATAATTTACTTACTGAAT | + |
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Preference number: 1 (lower is better) Translates to: GIASKCPFQTNILEL*IKHGCHTKIIYLLN Trigger: ATTCAGTAAGTAAATTATTTTTGTGTGGCAGCCATGTTTAATCCACAGTTCAAGTATGTTAGTTTGAAAAGGGCACTTTGAAGCTATCCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| 3UTR CAA 90 bp | GACTGCAGTGCCTTCAGACTGCAAAGGGAGCTCAGGGTCCAGACATaGCTCAGAGAGAAACAAGGGAATAATTCCTTATCAAGAAAATCC | + |
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Preference number: 2 (lower is better) Translates to: DCSAFRLQRELRVQT*LREKQGNNSLSRKS Trigger: GGATTTTCTTGATAAGGAATTATTCCCTTGTTTCTCTCTGAGCAATGTCTGGACCCTGAGCTCCCTTTGCAGTCTGAAGGCACTGCAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| 3UTR-3UTR TCA 90 bp | ACTCAAATCAGGGCTGCCCCAGTATCTAGACAGTTGCTTCTACGGATTATAAATTACATGTTTCTTTGGTaGGCACCTGGATATATTAAC | + |
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Preference number: 2 (lower is better) Translates to: TQIRAAPVSRQLLLRIINYMFLW*APGYIN Trigger: GTTAATATATCCAGGTGCTCACCAAAGAAACATGTA...ATTTATAATCCGTAGAAGCAACTGTCTAGATACTGGGGCAGCCCTGATTTGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| 3UTR CAA 90 bp | TATAAGTTACAGACTCAAATCAGGGCTGCCCCAGTATCTAGACAGTaGCTTCTACGGATTATAAATGAGCAAGAACAGATCAGTTACAAA | + |
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Preference number: 2 (lower is better) Translates to: YKLQTQIRAAPVSRQ*LLRIINEQEQISYK Trigger: TTTGTAACTGATCTGTTCTTGCTCATTTATAATCCGTAGAAGCAACTGTCTAGATACTGGGGCAGCCCTGATTTGAGTCTGTAACTTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| 3UTR GCA 72 bp | CTACCAGAGGCTTTATCAGCAGTACATGGTTCTGACTaGAGTGCCTTCAGACTGCAAAGGGAGCTCAGGGTC | + |
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Preference number: 3 (lower is better) Translates to: LPEALSAVHGSD*SAFRLQRELRV Trigger: GACCCTGAGCTCCCTTTGCAGTCTGAAGGCACTGCAGTCAGAACCATGTACTGCTGATAAAGCCTCTGGTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| 3UTR TCA 72 bp | ATTGCTACCAGAGGCTTTATCAGCAGTACATGGTTCTaGCTGCAGTGCCTTCAGACTGCAAAGGGAGCTCAG | + |
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Preference number: 3 (lower is better) Translates to: IATRGFISSTWF*LQCLQTAKGAQ Trigger: CTGAGCTCCCTTTGCAGTCTGAAGGCACTGCAGTCAGAACCATGTACTGCTGATAAAGCCTCTGGTAGCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS-3UTR CCA 90 bp | CACAGCCTTCCCTGGGTTTCTAGTCTCACCCCGAGTAGTCAGCCTTCGTGTGCATTTGCTTGCACCCACTaGCAGCGGGGAGATGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: HSLPWVSSLTPSSQPSCAFACTH*QRGDAG Trigger: ACCTGCATCTCCCCGCTGCCAGTGGGTGCAAGCAAA...TGCACACGAAGGCTGACTACTCGGGGTGAGACTAGAAACCCAGGGAAGGCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS-3UTR TCA 90 bp | CACAGCCTTCCCTGGGTTTCTAGTCTCACCCCGAGTAGTCAGCCTTCGTGTGCAAAACTGAAAAGTAACTaGGGCCTAGCTGACACCGCA | + |
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Preference number: 4 (lower is better) Translates to: HSLPWVSSLTPSSQPSCAKLKSN*GLADTA Trigger: TGCGGTGTCAGCTAGGCCTCAGTTACTTTTCAGTTT...TGCACACGAAGGCTGACTACTCGGGGTGAGACTAGAAACCCAGGGAAGGCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS-3UTR CCA 90 bp | TTCCTGGCTCACTTCAGTCAGTCTGATAAAGCACATGCCTTCTCCACAGCCTTCAACAGGCTGCAAAGGTaGACAGGGGGAAGCATGGCC | + |
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Preference number: 4 (lower is better) Translates to: FLAHFSQSDKAHAFSTAFNRLQR*TGGSMA Trigger: GGCCATGCTTCCCCCTGTCCACCTTTGCAGCCTGTT...GAAGGCTGTGGAGAAGGCATGTGCTTTATCAGACTGACTGAAGTGAGCCAGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS-3UTR TCA 90 bp | TTCCTGGCTCACTTCAGTCAGTCTGATAAAGCACATGCCTTCTCCACAGCCTTCTGCAGAGCAGAAAGGTaGTATGCCACCAGCTCCCGA | + |
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Preference number: 4 (lower is better) Translates to: FLAHFSQSDKAHAFSTAFCRAER*YATSSR Trigger: TCGGGAGCTGGTGGCATATCACCTTTCTGCTCTGCA...GAAGGCTGTGGAGAAGGCATGTGCTTTATCAGACTGACTGAAGTGAGCCAGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS-3UTR CCA 90 bp | ACTCAAATCAGGGCTGCCCCAGTATCTAGACAGTTGCTTCTACGGATTATAAATGCGGGGAGATGCAGGTaGAAGGCTGCTGGACCTCGG | + |
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Preference number: 4 (lower is better) Translates to: TQIRAAPVSRQLLLRIINAGRCR*KAAGPR Trigger: CCGAGGTCCAGCAGCCTTCCACCTGCATCTCCCCGC...ATTTATAATCCGTAGAAGCAACTGTCTAGATACTGGGGCAGCCCTGATTTGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS-3UTR GCA 90 bp | AATAAGGACACTGGAACAAGGTTCCTAGCTGAGAGTTTGCAACTTTCCGCTAAACTGGCAGCGGGGAGATaGAGGTGGAAGGCTGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: NKDTGTRFLAESLQLSAKLAAGR*RWKAAG Trigger: TCCAGCAGCCTTCCACCTGCATCTCCCCGCTGCCAG...TTTAGCGGAAAGTTGCAAACTCTCAGCTAGGAACCTTGTTCCAGTGTCCTTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS-3UTR GCA 90 bp | GATAAAGCACATGCCTTCTCCACAGCCTTCCCTGGGTTTCTAGTCTCACCCCGAGAAGCATGGCCCTCTTaGCTTGATAAATCAGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: DKAHAFSTAFPGFLVSPREAWPS*LDKSVP Trigger: TGGCACTGATTTATCAAGGCAAGAGGGCCATGCTTC...TCGGGGTGAGACTAGAAACCCAGGGAAGGCTGTGGAGAAGGCATGTGCTTTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS-3UTR TCA 90 bp | TTCCTGGCTCACTTCAGTCAGTCTGATAAAGCACATGCCTTCTCCACAGCCTTCAGGACTGCCAAATGTTaGGATGGGCTCAATTTGGGC | + |
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Preference number: 4 (lower is better) Translates to: FLAHFSQSDKAHAFSTAFRTAKC*DGLNLG Trigger: GCCCAAATTGAGCCCATCTCAACATTTGGCAGTCCT...GAAGGCTGTGGAGAAGGCATGTGCTTTATCAGACTGACTGAAGTGAGCCAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS-3UTR TCA 90 bp | TTCCTGGCTCACTTCAGTCAGTCTGATAAAGCACATGCCTTCTCCACAGCCTTCCAAGCATGGACCCTTTaGACTGCAGAAGTTGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: FLAHFSQSDKAHAFSTAFQAWTL*TAEVGC Trigger: GCAACCAACTTCTGCAGTTCAAAGGGTCCATGCTTG...GAAGGCTGTGGAGAAGGCATGTGCTTTATCAGACTGACTGAAGTGAGCCAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS-3UTR TCA 90 bp | GCACATGCCTTCTCCACAGCCTTCCCTGGGTTTCTAGTCTCACCCCGAGTAGTCATGGCATGGAAAATGTaGAGAAAATCCAATGGTGTA | + |
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Preference number: 4 (lower is better) Translates to: AHAFSTAFPGFLVSPRVVMAWKM*RKSNGV Trigger: TACACCATTGGATTTTCTTCACATTTTCCATGCCAT...GACTACTCGGGGTGAGACTAGAAACCCAGGGAAGGCTGTGGAGAAGGCATGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS-3UTR TCA 90 bp | TTCCTGGCTCACTTCAGTCAGTCTGATAAAGCACATGCCTTCTCCACAGCCTTCCATTATAGAGCCGCTTaGTCCCATCGTAGAAGTCAT | + |
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Preference number: 4 (lower is better) Translates to: FLAHFSQSDKAHAFSTAFHYRAA*SHRRSH Trigger: ATGACTTCTACGATGGGATCAAGCGGCTCTATAATG...GAAGGCTGTGGAGAAGGCATGTGCTTTATCAGACTGACTGAAGTGAGCCAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS-3UTR CCA 90 bp | GAATTAAATTATAAGTTACAGACTCAAATCAGGGCTGCCCCAGTATCTAGACAGCAGGTGGAAGGCTGCTaGACCTCGGACTGGCACTTC | + |
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Preference number: 4 (lower is better) Translates to: ELNYKLQTQIRAAPVSRQQVEGC*TSDWHF Trigger: GAAGTGCCAGTCCGAGGTCCAGCAGCCTTCCACCTG...CTGTCTAGATACTGGGGCAGCCCTGATTTGAGTCTGTAACTTATAATTTAATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS-3UTR GCA 90 bp | ATTTTATTGCTACCAGAGGCTTTATCAGCAGTACATGGTTCTGACTGCAGTGCCGGCTTCCCTGGAGATTaGCCTTTCCAACAGAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: ILLLPEALSAVHGSDCSAGFPGD*PFQQRR Trigger: TCTTCTCTGTTGGAAAGGGCAATCTCCAGGGAAGCC...GGCACTGCAGTCAGAACCATGTACTGCTGATAAAGCCTCTGGTAGCAATAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS-3UTR CCA 90 bp | TTCCTGGCTCACTTCAGTCAGTCTGATAAAGCACATGCCTTCTCCACAGCCTTCAGAGAAGACAATCTCTaGTTTTCCAAAGGTCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: FLAHFSQSDKAHAFSTAFREDNL*FSKGPG Trigger: TCCAGGACCTTTGGAAAACCAGAGATTGTCTTCTCT...GAAGGCTGTGGAGAAGGCATGTGCTTTATCAGACTGACTGAAGTGAGCCAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS-3UTR CCA 90 bp | GCCCCAGTATCTAGACAGTTGCTTCTACGGATTATAAATGAGCAAGAACAGATCTTCACCTTCCACATCTaGGCTTCCCTGGAGATTGCC | + |
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Preference number: 4 (lower is better) Translates to: APVSRQLLLRIINEQEQIFTFHI*ASLEIA Trigger: GGCAATCTCCAGGGAAGCCCAGATGTGGAAGGTGAA...GATCTGTTCTTGCTCATTTATAATCCGTAGAAGCAACTGTCTAGATACTGGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS-3UTR CCA 90 bp | GAATTAAATTATAAGTTACAGACTCAAATCAGGGCTGCCCCAGTATCTAGACAGACCAGCTCCCGACAGTaGATCAACTGGGAGCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: ELNYKLQTQIRAAPVSRQTSSRQ*INWELS Trigger: GGACAGCTCCCAGTTGATCCACTGTCGGGAGCTGGT...CTGTCTAGATACTGGGGCAGCCCTGATTTGAGTCTGTAACTTATAATTTAATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS-3UTR CCA 90 bp | ATTTTATTGCTACCAGAGGCTTTATCAGCAGTACATGGTTCTGACTGCAGTGCCGCTTGCTGTTGTCCTTaGAGAAATCTGGGCCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: ILLLPEALSAVHGSDCSAACCCP*RNLGLR Trigger: TCTCAGGCCCAGATTTCTCCAAGGACAACAGCAAGC...GGCACTGCAGTCAGAACCATGTACTGCTGATAAAGCCTCTGGTAGCAATAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS-3UTR TCA 90 bp | AAAGGTGGGTGGTACTCAAGTGAAGTCAGAATACATAGATCAACAAGCACACAGTTACCAGGGTGTGCTTaGGGGGACGGTAGACATAAA | + |
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Preference number: 4 (lower is better) Translates to: KGGWYSSEVRIHRSTSTQLPGCA*GDGRHK Trigger: TTTATGTCTACCGTCCCCTCAAGCACACCCTGGTAA...CTGTGTGCTTGTTGATCTATGTATTCTGACTTCACTTGAGTACCACCCACCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS-3UTR GCA 90 bp | AAAGGTGGGTGGTACTCAAGTGAAGTCAGAATACATAGATCAACAAGCACACAGATGGACCCTTTGAACTaGAGAAGTTGGTTGCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: KGGWYSSEVRIHRSTSTQMDPLN*RSWLQA Trigger: GGCCTGCAACCAACTTCTGCAGTTCAAAGGGTCCAT...CTGTGTGCTTGTTGATCTATGTATTCTGACTTCACTTGAGTACCACCCACCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS-3UTR GCA 90 bp | CCAGTATCTAGACAGTTGCTTCTACGGATTATAAATGAGCAAGAACAGATCAGTCGTTTAGCAGAGGTTTaGTTGCACCCACTGGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: PVSRQLLLRIINEQEQISRLAEV*LHPLAA Trigger: CGCTGCCAGTGGGTGCAAGCAAACCTCTGCTAAACG...ACTGATCTGTTCTTGCTCATTTATAATCCGTAGAAGCAACTGTCTAGATACTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS-3UTR GCA 90 bp | ACTCAAATCAGGGCTGCCCCAGTATCTAGACAGTTGCTTCTACGGATTATAAATATGACAGAAACAGGCTaGAAAGGTGGACAGGGGGAA | + |
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Preference number: 4 (lower is better) Translates to: TQIRAAPVSRQLLLRIINMTETG*KGGQGE Trigger: TTCCCCCTGTCCACCTTTGCAGCCTGTTTCTGTCAT...ATTTATAATCCGTAGAAGCAACTGTCTAGATACTGGGGCAGCCCTGATTTGAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS-3UTR CCA 90 bp | AATAAGGACACTGGAACAAGGTTCCTAGCTGAGAGTTTGCAACTTTCCGCTAAAACATCTGGGCTTCCCTaGAGATTGCCCTTTCCAACA | + |
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Preference number: 4 (lower is better) Translates to: NKDTGTRFLAESLQLSAKTSGLP*RLPFPT Trigger: TGTTGGAAAGGGCAATCTCCAGGGAAGCCCAGATGT...TTTAGCGGAAAGTTGCAAACTCTCAGCTAGGAACCTTGTTCCAGTGTCCTTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS-3UTR CCA 90 bp | GAATTAAATTATAAGTTACAGACTCAAATCAGGGCTGCCCCAGTATCTAGACAGTGCTGGACCTCGGACTaGCACTTCTGGCTTGCTGTT | + |
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Preference number: 4 (lower is better) Translates to: ELNYKLQTQIRAAPVSRQCWTSD*HFWLAV Trigger: AACAGCAAGCCAGAAGTGCCAGTCCGAGGTCCAGCA...CTGTCTAGATACTGGGGCAGCCCTGATTTGAGTCTGTAACTTATAATTTAATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS-3UTR GCA 90 bp | AATAAGGACACTGGAACAAGGTTCCTAGCTGAGAGTTTGCAACTTTCCGCTAAAACTGCAGAAGTTGGTTaGAGGCCATACAGTGAAGCA | + |
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Preference number: 4 (lower is better) Translates to: NKDTGTRFLAESLQLSAKTAEVG*RPYSEA Trigger: TGCTTCACTGTATGGCCTGCAACCAACTTCTGCAGT...TTTAGCGGAAAGTTGCAAACTCTCAGCTAGGAACCTTGTTCCAGTGTCCTTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS-3UTR GCA 90 bp | ACTCAAATCAGGGCTGCCCCAGTATCTAGACAGTTGCTTCTACGGATTATAAATCTGGCACTTCTGGCTTaGTGTTGTCCTTGGAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: TQIRAAPVSRQLLLRIINLALLA*CCPWRN Trigger: ATTTCTCCAAGGACAACAGCAAGCCAGAAGTGCCAG...ATTTATAATCCGTAGAAGCAACTGTCTAGATACTGGGGCAGCCCTGATTTGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS-3UTR CCA 90 bp | GAATTAAATTATAAGTTACAGACTCAAATCAGGGCTGCCCCAGTATCTAGACAGTCGGACTGGCACTTCTaGCTTGCTGTTGTCCTTGGA | + |
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Preference number: 4 (lower is better) Translates to: ELNYKLQTQIRAAPVSRQSDWHF*LAVVLG Trigger: TCCAAGGACAACAGCAAGCCAGAAGTGCCAGTCCGA...CTGTCTAGATACTGGGGCAGCCCTGATTTGAGTCTGTAACTTATAATTTAATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| 3UTR CAA 72 bp | CAGACTCAAATCAGGGCTGCCCCAGTATCTAGACAGTaGCTTCTACGGATTATAAATGAGCAAGAACAGATC | + |
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Preference number: 4 (lower is better) Translates to: QTQIRAAPVSRQ*LLRIINEQEQI Trigger: GATCTGTTCTTGCTCATTTATAATCCGTAGAAGCAACTGTCTAGATACTGGGGCAGCCCTGATTTGAGTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS-3UTR GCA 90 bp | CCAGTATCTAGACAGTTGCTTCTACGGATTATAAATGAGCAAGAACAGATCAGTCTGCTTGGTCAGGACTaGCAAATGTTGAGATGGGCT | + |
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Preference number: 4 (lower is better) Translates to: PVSRQLLLRIINEQEQISLLGQD*QMLRWA Trigger: AGCCCATCTCAACATTTGGCAGTCCTGACCAAGCAG...ACTGATCTGTTCTTGCTCATTTATAATCCGTAGAAGCAACTGTCTAGATACTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS-3UTR TCA 90 bp | CAAATCAGGGCTGCCCCAGTATCTAGACAGTTGCTTCTACGGATTATAAATGAGAATGGTGTAGCCGTGTaGAGATCCCAATTCAATTTA | + |
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Preference number: 4 (lower is better) Translates to: QIRAAPVSRQLLLRIINENGVAV*RSQFNL Trigger: TAAATTGAATTGGGATCTTCACACGGCTACACCATT...CTCATTTATAATCCGTAGAAGCAACTGTCTAGATACTGGGGCAGCCCTGATTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS-3UTR TCA 90 bp | AAAGGTGGGTGGTACTCAAGTGAAGTCAGAATACATAGATCAACAAGCACACAGTCCATCTGTGCTTTCTaGAGCAGTTCAATCGTAAGA | + |
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Preference number: 4 (lower is better) Translates to: KGGWYSSEVRIHRSTSTQSICAF*SSSIVR Trigger: TCTTACGATTGAACTGCTTCAGAAAGCACAGATGGA...CTGTGTGCTTGTTGATCTATGTATTCTGACTTCACTTGAGTACCACCCACCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS-3UTR TCA 90 bp | ACTCAAATCAGGGCTGCCCCAGTATCTAGACAGTTGCTTCTACGGATTATAAATGATGGAGAAACATTCTaGTTTGTAGGTATTTTCGGC | + |
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Preference number: 4 (lower is better) Translates to: TQIRAAPVSRQLLLRIINDGETF*FVGIFG Trigger: GCCGAAAATACCTACAAATCAGAATGTTTCTCCATC...ATTTATAATCCGTAGAAGCAACTGTCTAGATACTGGGGCAGCCCTGATTTGAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS-3UTR TCA 90 bp | GAATTAAATTATAAGTTACAGACTCAAATCAGGGCTGCCCCAGTATCTAGACAGGAAGCCAATCAGGAATaGGTTTCTCCATTTCCAGAC | + |
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Preference number: 4 (lower is better) Translates to: ELNYKLQTQIRAAPVSRQEANQE*VSPFPD Trigger: GTCTGGAAATGGAGAAACTCATTCCTGATTGGCTTC...CTGTCTAGATACTGGGGCAGCCCTGATTTGAGTCTGTAACTTATAATTTAATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS-3UTR TCA 90 bp | AAAAGAAAAGGTGGGTGGTACTCAAGTGAAGTCAGAATACATAGATCAACAAGCAGGAGGGATGTAATTTaGATGCTCCTTTGTCACAGG | + |
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Preference number: 4 (lower is better) Translates to: KRKGGWYSSEVRIHRSTSRRDVI*MLLCHR Trigger: CCTGTGACAAAGGAGCATTCAAATTACATCCCTCCT...GCTTGTTGATCTATGTATTCTGACTTCACTTGAGTACCACCCACCTTTTCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS-3UTR GCA 90 bp | CCAGTATCTAGACAGTTGCTTCTACGGATTATAAATGAGCAAGAACAGATCAGTATCCAAAAGACTGCTTaGCAGAGCAAATGTTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: PVSRQLLLRIINEQEQISIQKTA*QSKCFW Trigger: CCAGAAACATTTGCTCTGGCAAGCAGTCTTTTGGAT...ACTGATCTGTTCTTGCTCATTTATAATCCGTAGAAGCAACTGTCTAGATACTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS-3UTR CCA 90 bp | AAAAGAAAAGGTGGGTGGTACTCAAGTGAAGTCAGAATACATAGATCAACAAGCGTGAAGAAAATCCAATaGTGTAGCCGTGTGAAGATC | + |
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Preference number: 4 (lower is better) Translates to: KRKGGWYSSEVRIHRSTSVKKIQ*CSRVKI Trigger: GATCTTCACACGGCTACACCATTGGATTTTCTTCAC...GCTTGTTGATCTATGTATTCTGACTTCACTTGAGTACCACCCACCTTTTCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS-3UTR TCA 90 bp | GAATTAAATTATAAGTTACAGACTCAAATCAGGGCTGCCCCAGTATCTAGACAGTCTCAAAATCTCAGATaGGGAACATCCACAGAAACT | + |
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Preference number: 4 (lower is better) Translates to: ELNYKLQTQIRAAPVSRQSQNLR*GTSTET Trigger: AGTTTCTGTGGATGTTCCTCATCTGAGATTTTGAGA...CTGTCTAGATACTGGGGCAGCCCTGATTTGAGTCTGTAACTTATAATTTAATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS-3UTR GCA 90 bp | AAAAGAAAAGGTGGGTGGTACTCAAGTGAAGTCAGAATACATAGATCAACAAGCACCTATCCAAAAGACTaGTTGCCAGAGCAAATGTTT | + |
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Preference number: 4 (lower is better) Translates to: KRKGGWYSSEVRIHRSTSTYPKD*LPEQMF Trigger: AAACATTTGCTCTGGCAAGCAGTCTTTTGGATAGGT...GCTTGTTGATCTATGTATTCTGACTTCACTTGAGTACCACCCACCTTTTCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS-3UTR GCA 90 bp | ACTCAAGTGAAGTCAGAATACATAGATCAACAAGCACACAGCTTAGTTAAGTATGGAGCTGTCCATCTGTaGTTTCTGAAGCAGTTCAAT | + |
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Preference number: 4 (lower is better) Translates to: TQVKSEYIDQQAHSLVKYGAVHL*FLKQFN Trigger: ATTGAACTGCTTCAGAAAGCACAGATGGACAGCTCC...ATACTTAACTAAGCTGTGTGCTTGTTGATCTATGTATTCTGACTTCACTTGAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS-3UTR TCA 90 bp | ACTCAAGTGAAGTCAGAATACATAGATCAACAAGCACACAGCTTAGTTAAGTATAGTTTGGCCAACCATTaGATTACTTCATCTCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: TQVKSEYIDQQAHSLVKYSLANH*ITSSLW Trigger: CCAGAGAGATGAAGTAATTCAATGGTTGGCCAAACT...ATACTTAACTAAGCTGTGTGCTTGTTGATCTATGTATTCTGACTTCACTTGAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS-3UTR CCA 90 bp | ACTCAAGTGAAGTCAGAATACATAGATCAACAAGCACACAGCTTAGTTAAGTATTGCCAAATGTTGAGATaGGCTCAATTTGGGCAAACT | + |
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Preference number: 4 (lower is better) Translates to: TQVKSEYIDQQAHSLVKYCQMLR*AQFGQT Trigger: AGTTTGCCCAAATTGAGCCCATCTCAACATTTGGCA...ATACTTAACTAAGCTGTGTGCTTGTTGATCTATGTATTCTGACTTCACTTGAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS-3UTR CCA 90 bp | ACTCAAGTGAAGTCAGAATACATAGATCAACAAGCACACAGCTTAGTTAAGTATCAGAGCAAATGTTTCTaGATAGAGGTTGAACTGGTA | + |
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Preference number: 4 (lower is better) Translates to: TQVKSEYIDQQAHSLVKYQSKCF*IEVELV Trigger: TACCAGTTCAACCTCTATCCAGAAACATTTGCTCTG...ATACTTAACTAAGCTGTGTGCTTGTTGATCTATGTATTCTGACTTCACTTGAGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS GCA 90 bp | GGTTTGCTTGCACCCACTGGCAGCGGGGAGATGCAGGTGGAAGGCTaGTGGACCTCGGACTGGCACTTCTGGCTTGCTGTTGTCCTTGGA | + |
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Preference number: 5 (lower is better) Translates to: GLLAPTGSGEMQVEG*WTSDWHFWLAVVLG Trigger: TCCAAGGACAACAGCAAGCCAGAAGTGCCAGTCCGAGGTCCAGCAGCCTTCCACCTGCATCTCCCCGCTGCCAGTGGGTGCAAGCAAACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS GCA 90 bp | TTCCGTTTAGCAGAGGTTTGCTTGCACCCACTGGCAGCGGGGAGATaGAGGTGGAAGGCTGCTGGACCTCGGACTGGCACTTCTGGCTTG | + |
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Preference number: 5 (lower is better) Translates to: FRLAEVCLHPLAAGR*RWKAAGPRTGTSGL Trigger: CAAGCCAGAAGTGCCAGTCCGAGGTCCAGCAGCCTTCCACCTGCATCTCCCCGCTGCCAGTGGGTGCAAGCAAACCTCTGCTAAACGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS CCA 90 bp | TTGCTTGCACCCACTGGCAGCGGGGAGATGCAGGTGGAAGGCTGCTaGACCTCGGACTGGCACTTCTGGCTTGCTGTTGTCCTTGGAGAA | + |
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Preference number: 5 (lower is better) Translates to: LLAPTGSGEMQVEGC*TSDWHFWLAVVLGE Trigger: TTCTCCAAGGACAACAGCAAGCCAGAAGTGCCAGTCCGAGGTCCAGCAGCCTTCCACCTGCATCTCCCCGCTGCCAGTGGGTGCAAGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS CCA 90 bp | TTAGCAGAGGTTTGCTTGCACCCACTGGCAGCGGGGAGATGCAGGTaGAAGGCTGCTGGACCTCGGACTGGCACTTCTGGCTTGCTGTTG | + |
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Preference number: 5 (lower is better) Translates to: LAEVCLHPLAAGRCR*KAAGPRTGTSGLLL Trigger: CAACAGCAAGCCAGAAGTGCCAGTCCGAGGTCCAGCAGCCTTCCACCTGCATCTCCCCGCTGCCAGTGGGTGCAAGCAAACCTCTGCTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS GCA 90 bp | GATGCAGGTGGAAGGCTGCTGGACCTCGGACTGGCACTTCTGGCTTaGTGTTGTCCTTGGAGAAATCTGGGCCTGAGACAGAGGAGGGAT | + |
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Preference number: 5 (lower is better) Translates to: DAGGRLLDLGLALLA*CCPWRNLGLRQRRD Trigger: ATCCCTCCTCTGTCTCAGGCCCAGATTTCTCCAAGGACAACAGCAAGCCAGAAGTGCCAGTCCGAGGTCCAGCAGCCTTCCACCTGCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS-3UTR CAA 90 bp | CACAGCCTTCCCTGGGTTTCTAGTCTCACCCCGAGTAGTCAGCCTTCGTGTGCACCGTTTAGCAGAGGTTaGCTTGCACCCACTGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: HSLPWVSSLTPSSQPSCAPFSRG*LAPTGS Trigger: GCTGCCAGTGGGTGCAAGCAAACCTCTGCTAAACGG...TGCACACGAAGGCTGACTACTCGGGGTGAGACTAGAAACCCAGGGAAGGCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS GCA 90 bp | AAGTCATCCACCTCCATCTCCTCCACTTTCCGTTTAGCAGAGGTTTaGTTGCACCCACTGGCAGCGGGGAGATGCAGGTGGAAGGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: KSSTSISSTFRLAEV*LHPLAAGRCRWKAA Trigger: AGCAGCCTTCCACCTGCATCTCCCCGCTGCCAGTGGGTGCAAGCAAACCTCTGCTAAACGGAAAGTGGAGGAGATGGAGGTGGATGACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS GCA 90 bp | ACAGAAACAGGCTGCAAAGGTGGACAGGGGGAAGCATGGCCCTCTTaGCTTGATAAATCAGTGCCACATACAGAACCCACATTCTCAGGA | + |
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Preference number: 5 (lower is better) Translates to: TETGCKGGQGEAWPS*LDKSVPHTEPTFSG Trigger: TCCTGAGAATGTGGGTTCTGTATGTGGCACTGATTTATCAAGGCAAGAGGGCCATGCTTCCCCCTGTCCACCTTTGCAGCCTGTTTCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS-3UTR CAA 90 bp | GCACATGCCTTCTCCACAGCCTTCCCTGGGTTTCTAGTCTCACCCCGAGTAGTCTATCCAAAAGACTGCTaGCCAGAGCAAATGTTTCTG | + |
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Preference number: 5 (lower is better) Translates to: AHAFSTAFPGFLVSPRVVYPKDC*PEQMFL Trigger: CAGAAACATTTGCTCTGGCAAGCAGTCTTTTGGATA...GACTACTCGGGGTGAGACTAGAAACCCAGGGAAGGCTGTGGAGAAGGCATGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS-3UTR CAA 90 bp | GCCCCAGTATCTAGACAGTTGCTTCTACGGATTATAAATGAGCAAGAACAGATCCAGGACTGCCAAATGTaGAGATGGGCTCAATTTGGG | + |
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Preference number: 5 (lower is better) Translates to: APVSRQLLLRIINEQEQIQDCQM*RWAQFG Trigger: CCCAAATTGAGCCCATCTCAACATTTGGCAGTCCTG...GATCTGTTCTTGCTCATTTATAATCCGTAGAAGCAACTGTCTAGATACTGGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS-3UTR CAA 90 bp | ACTCAAATCAGGGCTGCCCCAGTATCTAGACAGTTGCTTCTACGGATTATAAATGCAAGCATGGACCCTTaGAACTGCAGAAGTTGGTTG | + |
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Preference number: 5 (lower is better) Translates to: TQIRAAPVSRQLLLRIINASMDP*NCRSWL Trigger: CAACCAACTTCTGCAGTTCAAAGGGTCCATGCTTGC...ATTTATAATCCGTAGAAGCAACTGTCTAGATACTGGGGCAGCCCTGATTTGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS-3UTR CAA 90 bp | GTGGGTGGTACTCAAGTGAAGTCAGAATACATAGATCAACAAGCACACAGCTTAACTGGCACTTCTGGCTaGCTGTTGTCCTTGGAGAAA | + |
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Preference number: 5 (lower is better) Translates to: VGGTQVKSEYIDQQAHSLTGTSG*LLSLEK Trigger: TTTCTCCAAGGACAACAGCAAGCCAGAAGTGCCAGT...TAAGCTGTGTGCTTGTTGATCTATGTATTCTGACTTCACTTGAGTACCACCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS-3UTR CAA 90 bp | ACTCAAGTGAAGTCAGAATACATAGATCAACAAGCACACAGCTTAGTTAAGTATTTAGCAGAGGTTTGCTaGCACCCACTGGCAGCGGGG | + |
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Preference number: 5 (lower is better) Translates to: TQVKSEYIDQQAHSLVKYLAEVC*HPLAAG Trigger: CCCCGCTGCCAGTGGGTGCAAGCAAACCTCTGCTAA...ATACTTAACTAAGCTGTGTGCTTGTTGATCTATGTATTCTGACTTCACTTGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS-3UTR CAA 90 bp | AATAAGGACACTGGAACAAGGTTCCTAGCTGAGAGTTTGCAACTTTCCGCTAAAAATTTGAATGCTCCTTaGTCACAGGTTACCAGGGTG | + |
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Preference number: 5 (lower is better) Translates to: NKDTGTRFLAESLQLSAKNLNAP*SQVTRV Trigger: CACCCTGGTAACCTGTGACAAAGGAGCATTCAAATT...TTTAGCGGAAAGTTGCAAACTCTCAGCTAGGAACCTTGTTCCAGTGTCCTTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS-3UTR CAA 90 bp | AAAGGTGGGTGGTACTCAAGTGAAGTCAGAATACATAGATCAACAAGCACACAGGAGGAGGGATGTAATTaGAATGCTCCTTTGTCACAG | + |
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Preference number: 5 (lower is better) Translates to: KGGWYSSEVRIHRSTSTQEEGCN*NAPLSQ Trigger: CTGTGACAAAGGAGCATTCAAATTACATCCCTCCTC...CTGTGTGCTTGTTGATCTATGTATTCTGACTTCACTTGAGTACCACCCACCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS-3UTR CAA 90 bp | GAATTAAATTATAAGTTACAGACTCAAATCAGGGCTGCCCCAGTATCTAGACAGACTTCTGGCTTGCTGTaGTCCTTGGAGAAATCTGGG | + |
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Preference number: 5 (lower is better) Translates to: ELNYKLQTQIRAAPVSRQTSGLL*SLEKSG Trigger: CCCAGATTTCTCCAAGGACAACAGCAAGCCAGAAGT...CTGTCTAGATACTGGGGCAGCCCTGATTTGAGTCTGTAACTTATAATTTAATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS-3UTR CAA 90 bp | GGGTGGTACTCAAGTGAAGTCAGAATACATAGATCAACAAGCACACAGCTTAGTGAGTTTGGCCAACCATaGAATTACTTCATCTCTCTG | + |
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Preference number: 5 (lower is better) Translates to: GWYSSEVRIHRSTSTQLSEFGQP*NYFISL Trigger: CAGAGAGATGAAGTAATTCAATGGTTGGCCAAACTC...ACTAAGCTGTGTGCTTGTTGATCTATGTATTCTGACTTCACTTGAGTACCACCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS CCA 90 bp | GTATTTGAGTTTGGCCAACCATTGAATTACTTCATCTCTCTGGGATaGAGAAACATTCTGATTTGTAGGTATTTTCGGCACATTCACCTT | + |
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Preference number: 5 (lower is better) Translates to: VFEFGQPLNYFISLG*RNILICRYFRHIHL Trigger: AAGGTGAATGTGCCGAAAATACCTACAAATCAGAATGTTTCTCCATCCCAGAGAGATGAAGTAATTCAATGGTTGGCCAAACTCAAATAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058550.15 ENSMUST00000144514.3 ENSMUST00000151568.8 |
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| CDS CCA 72 bp | GTTTGCTTGCACCCACTGGCAGCGGGGAGATGCAGGTaGAAGGCTGCTGGACCTCGGACTGGCACTTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: VCLHPLAAGRCR*KAAGPRTGTSG Trigger: GCCAGAAGTGCCAGTCCGAGGTCCAGCAGCCTTCCACCTGCATCTCCCCGCTGCCAGTGGGTGCAAGCAAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS CAA 90 bp | AGATGCAGGTGGAAGGCTGCTGGACCTCGGACTGGCACTTCTGGCTaGCTGTTGTCCTTGGAGAAATCTGGGCCTGAGACAGAGGAGGGA | + |
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Preference number: 6 (lower is better) Translates to: RCRWKAAGPRTGTSG*LLSLEKSGPETEEG Trigger: TCCCTCCTCTGTCTCAGGCCCAGATTTCTCCAAGGACAACAGCAAGCCAGAAGTGCCAGTCCGAGGTCCAGCAGCCTTCCACCTGCATCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS CAA 90 bp | TCATCCACCTCCATCTCCTCCACTTTCCGTTTAGCAGAGGTTTGCTaGCACCCACTGGCAGCGGGGAGATGCAGGTGGAAGGCTGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: SSTSISSTFRLAEVC*HPLAAGRCRWKAAG Trigger: TCCAGCAGCCTTCCACCTGCATCTCCCCGCTGCCAGTGGGTGCAAGCAAACCTCTGCTAAACGGAAAGTGGAGGAGATGGAGGTGGATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS CAA 90 bp | GAAGTCATCCACCTCCATCTCCTCCACTTTCCGTTTAGCAGAGGTTaGCTTGCACCCACTGGCAGCGGGGAGATGCAGGTGGAAGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: EVIHLHLLHFPFSRG*LAPTGSGEMQVEGC Trigger: GCAGCCTTCCACCTGCATCTCCCCGCTGCCAGTGGGTGCAAGCAAACCTCTGCTAAACGGAAAGTGGAGGAGATGGAGGTGGATGACTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS GCA 72 bp | GGAAGGCTGCTGGACCTCGGACTGGCACTTCTGGCTTaGTGTTGTCCTTGGAGAAATCTGGGCCTGAGACAG | + |
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Preference number: 6 (lower is better) Translates to: GRLLDLGLALLA*CCPWRNLGLRQ Trigger: CTGTCTCAGGCCCAGATTTCTCCAAGGACAACAGCAAGCCAGAAGTGCCAGTCCGAGGTCCAGCAGCCTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS GCA 72 bp | ACCTCCATCTCCTCCACTTTCCGTTTAGCAGAGGTTTaGTTGCACCCACTGGCAGCGGGGAGATGCAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: TSISSTFRLAEV*LHPLAAGRCRW Trigger: CCACCTGCATCTCCCCGCTGCCAGTGGGTGCAAGCAAACCTCTGCTAAACGGAAAGTGGAGGAGATGGAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS CAA 72 bp | CACCTCCATCTCCTCCACTTTCCGTTTAGCAGAGGTTaGCTTGCACCCACTGGCAGCGGGGAGATGCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: HLHLLHFPFSRG*LAPTGSGEMQV Trigger: CACCTGCATCTCCCCGCTGCCAGTGGGTGCAAGCAAACCTCTGCTAAACGGAAAGTGGAGGAGATGGAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS CAA 72 bp | TGGAAGGCTGCTGGACCTCGGACTGGCACTTCTGGCTaGCTGTTGTCCTTGGAGAAATCTGGGCCTGAGACA | + |
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Preference number: 6 (lower is better) Translates to: WKAAGPRTGTSG*LLSLEKSGPET Trigger: TGTCTCAGGCCCAGATTTCTCCAAGGACAACAGCAAGCCAGAAGTGCCAGTCCGAGGTCCAGCAGCCTTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS CAA 72 bp | TCCATCTCCTCCACTTTCCGTTTAGCAGAGGTTTGCTaGCACCCACTGGCAGCGGGGAGATGCAGGTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: SISSTFRLAEVC*HPLAAGRCRWK Trigger: CTTCCACCTGCATCTCCCCGCTGCCAGTGGGTGCAAGCAAACCTCTGCTAAACGGAAAGTGGAGGAGATGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS TCA 72 bp | GAATTTAGAGGCAGGGCAGACTGCAGAGCAGAAAGGTaGTATGCCACCAGCTCCCGACAGTGGATCAACTGG | + |
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Preference number: 6 (lower is better) Translates to: EFRGRADCRAER*YATSSRQWINW Trigger: CCAGTTGATCCACTGTCGGGAGCTGGTGGCATATCACCTTTCTGCTCTGCAGTCTGCCCTGCCTCTAAATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058550.15 ENSMUST00000201823.4 |
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| CDS GCA 72 bp | GGCTGCAAAGGTGGACAGGGGGAAGCATGGCCCTCTTaGCTTGATAAATCAGTGCCACATACAGAACCCACA | + |
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Preference number: 6 (lower is better) Translates to: GCKGGQGEAWPS*LDKSVPHTEPT Trigger: TGTGGGTTCTGTATGTGGCACTGATTTATCAAGGCAAGAGGGCCATGCTTCCCCCTGTCCACCTTTGCAGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS CAA 90 bp | AAGGCTGCTGGACCTCGGACTGGCACTTCTGGCTTGCTGTTGTCCTaGGAGAAATCTGGGCCTGAGACAGAGGAGGGATGTAATTTGAAT | + |
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Preference number: 6 (lower is better) Translates to: KAAGPRTGTSGLLLS*EKSGPETEEGCNLN Trigger: ATTCAAATTACATCCCTCCTCTGTCTCAGGCCCAGATTTCTCCAAGGACAACAGCAAGCCAGAAGTGCCAGTCCGAGGTCCAGCAGCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS CCA 72 bp | ACAGAAACAGGCTGCAAAGGTGGACAGGGGGAAGCATaGCCCTCTTGCCTTGATAAATCAGTGCCACATACA | + |
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Preference number: 6 (lower is better) Translates to: TETGCKGGQGEA*PSCLDKSVPHT Trigger: TGTATGTGGCACTGATTTATCAAGGCAAGAGGGCCATGCTTCCCCCTGTCCACCTTTGCAGCCTGTTTCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS CAA 90 bp | TTGTCCTTGGAGAAATCTGGGCCTGAGACAGAGGAGGGATGTAATTaGAATGCTCCTTTGTCACAGGTTACCAGGGTGTGCTTGAGGGGA | + |
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Preference number: 6 (lower is better) Translates to: LSLEKSGPETEEGCN*NAPLSQVTRVCLRG Trigger: TCCCCTCAAGCACACCCTGGTAACCTGTGACAAAGGAGCATTCAAATTACATCCCTCCTCTGTCTCAGGCCCAGATTTCTCCAAGGACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058550.15 |
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| CDS CCA 72 bp | CAACTGGGAGCTGTCCATAATGTGAAGAAAATCCAATaGTGTAGCCGTGTGAAGATCCCAATTCAATTTATC | + |
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Preference number: 6 (lower is better) Translates to: QLGAVHNVKKIQ*CSRVKIPIQFI Trigger: GATAAATTGAATTGGGATCTTCACACGGCTACACCATTGGATTTTCTTCACATTATGGACAGCTCCCAGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201823.4 |
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| CDS CCA 72 bp | TTTGGCCAACCATTGAATTACTTCATCTCTCTGGGATaGAGAAACATTCTGATTTGTAGGTATTTTCGGCAC | + |
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Preference number: 6 (lower is better) Translates to: FGQPLNYFISLG*RNILICRYFRH Trigger: GTGCCGAAAATACCTACAAATCAGAATGTTTCTCCATCCCAGAGAGATGAAGTAATTCAATGGTTGGCCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058550.15 ENSMUST00000144514.3 ENSMUST00000151568.8 |
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| CDS CAA 90 bp | TGTTTCTGGATAGAGGTTGAACTGGTATTTGAGTTTGGCCAACCATaGAATTACTTCATCTCTCTGGGATGGAGAAACATTCTGATTTGT | + |
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Preference number: 6 (lower is better) Translates to: CFWIEVELVFEFGQP*NYFISLGWRNILIC Trigger: ACAAATCAGAATGTTTCTCCATCCCAGAGAGATGAAGTAATTCAATGGTTGGCCAAACTCAAATACCAGTTCAACCTCTATCCAGAAACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058550.15 ENSMUST00000144514.3 ENSMUST00000151568.8 |
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| CDS CAA 72 bp | ATAGAGGTTGAACTGGTATTTGAGTTTGGCCAACCATaGAATTACTTCATCTCTCTGGGATGGAGAAACATT | + |
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Preference number: 6 (lower is better) Translates to: IEVELVFEFGQP*NYFISLGWRNI Trigger: AATGTTTCTCCATCCCAGAGAGATGAAGTAATTCAATGGTTGGCCAAACTCAAATACCAGTTCAACCTCTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058550.15 ENSMUST00000144514.3 ENSMUST00000151568.8 |
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