Pregenerated sensors for CCNG2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029385Ensembl transcript IDs: ENSMUST00000031331.13, ENSMUST00000121127.2
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTAAGGAAGCCCTTGCACACTCCCAACCTATTAAATAAAGACACCTaGAGGCTCTACAGTTTCAGACAGGCTACACTGTTCATCTTTCAA | + |
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Preference number: 1 (lower is better) Translates to: LRKPLHTPNLLNKDT*RLYSFRQATLFIFQ Trigger: TTGAAAGATGAACAGTGTAGCCTGTCTGAAACTGTAGAGCCTTCAGGTGTCTTTATTTAATAGGTTGGGAGTGTGCAAGGGCTTCCTTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| 3UTR GCA 90 bp | GAGTGTACACATCTTCATCCTTATGGCTCCATCACCACACAGAATTaGTTTAAACTAACACTACAAACACTGGAGGTCTTTCACTTCATA | + |
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Preference number: 1 (lower is better) Translates to: ECTHLHPYGSITTQN*FKLTLQTLEVFHFI Trigger: TATGAAGTGAAAGACCTCCAGTGTTTGTAGTGTTAGTTTAAAGCAATTCTGTGTGGTGATGGAGCCATAAGGATGAAGATGTGTACACTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| 3UTR-3UTR TCA 90 bp | TGCCTTCTGTCCCTGCTAAGGAAGCCCTTGCACACTCCCAACCTATTAAATAAAAGGTATTCCAGTCTGTaGAATTCCTGTCTAGACGGG | + |
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Preference number: 2 (lower is better) Translates to: CLLSLLRKPLHTPNLLNKRYSSL*NSCLDG Trigger: CCCGTCTAGACAGGAATTTCACAGACTGGAATACCT...TTTATTTAATAGGTTGGGAGTGTGCAAGGGCTTCCTTAGCAGGGACAGAAGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| 3UTR-3UTR TCA 90 bp | CAGTGTACAGAGTGTACACATCTTCATCCTTATGGCTCCATCACCACACAGAATAGGTATTCCAGTCTGTaGAATTCCTGTCTAGACGGG | + |
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Preference number: 2 (lower is better) Translates to: QCTECTHLHPYGSITTQNRYSSL*NSCLDG Trigger: CCCGTCTAGACAGGAATTTCACAGACTGGAATACCT...ATTCTGTGTGGTGATGGAGCCATAAGGATGAAGATGTGTACACTCTGTACACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| 3UTR-3UTR GCA 90 bp | CTGTCCCTGCTAAGGAAGCCCTTGCACACTCCCAACCTATTAAATAAAGACACCCACACCCCCAAGTATTaGTTTGAAATAGGTACACAC | + |
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Preference number: 2 (lower is better) Translates to: LSLLRKPLHTPNLLNKDTHTPKY*FEIGTH Trigger: GTGTGTACCTATTTCAAAGCAATACTTGGGGGTGTG...GGTGTCTTTATTTAATAGGTTGGGAGTGTGCAAGGGCTTCCTTAGCAGGGACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| 3UTR-3UTR GCA 90 bp | CTTATCAACTCCATTCCCTGTTCTGCTTTCACACAGGTGCATGCAAAGCTAGCAGACACTCAAGAGTACTaGAGTCTCTGTTCTGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: LINSIPCSAFTQVHAKLADTQEY*SLCSEN Trigger: GTTCTCAGAACAGAGACTGCAGTACTCTTGAGTGTC...TGCTAGCTTTGCATGCACCTGTGTGAAAGCAGAACAGGGAATGGAGTTGATAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| 3UTR-3UTR TCA 90 bp | CTTATCAACTCCATTCCCTGTTCTGCTTTCACACAGGTGCATGCAAAGCTAGCAATCCAAGATAAACCATaGAAGGATTGCCTTCTGTCC | + |
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Preference number: 2 (lower is better) Translates to: LINSIPCSAFTQVHAKLAIQDKP*KDCLLS Trigger: GGACAGAAGGCAATCCTTTCATGGTTTATCTTGGAT...TGCTAGCTTTGCATGCACCTGTGTGAAAGCAGAACAGGGAATGGAGTTGATAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| 3UTR-3UTR TCA 90 bp | CAGTGTACAGAGTGTACACATCTTCATCCTTATGGCTCCATCACCACACAGAATATCCAAGATAAACCATaGAAGGATTGCCTTCTGTCC | + |
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Preference number: 2 (lower is better) Translates to: QCTECTHLHPYGSITTQNIQDKP*KDCLLS Trigger: GGACAGAAGGCAATCCTTTCATGGTTTATCTTGGAT...ATTCTGTGTGGTGATGGAGCCATAAGGATGAAGATGTGTACACTCTGTACACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| 3UTR-3UTR TCA 90 bp | CAGTGTACAGAGTGTACACATCTTCATCCTTATGGCTCCATCACCACACAGAATCCCCAAGTATTGCTTTaGAATAGGTACACACACTTT | + |
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Preference number: 2 (lower is better) Translates to: QCTECTHLHPYGSITTQNPQVLL*NRYTHF Trigger: AAAGTGTGTGTACCTATTTCAAAGCAATACTTGGGG...ATTCTGTGTGGTGATGGAGCCATAAGGATGAAGATGTGTACACTCTGTACACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| 3UTR-3UTR GCA 90 bp | ACACTACAAACACTGGAGGTCTTTCACTTCATATTCACATCTTGGCACCCATATCTTGATGGCAACTTCTaGTTCAGCAGAAAGCTCAAG | + |
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Preference number: 2 (lower is better) Translates to: TLQTLEVFHFIFTSWHPYLDGNF*FSRKLK Trigger: CTTGAGCTTTCTGCTGAAGCAGAAGTTGCCATCAAG...ATATGGGTGCCAAGATGTGAATATGAAGTGAAAGACCTCCAGTGTTTGTAGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| 3UTR CAA 90 bp | TGTAGGATCTGTATCGGACAATACACCACCATTAGAAAAACAGAATaGGTGTTTGACACTCAAGAGTACTGCAGTCTCTGTTCTGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: CRICIGQYTTIRKTE*VFDTQEYCSLCSEN Trigger: GTTCTCAGAACAGAGACTGCAGTACTCTTGAGTGTCAAACACCAATTCTGTTTTTCTAATGGTGGTGTATTGTCCGATACAGATCCTACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| 3UTR-3UTR GCA 90 bp | ACACTACAAACACTGGAGGTCTTTCACTTCATATTCACATCTTGGCACCCATATCACACCCCCAAGTATTaGTTTGAAATAGGTACACAC | + |
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Preference number: 2 (lower is better) Translates to: TLQTLEVFHFIFTSWHPYHTPKY*FEIGTH Trigger: GTGTGTACCTATTTCAAAGCAATACTTGGGGGTGTG...ATATGGGTGCCAAGATGTGAATATGAAGTGAAAGACCTCCAGTGTTTGTAGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| 3UTR-3UTR TCA 90 bp | ACACTACAAACACTGGAGGTCTTTCACTTCATATTCACATCTTGGCACCCATATCCCCAAGTATTGCTTTaGAATAGGTACACACACTTT | + |
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Preference number: 2 (lower is better) Translates to: TLQTLEVFHFIFTSWHPYPQVLL*NRYTHF Trigger: AAAGTGTGTGTACCTATTTCAAAGCAATACTTGGGG...ATATGGGTGCCAAGATGTGAATATGAAGTGAAAGACCTCCAGTGTTTGTAGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| 3UTR-3UTR TCA 90 bp | GAAAACACCTCACTGGGTGTTGACTTACTAATAAAAAGTAAGTCATCAATGTCTCTAACAGTCCTAGCTTaGTGGCAACTTCTGCTTCAG | + |
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Preference number: 2 (lower is better) Translates to: ENTSLGVDLLIKSKSSMSLTVLA*WQLLLQ Trigger: CTGAAGCAGAAGTTGCCATCAAGCTAGGACTGTTAG...AGACATTGATGACTTACTTTTTATTAGTAAGTCAACACCCAGTGAGGTGTTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| 3UTR-3UTR CCA 90 bp | GAAAACACCTCACTGGGTGTTGACTTACTAATAAAAAGTAAGTCATCAATGTCTACATCTTCATCCTTATaGCTCCATCACCACACAGAA | + |
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Preference number: 2 (lower is better) Translates to: ENTSLGVDLLIKSKSSMSTSSSL*LHHHTE Trigger: TTCTGTGTGGTGATGGAGCCATAAGGATGAAGATGT...AGACATTGATGACTTACTTTTTATTAGTAAGTCAACACCCAGTGAGGTGTTTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| 3UTR-3UTR TCA 90 bp | GAAAACACCTCACTGGGTGTTGACTTACTAATAAAAAGTAAGTCATCAATGTCTTTAAATAAAGACACCTaGAGGCTCTACAGTTTCAGA | + |
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Preference number: 2 (lower is better) Translates to: ENTSLGVDLLIKSKSSMSLNKDT*RLYSFR Trigger: TCTGAAACTGTAGAGCCTTCAGGTGTCTTTATTTAA...AGACATTGATGACTTACTTTTTATTAGTAAGTCAACACCCAGTGAGGTGTTTTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| 3UTR-3UTR CAA 90 bp | TTGACACTCAAGAGTACTGCAGTCTCTGTTCTGAGAACAAGGGAGAAGGAAATCCTGCTAAGGAAGCCCTaGCACACTCCCAACCTATTA | + |
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Preference number: 3 (lower is better) Translates to: LTLKSTAVSVLRTREKEILLRKP*HTPNLL Trigger: TAATAGGTTGGGAGTGTGCAAGGGCTTCCTTAGCAG...GATTTCCTTCTCCCTTGTTCTCAGAACAGAGACTGCAGTACTCTTGAGTGTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| 3UTR TCA 72 bp | CCCTTGCACACTCCCAACCTATTAAATAAAGACACCTaGAGGCTCTACAGTTTCAGACAGGCTACACTGTTC | + |
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Preference number: 3 (lower is better) Translates to: PLHTPNLLNKDT*RLYSFRQATLF Trigger: GAACAGTGTAGCCTGTCTGAAACTGTAGAGCCTTCAGGTGTCTTTATTTAATAGGTTGGGAGTGTGCAAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| 3UTR CCA 72 bp | GTATCGGACAATACACCACCATTAGAAAAACAGAATTaGTGTTTGACACTCAAGAGTACTGCAGTCTCTGTT | + |
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Preference number: 3 (lower is better) Translates to: VSDNTPPLEKQN*CLTLKSTAVSV Trigger: AACAGAGACTGCAGTACTCTTGAGTGTCAAACACCAATTCTGTTTTTCTAATGGTGGTGTATTGTCCGATAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| 3UTR-3UTR CAA 90 bp | TTTAAACTAACACTACAAACACTGGAGGTCTTTCACTTCATATTCACATCTTGGAAACAGAATTGGTGTTaGACACTCAAGAGTACTGCA | + |
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Preference number: 3 (lower is better) Translates to: FKLTLQTLEVFHFIFTSWKQNWC*TLKSTA Trigger: TGCAGTACTCTTGAGTGTCAAACACCAATTCTGTTT...CCAAGATGTGAATATGAAGTGAAAGACCTCCAGTGTTTGTAGTGTTAGTTTAAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| 3UTR-3UTR CAA 90 bp | GAAAACACCTCACTGGGTGTTGACTTACTAATAAAAAGTAAGTCATCAATGTCTAAACAGAATTGGTGTTaGACACTCAAGAGTACTGCA | + |
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Preference number: 3 (lower is better) Translates to: ENTSLGVDLLIKSKSSMSKQNWC*TLKSTA Trigger: TGCAGTACTCTTGAGTGTCAAACACCAATTCTGTTT...AGACATTGATGACTTACTTTTTATTAGTAAGTCAACACCCAGTGAGGTGTTTTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS-3UTR TCA 90 bp | CTTATCAACTCCATTCCCTGTTCTGCTTTCACACAGGTGCATGCAAAGCTAGCAAAGAAGGTGCACTCCTaGTCGCTGGGTGGGGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: LINSIPCSAFTQVHAKLAKKVHS*SLGGEL Trigger: CAGCTCCCCACCCAGCGATCAGGAGTGCACCTTCTT...TGCTAGCTTTGCATGCACCTGTGTGAAAGCAGAACAGGGAATGGAGTTGATAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS-3UTR GCA 90 bp | CAAAGGCCTGAAAGGAATGAAGGAATCAGCACCTTCCCTCCTCCCCAAGATAAATCGCCACCTGCCAAGTaGTTGGCCCCCAAATCCTTC | + |
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Preference number: 4 (lower is better) Translates to: QRPERNEGISTFPPPQDKSPPAK*LAPKSF Trigger: GAAGGATTTGGGGGCCAAGCACTTGGCAGGTGGCGA...TTTATCTTGGGGAGGAGGGAAGGTGCTGATTCCTTCATTCCTTTCAGGCCTTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS-3UTR CCA 90 bp | TGCCTTCTGTCCCTGCTAAGGAAGCCCTTGCACACTCCCAACCTATTAAATAAACTCCTGATCGCTGGGTaGGGAGCTGCTGAGACTCTC | + |
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Preference number: 4 (lower is better) Translates to: CLLSLLRKPLHTPNLLNKLLIAG*GAAETL Trigger: GAGAGTCTCAGCAGCTCCCCACCCAGCGATCAGGAG...TTTATTTAATAGGTTGGGAGTGTGCAAGGGCTTCCTTAGCAGGGACAGAAGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS-3UTR CCA 90 bp | CTTATCAACTCCATTCCCTGTTCTGCTTTCACACAGGTGCATGCAAAGCTAGCACTCCTGATCGCTGGGTaGGGAGCTGCTGAGACTCTC | + |
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Preference number: 4 (lower is better) Translates to: LINSIPCSAFTQVHAKLALLIAG*GAAETL Trigger: GAGAGTCTCAGCAGCTCCCCACCCAGCGATCAGGAG...TGCTAGCTTTGCATGCACCTGTGTGAAAGCAGAACAGGGAATGGAGTTGATAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS-3UTR GCA 90 bp | CAGTGTACAGAGTGTACACATCTTCATCCTTATGGCTCCATCACCACACAGAATTCGCCACCTGCCAAGTaGTTGGCCCCCAAATCCTTC | + |
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Preference number: 4 (lower is better) Translates to: QCTECTHLHPYGSITTQNSPPAK*LAPKSF Trigger: GAAGGATTTGGGGGCCAAGCACTTGGCAGGTGGCGA...ATTCTGTGTGGTGATGGAGCCATAAGGATGAAGATGTGTACACTCTGTACACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS-3UTR TCA 90 bp | CAAAGGCCTGAAAGGAATGAAGGAATCAGCACCTTCCCTCCTCCCCAAGATAAAGGAAAGCACAGTGTCTaGGCCACTTGGAAGTCAAAG | + |
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Preference number: 4 (lower is better) Translates to: QRPERNEGISTFPPPQDKGKHSV*ATWKSK Trigger: CTTTGACTTCCAAGTGGCTCAGACACTGTGCTTTCC...TTTATCTTGGGGAGGAGGGAAGGTGCTGATTCCTTCATTCCTTTCAGGCCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS-3UTR GCA 90 bp | CTTATCAACTCCATTCCCTGTTCTGCTTTCACACAGGTGCATGCAAAGCTAGCAGAACACTGTAGTAGCTaGTGTGGAGGTTCTGCGCAG | + |
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Preference number: 4 (lower is better) Translates to: LINSIPCSAFTQVHAKLAEHCSS*CGGSAQ Trigger: CTGCGCAGAACCTCCACAGCAGCTACTACAGTGTTC...TGCTAGCTTTGCATGCACCTGTGTGAAAGCAGAACAGGGAATGGAGTTGATAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS-3UTR TCA 90 bp | TGCCTTCTGTCCCTGCTAAGGAAGCCCTTGCACACTCCCAACCTATTAAATAAAGGAAAGCACAGTGTCTaGGCCACTTGGAAGTCAAAG | + |
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Preference number: 4 (lower is better) Translates to: CLLSLLRKPLHTPNLLNKGKHSV*ATWKSK Trigger: CTTTGACTTCCAAGTGGCTCAGACACTGTGCTTTCC...TTTATTTAATAGGTTGGGAGTGTGCAAGGGCTTCCTTAGCAGGGACAGAAGGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS-3UTR GCA 90 bp | TGCCTTCTGTCCCTGCTAAGGAAGCCCTTGCACACTCCCAACCTATTAAATAAAAGACAACTCGGCAGTTaGAAGCTTTCAGCTGCGCTT | + |
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Preference number: 4 (lower is better) Translates to: CLLSLLRKPLHTPNLLNKRQLGS*KLSAAL Trigger: AAGCGCAGCTGAAAGCTTGCAACTGCCGAGTTGTCT...TTTATTTAATAGGTTGGGAGTGTGCAAGGGCTTCCTTAGCAGGGACAGAAGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS-3UTR GCA 90 bp | CTTATCAACTCCATTCCCTGTTCTGCTTTCACACAGGTGCATGCAAAGCTAGCAAGTCAAAGAAGAAGGTaGACTCCTGATCGCTGGGTG | + |
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Preference number: 4 (lower is better) Translates to: LINSIPCSAFTQVHAKLASQRRR*TPDRWV Trigger: CACCCAGCGATCAGGAGTGCACCTTCTTCTTTGACT...TGCTAGCTTTGCATGCACCTGTGTGAAAGCAGAACAGGGAATGGAGTTGATAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS-3UTR TCA 90 bp | TTGACACTCAAGAGTACTGCAGTCTCTGTTCTGAGAACAAGGGAGAAGGAAATCTGCATTTACACTGACTaGTGCGGATCACATCGTGCG | + |
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Preference number: 4 (lower is better) Translates to: LTLKSTAVSVLRTREKEICIYTD*CGSHRA Trigger: CGCACGATGTGATCCGCATCAGTCAGTGTAAATGCA...GATTTCCTTCTCCCTTGTTCTCAGAACAGAGACTGCAGTACTCTTGAGTGTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS-3UTR TCA 90 bp | CAGTGTACAGAGTGTACACATCTTCATCCTTATGGCTCCATCACCACACAGAATGCTGTGCATTTACACTaGCTGATGCGGATCACATCG | + |
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Preference number: 4 (lower is better) Translates to: QCTECTHLHPYGSITTQNAVHLH*LMRITS Trigger: CGATGTGATCCGCATCAGTCAGTGTAAATGCACAGC...ATTCTGTGTGGTGATGGAGCCATAAGGATGAAGATGTGTACACTCTGTACACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS-3UTR GCA 90 bp | TTGACACTCAAGAGTACTGCAGTCTCTGTTCTGAGAACAAGGGAGAAGGAAATCTCTTCAGATCAGGCTTaGAGCAGCGAGGCGAAGAAT | + |
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Preference number: 4 (lower is better) Translates to: LTLKSTAVSVLRTREKEISSDQA*SSEAKN Trigger: ATTCTTCGCCTCGCTGCTGCAAGCCTGATCTGAAGA...GATTTCCTTCTCCCTTGTTCTCAGAACAGAGACTGCAGTACTCTTGAGTGTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS-3UTR GCA 90 bp | GGATCTGTATCGGACAATACACCACCATTAGAAAAACAGAATTGGTGTTTGACACTGCTGTGGAGGTTCTaGGCAGTGCGTCGCGAAACA | + |
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Preference number: 4 (lower is better) Translates to: GSVSDNTPPLEKQNWCLTLLWRF*AVRRET Trigger: TGTTTCGCGACGCACTGCGCAGAACCTCCACAGCAG...TGTCAAACACCAATTCTGTTTTTCTAATGGTGGTGTATTGTCCGATACAGATCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS-3UTR GCA 90 bp | GGACAATACACCACCATTAGAAAAACAGAATTGGTGTTTGACACTCAAGAGTACCTGCTGTGGAGGTTCTaGGCAGTGCGTCGCGAAACA | + |
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Preference number: 4 (lower is better) Translates to: GQYTTIRKTELVFDTQEYLLWRF*AVRRET Trigger: TGTTTCGCGACGCACTGCGCAGAACCTCCACAGCAG...GTACTCTTGAGTGTCAAACACCAATTCTGTTTTTCTAATGGTGGTGTATTGTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS-3UTR GCA 90 bp | CAGTGTACAGAGTGTACACATCTTCATCCTTATGGCTCCATCACCACACAGAATAGTCAAAGAAGAAGGTaGACTCCTGATCGCTGGGTG | + |
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Preference number: 4 (lower is better) Translates to: QCTECTHLHPYGSITTQNSQRRR*TPDRWV Trigger: CACCCAGCGATCAGGAGTGCACCTTCTTCTTTGACT...ATTCTGTGTGGTGATGGAGCCATAAGGATGAAGATGTGTACACTCTGTACACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS-3UTR TCA 90 bp | CTGTCCCTGCTAAGGAAGCCCTTGCACACTCCCAACCTATTAAATAAAGACACCTTCCTTTCTGAAGTGTaGCAAAATACAATCGCGTGG | + |
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Preference number: 4 (lower is better) Translates to: LSLLRKPLHTPNLLNKDTFLSEV*QNTIAW Trigger: CCACGCGATTGTATTTTGTCACACTTCAGAAAGGAA...GGTGTCTTTATTTAATAGGTTGGGAGTGTGCAAGGGCTTCCTTAGCAGGGACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS-3UTR TCA 90 bp | TTTAAACTAACACTACAAACACTGGAGGTCTTTCACTTCATATTCACATCTTGGAAGAAGGTGCACTCCTaGTCGCTGGGTGGGGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: FKLTLQTLEVFHFIFTSWKKVHS*SLGGEL Trigger: CAGCTCCCCACCCAGCGATCAGGAGTGCACCTTCTT...CCAAGATGTGAATATGAAGTGAAAGACCTCCAGTGTTTGTAGTGTTAGTTTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS-3UTR GCA 90 bp | ACACTACAAACACTGGAGGTCTTTCACTTCATATTCACATCTTGGCACCCATATGAACACTGTAGTAGCTaGTGTGGAGGTTCTGCGCAG | + |
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Preference number: 4 (lower is better) Translates to: TLQTLEVFHFIFTSWHPYEHCSS*CGGSAQ Trigger: CTGCGCAGAACCTCCACAGCAGCTACTACAGTGTTC...ATATGGGTGCCAAGATGTGAATATGAAGTGAAAGACCTCCAGTGTTTGTAGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS-3UTR TCA 90 bp | GGATCTGTATCGGACAATACACCACCATTAGAAAAACAGAATTGGTGTTTGACAGCTGTGCATTTACACTaGCTGATGCGGATCACATCG | + |
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Preference number: 4 (lower is better) Translates to: GSVSDNTPPLEKQNWCLTAVHLH*LMRITS Trigger: CGATGTGATCCGCATCAGTCAGTGTAAATGCACAGC...TGTCAAACACCAATTCTGTTTTTCTAATGGTGGTGTATTGTCCGATACAGATCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS-3UTR GCA 90 bp | GGATCTGTATCGGACAATACACCACCATTAGAAAAACAGAATTGGTGTTTGACATTGCAAGCTTTCAGCTaGGCTTCGAGTTTATCGAGG | + |
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Preference number: 4 (lower is better) Translates to: GSVSDNTPPLEKQNWCLTLQAFS*ASSLSR Trigger: CCTCGATAAACTCGAAGCGCAGCTGAAAGCTTGCAA...TGTCAAACACCAATTCTGTTTTTCTAATGGTGGTGTATTGTCCGATACAGATCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS-3UTR TCA 90 bp | TTTAAACTAACACTACAAACACTGGAGGTCTTTCACTTCATATTCACATCTTGGTGCATTTACACTGACTaGTGCGGATCACATCGTGCG | + |
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Preference number: 4 (lower is better) Translates to: FKLTLQTLEVFHFIFTSWCIYTD*CGSHRA Trigger: CGCACGATGTGATCCGCATCAGTCAGTGTAAATGCA...CCAAGATGTGAATATGAAGTGAAAGACCTCCAGTGTTTGTAGTGTTAGTTTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS-3UTR GCA 90 bp | GAAAACACCTCACTGGGTGTTGACTTACTAATAAAAAGTAAGTCATCAATGTCTTCTTCAGATCAGGCTTaGAGCAGCGAGGCGAAGAAT | + |
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Preference number: 4 (lower is better) Translates to: ENTSLGVDLLIKSKSSMSSSDQA*SSEAKN Trigger: ATTCTTCGCCTCGCTGCTGCAAGCCTGATCTGAAGA...AGACATTGATGACTTACTTTTTATTAGTAAGTCAACACCCAGTGAGGTGTTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS-3UTR CCA 90 bp | TGCCTTCTGTCCCTGCTAAGGAAGCCCTTGCACACTCCCAACCTATTAAATAAATTAAATCTTCCACTTTaGCATTTCTCAGTCTTGAAC | + |
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Preference number: 4 (lower is better) Translates to: CLLSLLRKPLHTPNLLNKLNLPL*HFSVLN Trigger: GTTCAAGACTGAGAAATGCCAAAGTGGAAGATTTAA...TTTATTTAATAGGTTGGGAGTGTGCAAGGGCTTCCTTAGCAGGGACAGAAGGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS-3UTR GCA 90 bp | GGACAATACACCACCATTAGAAAAACAGAATTGGTGTTTGACACTCAAGAGTACATCGCGTGGTACAAGTaGAAAAAGTTTAAGGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: GQYTTIRKTELVFDTQEYIAWYK*KKFKAV Trigger: CACTGCCTTAAACTTTTTGCACTTGTACCACGCGAT...GTACTCTTGAGTGTCAAACACCAATTCTGTTTTTCTAATGGTGGTGTATTGTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS-3UTR CCA 90 bp | CAGTGTACAGAGTGTACACATCTTCATCCTTATGGCTCCATCACCACACAGAATTTAAATCTTCCACTTTaGCATTTCTCAGTCTTGAAC | + |
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Preference number: 4 (lower is better) Translates to: QCTECTHLHPYGSITTQNLNLPL*HFSVLN Trigger: GTTCAAGACTGAGAAATGCCAAAGTGGAAGATTTAA...ATTCTGTGTGGTGATGGAGCCATAAGGATGAAGATGTGTACACTCTGTACACTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| 3UTR CAA 72 bp | TACTTAGGTATTAAGAATGCAACTAACAGTCCTAGCTaGATGGCAACTTCTGCTTCAGCAGAAAGCTCAAGA | + |
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Preference number: 4 (lower is better) Translates to: YLGIKNATNSPS*MATSASAESSR Trigger: TCTTGAGCTTTCTGCTGAAGCAGAAGTTGCCATCAAGCTAGGACTGTTAGTTGCATTCTTAATACCTAAGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS-3UTR TCA 90 bp | TTTAAACTAACACTACAAACACTGGAGGTCTTTCACTTCATATTCACATCTTGGATAGTGCAGTTTCTCTaGGATGATTTTCTCCATGCG | + |
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Preference number: 4 (lower is better) Translates to: FKLTLQTLEVFHFIFTSWIVQFL*DDFLHA Trigger: CGCATGGAGAAAATCATCTCAGAGAAACTGCACTAT...CCAAGATGTGAATATGAAGTGAAAGACCTCCAGTGTTTGTAGTGTTAGTTTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS-3UTR GCA 90 bp | TTTAAACTAACACTACAAACACTGGAGGTCTTTCACTTCATATTCACATCTTGGATCGCGTGGTACAAGTaGAAAAAGTTTAAGGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: FKLTLQTLEVFHFIFTSWIAWYK*KKFKAV Trigger: CACTGCCTTAAACTTTTTGCACTTGTACCACGCGAT...CCAAGATGTGAATATGAAGTGAAAGACCTCCAGTGTTTGTAGTGTTAGTTTAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS GCA 90 bp | GCAGCTCAGGAACACTGTAGTAGCTGCTGTGGAGGTTCTGCGCAGTaGGTCGCGAAACAATCCATACCAGCTTCTTCAGATCAGGCTTGC | + |
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Preference number: 5 (lower is better) Translates to: AAQEHCSSCCGGSAQ*VAKQSIPASSDQAC Trigger: GCAAGCCTGATCTGAAGAAGCTGGTATGGATTGTTTCGCGACGCACTGCGCAGAACCTCCACAGCAGCTACTACAGTGTTCCTGAGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS GCA 90 bp | GGTCTTGCTTTGGAGAAGACAACTCGGCAGTTGCAAGCTTTCAGCTaGGCTTCGAGTTTATCGAGGCTGAGAATCTCCTTCCTTTCTGAA | + |
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Preference number: 5 (lower is better) Translates to: GLALEKTTRQLQAFS*ASSLSRLRISFLSE Trigger: TTCAGAAAGGAAGGAGATTCTCAGCCTCGATAAACTCGAAGCGCAGCTGAAAGCTTGCAACTGCCGAGTTGTCTTCTCCAAAGCAAGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS-3UTR CAA 90 bp | TGCCTTCTGTCCCTGCTAAGGAAGCCCTTGCACACTCCCAACCTATTAAATAAAAAGACAACTCGGCAGTaGCAAGCTTTCAGCTGCGCT | + |
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Preference number: 5 (lower is better) Translates to: CLLSLLRKPLHTPNLLNKKTTRQ*QAFSCA Trigger: AGCGCAGCTGAAAGCTTGCAACTGCCGAGTTGTCTT...TTTATTTAATAGGTTGGGAGTGTGCAAGGGCTTCCTTAGCAGGGACAGAAGGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS-3UTR CAA 90 bp | CAAAGGCCTGAAAGGAATGAAGGAATCAGCACCTTCCCTCCTCCCCAAGATAAACAGTGTCTGAGCCACTaGGAAGTCAAAGAAGAAGGT | + |
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Preference number: 5 (lower is better) Translates to: QRPERNEGISTFPPPQDKQCLSH*EVKEEG Trigger: ACCTTCTTCTTTGACTTCCAAGTGGCTCAGACACTG...TTTATCTTGGGGAGGAGGGAAGGTGCTGATTCCTTCATTCCTTTCAGGCCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS-3UTR CAA 90 bp | TTGACACTCAAGAGTACTGCAGTCTCTGTTCTGAGAACAAGGGAGAAGGAAATCACAGATGGTCTTGCTTaGGAGAAGACAACTCGGCAG | + |
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Preference number: 5 (lower is better) Translates to: LTLKSTAVSVLRTREKEITDGLA*EKTTRQ Trigger: CTGCCGAGTTGTCTTCTCCAAAGCAAGACCATCTGT...GATTTCCTTCTCCCTTGTTCTCAGAACAGAGACTGCAGTACTCTTGAGTGTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS-3UTR CAA 90 bp | TTGACACTCAAGAGTACTGCAGTCTCTGTTCTGAGAACAAGGGAGAAGGAAATCCAGTGTCTGAGCCACTaGGAAGTCAAAGAAGAAGGT | + |
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Preference number: 5 (lower is better) Translates to: LTLKSTAVSVLRTREKEIQCLSH*EVKEEG Trigger: ACCTTCTTCTTTGACTTCCAAGTGGCTCAGACACTG...GATTTCCTTCTCCCTTGTTCTCAGAACAGAGACTGCAGTACTCTTGAGTGTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS TCA 90 bp | CAGCTGCGCTTCGAGTTTATCGAGGCTGAGAATCTCCTTCCTTTCTaGAGTGTGACAAAATACAATCGCGTGGTACAAGTGCAAAAAGTT | + |
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Preference number: 5 (lower is better) Translates to: QLRFEFIEAENLLPF*SVTKYNRVVQVQKV Trigger: AACTTTTTGCACTTGTACCACGCGATTGTATTTTGTCACACTTCAGAAAGGAAGGAGATTCTCAGCCTCGATAAACTCGAAGCGCAGCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS-3UTR CAA 90 bp | ACACTACAAACACTGGAGGTCTTTCACTTCATATTCACATCTTGGCACCCATATACAGATGGTCTTGCTTaGGAGAAGACAACTCGGCAG | + |
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Preference number: 5 (lower is better) Translates to: TLQTLEVFHFIFTSWHPYTDGLA*EKTTRQ Trigger: CTGCCGAGTTGTCTTCTCCAAAGCAAGACCATCTGT...ATATGGGTGCCAAGATGTGAATATGAAGTGAAAGACCTCCAGTGTTTGTAGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS-3UTR CAA 90 bp | CTGTCCCTGCTAAGGAAGCCCTTGCACACTCCCAACCTATTAAATAAAGACACCTGGCATTTCTCAGTCTaGAACACAAAGTGTTATCAT | + |
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Preference number: 5 (lower is better) Translates to: LSLLRKPLHTPNLLNKDTWHFSV*NTKCYH Trigger: ATGATAACACTTTGTGTTCAAGACTGAGAAATGCCA...GGTGTCTTTATTTAATAGGTTGGGAGTGTGCAAGGGCTTCCTTAGCAGGGACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS-3UTR CAA 90 bp | CTGTCCCTGCTAAGGAAGCCCTTGCACACTCCCAACCTATTAAATAAAGACACCGTTTCTATTTCCAAATaGAGAAGGCACAGAGCTAAT | + |
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Preference number: 5 (lower is better) Translates to: LSLLRKPLHTPNLLNKDTVSISK*RRHRAN Trigger: ATTAGCTCTGTGCCTTCTCAATTTGGAAATAGAAAC...GGTGTCTTTATTTAATAGGTTGGGAGTGTGCAAGGGCTTCCTTAGCAGGGACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS-3UTR CAA 90 bp | CTTATCAACTCCATTCCCTGTTCTGCTTTCACACAGGTGCATGCAAAGCTAGCACTTAAATCTTCCACTTaGGCATTTCTCAGTCTTGAA | + |
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Preference number: 5 (lower is better) Translates to: LINSIPCSAFTQVHAKLALKSST*AFLSLE Trigger: TTCAAGACTGAGAAATGCCAAAGTGGAAGATTTAAG...TGCTAGCTTTGCATGCACCTGTGTGAAAGCAGAACAGGGAATGGAGTTGATAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS-3UTR CAA 90 bp | TTTAAACTAACACTACAAACACTGGAGGTCTTTCACTTCATATTCACATCTTGGAAGACAACTCGGCAGTaGCAAGCTTTCAGCTGCGCT | + |
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Preference number: 5 (lower is better) Translates to: FKLTLQTLEVFHFIFTSWKTTRQ*QAFSCA Trigger: AGCGCAGCTGAAAGCTTGCAACTGCCGAGTTGTCTT...CCAAGATGTGAATATGAAGTGAAAGACCTCCAGTGTTTGTAGTGTTAGTTTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS-3UTR CAA 90 bp | ACACTACAAACACTGGAGGTCTTTCACTTCATATTCACATCTTGGCACCCATATTTGGTATCTCTGTTCTaGTTCCAGGTAGAAGTTCAA | + |
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Preference number: 5 (lower is better) Translates to: TLQTLEVFHFIFTSWHPYLVSLF*FQVEVQ Trigger: TTGAACTTCTACCTGGAACAAGAACAGAGATACCAA...ATATGGGTGCCAAGATGTGAATATGAAGTGAAAGACCTCCAGTGTTTGTAGTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS-3UTR CAA 90 bp | ACACTACAAACACTGGAGGTCTTTCACTTCATATTCACATCTTGGCACCCATATGTTTCTATTTCCAAATaGAGAAGGCACAGAGCTAAT | + |
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Preference number: 5 (lower is better) Translates to: TLQTLEVFHFIFTSWHPYVSISK*RRHRAN Trigger: ATTAGCTCTGTGCCTTCTCAATTTGGAAATAGAAAC...ATATGGGTGCCAAGATGTGAATATGAAGTGAAAGACCTCCAGTGTTTGTAGTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS-3UTR CAA 90 bp | GGACAATACACCACCATTAGAAAAACAGAATTGGTGTTTGACACTCAAGAGTACTGGCATTTCTCAGTCTaGAACACAAAGTGTTATCAT | + |
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Preference number: 5 (lower is better) Translates to: GQYTTIRKTELVFDTQEYWHFSV*NTKCYH Trigger: ATGATAACACTTTGTGTTCAAGACTGAGAAATGCCA...GTACTCTTGAGTGTCAAACACCAATTCTGTTTTTCTAATGGTGGTGTATTGTCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS-3UTR CAA 90 bp | GAAAACACCTCACTGGGTGTTGACTTACTAATAAAAAGTAAGTCATCAATGTCTTTGGTATCTCTGTTCTaGTTCCAGGTAGAAGTTCAA | + |
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Preference number: 5 (lower is better) Translates to: ENTSLGVDLLIKSKSSMSLVSLF*FQVEVQ Trigger: TTGAACTTCTACCTGGAACAAGAACAGAGATACCAA...AGACATTGATGACTTACTTTTTATTAGTAAGTCAACACCCAGTGAGGTGTTTTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS GCA 72 bp | GAACACTGTAGTAGCTGCTGTGGAGGTTCTGCGCAGTaGGTCGCGAAACAATCCATACCAGCTTCTTCAGAT | + |
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Preference number: 6 (lower is better) Translates to: EHCSSCCGGSAQ*VAKQSIPASSD Trigger: ATCTGAAGAAGCTGGTATGGATTGTTTCGCGACGCACTGCGCAGAACCTCCACAGCAGCTACTACAGTGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS CAA 90 bp | GCAGTGCGTCGCGAAACAATCCATACCAGCTTCTTCAGATCAGGCTaGCAGCAGCGAGGCGAAGAATACTCTGCTAGACATTTAGAAACC | + |
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Preference number: 6 (lower is better) Translates to: AVRRETIHTSFFRSG*QQRGEEYSARHLET Trigger: GGTTTCTAAATGTCTAGCAGAGTATTCTTCGCCTCGCTGCTGCAAGCCTGATCTGAAGAAGCTGGTATGGATTGTTTCGCGACGCACTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS GCA 72 bp | TTGGAGAAGACAACTCGGCAGTTGCAAGCTTTCAGCTaGGCTTCGAGTTTATCGAGGCTGAGAATCTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: LEKTTRQLQAFS*ASSLSRLRISF Trigger: GAAGGAGATTCTCAGCCTCGATAAACTCGAAGCGCAGCTGAAAGCTTGCAACTGCCGAGTTGTCTTCTCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS CAA 72 bp | ACAGATGGTCTTGCTTTGGAGAAGACAACTCGGCAGTaGCAAGCTTTCAGCTGCGCTTCGAGTTTATCGAGG | + |
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Preference number: 6 (lower is better) Translates to: TDGLALEKTTRQ*QAFSCASSLSR Trigger: CCTCGATAAACTCGAAGCGCAGCTGAAAGCTTGCAACTGCCGAGTTGTCTTCTCCAAAGCAAGACCATCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS CAA 72 bp | CGCGAAACAATCCATACCAGCTTCTTCAGATCAGGCTaGCAGCAGCGAGGCGAAGAATACTCTGCTAGACAT | + |
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Preference number: 6 (lower is better) Translates to: RETIHTSFFRSG*QQRGEEYSARH Trigger: ATGTCTAGCAGAGTATTCTTCGCCTCGCTGCTGCAAGCCTGATCTGAAGAAGCTGGTATGGATTGTTTCGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS GCA 72 bp | GCGAAACAATCCATACCAGCTTCTTCAGATCAGGCTTaGAGCAGCGAGGCGAAGAATACTCTGCTAGACATT | + |
|
Preference number: 6 (lower is better) Translates to: AKQSIPASSDQA*SSEAKNTLLDI Trigger: AATGTCTAGCAGAGTATTCTTCGCCTCGCTGCTGCAAGCCTGATCTGAAGAAGCTGGTATGGATTGTTTCGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS CAA 90 bp | ATTCTCCGGGGTAGCCTCCATCAAGATCAGCCCTTTTTCCCGAGGTaGGTATCTCTGTTCTTGTTCCAGGTAGAAGTTCAACAATCCGAA | + |
|
Preference number: 6 (lower is better) Translates to: ILRGSLHQDQPFFPR*VSLFLFQVEVQQSE Trigger: TTCGGATTGTTGAACTTCTACCTGGAACAAGAACAGAGATACCAACCTCGGGAAAAAGGGCTGATCTTGATGGAGGCTACCCCGGAGAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS TCA 72 bp | GGCAGTGGTAGCTTCCAGCTCATAGTGCAGTTTCTCTaGGATGATTTTCTCCATGCGTTTAATGTCAGACGC | + |
|
Preference number: 6 (lower is better) Translates to: GSGSFQLIVQFL*DDFLHAFNVRR Trigger: GCGTCTGACATTAAACGCATGGAGAAAATCATCTCAGAGAAACTGCACTATGAGCTGGAAGCTACCACTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS TCA 72 bp | TGCAAGCTTTCAGCTGCGCTTCGAGTTTATCGAGGCTaGGAATCTCCTTCCTTTCTGAAGTGTGACAAAATA | + |
|
Preference number: 6 (lower is better) Translates to: CKLSAALRVYRG*ESPSFLKCDKI Trigger: TATTTTGTCACACTTCAGAAAGGAAGGAGATTCTCAGCCTCGATAAACTCGAAGCGCAGCTGAAAGCTTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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| CDS TCA 72 bp | TTCGAGTTTATCGAGGCTGAGAATCTCCTTCCTTTCTaGAGTGTGACAAAATACAATCGCGTGGTACAAGTG | + |
|
Preference number: 6 (lower is better) Translates to: FEFIEAENLLPF*SVTKYNRVVQV Trigger: CACTTGTACCACGCGATTGTATTTTGTCACACTTCAGAAAGGAAGGAGATTCTCAGCCTCGATAAACTCGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031331.13 ENSMUST00000121127.2 |
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