Pregenerated sensors for CCNF (Mus musculus)
Ensembl gene IDs: ENSMUSG00000072082Ensembl transcript IDs: ENSMUST00000115390.5, ENSMUST00000234541.2
Found 208 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGATGAACCGGGTACAGATGACCATGCAGGCAATACCCAGGAGCTaGAGCTTGTATCTGGGGACCAGCCTCCTTCGCAGGTACCGGTCT | + |
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Preference number: 1 (lower is better) Translates to: LMNRVQMTMQAIPRS*SLYLGTSLLRRYRS Trigger: AGACCGGTACCTGCGAAGGAGGCTGGTCCCCAGATACAAGCTGCAGCTCCTGGGTATTGCCTGCATGGTCATCTGTACCCGGTTCATCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234541.2 |
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| 3UTR TCA 90 bp | GCCGCTAGTATTCCAAGGAGGCTGTCAGCTCCTGGCCTCAGAAAGTaGATGCCAACACAGAGGCTCATGCTCCCGGAGACAACAGGACAC | + |
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Preference number: 1 (lower is better) Translates to: AASIPRRLSAPGLRK*MPTQRLMLPETTGH Trigger: GTGTCCTGTTGTCTCCGGGAGCATGAGCCTCTGTGTTGGCATTCACTTTCTGAGGCCAGGAGCTGACAGCCTCCTTGGAATACTAGCGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| 3UTR TCA 90 bp | AGGCTACAGTCAACACTGATATGCAGGGACACAGGCTCCCTAGGCTaGAGGGGTGTGGGAGGAGAGTGCTGTCTTCACTTGAGAGCTCCC | + |
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Preference number: 1 (lower is better) Translates to: RLQSTLICRDTGSLG*RGVGGECCLHLRAP Trigger: GGGAGCTCTCAAGTGAAGACAGCACTCTCCTCCCACACCCCTTCAGCCTAGGGAGCCTGTGTCCCTGCATATCAGTGTTGACTGTAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| 3UTR TCA 90 bp | AGGGGTCAGCATATCTGCGCAGGCTTCAGCAGACACCCCAGGTGTTaGGGACAGCTGCCTCATAAATCACAAGGCAAAGCATTCGCTGAC | + |
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Preference number: 1 (lower is better) Translates to: RGQHICAGFSRHPRC*GQLPHKSQGKAFAD Trigger: GTCAGCGAATGCTTTGCCTTGTGATTTATGAGGCAGCTGTCCTCAACACCTGGGGTGTCTGCTGAAGCCTGCGCAGATATGCTGACCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| 3UTR TCA 90 bp | CTGGTTTCTCCCCACGGAATCCAGCCACAAACCCAGCAACTCTTCTaGCTTCTCGCTCTCCTGCATCTTTGTGGCCTTGGGGATTACAAG | + |
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Preference number: 1 (lower is better) Translates to: LVSPHGIQPQTQQLF*LLALLHLCGLGDYK Trigger: CTTGTAATCCCCAAGGCCACAAAGATGCAGGAGAGCGAGAAGTCAGAAGAGTTGCTGGGTTTGTGGCTGGATTCCGTGGGGAGAAACCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| 3UTR TCA 90 bp | ACCAGCCTCCTTCGCAGGTACCGGTCTACACACTCCACAGTCAGGTaGAGACACAGGCTTGTAAAGTCCTTCATTGTGGCAACTTCCACC | + |
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Preference number: 1 (lower is better) Translates to: TSLLRRYRSTHSTVR*RHRLVKSFIVATST Trigger: GGTGGAAGTTGCCACAATGAAGGACTTTACAAGCCTGTGTCTTCACCTGACTGTGGAGTGTGTAGACCGGTACCTGCGAAGGAGGCTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234541.2 |
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| 3UTR GCA 90 bp | CTAGTATTCCAAGGAGGCTGTCAGCTCCTGGCCTCAGAAAGTGAATaGCAACACAGAGGCTCATGCTCCCGGAGACAACAGGACACAGAA | + |
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Preference number: 1 (lower is better) Translates to: LVFQGGCQLLASESE*QHRGSCSRRQQDTE Trigger: TTCTGTGTCCTGTTGTCTCCGGGAGCATGAGCCTCTGTGTTGGCATTCACTTTCTGAGGCCAGGAGCTGACAGCCTCCTTGGAATACTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| 3UTR CCA 90 bp | AGAGCTAATGGGTTTGTACTTGTTCAAGGGTATCTGGGGCACTCCTaGTACTTTCTTCAGGGGTCAGCATATCTGCGCAGGCTTCAGCAG | + |
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Preference number: 1 (lower is better) Translates to: RANGFVLVQGYLGHS*YFLQGSAYLRRLQQ Trigger: CTGCTGAAGCCTGCGCAGATATGCTGACCCCTGAAGAAAGTACCAGGAGTGCCCCAGATACCCTTGAACAAGTACAAACCCATTAGCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| 3UTR CCA 90 bp | CAGGCAAAGAATGGCCTTGAAATTCAGTGCAGAGATACGGTCACATaGATACAATGGGACACAGACAAACCACTTTGGGAGGGACAGGGA | + |
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Preference number: 1 (lower is better) Translates to: QAKNGLEIQCRDTVT*IQWDTDKPLWEGQG Trigger: TCCCTGTCCCTCCCAAAGTGGTTTGTCTGTGTCCCATTGTATCCATGTGACCGTATCTCTGCACTGAATTTCAAGGCCATTCTTTGCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| 3UTR CCA 90 bp | ACAGAAAACAGAGAGCTAATGGGTTTGTACTTGTTCAAGGGTATCTaGGGCACTCCTGGTACTTTCTTCAGGGGTCAGCATATCTGCGCA | + |
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Preference number: 1 (lower is better) Translates to: TENRELMGLYLFKGI*GTPGTFFRGQHICA Trigger: TGCGCAGATATGCTGACCCCTGAAGAAAGTACCAGGAGTGCCCCAGATACCCTTGAACAAGTACAAACCCATTAGCTCTCTGTTTTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| 3UTR CCA 90 bp | CCAGCAACTCTTCTGACTTCTCGCTCTCCTGCATCTTTGTGGCCTTaGGGATTACAAGTGATTGTTTATGGTGATCCTCTAGAAAGATTC | + |
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Preference number: 1 (lower is better) Translates to: PATLLTSRSPASLWP*GLQVIVYGDPLERF Trigger: GAATCTTTCTAGAGGATCACCATAAACAATCACTTGTAATCCCCAAGGCCACAAAGATGCAGGAGAGCGAGAAGTCAGAAGAGTTGCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| 3UTR TCA 90 bp | GTGCCTAGAGTAATTGTTTCCTACCGGTGCAGGCTGGAAGTGGGCTaGGATCTTCTTGTGTGTGTGAATCTATATATTTGTATGCCACAT | + |
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Preference number: 1 (lower is better) Translates to: VPRVIVSYRCRLEVG*DLLVCVNLYICMPH Trigger: ATGTGGCATACAAATATATAGATTCACACACACAAGAAGATCTCAGCCCACTTCCAGCCTGCACCGGTAGGAAACAATTACTCTAGGCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| 3UTR-3UTR TCA 90 bp | GACATGCTCAAAGGGACCAGACCCTGCTGGTTTCTCCCCACGGAATCCAGCCACTTTCACAGGTGCGCATaGCAGCTGGGTGGCTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: DMLKGTRPCWFLPTESSHFHRCA*QLGGCC Trigger: ACAGCAGCCACCCAGCTGTCATGCGCACCTGTGAAA...GTGGCTGGATTCCGTGGGGAGAAACCAGCAGGGTCTGGTCCCTTTGAGCATGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| 3UTR CAA 90 bp | AACCGGGTACAGATGACCATGCAGGCAATACCCAGGAGCTGCAGCTaGTATCTGGGGACCAGCCTCCTTCGCAGGTACCGGTCTACACAC | + |
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Preference number: 2 (lower is better) Translates to: NRVQMTMQAIPRSCS*YLGTSLLRRYRSTH Trigger: GTGTGTAGACCGGTACCTGCGAAGGAGGCTGGTCCCCAGATACAAGCTGCAGCTCCTGGGTATTGCCTGCATGGTCATCTGTACCCGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234541.2 |
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| 3UTR-3UTR TCA 90 bp | CATGCTCAAAGGGACCAGACCCTGCTGGTTTCTCCCCACGGAATCCAGCCACAACCTGGCCTCAGAAAGTaGATGCCAACACAGAGGCTC | + |
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Preference number: 2 (lower is better) Translates to: HAQRDQTLLVSPHGIQPQPGLRK*MPTQRL Trigger: GAGCCTCTGTGTTGGCATTCACTTTCTGAGGCCAGG...TTGTGGCTGGATTCCGTGGGGAGAAACCAGCAGGGTCTGGTCCCTTTGAGCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| 3UTR-3UTR TCA 90 bp | TTTGGGAGGGACAGGGATGCCTGCAACTCCAGCTTTAAGGGCCTCACACACCATCTGAGCTCAGTGTCCTaGCAGCTTGCACTGAACTCC | + |
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Preference number: 2 (lower is better) Translates to: FGRDRDACNSSFKGLTHHLSSVS*QLALNS Trigger: GGAGTTCAGTGCAAGCTGTCAGGACACTGAGCTCAG...ATGGTGTGTGAGGCCCTTAAAGCTGGAGTTGCAGGCATCCCTGTCCCTCCCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| 3UTR-3UTR TCA 90 bp | CATGCTCAAAGGGACCAGACCCTGCTGGTTTCTCCCCACGGAATCCAGCCACAATTGCCAGCAAGGGTTTaGACTGTGTTAGGCCACCTG | + |
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Preference number: 2 (lower is better) Translates to: HAQRDQTLLVSPHGIQPQLPARV*TVLGHL Trigger: CAGGTGGCCTAACACAGTTCAAACCCTTGCTGGCAA...TTGTGGCTGGATTCCGTGGGGAGAAACCAGCAGGGTCTGGTCCCTTTGAGCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| 3UTR-3UTR CCA 90 bp | CATGCTCAAAGGGACCAGACCCTGCTGGTTTCTCCCCACGGAATCCAGCCACAAACAGACAAACCACTTTaGGAGGGACAGGGATGCCTG | + |
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Preference number: 2 (lower is better) Translates to: HAQRDQTLLVSPHGIQPQTDKPL*EGQGCL Trigger: CAGGCATCCCTGTCCCTCCCAAAGTGGTTTGTCTGT...TTGTGGCTGGATTCCGTGGGGAGAAACCAGCAGGGTCTGGTCCCTTTGAGCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| 3UTR-3UTR CCA 90 bp | AGACAAACCACTTTGGGAGGGACAGGGATGCCTGCAACTCCAGCTTTAAGGGCCAAGGGTAGACAGGGATaGGTTTCACAGGTGCGCATG | + |
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Preference number: 2 (lower is better) Translates to: RQTTLGGTGMPATPALRAKGRQG*VSQVRM Trigger: CATGCGCACCTGTGAAACCCATCCCTGTCTACCCTT...GGCCCTTAAAGCTGGAGTTGCAGGCATCCCTGTCCCTCCCAAAGTGGTTTGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| 3UTR CAA 90 bp | TTGAGAGCTCCCCACTGGTCTAAAACAAGACTTGCCAGCAAGGGTTaGAACTGTGTTAGGCCACCTGGGCCGCTAGTATTCCAAGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: LRAPHWSKTRLASKG*NCVRPPGPLVFQGG Trigger: GCCTCCTTGGAATACTAGCGGCCCAGGTGGCCTAACACAGTTCAAACCCTTGCTGGCAAGTCTTGTTTTAGACCAGTGGGGAGCTCTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| 3UTR-3UTR TCA 90 bp | CAGGCTTCAGCAGACACCCCAGGTGTTGAGGACAGCTGCCTCATAAATCACAAGAGTGCTGTCTTCACTTaGGAGCTCCCCACTGGTCTA | + |
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Preference number: 2 (lower is better) Translates to: QASADTPGVEDSCLINHKSAVFT*ELPTGL Trigger: TAGACCAGTGGGGAGCTCTCAAGTGAAGACAGCACT...CTTGTGATTTATGAGGCAGCTGTCCTCAACACCTGGGGTGTCTGCTGAAGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| 3UTR-3UTR GCA 90 bp | ATGGGTTTGTACTTGTTCAAGGGTATCTGGGGCACTCCTGGTACTTTCTTCAGGAGCTTCGGGTCCTCTTaGAGTCCTTCTGCCTGCCGG | + |
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Preference number: 2 (lower is better) Translates to: MGLYLFKGIWGTPGTFFRSFGSS*SPSACR Trigger: CCGGCAGGCAGAAGGACTGCAAGAGGACCCGAAGCT...CCTGAAGAAAGTACCAGGAGTGCCCCAGATACCCTTGAACAAGTACAAACCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| 3UTR-3UTR CCA 90 bp | CATGCTCAAAGGGACCAGACCCTGCTGGTTTCTCCCCACGGAATCCAGCCACAATTGAGAGCTCCCCACTaGTCTAAAACAAGACTTGCC | + |
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Preference number: 2 (lower is better) Translates to: HAQRDQTLLVSPHGIQPQLRAPH*SKTRLA Trigger: GGCAAGTCTTGTTTTAGACCAGTGGGGAGCTCTCAA...TTGTGGCTGGATTCCGTGGGGAGAAACCAGCAGGGTCTGGTCCCTTTGAGCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| 3UTR CAA 90 bp | CAGAGATACGGTCACATGGATACAATGGGACACAGACAAACCACTTaGGGAGGGACAGGGATGCCTGCAACTCCAGCTTTAAGGGCCTCA | + |
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Preference number: 2 (lower is better) Translates to: QRYGHMDTMGHRQTT*GGTGMPATPALRAS Trigger: TGAGGCCCTTAAAGCTGGAGTTGCAGGCATCCCTGTCCCTCCCAAAGTGGTTTGTCTGTGTCCCATTGTATCCATGTGACCGTATCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| 3UTR-3UTR CCA 90 bp | CCAGCCTCCTTCGCAGGTACCGGTCTACACACTCCACAGTCAGGTGAAGACACATGTACCTTTGGGTGTTaGTTCTCTTCTTCCACGACA | + |
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Preference number: 2 (lower is better) Translates to: PASFAGTGLHTPQSGEDTCTFGC*FSSSTT Trigger: TGTCGTGGAAGAAGAGAACCAACACCCAAAGGTACA...TGTGTCTTCACCTGACTGTGGAGTGTGTAGACCGGTACCTGCGAAGGAGGCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234541.2 |
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| 3UTR CAA 90 bp | GTGTTGTCTGTGAGCCACACAGCCTCTCTAATCGTCAGAATCTCTTaGCTGATGAACCGGGTACAGATGACCATGCAGGCAATACCCAGG | + |
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Preference number: 2 (lower is better) Translates to: VLSVSHTASLIVRIS*LMNRVQMTMQAIPR Trigger: CCTGGGTATTGCCTGCATGGTCATCTGTACCCGGTTCATCAGCAAAGAGATTCTGACGATTAGAGAGGCTGTGTGGCTCACAGACAACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234541.2 |
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| 3UTR-3UTR CCA 90 bp | GTGCAGGCTGGAAGTGGGCTGAGATCTTCTTGTGTGTGTGAATCTATATATTTGGGTGCGCATGACAGCTaGGTGGCTGCTGTCCAACAC | + |
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Preference number: 2 (lower is better) Translates to: VQAGSGLRSSCVCESIYLGAHDS*VAAVQH Trigger: GTGTTGGACAGCAGCCACCCAGCTGTCATGCGCACC...CAAATATATAGATTCACACACACAAGAAGATCTCAGCCCACTTCCAGCCTGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| 3UTR-3UTR TCA 90 bp | CAGAATCTCTTTGCTGATGAACCGGGTACAGATGACCATGCAGGCAATACCCAGCACTCCACAGTCAGGTaGAGACACAGGCTTGTAAAG | + |
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Preference number: 2 (lower is better) Translates to: QNLFADEPGTDDHAGNTQHSTVR*RHRLVK Trigger: CTTTACAAGCCTGTGTCTTCACCTGACTGTGGAGTG...CTGGGTATTGCCTGCATGGTCATCTGTACCCGGTTCATCAGCAAAGAGATTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234541.2 |
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| 3UTR-3UTR CCA 90 bp | AATACCCAGGAGCTGCAGCTTGTATCTGGGGACCAGCCTCCTTCGCAGGTACCGATTAGAATGTACCTTTaGGTGTTGGTTCTCTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: NTQELQLVSGDQPPSQVPIRMYL*VLVLFF Trigger: GAAGAAGAGAACCAACACCCAAAGGTACATTCTAAT...CGGTACCTGCGAAGGAGGCTGGTCCCCAGATACAAGCTGCAGCTCCTGGGTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234541.2 |
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| 3UTR-3UTR GCA 90 bp | ATGGGTTTGTACTTGTTCAAGGGTATCTGGGGCACTCCTGGTACTTTCTTCAGGCAGTCAACACTGATATaGAGGGACACAGGCTCCCTA | + |
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Preference number: 2 (lower is better) Translates to: MGLYLFKGIWGTPGTFFRQSTLI*RDTGSL Trigger: TAGGGAGCCTGTGTCCCTGCATATCAGTGTTGACTG...CCTGAAGAAAGTACCAGGAGTGCCCCAGATACCCTTGAACAAGTACAAACCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| 3UTR-3UTR GCA 90 bp | GTGCAGGCTGGAAGTGGGCTGAGATCTTCTTGTGTGTGTGAATCTATATATTTGGACTTCTCGCTCTCCTaGATCTTTGTGGCCTTGGGG | + |
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Preference number: 2 (lower is better) Translates to: VQAGSGLRSSCVCESIYLDFSLS*IFVALG Trigger: CCCCAAGGCCACAAAGATGCAGGAGAGCGAGAAGTC...CAAATATATAGATTCACACACACAAGAAGATCTCAGCCCACTTCCAGCCTGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| 3UTR CAA 90 bp | GCCACAAACCCAGCAACTCTTCTGACTTCTCGCTCTCCTGCATCTTaGTGGCCTTGGGGATTACAAGTGATTGTTTATGGTGATCCTCTA | + |
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Preference number: 2 (lower is better) Translates to: ATNPATLLTSRSPAS*WPWGLQVIVYGDPL Trigger: TAGAGGATCACCATAAACAATCACTTGTAATCCCCAAGGCCACAAAGATGCAGGAGAGCGAGAAGTCAGAAGAGTTGCTGGGTTTGTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| 3UTR-3UTR CCA 90 bp | CCATTCGGGAACCATGAACAAGATGGGAGGAAAGGGATAATTACCACTCATGCATATCTGGGGCACTCCTaGTACTTTCTTCAGGGGTCA | + |
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Preference number: 2 (lower is better) Translates to: PFGNHEQDGRKGIITTHAYLGHS*YFLQGS Trigger: TGACCCCTGAAGAAAGTACCAGGAGTGCCCCAGATA...TGCATGAGTGGTAATTATCCCTTTCCTCCCATCTTGTTCATGGTTCCCGAATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| 3UTR CAA 90 bp | AAGAGCTGCCATAGGGATGGAACAGAAAACAGAGAGCTAATGGGTTaGTACTTGTTCAAGGGTATCTGGGGCACTCCTGGTACTTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: KSCHRDGTENRELMG*YLFKGIWGTPGTFF Trigger: GAAGAAAGTACCAGGAGTGCCCCAGATACCCTTGAACAAGTACAAACCCATTAGCTCTCTGTTTTCTGTTCCATCCCTATGGCAGCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| 3UTR-3UTR TCA 90 bp | CTTGTGTGTGTGAATCTATATATTTGTATGCCACATGTAGACCTGGTGGCCACAACCCAGCAACTCTTCTaGCTTCTCGCTCTCCTGCAT | + |
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Preference number: 2 (lower is better) Translates to: LVCVNLYICMPHVDLVATTQQLF*LLALLH Trigger: ATGCAGGAGAGCGAGAAGTCAGAAGAGTTGCTGGGT...TGTGGCCACCAGGTCTACATGTGGCATACAAATATATAGATTCACACACACAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| 3UTR-3UTR CCA 90 bp | CCATTCGGGAACCATGAACAAGATGGGAGGAAAGGGATAATTACCACTCATGCACAAGGAAAGAACATATaGCTAGAACCAAGGGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: PFGNHEQDGRKGIITTHAQGKNI*LEPRGG Trigger: CCCACCCCTTGGTTCTAGCCATATGTTCTTTCCTTG...TGCATGAGTGGTAATTATCCCTTTCCTCCCATCTTGTTCATGGTTCCCGAATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| 3UTR-3UTR TCA 90 bp | CCATTCGGGAACCATGAACAAGATGGGAGGAAAGGGATAATTACCACTCATGCACTTGGGGATTACAAGTaGTTGTTTATGGTGATCCTC | + |
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Preference number: 2 (lower is better) Translates to: PFGNHEQDGRKGIITTHALGDYK*LFMVIL Trigger: GAGGATCACCATAAACAATCACTTGTAATCCCCAAG...TGCATGAGTGGTAATTATCCCTTTCCTCCCATCTTGTTCATGGTTCCCGAATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| 3UTR GCA 72 bp | ACCCAGGCCCCGTTGACTTGGAGCTTCGGGTCCTCTTaGAGTCCTTCTGCCTGCCGGGACAGTCGGGAGAGG | + |
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Preference number: 3 (lower is better) Translates to: TQAPLTWSFGSS*SPSACRDSRER Trigger: CCTCTCCCGACTGTCCCGGCAGGCAGAAGGACTGCAAGAGGACCCGAAGCTCCAAGTCAACGGGGCCTGGGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| 3UTR GCA 72 bp | CGGGTACAGATGACCATGCAGGCAATACCCAGGAGCTaGAGCTTGTATCTGGGGACCAGCCTCCTTCGCAGG | + |
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Preference number: 3 (lower is better) Translates to: RVQMTMQAIPRS*SLYLGTSLLRR Trigger: CCTGCGAAGGAGGCTGGTCCCCAGATACAAGCTGCAGCTCCTGGGTATTGCCTGCATGGTCATCTGTACCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234541.2 |
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| 3UTR CCA 72 bp | CCCGGAGACAACAGGACACAGAAGGGTAGACAGGGATaGGTTTCACAGGTGCGCATGACAGCTGGGTGGCTG | + |
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Preference number: 3 (lower is better) Translates to: PGDNRTQKGRQG*VSQVRMTAGWL Trigger: CAGCCACCCAGCTGTCATGCGCACCTGTGAAACCCATCCCTGTCTACCCTTCTGTGTCCTGTTGTCTCCGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| 3UTR TCA 72 bp | CTAGAACCAAGGGGTGGGAGTAGGAGTTTCCGGTTCTaGGGTCAGATGACCCAGGCCCCGTTGACTTGGAGC | + |
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Preference number: 3 (lower is better) Translates to: LEPRGGSRSFRF*GQMTQAPLTWS Trigger: GCTCCAAGTCAACGGGGCCTGGGTCATCTGACCTCAGAACCGGAAACTCCTACTCCCACCCCTTGGTTCTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| 3UTR GCA 72 bp | CAAGGAGGCTGTCAGCTCCTGGCCTCAGAAAGTGAATaGCAACACAGAGGCTCATGCTCCCGGAGACAACAG | + |
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Preference number: 3 (lower is better) Translates to: QGGCQLLASESE*QHRGSCSRRQQ Trigger: CTGTTGTCTCCGGGAGCATGAGCCTCTGTGTTGGCATTCACTTTCTGAGGCCAGGAGCTGACAGCCTCCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| 3UTR TCA 72 bp | TCAACACTGATATGCAGGGACACAGGCTCCCTAGGCTaGAGGGGTGTGGGAGGAGAGTGCTGTCTTCACTTG | + |
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Preference number: 3 (lower is better) Translates to: STLICRDTGSLG*RGVGGECCLHL Trigger: CAAGTGAAGACAGCACTCTCCTCCCACACCCCTTCAGCCTAGGGAGCCTGTGTCCCTGCATATCAGTGTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| 3UTR-3UTR CAA 90 bp | TTTGGGAGGGACAGGGATGCCTGCAACTCCAGCTTTAAGGGCCTCACACACCATCTTGCCAGCAAGGGTTaGAACTGTGTTAGGCCACCT | + |
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Preference number: 3 (lower is better) Translates to: FGRDRDACNSSFKGLTHHLASKG*NCVRPP Trigger: AGGTGGCCTAACACAGTTCAAACCCTTGCTGGCAAG...ATGGTGTGTGAGGCCCTTAAAGCTGGAGTTGCAGGCATCCCTGTCCCTCCCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| 3UTR TCA 72 bp | CATATCTGCGCAGGCTTCAGCAGACACCCCAGGTGTTaGGGACAGCTGCCTCATAAATCACAAGGCAAAGCA | + |
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Preference number: 3 (lower is better) Translates to: HICAGFSRHPRC*GQLPHKSQGKA Trigger: TGCTTTGCCTTGTGATTTATGAGGCAGCTGTCCTCAACACCTGGGGTGTCTGCTGAAGCCTGCGCAGATATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| 3UTR GCA 72 bp | CAGGCTTCAGCAGACACCCCAGGTGTTGAGGACAGCTaGCTCATAAATCACAAGGCAAAGCATTCGCTGACA | + |
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Preference number: 3 (lower is better) Translates to: QASADTPGVEDS*LINHKAKHSLT Trigger: TGTCAGCGAATGCTTTGCCTTGTGATTTATGAGGCAGCTGTCCTCAACACCTGGGGTGTCTGCTGAAGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| 3UTR-3UTR CAA 90 bp | CATGCTCAAAGGGACCAGACCCTGCTGGTTTCTCCCCACGGAATCCAGCCACAATGCATCTTTGTGGCCTaGGGGATTACAAGTGATTGT | + |
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Preference number: 3 (lower is better) Translates to: HAQRDQTLLVSPHGIQPQCIFVA*GITSDC Trigger: ACAATCACTTGTAATCCCCAAGGCCACAAAGATGCA...TTGTGGCTGGATTCCGTGGGGAGAAACCAGCAGGGTCTGGTCCCTTTGAGCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| 3UTR-3UTR CAA 90 bp | AGAGAGCTAATGGGTTTGTACTTGTTCAAGGGTATCTGGGGCACTCCTGGTACTCACAGACAAACCACTTaGGGAGGGACAGGGATGCCT | + |
|
Preference number: 3 (lower is better) Translates to: RELMGLYLFKGIWGTPGTHRQTT*GGTGMP Trigger: AGGCATCCCTGTCCCTCCCAAAGTGGTTTGTCTGTG...AGTACCAGGAGTGCCCCAGATACCCTTGAACAAGTACAAACCCATTAGCTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| 3UTR TCA 72 bp | CTTCGCAGGTACCGGTCTACACACTCCACAGTCAGGTaGAGACACAGGCTTGTAAAGTCCTTCATTGTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: LRRYRSTHSTVR*RHRLVKSFIVA Trigger: TGCCACAATGAAGGACTTTACAAGCCTGTGTCTTCACCTGACTGTGGAGTGTGTAGACCGGTACCTGCGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234541.2 |
||
| 3UTR GCA 72 bp | TGCCTCATAAATCACAAGGCAAAGCATTCGCTGACATaGTCAAAGGGACCAGACCCTGCTGGTTTCTCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: CLINHKAKHSLT*SKGPDPAGFSP Trigger: TGGGGAGAAACCAGCAGGGTCTGGTCCCTTTGAGCATGTCAGCGAATGCTTTGCCTTGTGATTTATGAGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| 3UTR CCA 72 bp | GAAATTCAGTGCAGAGATACGGTCACATGGATACAATaGGACACAGACAAACCACTTTGGGAGGGACAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: EIQCRDTVTWIQ*DTDKPLWEGQG Trigger: TCCCTGTCCCTCCCAAAGTGGTTTGTCTGTGTCCCATTGTATCCATGTGACCGTATCTCTGCACTGAATTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| 3UTR CCA 72 bp | AGAGAGCTAATGGGTTTGTACTTGTTCAAGGGTATCTaGGGCACTCCTGGTACTTTCTTCAGGGGTCAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: RELMGLYLFKGI*GTPGTFFRGQH Trigger: ATGCTGACCCCTGAAGAAAGTACCAGGAGTGCCCCAGATACCCTTGAACAAGTACAAACCCATTAGCTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| 3UTR CCA 72 bp | AATGGCCTTGAAATTCAGTGCAGAGATACGGTCACATaGATACAATGGGACACAGACAAACCACTTTGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: NGLEIQCRDTVT*IQWDTDKPLWE Trigger: CTCCCAAAGTGGTTTGTCTGTGTCCCATTGTATCCATGTGACCGTATCTCTGCACTGAATTTCAAGGCCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| 3UTR CCA 72 bp | CTTCTGACTTCTCGCTCTCCTGCATCTTTGTGGCCTTaGGGATTACAAGTGATTGTTTATGGTGATCCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: LLTSRSPASLWP*GLQVIVYGDPL Trigger: TAGAGGATCACCATAAACAATCACTTGTAATCCCCAAGGCCACAAAGATGCAGGAGAGCGAGAAGTCAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| 3UTR TCA 72 bp | GTAATTGTTTCCTACCGGTGCAGGCTGGAAGTGGGCTaGGATCTTCTTGTGTGTGTGAATCTATATATTTGT | + |
|
Preference number: 3 (lower is better) Translates to: VIVSYRCRLEVG*DLLVCVNLYIC Trigger: ACAAATATATAGATTCACACACACAAGAAGATCTCAGCCCACTTCCAGCCTGCACCGGTAGGAAACAATTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR CCA 90 bp | CAGGAGCTGCAGCTTGTATCTGGGGACCAGCCTCCTTCGCAGGTACCGGTCTACACAGCCTGGGAGGCCTaGAAGAGCTGGCAGACCGAC | + |
|
Preference number: 4 (lower is better) Translates to: QELQLVSGDQPPSQVPVYTAWEA*KSWQTD Trigger: GTCGGTCTGCCAGCTCTTCCAGGCCTCCCAGGCTGT...GTAGACCGGTACCTGCGAAGGAGGCTGGTCCCCAGATACAAGCTGCAGCTCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234541.2 |
||
| CDS-3UTR CCA 90 bp | CATGACAGCTGGGTGGCTGCTGTCCAACACGTAGAGGCTGAGCTGGTCACTGAGACAGCCTGGGAGGCCTaGAAGAGCTGGCAGACCGAC | + |
|
Preference number: 4 (lower is better) Translates to: HDSWVAAVQHVEAELVTETAWEA*KSWQTD Trigger: GTCGGTCTGCCAGCTCTTCCAGGCCTCCCAGGCTGT...CTCAGTGACCAGCTCAGCCTCTACGTGTTGGACAGCAGCCACCCAGCTGTCATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| 3UTR CAA 72 bp | CCGGTTCTGAGGTCAGATGACCCAGGCCCCGTTGACTaGGAGCTTCGGGTCCTCTTGCAGTCCTTCTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PVLRSDDPGPVD*ELRVLLQSFCL Trigger: CAGGCAGAAGGACTGCAAGAGGACCCGAAGCTCCAAGTCAACGGGGCCTGGGTCATCTGACCTCAGAACCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR TCA 90 bp | TTTGGGAGGGACAGGGATGCCTGCAACTCCAGCTTTAAGGGCCTCACACACCATTCCCGGAGGGCGAGCTaGGGAAGGTGTGGATCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FGRDRDACNSSFKGLTHHSRRAS*GRCGSP Trigger: GGGAGATCCACACCTTCCTCAGCTCGCCCTCCGGGA...ATGGTGTGTGAGGCCCTTAAAGCTGGAGTTGCAGGCATCCCTGTCCCTCCCAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR GCA 90 bp | GACATGCTCAAAGGGACCAGACCCTGCTGGTTTCTCCCCACGGAATCCAGCCACGTCCAGGGCTGTGTCTaGCCATGCATGAGTCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: DMLKGTRPCWFLPTESSHVQGCV*PCMSLA Trigger: GGCCAGACTCATGCATGGGCAGACACAGCCCTGGAC...GTGGCTGGATTCCGTGGGGAGAAACCAGCAGGGTCTGGTCCCTTTGAGCATGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR CCA 90 bp | GCTGCAGCTTGTATCTGGGGACCAGCCTCCTTCGCAGGTACCGGTCTACACACTGAGGCCTGGAAGAGCTaGCAGACCGACTCACTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AAACIWGPASFAGTGLHTEAWKS*QTDSLQ Trigger: CTGCAGTGAGTCGGTCTGCCAGCTCTTCCAGGCCTC...AGTGTGTAGACCGGTACCTGCGAAGGAGGCTGGTCCCCAGATACAAGCTGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234541.2 |
||
| 3UTR CAA 72 bp | CAGATGACCATGCAGGCAATACCCAGGAGCTGCAGCTaGTATCTGGGGACCAGCCTCCTTCGCAGGTACCGG | + |
|
Preference number: 4 (lower is better) Translates to: QMTMQAIPRSCS*YLGTSLLRRYR Trigger: CCGGTACCTGCGAAGGAGGCTGGTCCCCAGATACAAGCTGCAGCTCCTGGGTATTGCCTGCATGGTCATCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234541.2 |
||
| CDS-3UTR TCA 90 bp | CATGCTCAAAGGGACCAGACCCTGCTGGTTTCTCCCCACGGAATCCAGCCACAACTGCGGTGGGTGTGGTaGCAAAGCTGCCTCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HAQRDQTLLVSPHGIQPQLRWVW*QSCLCP Trigger: AGGACAGAGGCAGCTTTGTCACCACACCCACCGCAG...TTGTGGCTGGATTCCGTGGGGAGAAACCAGCAGGGTCTGGTCCCTTTGAGCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR TCA 90 bp | CATGCTCAAAGGGACCAGACCCTGCTGGTTTCTCCCCACGGAATCCAGCCACAAGTCTGCTGGGAGCTGTaGCATCACCCTCCTTCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: HAQRDQTLLVSPHGIQPQVCWEL*HHPPSR Trigger: GCGAGAAGGAGGGTGATGTCACAGCTCCCAGCAGAC...TTGTGGCTGGATTCCGTGGGGAGAAACCAGCAGGGTCTGGTCCCTTTGAGCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR GCA 90 bp | CAAGGAGGCTGTCAGCTCCTGGCCTCAGAAAGTGAATGCCAACACAGAGGCTCACCCGATCTCCCCGATTaGAGAGAAGGGGCCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QGGCQLLASESECQHRGSPDLPD*REGAWE Trigger: CTCCCAGGCCCCTTCTCTGCAATCGGGGAGATCGGG...TGAGCCTCTGTGTTGGCATTCACTTTCTGAGGCCAGGAGCTGACAGCCTCCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR CCA 90 bp | TACCCAGGAGCTGCAGCTTGTATCTGGGGACCAGCCTCCTTCGCAGGTACCGGTCCTTCCAGTCCAAGTTaGCTTCCACCTGCACAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: YPGAAACIWGPASFAGTGPSSPS*LPPAQA Trigger: AGCCTGTGCAGGTGGAAGCCAACTTGGACTGGAAGG...ACCGGTACCTGCGAAGGAGGCTGGTCCCCAGATACAAGCTGCAGCTCCTGGGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234541.2 |
||
| CDS-3UTR CCA 90 bp | GACATGCTCAAAGGGACCAGACCCTGCTGGTTTCTCCCCACGGAATCCAGCCACTGCTTGTTGACAGCCTaGGAGGCCTGGAAGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DMLKGTRPCWFLPTESSHCLLTA*EAWKSW Trigger: CCAGCTCTTCCAGGCCTCCCAGGCTGTCAACAAGCA...GTGGCTGGATTCCGTGGGGAGAAACCAGCAGGGTCTGGTCCCTTTGAGCATGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR TCA 90 bp | TGGGACACAGACAAACCACTTTGGGAGGGACAGGGATGCCTGCAACTCCAGCTTGCTCGGAGGCTGTCATaGACCACAGCCTTGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: WDTDKPLWEGQGCLQLQLARRLS*TTALQQ Trigger: CTGCTGCAAGGCTGTGGTTCATGACAGCCTCCGAGC...AAGCTGGAGTTGCAGGCATCCCTGTCCCTCCCAAAGTGGTTTGTCTGTGTCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR TCA 90 bp | CATGCTCAAAGGGACCAGACCCTGCTGGTTTCTCCCCACGGAATCCAGCCACAAACCTCATGGTGTCGCTaGGCCCCTTCTGCACAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: HAQRDQTLLVSPHGIQPQTSWCR*APSAQR Trigger: TCTCTGTGCAGAAGGGGCTCAGCGACACCATGAGGT...TTGTGGCTGGATTCCGTGGGGAGAAACCAGCAGGGTCTGGTCCCTTTGAGCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR TCA 90 bp | CATGCTCCCGGAGACAACAGGACACAGAAGGGTAGACAGGGATGGGTTTCACAGGGTGTGGATCTCCCCTaGGCTAGGGAAAGATGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: HAPGDNRTQKGRQGWVSQGVDLP*ARERWG Trigger: CCCCCATCTTTCCCTAGCTCAGGGGAGATCCACACC...CTGTGAAACCCATCCCTGTCTACCCTTCTGTGTCCTGTTGTCTCCGGGAGCATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR TCA 90 bp | CATGCTCAAAGGGACCAGACCCTGCTGGTTTCTCCCCACGGAATCCAGCCACAAGCAAGGCTTTGTGCTTaGGTGGCTGCCCACAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: HAQRDQTLLVSPHGIQPQARLCA*VAAHRE Trigger: CTCTCTGTGGGCAGCCACTCAAGCACAAAGCCTTGC...TTGTGGCTGGATTCCGTGGGGAGAAACCAGCAGGGTCTGGTCCCTTTGAGCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR GCA 90 bp | CAGGCTTCAGCAGACACCCCAGGTGTTGAGGACAGCTGCCTCATAAATCACAAGCTGGAGGTGCCTGGGTaGCTGGTGCTGGGTGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: QASADTPGVEDSCLINHKLEVPG*LVLGGS Trigger: AGATCCACCCAGCACCAGGCACCCAGGCACCTCCAG...CTTGTGATTTATGAGGCAGCTGTCCTCAACACCTGGGGTGTCTGCTGAAGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS-3UTR CCA 90 bp | CATGACAGCTGGGTGGCTGCTGTCCAACACGTAGAGGCTGAGCTGGTCACTGAGGCCCACACACTGGCATaGTTGTCCACCAGGTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: HDSWVAAVQHVEAELVTEAHTLA*LSTRYL Trigger: CAAGTACCTGGTGGACAACCATGCCAGTGTGTGGGC...CTCAGTGACCAGCTCAGCCTCTACGTGTTGGACAGCAGCCACCCAGCTGTCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS-3UTR CCA 90 bp | TTTGGGAGGGACAGGGATGCCTGCAACTCCAGCTTTAAGGGCCTCACACACCATGAAGGCCACAGCTCCTaGAAGCTGGCAGATGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FGRDRDACNSSFKGLTHHEGHSS*KLADAH Trigger: GTGGGCATCTGCCAGCTTCCAGGAGCTGTGGCCTTC...ATGGTGTGTGAGGCCCTTAAAGCTGGAGTTGCAGGCATCCCTGTCCCTCCCAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS-3UTR CCA 90 bp | CCAGCCTCCTTCGCAGGTACCGGTCTACACACTCCACAGTCAGGTGAAGACACATGCTTGTTGACAGCCTaGGAGGCCTGGAAGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PASFAGTGLHTPQSGEDTCLLTA*EAWKSW Trigger: CCAGCTCTTCCAGGCCTCCCAGGCTGTCAACAAGCA...TGTGTCTTCACCTGACTGTGGAGTGTGTAGACCGGTACCTGCGAAGGAGGCTGG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234541.2 |
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| CDS-3UTR CCA 90 bp | CATGCTCCCGGAGACAACAGGACACAGAAGGGTAGACAGGGATGGGTTTCACAGGGTCCCACAGATGAGTaGTCCAGGGCTGTGTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: HAPGDNRTQKGRQGWVSQGPTDE*SRAVSA Trigger: GGCAGACACAGCCCTGGACCACTCATCTGTGGGACC...CTGTGAAACCCATCCCTGTCTACCCTTCTGTGTCCTGTTGTCTCCGGGAGCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS-3UTR CCA 90 bp | CATGCTCAAAGGGACCAGACCCTGCTGGTTTCTCCCCACGGAATCCAGCCACAAGTGAACACCGCTCTCTaGGGAGTTTGGGGGACGACA | + |
|
Preference number: 4 (lower is better) Translates to: HAQRDQTLLVSPHGIQPQVNTAL*GVWGTT Trigger: TGTCGTCCCCCAAACTCCCCAGAGAGCGGTGTTCAC...TTGTGGCTGGATTCCGTGGGGAGAAACCAGCAGGGTCTGGTCCCTTTGAGCATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR GCA 90 bp | TGGGACACAGACAAACCACTTTGGGAGGGACAGGGATGCCTGCAACTCCAGCTTGGCTGTGTCTGCCCATaGATGAGTCTGGCCAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: WDTDKPLWEGQGCLQLQLGCVCP*MSLARR Trigger: TCTCCTGGCCAGACTCATGCATGGGCAGACACAGCC...AAGCTGGAGTTGCAGGCATCCCTGTCCCTCCCAAAGTGGTTTGTCTGTGTCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS-3UTR CCA 90 bp | CATGCTCAAAGGGACCAGACCCTGCTGGTTTCTCCCCACGGAATCCAGCCACAACCTTCCAGTCCAAGTTaGCTTCCACCTGCACAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HAQRDQTLLVSPHGIQPQPSSPS*LPPAQA Trigger: AGCCTGTGCAGGTGGAAGCCAACTTGGACTGGAAGG...TTGTGGCTGGATTCCGTGGGGAGAAACCAGCAGGGTCTGGTCCCTTTGAGCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR CCA 90 bp | CAGGCTTCAGCAGACACCCCAGGTGTTGAGGACAGCTGCCTCATAAATCACAAGAGGTGCCTGGGTGCCTaGTGCTGGGTGGATCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QASADTPGVEDSCLINHKRCLGA*CWVDLV Trigger: GACAAGATCCACCCAGCACCAGGCACCCAGGCACCT...CTTGTGATTTATGAGGCAGCTGTCCTCAACACCTGGGGTGTCTGCTGAAGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR TCA 90 bp | AGACAAACCACTTTGGGAGGGACAGGGATGCCTGCAACTCCAGCTTTAAGGGCCGTCTCTCAGCCATGCTaGAGAAGCGAGAGGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RQTTLGGTGMPATPALRAVSQPC*RSERPS Trigger: TGAAGGCCTCTCGCTTCTTCAGCATGGCTGAGAGAC...GGCCCTTAAAGCTGGAGTTGCAGGCATCCCTGTCCCTCCCAAAGTGGTTTGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR TCA 90 bp | CATGCTCCCGGAGACAACAGGACACAGAAGGGTAGACAGGGATGGGTTTCACAGCTGCCTCTGTCCTCCTaGAGGCTGTTTTCTCGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HAPGDNRTQKGRQGWVSQLPLSS*RLFSRF Trigger: GAAGCGAGAAAACAGCCTTCAGGAGGACAGAGGCAG...CTGTGAAACCCATCCCTGTCTACCCTTCTGTGTCCTGTTGTCTCCGGGAGCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS-3UTR TCA 90 bp | TGGGACACAGACAAACCACTTTGGGAGGGACAGGGATGCCTGCAACTCCAGCTTAGCAGTGTCTCCTCCTaGTTCGATAGCTCTGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: WDTDKPLWEGQGCLQLQLSSVSS*FDSSAV Trigger: CACCGCAGAGCTATCGAATCAGGAGGAGACACTGCT...AAGCTGGAGTTGCAGGCATCCCTGTCCCTCCCAAAGTGGTTTGTCTGTGTCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS-3UTR CCA 90 bp | TTTGGGAGGGACAGGGATGCCTGCAACTCCAGCTTTAAGGGCCTCACACACCATCAGATGCCCACACACTaGCATGGTTGTCCACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FGRDRDACNSSFKGLTHHQMPTH*HGCPPG Trigger: ACCTGGTGGACAACCATGCCAGTGTGTGGGCATCTG...ATGGTGTGTGAGGCCCTTAAAGCTGGAGTTGCAGGCATCCCTGTCCCTCCCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR CCA 90 bp | TGGGACACAGACAAACCACTTTGGGAGGGACAGGGATGCCTGCAACTCCAGCTTGAGCTTCAGGTTCTGTaGAGAAGGCCACAGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: WDTDKPLWEGQGCLQLQLELQVL*RRPQLL Trigger: CAGGAGCTGTGGCCTTCTCCACAGAACCTGAAGCTC...AAGCTGGAGTTGCAGGCATCCCTGTCCCTCCCAAAGTGGTTTGTCTGTGTCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR CCA 90 bp | TGTTCAAGGGTATCTGGGGCACTCCTGGTACTTTCTTCAGGGGTCAGCATATCTAAGCTGCACAGGTGCTaGGTTCTGGGTGCGACGGGG | + |
|
Preference number: 4 (lower is better) Translates to: CSRVSGALLVLSSGVSISKLHRC*VLGATG Trigger: CCCCGTCGCACCCAGAACCCAGCACCTGTGCAGCTT...AGATATGCTGACCCCTGAAGAAAGTACCAGGAGTGCCCCAGATACCCTTGAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR CCA 90 bp | GACATGCTCAAAGGGACCAGACCCTGCTGGTTTCTCCCCACGGAATCCAGCCACGAAAGATGGGGGCTCTaGGCTTTCCTGTTTTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: DMLKGTRPCWFLPTESSHERWGL*AFLFYS Trigger: GGAGTAAAACAGGAAAGCCCAGAGCCCCCATCTTTC...GTGGCTGGATTCCGTGGGGAGAAACCAGCAGGGTCTGGTCCCTTTGAGCATGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR CCA 90 bp | CATGCTCAAAGGGACCAGACCCTGCTGGTTTCTCCCCACGGAATCCAGCCACAAAGGCCTCCTCATCACTaGACTCCTGGCAGCAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: HAQRDQTLLVSPHGIQPQRPPHH*TPGSNV Trigger: AACATTGCTGCCAGGAGTCCAGTGATGAGGAGGCCT...TTGTGGCTGGATTCCGTGGGGAGAAACCAGCAGGGTCTGGTCCCTTTGAGCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR CCA 90 bp | TGGGTGGCTGCTGTCCAACACGTAGAGGCTGAGCTGGTCACTGAGCTCAGTGTCTGTACAGACAGGTTTTaGCGCTTTACAGGCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WVAAVQHVEAELVTELSVCTDRF*RFTGCW Trigger: CCAGCAGCCTGTAAAGCGCCAAAACCTGTCTGTACA...GACACTGAGCTCAGTGACCAGCTCAGCCTCTACGTGTTGGACAGCAGCCACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR TCA 90 bp | ATGAACCGGGTACAGATGACCATGCAGGCAATACCCAGGAGCTGCAGCTTGTATTCGCAGCGTAGTCCCTaGGTTTCCGGAAGCTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: MNRVQMTMQAIPRSCSLYSQRSP*VSGSCG Trigger: TCCACAGCTTCCGGAAACTCAGGGACTACGCTGCGA...ATACAAGCTGCAGCTCCTGGGTATTGCCTGCATGGTCATCTGTACCCGGTTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234541.2 |
||
| CDS-3UTR TCA 90 bp | CAGGCTTCAGCAGACACCCCAGGTGTTGAGGACAGCTGCCTCATAAATCACAAGATATCTGCTGCTTGTTaGCAGCCTGGGAGGCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QASADTPGVEDSCLINHKISAAC*QPGRPG Trigger: TCCAGGCCTCCCAGGCTGTCAACAAGCAGCAGATAT...CTTGTGATTTATGAGGCAGCTGTCCTCAACACCTGGGGTGTCTGCTGAAGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR GCA 90 bp | GACATGCTCAAAGGGACCAGACCCTGCTGGTTTCTCCCCACGGAATCCAGCCACTGCACAGAGAATATCTaGTGCTTGTTGACAGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DMLKGTRPCWFLPTESSHCTENI*CLLTAW Trigger: CCAGGCTGTCAACAAGCAGCAGATATTCTCTGTGCA...GTGGCTGGATTCCGTGGGGAGAAACCAGCAGGGTCTGGTCCCTTTGAGCATGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR GCA 90 bp | TGGGACACAGACAAACCACTTTGGGAGGGACAGGGATGCCTGCAACTCCAGCTTTCGCTGAGCCCCTTCTaGACAGAGAATATCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: WDTDKPLWEGQGCLQLQLSLSPF*TENICC Trigger: GCAGCAGATATTCTCTGTGCAGAAGGGGCTCAGCGA...AAGCTGGAGTTGCAGGCATCCCTGTCCCTCCCAAAGTGGTTTGTCTGTGTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR GCA 90 bp | TGTTCAAGGGTATCTGGGGCACTCCTGGTACTTTCTTCAGGGGTCAGCATATCTTGCCTGGGTGCCTGGTaGTGGGTGGATCTTGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CSRVSGALLVLSSGVSISCLGAW*WVDLVL Trigger: GAGGACAAGATCCACCCAGCACCAGGCACCCAGGCA...AGATATGCTGACCCCTGAAGAAAGTACCAGGAGTGCCCCAGATACCCTTGAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR CCA 90 bp | TCTTTGCTGATGAACCGGGTACAGATGACCATGCAGGCAATACCCAGGAGCTGCCACCTGCACAGGCTTTaGCCAAAGCCAGCTGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLLMNRVQMTMQAIPRSCHLHRL*PKPAVL Trigger: AAGCACAGCTGGCTTTGGCCAAAGCCTGTGCAGGTG...GCAGCTCCTGGGTATTGCCTGCATGGTCATCTGTACCCGGTTCATCAGCAAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234541.2 |
||
| CDS-3UTR CCA 90 bp | TGTTCAAGGGTATCTGGGGCACTCCTGGTACTTTCTTCAGGGGTCAGCATATCTGAGGCCTGGAAGAGCTaGCAGACCGACTCACTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CSRVSGALLVLSSGVSISEAWKS*QTDSLQ Trigger: CTGCAGTGAGTCGGTCTGCCAGCTCTTCCAGGCCTC...AGATATGCTGACCCCTGAAGAAAGTACCAGGAGTGCCCCAGATACCCTTGAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR TCA 90 bp | AGACAAACCACTTTGGGAGGGACAGGGATGCCTGCAACTCCAGCTTTAAGGGCCGCACCTCTTCCCGGCTaGTTTCCTCATAGCACTTAT | + |
|
Preference number: 4 (lower is better) Translates to: RQTTLGGTGMPATPALRAAPLPG*FPHSTY Trigger: ATAAGTGCTATGAGGAAATCAGCCGGGAAGAGGTGC...GGCCCTTAAAGCTGGAGTTGCAGGCATCCCTGTCCCTCCCAAAGTGGTTTGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR TCA 90 bp | CATGCTCCCGGAGACAACAGGACACAGAAGGGTAGACAGGGATGGGTTTCACAGAACAGAGGAGTATCCTaGGGTCGTAATGTCCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HAPGDNRTQKGRQGWVSQNRGVS*GRNVLG Trigger: GCCAAGGACATTACGACCTCAGGATACTCCTCTGTT...CTGTGAAACCCATCCCTGTCTACCCTTCTGTGTCCTGTTGTCTCCGGGAGCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR GCA 90 bp | TGGGACACAGACAAACCACTTTGGGAGGGACAGGGATGCCTGCAACTCCAGCTTAAAAGGCTACGCGCCTaGTTCCTTTTCTCTTCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: WDTDKPLWEGQGCLQLQLKRLRA*FLFSSS Trigger: GGACGAAGAGAAAAGGAAGCAGGCGCGTAGCCTTTT...AAGCTGGAGTTGCAGGCATCCCTGTCCCTCCCAAAGTGGTTTGTCTGTGTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR GCA 90 bp | ATGGGTTTGTACTTGTTCAAGGGTATCTGGGGCACTCCTGGTACTTTCTTCAGGAGGAAGCTGCACAGGTaGTGGGTTCTGGGTGCGACG | + |
|
Preference number: 4 (lower is better) Translates to: MGLYLFKGIWGTPGTFFRRKLHR*WVLGAT Trigger: CGTCGCACCCAGAACCCAGCACCTGTGCAGCTTCCT...CCTGAAGAAAGTACCAGGAGTGCCCCAGATACCCTTGAACAAGTACAAACCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR CCA 90 bp | TGTTCAAGGGTATCTGGGGCACTCCTGGTACTTTCTTCAGGGGTCAGCATATCTGCTGCAGCTTGTATCTaGGGACCAGCCTCCTTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: CSRVSGALLVLSSGVSISAAACI*GPASFA Trigger: TGCGAAGGAGGCTGGTCCCCAGATACAAGCTGCAGC...AGATATGCTGACCCCTGAAGAAAGTACCAGGAGTGCCCCAGATACCCTTGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR CCA 90 bp | CATGCTCCCGGAGACAACAGGACACAGAAGGGTAGACAGGGATGGGTTTCACAGTCATCACTGGACTCCTaGCAGCAATGTTCTTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: HAPGDNRTQKGRQGWVSQSSLDS*QQCSSG Trigger: CCCAGAAGAACATTGCTGCCAGGAGTCCAGTGATGA...CTGTGAAACCCATCCCTGTCTACCCTTCTGTGTCCTGTTGTCTCCGGGAGCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| 3UTR CAA 72 bp | CCCCACTGGTCTAAAACAAGACTTGCCAGCAAGGGTTaGAACTGTGTTAGGCCACCTGGGCCGCTAGTATTC | + |
|
Preference number: 4 (lower is better) Translates to: PHWSKTRLASKG*NCVRPPGPLVF Trigger: GAATACTAGCGGCCCAGGTGGCCTAACACAGTTCAAACCCTTGCTGGCAAGTCTTGTTTTAGACCAGTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR TCA 90 bp | GTGCAGGCTGGAAGTGGGCTGAGATCTTCTTGTGTGTGTGAATCTATATATTTGGCAGCTTCCGGACACTaGCCACGGTGGGCGGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: VQAGSGLRSSCVCESIYLAASGH*PRWADE Trigger: TTCATCCGCCCACCGTGGTCAGTGTCCGGAAGCTGC...CAAATATATAGATTCACACACACAAGAAGATCTCAGCCCACTTCCAGCCTGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR TCA 90 bp | ATGGGTTTGTACTTGTTCAAGGGTATCTGGGGCACTCCTGGTACTTTCTTCAGGTCGCAGCGTAGTCCCTaGGTTTCCGGAAGCTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: MGLYLFKGIWGTPGTFFRSQRSP*VSGSCG Trigger: TCCACAGCTTCCGGAAACTCAGGGACTACGCTGCGA...CCTGAAGAAAGTACCAGGAGTGCCCCAGATACCCTTGAACAAGTACAAACCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR TCA 90 bp | CCATTCGGGAACCATGAACAAGATGGGAGGAAAGGGATAATTACCACTCATGCAGTGAGGTCCCACAGATaGGTGGTCCAGGGCTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PFGNHEQDGRKGIITTHAVRSHR*VVQGCV Trigger: GACACAGCCCTGGACCACTCATCTGTGGGACCTCAC...TGCATGAGTGGTAATTATCCCTTTCCTCCCATCTTGTTCATGGTTCCCGAATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR TCA 90 bp | TGTTCAAGGGTATCTGGGGCACTCCTGGTACTTTCTTCAGGGGTCAGCATATCTTGTAGGAGAAGCCAGTaGGGTCCCACAGATGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CSRVSGALLVLSSGVSISCRRSQ*GPTDEW Trigger: CCACTCATCTGTGGGACCTCACTGGCTTCTCCTACA...AGATATGCTGACCCCTGAAGAAAGTACCAGGAGTGCCCCAGATACCCTTGAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR TCA 90 bp | CAAGGAGGCTGTCAGCTCCTGGCCTCAGAAAGTGAATGCCAACACAGAGGCTCATGGAAACACTTCTTATaGAGGCTCAGGACACAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QGGCQLLASESECQHRGSWKHFL*RLRTQG Trigger: ACCCTGTGTCCTGAGCCTTCATAAGAAGTGTTTCCA...TGAGCCTCTGTGTTGGCATTCACTTTCTGAGGCCAGGAGCTGACAGCCTCCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR GCA 90 bp | AGAGAGCTAATGGGTTTGTACTTGTTCAAGGGTATCTGGGGCACTCCTGGTACTGCTCACAGAGGAAGCTaGACAGGTGCTGGGTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RELMGLYLFKGIWGTPGTAHRGS*TGAGFW Trigger: CCAGAACCCAGCACCTGTGCAGCTTCCTCTGTGAGC...AGTACCAGGAGTGCCCCAGATACCCTTGAACAAGTACAAACCCATTAGCTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR GCA 90 bp | AGAGAGCTAATGGGTTTGTACTTGTTCAAGGGTATCTGGGGCACTCCTGGTACTATGGACAGGCTGGTGTaGAGCAGGGTGAGCTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: RELMGLYLFKGIWGTPGTMDRLV*SRVSSQ Trigger: CTGTGAGCTCACCCTGCTGCACACCAGCCTGTCCAT...AGTACCAGGAGTGCCCCAGATACCCTTGAACAAGTACAAACCCATTAGCTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR GCA 90 bp | TGGGTGGCTGCTGTCCAACACGTAGAGGCTGAGCTGGTCACTGAGCTCAGTGTCTCTGTAGTCTTTGGGTaGATCATCGTGGAAACACTT | + |
|
Preference number: 4 (lower is better) Translates to: WVAAVQHVEAELVTELSVSVVFG*IIVETL Trigger: AAGTGTTTCCACGATGATGCACCCAAAGACTACAGA...GACACTGAGCTCAGTGACCAGCTCAGCCTCTACGTGTTGGACAGCAGCCACCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR CCA 90 bp | TGTTCAAGGGTATCTGGGGCACTCCTGGTACTTTCTTCAGGGGTCAGCATATCTCACCTGCACAGGCTTTaGCCAAAGCCAGCTGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: CSRVSGALLVLSSGVSISHLHRL*PKPAVL Trigger: AAGCACAGCTGGCTTTGGCCAAAGCCTGTGCAGGTG...AGATATGCTGACCCCTGAAGAAAGTACCAGGAGTGCCCCAGATACCCTTGAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR CCA 90 bp | CAAGGAGGCTGTCAGCTCCTGGCCTCAGAAAGTGAATGCCAACACAGAGGCTCAGTAAACATGACTTCTTaGCCTGATGGTGGCAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QGGCQLLASESECQHRGSVNMTS*PDGGKA Trigger: AGCCTTGCCACCATCAGGCCAAGAAGTCATGTTTAC...TGAGCCTCTGTGTTGGCATTCACTTTCTGAGGCCAGGAGCTGACAGCCTCCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR TCA 90 bp | GTGCAGGCTGGAAGTGGGCTGAGATCTTCTTGTGTGTGTGAATCTATATATTTGTGGTGTGCAGCAGGGTaGGCTCACAGAGGAAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VQAGSGLRSSCVCESIYLWCAAG*AHRGSC Trigger: GCAGCTTCCTCTGTGAGCTCACCCTGCTGCACACCA...CAAATATATAGATTCACACACACAAGAAGATCTCAGCCCACTTCCAGCCTGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR GCA 90 bp | ATGGGTTTGTACTTGTTCAAGGGTATCTGGGGCACTCCTGGTACTTTCTTCAGGCTGGAAGCTGGCAGATaGCCACACACTGGCATGGTT | + |
|
Preference number: 4 (lower is better) Translates to: MGLYLFKGIWGTPGTFFRLEAGR*PHTGMV Trigger: AACCATGCCAGTGTGTGGGCATCTGCCAGCTTCCAG...CCTGAAGAAAGTACCAGGAGTGCCCCAGATACCCTTGAACAAGTACAAACCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR CCA 90 bp | CAAGGAGGCTGTCAGCTCCTGGCCTCAGAAAGTGAATGCCAACACAGAGGCTCACTGGGAGACTCAAGATaGTTAAGTTTCTGGGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QGGCQLLASESECQHRGSLGDSR*LSFWVF Trigger: GAAGACCCAGAAACTTAACCATCTTGAGTCTCCCAG...TGAGCCTCTGTGTTGGCATTCACTTTCTGAGGCCAGGAGCTGACAGCCTCCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| 3UTR CAA 72 bp | GGTCACATGGATACAATGGGACACAGACAAACCACTTaGGGAGGGACAGGGATGCCTGCAACTCCAGCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: GHMDTMGHRQTT*GGTGMPATPAL Trigger: TAAAGCTGGAGTTGCAGGCATCCCTGTCCCTCCCAAAGTGGTTTGTCTGTGTCCCATTGTATCCATGTGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| 3UTR CAA 72 bp | GTGAGCCACACAGCCTCTCTAATCGTCAGAATCTCTTaGCTGATGAACCGGGTACAGATGACCATGCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VSHTASLIVRIS*LMNRVQMTMQA Trigger: TGCCTGCATGGTCATCTGTACCCGGTTCATCAGCAAAGAGATTCTGACGATTAGAGAGGCTGTGTGGCTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234541.2 |
||
| CDS-3UTR TCA 90 bp | GTGCAGGCTGGAAGTGGGCTGAGATCTTCTTGTGTGTGTGAATCTATATATTTGTGTCCACCAGGTACTTaGGGTGGGAGTGGACAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VQAGSGLRSSCVCESIYLCPPGT*GGSGQL Trigger: GAGCTGTCCACTCCCACCTCAAGTACCTGGTGGACA...CAAATATATAGATTCACACACACAAGAAGATCTCAGCCCACTTCCAGCCTGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR TCA 90 bp | ATCGTCAGAATCTCTTTGCTGATGAACCGGGTACAGATGACCATGCAGGCAATAATATCTGCTGCTTGTTaGCAGCCTGGGAGGCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: IVRISLLMNRVQMTMQAIISAAC*QPGRPG Trigger: TCCAGGCCTCCCAGGCTGTCAACAAGCAGCAGATAT...TATTGCCTGCATGGTCATCTGTACCCGGTTCATCAGCAAAGAGATTCTGACGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234541.2 |
||
| CDS-3UTR GCA 90 bp | CCATTCGGGAACCATGAACAAGATGGGAGGAAAGGGATAATTACCACTCATGCATTGTGCTTGAGTGGCTaGCCACAGAGAGCACTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PFGNHEQDGRKGIITTHALCLSG*PQRALR Trigger: CCTCAGTGCTCTCTGTGGGCAGCCACTCAAGCACAA...TGCATGAGTGGTAATTATCCCTTTCCTCCCATCTTGTTCATGGTTCCCGAATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR CCA 90 bp | CATGCTCAAAGGGACCAGACCCTGCTGGTTTCTCCCCACGGAATCCAGCCACAACCAAGCAGTGTAGTATaGAAGCTTTATGACTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HAQRDQTLLVSPHGIQPQPSSVV*KLYDFS Trigger: AGAGAAGTCATAAAGCTTCCATACTACACTGCTTGG...TTGTGGCTGGATTCCGTGGGGAGAAACCAGCAGGGTCTGGTCCCTTTGAGCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR CCA 90 bp | GTGCAGGCTGGAAGTGGGCTGAGATCTTCTTGTGTGTGTGAATCTATATATTTGGAGCTGAGGAAGGTGTaGATCTCCCCTGAGCTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VQAGSGLRSSCVCESIYLELRKV*ISPELG Trigger: CCCTAGCTCAGGGGAGATCCACACCTTCCTCAGCTC...CAAATATATAGATTCACACACACAAGAAGATCTCAGCCCACTTCCAGCCTGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR TCA 90 bp | GTGCAGGCTGGAAGTGGGCTGAGATCTTCTTGTGTGTGTGAATCTATATATTTGTGCGCAGGCCTCATCTaGCACAGACAGGCCTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: VQAGSGLRSSCVCESIYLCAGLI*HRQAFI Trigger: AATGAAGGCCTGTCTGTGTCAGATGAGGCCTGCGCA...CAAATATATAGATTCACACACACAAGAAGATCTCAGCCCACTTCCAGCCTGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR TCA 90 bp | AGAGAGCTAATGGGTTTGTACTTGTTCAAGGGTATCTGGGGCACTCCTGGTACTCACTCCACAGTCAGGTaGAGACACAGGCTTGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RELMGLYLFKGIWGTPGTHSTVR*RHRLVK Trigger: CTTTACAAGCCTGTGTCTTCACCTGACTGTGGAGTG...AGTACCAGGAGTGCCCCAGATACCCTTGAACAAGTACAAACCCATTAGCTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR CCA 90 bp | GTGCAGGCTGGAAGTGGGCTGAGATCTTCTTGTGTGTGTGAATCTATATATTTGGTGGATCTTGTCCTCTaGCCAGGCCTCCTCATCACT | + |
|
Preference number: 4 (lower is better) Translates to: VQAGSGLRSSCVCESIYLVDLVL*PGLLIT Trigger: AGTGATGAGGAGGCCTGGCCAGAGGACAAGATCCAC...CAAATATATAGATTCACACACACAAGAAGATCTCAGCCCACTTCCAGCCTGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| 3UTR CAA 72 bp | TCCACCAACCAGTCGATTAGAATGTACCTTTGGGTGTaGGTTCTCTTCTTCCACGACATAGGTCCTGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: STNQSIRMYLWV*VLFFHDIGPGN Trigger: GTTCCCAGGACCTATGTCGTGGAAGAAGAGAACCAACACCCAAAGGTACATTCTAATCGACTGGTTGGTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234541.2 |
||
| CDS-3UTR TCA 90 bp | AGAGAGCTAATGGGTTTGTACTTGTTCAAGGGTATCTGGGGCACTCCTGGTACTAAAGGAGGTATGAGCTaGTTAAGCATCCCTGACGAG | + |
|
Preference number: 4 (lower is better) Translates to: RELMGLYLFKGIWGTPGTKGGMS*LSIPDE Trigger: CTCGTCAGGGATGCTTAATCAGCTCATACCTCCTTT...AGTACCAGGAGTGCCCCAGATACCCTTGAACAAGTACAAACCCATTAGCTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR TCA 90 bp | CTCCACAGTCAGGTGAAGACACAGGCTTGTAAAGTCCTTCATTGTGGCAACTTCAAAGGAGGTATGAGCTaGTTAAGCATCCCTGACGAG | + |
|
Preference number: 4 (lower is better) Translates to: LHSQVKTQACKVLHCGNFKGGMS*LSIPDE Trigger: CTCGTCAGGGATGCTTAATCAGCTCATACCTCCTTT...GAAGTTGCCACAATGAAGGACTTTACAAGCCTGTGTCTTCACCTGACTGTGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234541.2 |
||
| 3UTR CAA 72 bp | CCAGCAACTCTTCTGACTTCTCGCTCTCCTGCATCTTaGTGGCCTTGGGGATTACAAGTGATTGTTTATGGT | + |
|
Preference number: 4 (lower is better) Translates to: PATLLTSRSPAS*WPWGLQVIVYG Trigger: ACCATAAACAATCACTTGTAATCCCCAAGGCCACAAAGATGCAGGAGAGCGAGAAGTCAGAAGAGTTGCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| 3UTR CAA 72 bp | CATAGGGATGGAACAGAAAACAGAGAGCTAATGGGTTaGTACTTGTTCAAGGGTATCTGGGGCACTCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: HRDGTENRELMG*YLFKGIWGTPG Trigger: ACCAGGAGTGCCCCAGATACCCTTGAACAAGTACAAACCCATTAGCTCTCTGTTTTCTGTTCCATCCCTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR CCA 90 bp | CCATTCGGGAACCATGAACAAGATGGGAGGAAAGGGATAATTACCACTCATGCACTTGTCTGTAGTCTTTaGGTGCATCATCGTGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PFGNHEQDGRKGIITTHALVCSL*VHHRGN Trigger: GTTTCCACGATGATGCACCCAAAGACTACAGACAAG...TGCATGAGTGGTAATTATCCCTTTCCTCCCATCTTGTTCATGGTTCCCGAATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| 3UTR CAA 72 bp | GATGGAACAGAAAACAGAGAGCTAATGGGTTTGTACTaGTTCAAGGGTATCTGGGGCACTCCTGGTACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: DGTENRELMGLY*FKGIWGTPGTF Trigger: GAAAGTACCAGGAGTGCCCCAGATACCCTTGAACAAGTACAAACCCATTAGCTCTCTGTTTTCTGTTCCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| 3UTR CAA 72 bp | GGGCTGAGATCTTCTTGTGTGTGTGAATCTATATATTaGTATGCCACATGTAGACCTGGTGGCCACAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GLRSSCVCESIY*YATCRPGGHRG Trigger: ACCTCTGTGGCCACCAGGTCTACATGTGGCATACAAATATATAGATTCACACACACAAGAAGATCTCAGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR GCA 90 bp | GTAAAGTCCTTCATTGTGGCAACTTCCACCAACCAGTCGATTAGAATGTACCTTTGCACAGAGAATATCTaGTGCTTGTTGACAGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VKSFIVATSTNQSIRMYLCTENI*CLLTAW Trigger: CCAGGCTGTCAACAAGCAGCAGATATTCTCTGTGCA...AAGGTACATTCTAATCGACTGGTTGGTGGAAGTTGCCACAATGAAGGACTTTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234541.2 |
||
| CDS-3UTR GCA 90 bp | AGAGAGCTAATGGGTTTGTACTTGTTCAAGGGTATCTGGGGCACTCCTGGTACTTTACTCCTATTGTACTaGACAAGTCAGCATAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RELMGLYLFKGIWGTPGTLLLLY*TSQHSS Trigger: TGAGCTATGCTGACTTGTGCAGTACAATAGGAGTAA...AGTACCAGGAGTGCCCCAGATACCCTTGAACAAGTACAAACCCATTAGCTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR CCA 90 bp | CTTGTGTGTGTGAATCTATATATTTGTATGCCACATGTAGACCTGGTGGCCACAGCAGCAATGTTCTTCTaGGTTCAGGTAGACCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: LVCVNLYICMPHVDLVATAAMFF*VQVDHS Trigger: ACTGTGGTCTACCTGAACCCAGAAGAACATTGCTGC...TGTGGCCACCAGGTCTACATGTGGCATACAAATATATAGATTCACACACACAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS-3UTR CCA 90 bp | GTGCAGGCTGGAAGTGGGCTGAGATCTTCTTGTGTGTGTGAATCTATATATTTGGATAACAGAAACACTTaGCACACCTACAATGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: VQAGSGLRSSCVCESIYLDNRNT*HTYNGS Trigger: TGATCCATTGTAGGTGTGCCAAGTGTTTCTGTTATC...CAAATATATAGATTCACACACACAAGAAGATCTCAGCCCACTTCCAGCCTGCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS CCA 90 bp | CGCTTCCGTTTGCTCCTCCTCCCGGAGGGCGAGCTGAGGAAGGTGTaGATCTCCCCTGAGCTAGGGAAAGATGGGGGCTCTGGGCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RFRLLLLPEGELRKV*ISPELGKDGGSGLS Trigger: GGAAAGCCCAGAGCCCCCATCTTTCCCTAGCTCAGGGGAGATCCACACCTTCCTCAGCTCGCCCTCCGGGAGGAGGAGCAAACGGAAGCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
||
| CDS CCA 90 bp | CTGGTGTGCAGCAGGGTGAGCTCACAGAGGAAGCTGCACAGGTGCTaGGTTCTGGGTGCGACGGGGACCAGTGTCAGCAGGACCTCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: LVCSRVSSQRKLHRC*VLGATGTSVSRTSL Trigger: TAAAGAGGTCCTGCTGACACTGGTCCCCGTCGCACCCAGAACCCAGCACCTGTGCAGCTTCCTCTGTGAGCTCACCCTGCTGCACACCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS TCA 90 bp | CCAAAGCCAGCTGTGCTTCCCAGCAGCCTTTCGCAGCGTAGTCCCTaGGTTTCCGGAAGCTGTGGAGGCATCGTCCGGGGTCGGACATAT | + |
|
Preference number: 5 (lower is better) Translates to: PKPAVLPSSLSQRSP*VSGSCGGIVRGRTY Trigger: ATATGTCCGACCCCGGACGATGCCTCCACAGCTTCCGGAAACTCAGGGACTACGCTGCGAAAGGCTGCTGGGAAGCACAGCTGGCTTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115390.5 ENSMUST00000234541.2 |
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| CDS GCA 90 bp | CTCCCTCATAGCCAGAGCAGCACTCCAGGCTCCAGTCCAGAAGGCTaGCTAGCAGTGTCTCCTCCTGATTCGATAGCTCTGCGGTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LPHSQSSTPGSSPEG*LAVSPPDSIALRWV Trigger: CACCCACCGCAGAGCTATCGAATCAGGAGGAGACACTGCTAGGCAGCCTTCTGGACTGGAGCCTGGAGTGCTGCTCTGGCTATGAGGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS CCA 90 bp | GAAGGCCACAGCTCCTGGAAGCTGGCAGATGCCCACACACTGGCATaGTTGTCCACCAGGTACTTGAGGTGGGAGTGGACAGCTCGGACA | + |
|
Preference number: 5 (lower is better) Translates to: EGHSSWKLADAHTLA*LSTRYLRWEWTART Trigger: TGTCCGAGCTGTCCACTCCCACCTCAAGTACCTGGTGGACAACCATGCCAGTGTGTGGGCATCTGCCAGCTTCCAGGAGCTGTGGCCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS-3UTR CAA 90 bp | CATGACAGCTGGGTGGCTGCTGTCCAACACGTAGAGGCTGAGCTGGTCACTGAGTTTTCTCGCTTCCGTTaGCTCCTCCTCCCGGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: HDSWVAAVQHVEAELVTEFSRFR*LLLPEG Trigger: GCCCTCCGGGAGGAGGAGCAAACGGAAGCGAGAAAA...CTCAGTGACCAGCTCAGCCTCTACGTGTTGGACAGCAGCCACCCAGCTGTCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS TCA 90 bp | CACTCCAGGCTCCAGTCCAGAAGGCTGCCTAGCAGTGTCTCCTCCTaGTTCGATAGCTCTGCGGTGGGTGTGGTGACAAAGCTGCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: HSRLQSRRLPSSVSS*FDSSAVGVVTKLPL Trigger: CAGAGGCAGCTTTGTCACCACACCCACCGCAGAGCTATCGAATCAGGAGGAGACACTGCTAGGCAGCCTTCTGGACTGGAGCCTGGAGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS-3UTR CAA 90 bp | TGGGACACAGACAAACCACTTTGGGAGGGACAGGGATGCCTGCAACTCCAGCTTCCCAGGAGCTGCAGCTaGTATCTGGGGACCAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: WDTDKPLWEGQGCLQLQLPRSCS*YLGTSL Trigger: GAGGCTGGTCCCCAGATACAAGCTGCAGCTCCTGGG...AAGCTGGAGTTGCAGGCATCCCTGTCCCTCCCAAAGTGGTTTGTCTGTGTCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS-3UTR CAA 90 bp | TGGGTGGCTGCTGTCCAACACGTAGAGGCTGAGCTGGTCACTGAGCTCAGTGTCCGCTCTCTGGGGAGTTaGGGGGACGACACTGTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: WVAAVQHVEAELVTELSVRSLGS*GDDTVN Trigger: GTTTACAGTGTCGTCCCCCAAACTCCCCAGAGAGCG...GACACTGAGCTCAGTGACCAGCTCAGCCTCTACGTGTTGGACAGCAGCCACCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS GCA 90 bp | TACCTCATGGTGTCGCTGAGCCCCTTCTGCACAGAGAATATCTGCTaGTTGTTGACAGCCTGGGAGGCCTGGAAGAGCTGGCAGACCGAC | + |
|
Preference number: 5 (lower is better) Translates to: YLMVSLSPFCTENIC*LLTAWEAWKSWQTD Trigger: GTCGGTCTGCCAGCTCTTCCAGGCCTCCCAGGCTGTCAACAAGCAGCAGATATTCTCTGTGCAGAAGGGGCTCAGCGACACCATGAGGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS GCA 90 bp | GATCTCATGGTGTCGCTGAGCCCCTTCTGCACAGAGAATATCTGCTaGTTGTTGACAGCCTGGGAGGCCTGGAAGAGCTGGCAGACCGAC | + |
|
Preference number: 5 (lower is better) Translates to: DLMVSLSPFCTENIC*LLTAWEAWKSWQTD Trigger: GTCGGTCTGCCAGCTCTTCCAGGCCTCCCAGGCTGTCAACAAGCAGCAGATATTCTCTGTGCAGAAGGGGCTCAGCGACACCATGAGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234541.2 |
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| CDS CCA 90 bp | GCCCTTTCAAAGAGCTTCAGGTTCTGTGGAGAAGGCCACAGCTCCTaGAAGCTGGCAGATGCCCACACACTGGCATGGTTGTCCACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ALSKSFRFCGEGHSS*KLADAHTLAWLSTR Trigger: CCTGGTGGACAACCATGCCAGTGTGTGGGCATCTGCCAGCTTCCAGGAGCTGTGGCCTTCTCCACAGAACCTGAAGCTCTTTGAAAGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS-3UTR CAA 90 bp | TTTGGGAGGGACAGGGATGCCTGCAACTCCAGCTTTAAGGGCCTCACACACCATCCACCTGCACAGGCTTaGGCCAAAGCCAGCTGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: FGRDRDACNSSFKGLTHHPPAQA*AKASCA Trigger: AGCACAGCTGGCTTTGGCCAAAGCCTGTGCAGGTGG...ATGGTGTGTGAGGCCCTTAAAGCTGGAGTTGCAGGCATCCCTGTCCCTCCCAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS GCA 90 bp | CATCTTACTGGCCCCAGTGATCTCATGGTGTCGCTGAGCCCCTTCTaGACAGAGAATATCTGCTGCTTGTTGACAGCCTGGGAGGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HLTGPSDLMVSLSPF*TENICCLLTAWEAW Trigger: CCAGGCCTCCCAGGCTGTCAACAAGCAGCAGATATTCTCTGTGCAGAAGGGGCTCAGCGACACCATGAGATCACTGGGGCCAGTAAGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234541.2 |
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| CDS CCA 90 bp | TGGCCAGGCCTCCTCATCACTGGACTCCTGGCAGCAATGTTCTTCTaGGTTCAGGTAGACCACAGTGACATCAAGGAGTCTGCTGGGAGC | + |
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Preference number: 5 (lower is better) Translates to: WPGLLITGLLAAMFF*VQVDHSDIKESAGS Trigger: GCTCCCAGCAGACTCCTTGATGTCACTGTGGTCTACCTGAACCCAGAAGAACATTGCTGCCAGGAGTCCAGTGATGAGGAGGCCTGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS TCA 90 bp | CTAGCAGTGTCTCCTCCTGATTCGATAGCTCTGCGGTGGGTGTGGTaGCAAAGCTGCCTCTGTCCTCCTGAAGGCTGTTTTCTCGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LAVSPPDSIALRWVW*QSCLCPPEGCFLAS Trigger: GGAAGCGAGAAAACAGCCTTCAGGAGGACAGAGGCAGCTTTGTCACCACACCCACCGCAGAGCTATCGAATCAGGAGGAGACACTGCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS TCA 90 bp | TCTGGGGAGTTTGGGGGACGACACTGTAAACATGACTTCTTGGCCTaGTGGTGGCAAGGCTTTGTGCTTGAGTGGCTGCCCACAGAGAGC | + |
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Preference number: 5 (lower is better) Translates to: SGEFGGRHCKHDFLA*WWQGFVLEWLPTES Trigger: GCTCTCTGTGGGCAGCCACTCAAGCACAAAGCCTTGCCACCATCAGGCCAAGAAGTCATGTTTACAGTGTCGTCCCCCAAACTCCCCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS-3UTR CAA 90 bp | TTTGGGAGGGACAGGGATGCCTGCAACTCCAGCTTTAAGGGCCTCACACACCATAATATCTGCTGCTTGTaGACAGCCTGGGAGGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: FGRDRDACNSSFKGLTHHNICCL*TAWEAW Trigger: CCAGGCCTCCCAGGCTGTCAACAAGCAGCAGATATT...ATGGTGTGTGAGGCCCTTAAAGCTGGAGTTGCAGGCATCCCTGTCCCTCCCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS-3UTR CAA 90 bp | CAAGGAGGCTGTCAGCTCCTGGCCTCAGAAAGTGAATGCCAACACAGAGGCTCAGGCCGTCAGAGAGACTaGTCTGTAGTCTTTGGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: QGGCQLLASESECQHRGSGRQRD*SVVFGC Trigger: GCACCCAAAGACTACAGACAAGTCTCTCTGACGGCC...TGAGCCTCTGTGTTGGCATTCACTTTCTGAGGCCAGGAGCTGACAGCCTCCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS-3UTR CAA 90 bp | ATGGGTTTGTACTTGTTCAAGGGTATCTGGGGCACTCCTGGTACTTTCTTCAGGGCCCGATCTCCCCGATaGCAGAGAAGGGGCCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: MGLYLFKGIWGTPGTFFRARSPR*QRRGLG Trigger: TCCCAGGCCCCTTCTCTGCAATCGGGGAGATCGGGC...CCTGAAGAAAGTACCAGGAGTGCCCCAGATACCCTTGAACAAGTACAAACCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS-3UTR CAA 90 bp | CAGGCTTCAGCAGACACCCCAGGTGTTGAGGACAGCTGCCTCATAAATCACAAGGGCAAGGCTTTGTGCTaGAGTGGCTGCCCACAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: QASADTPGVEDSCLINHKGKALC*SGCPQR Trigger: TCTCTGTGGGCAGCCACTCAAGCACAAAGCCTTGCC...CTTGTGATTTATGAGGCAGCTGTCCTCAACACCTGGGGTGTCTGCTGAAGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS-3UTR CAA 90 bp | CAGAATCTCTTTGCTGATGAACCGGGTACAGATGACCATGCAGGCAATACCCAGCCACCTGCACAGGCTTaGGCCAAAGCCAGCTGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: QNLFADEPGTDDHAGNTQPPAQA*AKASCA Trigger: AGCACAGCTGGCTTTGGCCAAAGCCTGTGCAGGTGG...CTGGGTATTGCCTGCATGGTCATCTGTACCCGGTTCATCAGCAAAGAGATTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234541.2 |
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| CDS-3UTR CAA 90 bp | CCATTCGGGAACCATGAACAAGATGGGAGGAAAGGGATAATTACCACTCATGCAGGTGCTGGGTGGATCTaGTCCTCTGGCCAGGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PFGNHEQDGRKGIITTHAGAGWI*SSGQAS Trigger: GGAGGCCTGGCCAGAGGACAAGATCCACCCAGCACC...TGCATGAGTGGTAATTATCCCTTTCCTCCCATCTTGTTCATGGTTCCCGAATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS GCA 90 bp | AACCAGTCGATTAGAATGTACCTCATGGTGTCGCTGAGCCCCTTCTaGACAGAGAATATCTGCTGCTTGTTGACAGCCTGGGAGGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: NQSIRMYLMVSLSPF*TENICCLLTAWEAW Trigger: CCAGGCCTCCCAGGCTGTCAACAAGCAGCAGATATTCTCTGTGCAGAAGGGGCTCAGCGACACCATGAGGTACATTCTAATCGACTGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS TCA 90 bp | CTATTGTACTGCACAAGTCAGCATAGCTCAGCACCTCTTCCCGGCTaGTTTCCTCATAGCACTTATCCTCGAACCTCTGCTTCACGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LLYCTSQHSSAPLPG*FPHSTYPRTSASRP Trigger: CGGCCGTGAAGCAGAGGTTCGAGGATAAGTGCTATGAGGAAATCAGCCGGGAAGAGGTGCTGAGCTATGCTGACTTGTGCAGTACAATAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS CCA 90 bp | CGAACCTCTGCTTCACGGCCGTCAGAGAGACTTGTCTGTAGTCTTTaGGTGCATCATCGTGGAAACACTTCTTATGAAGGCTCAGGACAC | + |
|
Preference number: 5 (lower is better) Translates to: RTSASRPSERLVCSL*VHHRGNTSYEGSGH Trigger: GTGTCCTGAGCCTTCATAAGAAGTGTTTCCACGATGATGCACCCAAAGACTACAGACAAGTCTCTCTGACGGCCGTGAAGCAGAGGTTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS-3UTR CAA 90 bp | CCATTCGGGAACCATGAACAAGATGGGAGGAAAGGGATAATTACCACTCATGCAGATGGTGGCAAGGCTTaGTGCTTGAGTGGCTGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: PFGNHEQDGRKGIITTHADGGKA*CLSGCP Trigger: TGGGCAGCCACTCAAGCACAAAGCCTTGCCACCATC...TGCATGAGTGGTAATTATCCCTTTCCTCCCATCTTGTTCATGGTTCCCGAATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS TCA 90 bp | CGGACATATCCACCTTTCTGTCGCTTTCCCAAAGGAGGTATGAGCTaGTTAAGCATCCCTGACGAGAAGACTCTTCCAAAAGGCTACGCG | + |
|
Preference number: 5 (lower is better) Translates to: RTYPPFCRFPKGGMS*LSIPDEKTLPKGYA Trigger: CGCGTAGCCTTTTGGAAGAGTCTTCTCGTCAGGGATGCTTAATCAGCTCATACCTCCTTTGGGAAAGCGACAGAAAGGTGGATATGTCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115390.5 ENSMUST00000234541.2 |
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| CDS-3UTR CAA 90 bp | CCATTCGGGAACCATGAACAAGATGGGAGGAAAGGGATAATTACCACTCATGCACACACACTGGCATGGTaGTCCACCAGGTACTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PFGNHEQDGRKGIITTHAHTLAW*STRYLR Trigger: CCTCAAGTACCTGGTGGACAACCATGCCAGTGTGTG...TGCATGAGTGGTAATTATCCCTTTCCTCCCATCTTGTTCATGGTTCCCGAATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS TCA 90 bp | TTTCTGTCGCTTTCCCAAAGGAGGTATGAGCTGATTAAGCATCCCTaGCGAGAAGACTCTTCCAAAAGGCTACGCGCCTGCTTCCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FLSLSQRRYELIKHP*REDSSKRLRACFLF Trigger: GAAAAGGAAGCAGGCGCGTAGCCTTTTGGAAGAGTCTTCTCGTCAGGGATGCTTAATCAGCTCATACCTCCTTTGGGAAAGCGACAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115390.5 ENSMUST00000234541.2 |
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| CDS CCA 90 bp | CTTCGTCCTCAAAAAGATTTAGCACCCTTCCCAAGCAGTGTAGTATaGAAGCTTTATGACTTCTCTGTAACTGACACTCCGCTCGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LRPQKDLAPFPSSVV*KLYDFSVTDTPLGG Trigger: GCCTCCGAGCGGAGTGTCAGTTACAGAGAAGTCATAAAGCTTCCATACTACACTGCTTGGGAAGGGTGCTAAATCTTTTTGAGGACGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS-3UTR CAA 90 bp | AGAGAGCTAATGGGTTTGTACTTGTTCAAGGGTATCTGGGGCACTCCTGGTACTTTTCTGGGTCTTCTTTaGATTCTTCGTTTAGTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: RELMGLYLFKGIWGTPGTFLGLL*ILRLVG Trigger: TCCTACTAAACGAAGAATCAAAAGAAGACCCAGAAA...AGTACCAGGAGTGCCCCAGATACCCTTGAACAAGTACAAACCCATTAGCTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS GCA 72 bp | TGCAGCAGGGTGAGCTCACAGAGGAAGCTGCACAGGTaGTGGGTTCTGGGTGCGACGGGGACCAGTGTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: CSRVSSQRKLHR*WVLGATGTSVS Trigger: GCTGACACTGGTCCCCGTCGCACCCAGAACCCAGCACCTGTGCAGCTTCCTCTGTGAGCTCACCCTGCTGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS TCA 72 bp | GCTGTGCTTCCCAGCAGCCTTTCGCAGCGTAGTCCCTaGGTTTCCGGAAGCTGTGGAGGCATCGTCCGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: AVLPSSLSQRSP*VSGSCGGIVRG Trigger: ACCCCGGACGATGCCTCCACAGCTTCCGGAAACTCAGGGACTACGCTGCGAAAGGCTGCTGGGAAGCACAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115390.5 ENSMUST00000234541.2 |
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| CDS GCA 72 bp | CCTGGGAGGCCTGGAAGAGCTGGCAGACCGACTCACTaGAGGCCTTCCCTTCCAGTCCAAGTTGGCTTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: PGRPGRAGRPTH*RPSLPVQVGFH Trigger: GTGGAAGCCAACTTGGACTGGAAGGGAAGGCCTGCAGTGAGTCGGTCTGCCAGCTCTTCCAGGCCTCCCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115390.5 ENSMUST00000234541.2 |
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| CDS GCA 72 bp | GCAGGCCTTCCCTTCCAGTCCAAGTTGGCTTCCACCTaGACAGGCTTTGGCCAAAGCCAGCTGTGCTTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: AGLPFQSKLAST*TGFGQSQLCFP Trigger: TGGGAAGCACAGCTGGCTTTGGCCAAAGCCTGTGCAGGTGGAAGCCAACTTGGACTGGAAGGGAAGGCCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115390.5 ENSMUST00000234541.2 |
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| CDS CAA 72 bp | GACCGACTCACTGCAGGCCTTCCCTTCCAGTCCAAGTaGGCTTCCACCTGCACAGGCTTTGGCCAAAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: DRLTAGLPFQSK*ASTCTGFGQSQ Trigger: CTGGCTTTGGCCAAAGCCTGTGCAGGTGGAAGCCAACTTGGACTGGAAGGGAAGGCCTGCAGTGAGTCGGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115390.5 ENSMUST00000234541.2 |
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| CDS CAA 90 bp | GGACTCGAGCTGCTAACAGAGGAGTATCCTGAGGTCGTAATGTCCTaGGCCCGATCTCCCCGATTGCAGAGAAGGGGCCTGGGAGCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: GLELLTEEYPEVVMS*ARSPRLQRRGLGAE Trigger: CTCAGCTCCCAGGCCCCTTCTCTGCAATCGGGGAGATCGGGCCAAGGACATTACGACCTCAGGATACTCCTCTGTTAGCAGCTCGAGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS CAA 90 bp | ATGGTGTCGCTGAGCCCCTTCTGCACAGAGAATATCTGCTGCTTGTaGACAGCCTGGGAGGCCTGGAAGAGCTGGCAGACCGACTCACTG | + |
|
Preference number: 6 (lower is better) Translates to: MVSLSPFCTENICCL*TAWEAWKSWQTDSL Trigger: CAGTGAGTCGGTCTGCCAGCTCTTCCAGGCCTCCCAGGCTGTCAACAAGCAGCAGATATTCTCTGTGCAGAAGGGGCTCAGCGACACCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115390.5 ENSMUST00000234541.2 |
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| CDS CAA 90 bp | CTCATGGTGTCGCTGAGCCCCTTCTGCACAGAGAATATCTGCTGCTaGTTGACAGCCTGGGAGGCCTGGAAGAGCTGGCAGACCGACTCA | + |
|
Preference number: 6 (lower is better) Translates to: LMVSLSPFCTENICC*LTAWEAWKSWQTDS Trigger: TGAGTCGGTCTGCCAGCTCTTCCAGGCCTCCCAGGCTGTCAACAAGCAGCAGATATTCTCTGTGCAGAAGGGGCTCAGCGACACCATGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115390.5 ENSMUST00000234541.2 |
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| CDS TCA 72 bp | TCACCTCCACCTGCTGAGCCATCTTACTGGCCCCAGTaGTCTCATGGTGTCGCTGAGCCCCTTCTGCACAGA | + |
|
Preference number: 6 (lower is better) Translates to: SPPPAEPSYWPQ*SHGVAEPLLHR Trigger: TCTGTGCAGAAGGGGCTCAGCGACACCATGAGATCACTGGGGCCAGTAAGATGGCTCAGCAGGTGGAGGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234541.2 |
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| CDS GCA 72 bp | GTGTCGCTGAGCCCCTTCTGCACAGAGAATATCTGCTaGTTGTTGACAGCCTGGGAGGCCTGGAAGAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: VSLSPFCTENIC*LLTAWEAWKSW Trigger: CCAGCTCTTCCAGGCCTCCCAGGCTGTCAACAAGCAGCAGATATTCTCTGTGCAGAAGGGGCTCAGCGACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115390.5 ENSMUST00000234541.2 |
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| CDS GCA 72 bp | AGCCAGAGCAGCACTCCAGGCTCCAGTCCAGAAGGCTaGCTAGCAGTGTCTCCTCCTGATTCGATAGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SQSSTPGSSPEG*LAVSPPDSIAL Trigger: CAGAGCTATCGAATCAGGAGGAGACACTGCTAGGCAGCCTTCTGGACTGGAGCCTGGAGTGCTGCTCTGGCT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS CCA 72 bp | CACACACTGGCATGGTTGTCCACCAGGTACTTGAGGTaGGAGTGGACAGCTCGGACAGCAAGGATGTCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: HTLAWLSTRYLR*EWTARTARMSP Trigger: TGGGGACATCCTTGCTGTCCGAGCTGTCCACTCCCACCTCAAGTACCTGGTGGACAACCATGCCAGTGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS CCA 72 bp | AGCTCCTGGAAGCTGGCAGATGCCCACACACTGGCATaGTTGTCCACCAGGTACTTGAGGTGGGAGTGGACA | + |
|
Preference number: 6 (lower is better) Translates to: SSWKLADAHTLA*LSTRYLRWEWT Trigger: TGTCCACTCCCACCTCAAGTACCTGGTGGACAACCATGCCAGTGTGTGGGCATCTGCCAGCTTCCAGGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS CCA 72 bp | GAGAATATCTGCTGCTTGTTGACAGCCTGGGAGGCCTaGAAGAGCTGGCAGACCGACTCACTGCAGGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: ENICCLLTAWEA*KSWQTDSLQAF Trigger: GAAGGCCTGCAGTGAGTCGGTCTGCCAGCTCTTCCAGGCCTCCCAGGCTGTCAACAAGCAGCAGATATTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115390.5 ENSMUST00000234541.2 |
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| CDS CAA 72 bp | CTGAGCCCCTTCTGCACAGAGAATATCTGCTGCTTGTaGACAGCCTGGGAGGCCTGGAAGAGCTGGCAGACC | + |
|
Preference number: 6 (lower is better) Translates to: LSPFCTENICCL*TAWEAWKSWQT Trigger: GGTCTGCCAGCTCTTCCAGGCCTCCCAGGCTGTCAACAAGCAGCAGATATTCTCTGTGCAGAAGGGGCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115390.5 ENSMUST00000234541.2 |
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| CDS CAA 72 bp | TCGCTGAGCCCCTTCTGCACAGAGAATATCTGCTGCTaGTTGACAGCCTGGGAGGCCTGGAAGAGCTGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SLSPFCTENICC*LTAWEAWKSWQ Trigger: CTGCCAGCTCTTCCAGGCCTCCCAGGCTGTCAACAAGCAGCAGATATTCTCTGTGCAGAAGGGGCTCAGCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115390.5 ENSMUST00000234541.2 |
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| CDS TCA 72 bp | ATGCCCACACACTGGCATGGTTGTCCACCAGGTACTTaGGGTGGGAGTGGACAGCTCGGACAGCAAGGATGT | + |
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Preference number: 6 (lower is better) Translates to: MPTHWHGCPPGT*GGSGQLGQQGC Trigger: ACATCCTTGCTGTCCGAGCTGTCCACTCCCACCTCAAGTACCTGGTGGACAACCATGCCAGTGTGTGGGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS TCA 72 bp | CTCCAGTCCAGAAGGCTGCCTAGCAGTGTCTCCTCCTaGTTCGATAGCTCTGCGGTGGGTGTGGTGACAAAG | + |
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Preference number: 6 (lower is better) Translates to: LQSRRLPSSVSS*FDSSAVGVVTK Trigger: CTTTGTCACCACACCCACCGCAGAGCTATCGAATCAGGAGGAGACACTGCTAGGCAGCCTTCTGGACTGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS GCA 72 bp | ATGGTGTCGCTGAGCCCCTTCTGCACAGAGAATATCTaGTGCTTGTTGACAGCCTGGGAGGCCTGGAAGAGC | + |
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Preference number: 6 (lower is better) Translates to: MVSLSPFCTENI*CLLTAWEAWKS Trigger: GCTCTTCCAGGCCTCCCAGGCTGTCAACAAGCAGCAGATATTCTCTGTGCAGAAGGGGCTCAGCGACACCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115390.5 ENSMUST00000234541.2 |
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| CDS GCA 72 bp | GGCCCCAGTGATCTCATGGTGTCGCTGAGCCCCTTCTaGACAGAGAATATCTGCTGCTTGTTGACAGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: GPSDLMVSLSPF*TENICCLLTAW Trigger: CCAGGCTGTCAACAAGCAGCAGATATTCTCTGTGCAGAAGGGGCTCAGCGACACCATGAGATCACTGGGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234541.2 |
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| CDS CAA 72 bp | CTGCTAACAGAGGAGTATCCTGAGGTCGTAATGTCCTaGGCCCGATCTCCCCGATTGCAGAGAAGGGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: LLTEEYPEVVMS*ARSPRLQRRGL Trigger: CAGGCCCCTTCTCTGCAATCGGGGAGATCGGGCCAAGGACATTACGACCTCAGGATACTCCTCTGTTAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS CAA 90 bp | TTTGGCGCTTTACAGGCTGCTGGTGAACACCGCTCTCTGGGGAGTTaGGGGGACGACACTGTAAACATGACTTCTTGGCCTGATGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: FGALQAAGEHRSLGS*GDDTVNMTSWPDGG Trigger: GCCACCATCAGGCCAAGAAGTCATGTTTACAGTGTCGTCCCCCAAACTCCCCAGAGAGCGGTGTTCACCAGCAGCCTGTAAAGCGCCAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS TCA 72 bp | GGCCTTCAAGCCGTTCACTTCTGCGCAGGCCTCATCTaGCACAGACAGGCCTTCATTGTAGAGGTAGGCAAT | + |
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Preference number: 6 (lower is better) Translates to: GLQAVHFCAGLI*HRQAFIVEVGN Trigger: ATTGCCTACCTCTACAATGAAGGCCTGTCTGTGTCAGATGAGGCCTGCGCAGAAGTGAACGGCTTGAAGGCC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS TCA 72 bp | AGGGCTCAGAACCCGTATTCAGTCTCTCAGCCATGCTaGAGAAGCGAGAGGCCTTCAAGCCGTTCACTTCTG | + |
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Preference number: 6 (lower is better) Translates to: RAQNPYSVSQPC*RSERPSSRSLL Trigger: CAGAAGTGAACGGCTTGAAGGCCTCTCGCTTCTTCAGCATGGCTGAGAGACTGAATACGGGTTCTGAGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS TCA 72 bp | TCTCCTCCTGATTCGATAGCTCTGCGGTGGGTGTGGTaGCAAAGCTGCCTCTGTCCTCCTGAAGGCTGTTTT | + |
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Preference number: 6 (lower is better) Translates to: SPPDSIALRWVW*QSCLCPPEGCF Trigger: AAAACAGCCTTCAGGAGGACAGAGGCAGCTTTGTCACCACACCCACCGCAGAGCTATCGAATCAGGAGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS TCA 72 bp | GCTTATGGGACTCGAGCTGCTAACAGAGGAGTATCCTaGGGTCGTAATGTCCTTGGCCCGATCTCCCCGATT | + |
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Preference number: 6 (lower is better) Translates to: AYGTRAANRGVS*GRNVLGPISPI Trigger: AATCGGGGAGATCGGGCCAAGGACATTACGACCTCAGGATACTCCTCTGTTAGCAGCTCGAGTCCCATAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS GCA 72 bp | GGGGCTCTGGGCTTTCCTGTTTTACTCCTATTGTACTaGACAAGTCAGCATAGCTCAGCACCTCTTCCCGGC | + |
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Preference number: 6 (lower is better) Translates to: GALGFPVLLLLY*TSQHSSAPLPG Trigger: GCCGGGAAGAGGTGCTGAGCTATGCTGACTTGTGCAGTACAATAGGAGTAAAACAGGAAAGCCCAGAGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS CAA 72 bp | TTACAGGCTGCTGGTGAACACCGCTCTCTGGGGAGTTaGGGGGACGACACTGTAAACATGACTTCTTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: LQAAGEHRSLGS*GDDTVNMTSWP Trigger: AGGCCAAGAAGTCATGTTTACAGTGTCGTCCCCCAAACTCCCCAGAGAGCGGTGTTCACCAGCAGCCTGTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS TCA 72 bp | TGCACAAGTCAGCATAGCTCAGCACCTCTTCCCGGCTaGTTTCCTCATAGCACTTATCCTCGAACCTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: CTSQHSSAPLPG*FPHSTYPRTSA Trigger: AGCAGAGGTTCGAGGATAAGTGCTATGAGGAAATCAGCCGGGAAGAGGTGCTGAGCTATGCTGACTTGTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS CCA 72 bp | CTCCTCATCACTGGACTCCTGGCAGCAATGTTCTTCTaGGTTCAGGTAGACCACAGTGACATCAAGGAGTCT | + |
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Preference number: 6 (lower is better) Translates to: LLITGLLAAMFF*VQVDHSDIKES Trigger: AGACTCCTTGATGTCACTGTGGTCTACCTGAACCCAGAAGAACATTGCTGCCAGGAGTCCAGTGATGAGGAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS CAA 72 bp | ATCCTCGAACCTCTGCTTCACGGCCGTCAGAGAGACTaGTCTGTAGTCTTTGGGTGCATCATCGTGGAAACA | + |
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Preference number: 6 (lower is better) Translates to: ILEPLLHGRQRD*SVVFGCIIVET Trigger: TGTTTCCACGATGATGCACCCAAAGACTACAGACAAGTCTCTCTGACGGCCGTGAAGCAGAGGTTCGAGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS TCA 72 bp | CCAACCAGTCGATTAGAATGTACCTCATGGTGTCGCTaGGCCCCTTCTGCACAGAGAATATCTGCTGCTTGT | + |
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Preference number: 6 (lower is better) Translates to: PTSRLECTSWCR*APSAQRISAAC Trigger: ACAAGCAGCAGATATTCTCTGTGCAGAAGGGGCTCAGCGACACCATGAGGTACATTCTAATCGACTGGTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS GCA 72 bp | ATTAGAATGTACCTCATGGTGTCGCTGAGCCCCTTCTaGACAGAGAATATCTGCTGCTTGTTGACAGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: IRMYLMVSLSPF*TENICCLLTAW Trigger: CCAGGCTGTCAACAAGCAGCAGATATTCTCTGTGCAGAAGGGGCTCAGCGACACCATGAGGTACATTCTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS GCA 72 bp | CACGGCCGTCAGAGAGACTTGTCTGTAGTCTTTGGGTaGATCATCGTGGAAACACTTCTTATGAAGGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: HGRQRDLSVVFG*IIVETLLMKAQ Trigger: CTGAGCCTTCATAAGAAGTGTTTCCACGATGATGCACCCAAAGACTACAGACAAGTCTCTCTGACGGCCGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS CCA 72 bp | GCTTCACGGCCGTCAGAGAGACTTGTCTGTAGTCTTTaGGTGCATCATCGTGGAAACACTTCTTATGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: ASRPSERLVCSL*VHHRGNTSYEG Trigger: GCCTTCATAAGAAGTGTTTCCACGATGATGCACCCAAAGACTACAGACAAGTCTCTCTGACGGCCGTGAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS CAA 72 bp | AAGATGGGGGCTCTGGGCTTTCCTGTTTTACTCCTATaGTACTGCACAAGTCAGCATAGCTCAGCACCTCTT | + |
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Preference number: 6 (lower is better) Translates to: KMGALGFPVLLL*YCTSQHSSAPL Trigger: AAGAGGTGCTGAGCTATGCTGACTTGTGCAGTACAATAGGAGTAAAACAGGAAAGCCCAGAGCCCCCATCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS CAA 90 bp | ATAGCACTTATCCTCGAACCTCTGCTTCACGGCCGTCAGAGAGACTaGTCTGTAGTCTTTGGGTGCATCATCGTGGAAACACTTCTTATG | + |
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Preference number: 6 (lower is better) Translates to: IALILEPLLHGRQRD*SVVFGCIIVETLLM Trigger: CATAAGAAGTGTTTCCACGATGATGCACCCAAAGACTACAGACAAGTCTCTCTGACGGCCGTGAAGCAGAGGTTCGAGGATAAGTGCTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115390.5 |
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| CDS TCA 72 bp | CCACCTTTCTGTCGCTTTCCCAAAGGAGGTATGAGCTaGTTAAGCATCCCTGACGAGAAGACTCTTCCAAAA | + |
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Preference number: 6 (lower is better) Translates to: PPFCRFPKGGMS*LSIPDEKTLPK Trigger: TTTTGGAAGAGTCTTCTCGTCAGGGATGCTTAATCAGCTCATACCTCCTTTGGGAAAGCGACAGAAAGGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115390.5 ENSMUST00000234541.2 |
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