Pregenerated sensors for CCNDBP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023572Ensembl transcript IDs: ENSMUST00000060455.15, ENSMUST00000099488.11, ENSMUST00000099489.9, ENSMUST00000171260.3
Found 153 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTTGGCAGGATCACCTCCCTGCCAGTTACATCAGTGAGATGAACTaGAGGTCATTAAAAACAAACAGAACTATAAAGTTACAGCATTTC | + |
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Preference number: 1 (lower is better) Translates to: AWQDHLPASYISEMN*RSLKTNRTIKLQHF Trigger: GAAATGCTGTAACTTTATAGTTCTGTTTGTTTTTAATGACCTCCAGTTCATCTCACTGATGTAACTGGCAGGGAGGTGATCCTGCCAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099488.11 |
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| 3UTR TCA 90 bp | AATGTAAGTTGCTTGGCAGGATCACCTCCCTGCCAGTTACATCAGTaGGATGAACTGGAGGTCATTAAAAACAAACAGAACTATAAAGTT | + |
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Preference number: 1 (lower is better) Translates to: NVSCLAGSPPCQLHQ*DELEVIKNKQNYKV Trigger: AACTTTATAGTTCTGTTTGTTTTTAATGACCTCCAGTTCATCTCACTGATGTAACTGGCAGGGAGGTGATCCTGCCAAGCAACTTACATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099488.11 |
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| 3UTR-3UTR TCA 90 bp | AGCTCAGAGCACAAGTTTATAGAAATTTGTGTCCAGCACAGAAGCATAGCACACACTGGATCGTGGGTGTaGGAGAGAGGGGAGAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: SSEHKFIEICVQHRSIAHTGSWV*ERGEKE Trigger: TTCTTTCTCCCCTCTCTCTCACACCCACGATCCAGT...GTGTGCTATGCTTCTGTGCTGGACACAAATTTCTATAAACTTGTGCTCTGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
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| 3UTR-3UTR TCA 90 bp | CACAAGTTTATAGAAATTTGTGTCCAGCACAGAAGCATAGCACACTGTATGATTACTGGATCGTGGGTGTaGGAGAGAGGGGAGAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: HKFIEICVQHRSIAHCMITGSWV*ERGEKE Trigger: TTCTTTCTCCCCTCTCTCTCACACCCACGATCCAGT...AATCATACAGTGTGCTATGCTTCTGTGCTGGACACAAATTTCTATAAACTTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
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| 3UTR-3UTR GCA 90 bp | CAGCTCAGAGCACAAGTTTATAGAAATTTGTGTCCAGCACAGAAGCATAGCACACTTAAGGACAGAGGCTaGCTTTCTATCGAGCAAACA | + |
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Preference number: 2 (lower is better) Translates to: QLRAQVYRNLCPAQKHSTLKDRG*LSIEQT Trigger: TGTTTGCTCGATAGAAAGGCAGCCTCTGTCCTTAAG...TGTGCTATGCTTCTGTGCTGGACACAAATTTCTATAAACTTGTGCTCTGAGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
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| 3UTR-3UTR CCA 90 bp | TTTATAGAAATTTGTGTCCAGCACAGAAGCATAGCACACTGTATGATTGGTGGACAATCTCTCCTAGCCTaGAGTCTTGGTAACAATCTC | + |
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Preference number: 2 (lower is better) Translates to: FIEICVQHRSIAHCMIGGQSLLA*SLGNNL Trigger: GAGATTGTTACCAAGACTCCAGGCTAGGAGAGATTG...TCCACCAATCATACAGTGTGCTATGCTTCTGTGCTGGACACAAATTTCTATAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
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| 3UTR-3UTR CCA 90 bp | ATATTGAAACCAATACATCTTGTAAAATGTAAGTTGCTTGGCAGGATCACCTCCATCAGTGAGATGAACTaGAGGTCATTAAAAACAAAC | + |
|
Preference number: 2 (lower is better) Translates to: ILKPIHLVKCKLLGRITSISEMN*RSLKTN Trigger: GTTTGTTTTTAATGACCTCCAGTTCATCTCACTGAT...GGAGGTGATCCTGCCAAGCAACTTACATTTTACAAGATGTATTGGTTTCAATAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099488.11 |
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| 3UTR CCA 72 bp | TTGTGTCCAGCACAGAAGCATAGCACACTGTATGATTaGTGGATAACTGCAATCTCTCCTAGCCTGGAGTCT | + |
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Preference number: 3 (lower is better) Translates to: LCPAQKHSTLYD*WITAISPSLES Trigger: AGACTCCAGGCTAGGAGAGATTGCAGTTATCCACCAATCATACAGTGTGCTATGCTTCTGTGCTGGACACAA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
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| 3UTR TCA 72 bp | TGCTTGGCAGGATCACCTCCCTGCCAGTTACATCAGTaGGATGAACTGGAGGTCATTAAAAACAAACAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: CLAGSPPCQLHQ*DELEVIKNKQN Trigger: GTTCTGTTTGTTTTTAATGACCTCCAGTTCATCTCACTGATGTAACTGGCAGGGAGGTGATCCTGCCAAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099488.11 |
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| 3UTR GCA 72 bp | TTAATGTTCCAAAGAACCTGCCATCCTGAAGAGTTCTaGACATTAATCAATCTTCCACCATCTATTTTATCA | + |
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Preference number: 3 (lower is better) Translates to: LMFQRTCHPEEF*TLINLPPSILS Trigger: TGATAAAATAGATGGTGGAAGATTGATTAATGTGCAGAACTCTTCAGGATGGCAGGTTCTTTGGAACATTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099488.11 |
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| CDS-3UTR GCA 90 bp | CTTCTTAAGGACAGAGGCTGCCTTTCTATCGAGCAAACACCCTGTCAAAGCTCCAGCTCCTCTGCTAAGTaGCGGAGCTGCTCCAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LLKDRGCLSIEQTPCQSSSSSAK*RSCSRG Trigger: GCCTCTGGAGCAGCTCCGGCACTTAGCAGAGGAGCT...GGAGCTTTGACAGGGTGTTTGCTCGATAGAAAGGCAGCCTCTGTCCTTAAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060455.15 |
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| CDS-3UTR GCA 90 bp | TTAAGGACAGAGGCTGCCTTTCTATCGAGCAAACACCCTGTCAAAGCTCCACTTCCAGGAGCTGAGCCATaGCGTCCACGATGTCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LRTEAAFLSSKHPVKAPLPGAEP*RPRCPG Trigger: CCCTGGACATCGTGGACGGCATGGCTCAGCTCCTGG...AAGTGGAGCTTTGACAGGGTGTTTGCTCGATAGAAAGGCAGCCTCTGTCCTTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
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| CDS-3UTR CCA 90 bp | CCAATACATCTTGTAAAATGTAAGTTGCTTGGCAGGATCACCTCCCTGCCAGTTTCCTCCGCTGTCTCCTaGGCTTCGCCGACCCGTACT | + |
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Preference number: 4 (lower is better) Translates to: PIHLVKCKLLGRITSLPVSSAVS*ASPTRT Trigger: AGTACGGGTCGGCGAAGCCCAGGAGACAGCGGAGGA...AACTGGCAGGGAGGTGATCCTGCCAAGCAACTTACATTTTACAAGATGTATTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099488.11 |
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| CDS-3UTR GCA 90 bp | CCAATACATCTTGTAAAATGTAAGTTGCTTGGCAGGATCACCTCCCTGCCAGTTGCTGGGCTTGCTTGCTaGCAGACCAGCTCCAGGTTC | + |
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Preference number: 4 (lower is better) Translates to: PIHLVKCKLLGRITSLPVAGLAC*QTSSRF Trigger: GAACCTGGAGCTGGTCTGGCAGCAAGCAAGCCCAGC...AACTGGCAGGGAGGTGATCCTGCCAAGCAACTTACATTTTACAAGATGTATTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099488.11 |
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| CDS-3UTR CCA 90 bp | AGCTCAGAGCACAAGTTTATAGAAATTTGTGTCCAGCACAGAAGCATAGCACACTCCTCCGCTGTCTCCTaGGCTTCGCCGACCCGTACT | + |
|
Preference number: 4 (lower is better) Translates to: SSEHKFIEICVQHRSIAHSSAVS*ASPTRT Trigger: AGTACGGGTCGGCGAAGCCCAGGAGACAGCGGAGGA...GTGTGCTATGCTTCTGTGCTGGACACAAATTTCTATAAACTTGTGCTCTGAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060455.15 |
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| CDS-3UTR TCA 90 bp | AGGACAGAGGCTGCCTTTCTATCGAGCAAACACCCTGTCAAAGCTCCACTTCTAAGATCCGGATTTTCTTaGGTGAAGCTCGGGATGCTC | + |
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Preference number: 4 (lower is better) Translates to: RTEAAFLSSKHPVKAPLLRSGFS*VKLGML Trigger: GAGCATCCCGAGCTTCACTCAAGAAAATCCGGATCT...TAGAAGTGGAGCTTTGACAGGGTGTTTGCTCGATAGAAAGGCAGCCTCTGTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
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| CDS-3UTR CCA 90 bp | CTTCTTAAGGACAGAGGCTGCCTTTCTATCGAGCAAACACCCTGTCAAAGCTCCCCTCTGGGTTTCCTGTaGAGATGGCCATGGAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLKDRGCLSIEQTPCQSSPLGFL*RWPWKF Trigger: AAACTTCCATGGCCATCTCCACAGGAAACCCAGAGG...GGAGCTTTGACAGGGTGTTTGCTCGATAGAAAGGCAGCCTCTGTCCTTAAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
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| CDS-3UTR CCA 90 bp | TTAAGGACAGAGGCTGCCTTTCTATCGAGCAAACACCCTGTCAAAGCTCCACTTATCCGCACAGTGAGGTaGCACACAGGTGGGTATATG | + |
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Preference number: 4 (lower is better) Translates to: LRTEAAFLSSKHPVKAPLIRTVR*HTGGYM Trigger: CATATACCCACCTGTGTGCCACCTCACTGTGCGGAT...AAGTGGAGCTTTGACAGGGTGTTTGCTCGATAGAAAGGCAGCCTCTGTCCTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
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| CDS-3UTR CCA 90 bp | AGCACACTGTATGATTGGTGGATAACTGCAATCTCTCCTAGCCTGGAGTCTTGGATCCGCACAGTGAGGTaGCACACAGGTGGGTATATG | + |
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Preference number: 4 (lower is better) Translates to: STLYDWWITAISPSLESWIRTVR*HTGGYM Trigger: CATATACCCACCTGTGTGCCACCTCACTGTGCGGAT...CCAAGACTCCAGGCTAGGAGAGATTGCAGTTATCCACCAATCATACAGTGTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
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| CDS-3UTR TCA 90 bp | TTCTTAAGGACAGAGGCTGCCTTTCTATCGAGCAAACACCCTGTCAAAGCTCCACCATTCTCAGTGCTCTaGGATGGAGCAGTAAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: FLRTEAAFLSSKHPVKAPPFSVL*DGAVRS Trigger: GCTTCTTACTGCTCCATCTCAGAGCACTGAGAATGG...TGGAGCTTTGACAGGGTGTTTGCTCGATAGAAAGGCAGCCTCTGTCCTTAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
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| CDS-3UTR TCA 90 bp | TTAAGGACAGAGGCTGCCTTTCTATCGAGCAAACACCCTGTCAAAGCTCCACTTCCATTCTCAGTGCTCTaGGATGGAGCAGTAAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LRTEAAFLSSKHPVKAPLPFSVL*DGAVRS Trigger: GCTTCTTACTGCTCCATCTCAGAGCACTGAGAATGG...AAGTGGAGCTTTGACAGGGTGTTTGCTCGATAGAAAGGCAGCCTCTGTCCTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
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| CDS-3UTR TCA 90 bp | AGCACACTGTATGATTGGTGGATAACTGCAATCTCTCCTAGCCTGGAGTCTTGGAGATCCGGATTTTCTTaGGTGAAGCTCGGGATGCTC | + |
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Preference number: 4 (lower is better) Translates to: STLYDWWITAISPSLESWRSGFS*VKLGML Trigger: GAGCATCCCGAGCTTCACTCAAGAAAATCCGGATCT...CCAAGACTCCAGGCTAGGAGAGATTGCAGTTATCCACCAATCATACAGTGTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
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| CDS-3UTR TCA 90 bp | TTAAGGACAGAGGCTGCCTTTCTATCGAGCAAACACCCTGTCAAAGCTCCACTTCATCCACACTGGGGCTaGTCTCATCAGAAATGTCCA | + |
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Preference number: 4 (lower is better) Translates to: LRTEAAFLSSKHPVKAPLHPHWG*SHQKCP Trigger: TGGACATTTCTGATGAGATCAGCCCCAGTGTGGATG...AAGTGGAGCTTTGACAGGGTGTTTGCTCGATAGAAAGGCAGCCTCTGTCCTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
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| CDS-3UTR GCA 90 bp | TTTATAGAAATTTGTGTCCAGCACAGAAGCATAGCACACTGTATGATTGGTGGAGCTAAGTGCCGGAGCTaGTCCAGAGGCGGAGCAAGG | + |
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Preference number: 4 (lower is better) Translates to: FIEICVQHRSIAHCMIGGAKCRS*SRGGAR Trigger: CCTTGCTCCGCCTCTGGAGCAGCTCCGGCACTTAGC...TCCACCAATCATACAGTGTGCTATGCTTCTGTGCTGGACACAAATTTCTATAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060455.15 |
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| CDS-3UTR CCA 90 bp | AGGACAGAGGCTGCCTTTCTATCGAGCAAACACCCTGTCAAAGCTCCACTTCTACTGTGGAGATGGCCATaGAAGTTTAGAGAAGTGCGT | + |
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Preference number: 4 (lower is better) Translates to: RTEAAFLSSKHPVKAPLLLWRWP*KFREVR Trigger: ACGCACTTCTCTAAACTTCCATGGCCATCTCCACAG...TAGAAGTGGAGCTTTGACAGGGTGTTTGCTCGATAGAAAGGCAGCCTCTGTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
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| CDS-3UTR CCA 90 bp | CTTCTTAAGGACAGAGGCTGCCTTTCTATCGAGCAAACACCCTGTCAAAGCTCCCTGTGGAGATGGCCATaGAAGTTTAGAGAAGTGCGT | + |
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Preference number: 4 (lower is better) Translates to: LLKDRGCLSIEQTPCQSSLWRWP*KFREVR Trigger: ACGCACTTCTCTAAACTTCCATGGCCATCTCCACAG...GGAGCTTTGACAGGGTGTTTGCTCGATAGAAAGGCAGCCTCTGTCCTTAAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
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| CDS-3UTR CCA 90 bp | TTCTTAAGGACAGAGGCTGCCTTTCTATCGAGCAAACACCCTGTCAAAGCTCCACCTCTGGGTTTCCTGTaGAGATGGCCATGGAAGTTT | + |
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Preference number: 4 (lower is better) Translates to: FLRTEAAFLSSKHPVKAPPLGFL*RWPWKF Trigger: AAACTTCCATGGCCATCTCCACAGGAAACCCAGAGG...TGGAGCTTTGACAGGGTGTTTGCTCGATAGAAAGGCAGCCTCTGTCCTTAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
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| CDS-3UTR CCA 90 bp | CTTCTTAAGGACAGAGGCTGCCTTTCTATCGAGCAAACACCCTGTCAAAGCTCCCTCAGTGCTCTGAGATaGAGCAGTAAGAAGCACTTC | + |
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Preference number: 4 (lower is better) Translates to: LLKDRGCLSIEQTPCQSSLSALR*SSKKHF Trigger: GAAGTGCTTCTTACTGCTCCATCTCAGAGCACTGAG...GGAGCTTTGACAGGGTGTTTGCTCGATAGAAAGGCAGCCTCTGTCCTTAAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
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| CDS-3UTR TCA 90 bp | AGGACAGAGGCTGCCTTTCTATCGAGCAAACACCCTGTCAAAGCTCCACTTCTACTGTTGACATGCGACTaGGACACTATTGCAGGAAAT | + |
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Preference number: 4 (lower is better) Translates to: RTEAAFLSSKHPVKAPLLLLTCD*DTIAGN Trigger: ATTTCCTGCAATAGTGTCTCAGTCGCATGTCAACAG...TAGAAGTGGAGCTTTGACAGGGTGTTTGCTCGATAGAAAGGCAGCCTCTGTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
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| CDS-3UTR GCA 90 bp | AAGTTAATGTTCCAAAGAACCTGCCATCCTGAAGAGTTCTGCACATTAATCAATGCTAAGTGCCGGAGCTaGTCCAGAGGCGGAGCAAGG | + |
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Preference number: 4 (lower is better) Translates to: KLMFQRTCHPEEFCTLINAKCRS*SRGGAR Trigger: CCTTGCTCCGCCTCTGGAGCAGCTCCGGCACTTAGC...ATTGATTAATGTGCAGAACTCTTCAGGATGGCAGGTTCTTTGGAACATTAACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099488.11 |
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| CDS-3UTR GCA 90 bp | CTTCTTAAGGACAGAGGCTGCCTTTCTATCGAGCAAACACCCTGTCAAAGCTCCGGAAGTTTAGAGAAGTaGGTTGTCAGAACAGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: LLKDRGCLSIEQTPCQSSGSLEK*VVRTVA Trigger: AGCCACTGTTCTGACAACGCACTTCTCTAAACTTCC...GGAGCTTTGACAGGGTGTTTGCTCGATAGAAAGGCAGCCTCTGTCCTTAAGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
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| CDS-3UTR GCA 90 bp | CACAAGTTTATAGAAATTTGTGTCCAGCACAGAAGCATAGCACACTGTATGATTCCAGGAGCTGAGCCATaGCGTCCACGATGTCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: HKFIEICVQHRSIAHCMIPGAEP*RPRCPG Trigger: CCCTGGACATCGTGGACGGCATGGCTCAGCTCCTGG...AATCATACAGTGTGCTATGCTTCTGTGCTGGACACAAATTTCTATAAACTTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
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| CDS-3UTR GCA 90 bp | AAGTTAATGTTCCAAAGAACCTGCCATCCTGAAGAGTTCTGCACATTAATCAATCCAGGAGCTGAGCCATaGCGTCCACGATGTCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: KLMFQRTCHPEEFCTLINPGAEP*RPRCPG Trigger: CCCTGGACATCGTGGACGGCATGGCTCAGCTCCTGG...ATTGATTAATGTGCAGAACTCTTCAGGATGGCAGGTTCTTTGGAACATTAACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099488.11 |
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| CDS-3UTR GCA 90 bp | CTTCTTAAGGACAGAGGCTGCCTTTCTATCGAGCAAACACCCTGTCAAAGCTCCCGACTGAGACACTATTaGAGGAAATCAGGTCACCAT | + |
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Preference number: 4 (lower is better) Translates to: LLKDRGCLSIEQTPCQSSRLRHY*RKSGHH Trigger: ATGGTGACCTGATTTCCTGCAATAGTGTCTCAGTCG...GGAGCTTTGACAGGGTGTTTGCTCGATAGAAAGGCAGCCTCTGTCCTTAAGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
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| CDS-3UTR GCA 90 bp | CTTCTTAAGGACAGAGGCTGCCTTTCTATCGAGCAAACACCCTGTCAAAGCTCCCAGCATCAAAAGGGCTaGGGCTTTGTTATCTTTTGG | + |
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Preference number: 4 (lower is better) Translates to: LLKDRGCLSIEQTPCQSSQHQKG*GFVIFW Trigger: CCAAAAGATAACAAAGCCGCAGCCCTTTTGATGCTG...GGAGCTTTGACAGGGTGTTTGCTCGATAGAAAGGCAGCCTCTGTCCTTAAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
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| CDS-3UTR GCA 90 bp | AGGACAGAGGCTGCCTTTCTATCGAGCAAACACCCTGTCAAAGCTCCACTTCTACAGCATCAAAAGGGCTaGGGCTTTGTTATCTTTTGG | + |
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Preference number: 4 (lower is better) Translates to: RTEAAFLSSKHPVKAPLLQHQKG*GFVIFW Trigger: CCAAAAGATAACAAAGCCGCAGCCCTTTTGATGCTG...TAGAAGTGGAGCTTTGACAGGGTGTTTGCTCGATAGAAAGGCAGCCTCTGTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
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| CDS-3UTR GCA 90 bp | CTTCTTAAGGACAGAGGCTGCCTTTCTATCGAGCAAACACCCTGTCAAAGCTCCGGGGCTCACGTGACTTaGTTTTGTAATTTCAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: LLKDRGCLSIEQTPCQSSGAHVT*FCNFKS Trigger: GCTCTTGAAATTACAAAAGCAAGTCACGTGAGCCCC...GGAGCTTTGACAGGGTGTTTGCTCGATAGAAAGGCAGCCTCTGTCCTTAAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
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| CDS-3UTR CCA 90 bp | AGGACAGAGGCTGCCTTTCTATCGAGCAAACACCCTGTCAAAGCTCCACTTCTAGGTTTCCTGTGGAGATaGCCATGGAAGTTTAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: RTEAAFLSSKHPVKAPLLGFLWR*PWKFRE Trigger: TTCTCTAAACTTCCATGGCCATCTCCACAGGAAACC...TAGAAGTGGAGCTTTGACAGGGTGTTTGCTCGATAGAAAGGCAGCCTCTGTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
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| CDS-3UTR CCA 90 bp | TTCTTAAGGACAGAGGCTGCCTTTCTATCGAGCAAACACCCTGTCAAAGCTCCACTCAGTGCTCTGAGATaGAGCAGTAAGAAGCACTTC | + |
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Preference number: 4 (lower is better) Translates to: FLRTEAAFLSSKHPVKAPLSALR*SSKKHF Trigger: GAAGTGCTTCTTACTGCTCCATCTCAGAGCACTGAG...TGGAGCTTTGACAGGGTGTTTGCTCGATAGAAAGGCAGCCTCTGTCCTTAAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
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| CDS-3UTR CCA 90 bp | TTCTTAAGGACAGAGGCTGCCTTTCTATCGAGCAAACACCCTGTCAAAGCTCCAACAATGTCATCCAGCTaGGCCACCTCATCCTTCTTT | + |
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Preference number: 4 (lower is better) Translates to: FLRTEAAFLSSKHPVKAPTMSSS*ATSSFF Trigger: AAAGAAGGATGAGGTGGCCCAGCTGGATGACATTGT...TGGAGCTTTGACAGGGTGTTTGCTCGATAGAAAGGCAGCCTCTGTCCTTAAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
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| CDS-3UTR CCA 90 bp | CCAATACATCTTGTAAAATGTAAGTTGCTTGGCAGGATCACCTCCCTGCCAGTTATCCGCACAGTGAGGTaGCACACAGGTGGGTATATG | + |
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Preference number: 4 (lower is better) Translates to: PIHLVKCKLLGRITSLPVIRTVR*HTGGYM Trigger: CATATACCCACCTGTGTGCCACCTCACTGTGCGGAT...AACTGGCAGGGAGGTGATCCTGCCAAGCAACTTACATTTTACAAGATGTATTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099488.11 |
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| CDS-3UTR TCA 90 bp | CCAATACATCTTGTAAAATGTAAGTTGCTTGGCAGGATCACCTCCCTGCCAGTTCCATTCTCAGTGCTCTaGGATGGAGCAGTAAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: PIHLVKCKLLGRITSLPVPFSVL*DGAVRS Trigger: GCTTCTTACTGCTCCATCTCAGAGCACTGAGAATGG...AACTGGCAGGGAGGTGATCCTGCCAAGCAACTTACATTTTACAAGATGTATTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099488.11 |
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| CDS-3UTR GCA 90 bp | ATATTGAAACCAATACATCTTGTAAAATGTAAGTTGCTTGGCAGGATCACCTCCAGCTCCTCTGCTAAGTaGCGGAGCTGCTCCAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: ILKPIHLVKCKLLGRITSSSSAK*RSCSRG Trigger: GCCTCTGGAGCAGCTCCGGCACTTAGCAGAGGAGCT...GGAGGTGATCCTGCCAAGCAACTTACATTTTACAAGATGTATTGGTTTCAATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099488.11 |
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| CDS-3UTR GCA 90 bp | AGGACAGAGGCTGCCTTTCTATCGAGCAAACACCCTGTCAAAGCTCCACTTCTACATTCTTCTACAGCCTaGTCCATTTCTTCATGTGCA | + |
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Preference number: 4 (lower is better) Translates to: RTEAAFLSSKHPVKAPLLHSSTA*SISSCA Trigger: TGCACATGAAGAAATGGAGCAGGCTGTAGAAGAATG...TAGAAGTGGAGCTTTGACAGGGTGTTTGCTCGATAGAAAGGCAGCCTCTGTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
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| CDS-3UTR GCA 90 bp | TTAAGGACAGAGGCTGCCTTTCTATCGAGCAAACACCCTGTCAAAGCTCCACTTGGGGCTCACGTGACTTaGTTTTGTAATTTCAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LRTEAAFLSSKHPVKAPLGAHVT*FCNFKS Trigger: GCTCTTGAAATTACAAAAGCAAGTCACGTGAGCCCC...AAGTGGAGCTTTGACAGGGTGTTTGCTCGATAGAAAGGCAGCCTCTGTCCTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
||
| CDS-3UTR GCA 90 bp | ATATTGAAACCAATACATCTTGTAAAATGTAAGTTGCTTGGCAGGATCACCTCCATCGCTGGGCTTGCTTaGTGCCAGACCAGCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ILKPIHLVKCKLLGRITSIAGLA*CQTSSR Trigger: CCTGGAGCTGGTCTGGCAGCAAGCAAGCCCAGCGAT...GGAGGTGATCCTGCCAAGCAACTTACATTTTACAAGATGTATTGGTTTCAATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099488.11 |
||
| CDS-3UTR CCA 90 bp | CTCAGAGCACAAGTTTATAGAAATTTGTGTCCAGCACAGAAGCATAGCACACTGTGCTCACAGATCCTCTaGGTTTCCTGTGGAGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: LRAQVYRNLCPAQKHSTLCSQIL*VSCGDG Trigger: GCCATCTCCACAGGAAACCCAGAGGATCTGTGAGCA...CAGTGTGCTATGCTTCTGTGCTGGACACAAATTTCTATAAACTTGTGCTCTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
||
| CDS-3UTR CCA 90 bp | TTCTTAAGGACAGAGGCTGCCTTTCTATCGAGCAAACACCCTGTCAAAGCTCCACAAAATCCACACTCTTaGTCAGCATCAAAAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FLRTEAAFLSSKHPVKAPQNPHS*SASKGL Trigger: CAGCCCTTTTGATGCTGACCAAGAGTGTGGATTTTG...TGGAGCTTTGACAGGGTGTTTGCTCGATAGAAAGGCAGCCTCTGTCCTTAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
||
| CDS-3UTR CCA 90 bp | CCAATACATCTTGTAAAATGTAAGTTGCTTGGCAGGATCACCTCCCTGCCAGTTATGAGTCCCGATTGCTaGGAAGCCCTAACACACCAT | + |
|
Preference number: 4 (lower is better) Translates to: PIHLVKCKLLGRITSLPVMSPDC*EALTHH Trigger: ATGGTGTGTTAGGGCTTCCCAGCAATCGGGACTCAT...AACTGGCAGGGAGGTGATCCTGCCAAGCAACTTACATTTTACAAGATGTATTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099488.11 |
||
| CDS-3UTR CCA 90 bp | CCAATACATCTTGTAAAATGTAAGTTGCTTGGCAGGATCACCTCCCTGCCAGTTGAGGTGGCACACAGGTaGGTATATGCTCAGAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: PIHLVKCKLLGRITSLPVEVAHR*VYAQNQ Trigger: TTGGTTCTGAGCATATACCCACCTGTGTGCCACCTC...AACTGGCAGGGAGGTGATCCTGCCAAGCAACTTACATTTTACAAGATGTATTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099488.11 |
||
| CDS-3UTR TCA 90 bp | AGCTCAGAGCACAAGTTTATAGAAATTTGTGTCCAGCACAGAAGCATAGCACACCCAGGCACGGGATTATaGGTTCTTGATCTTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSEHKFIEICVQHRSIAHPGTGL*VLDLPL Trigger: CAGAGGAAGATCAAGAACTCATAATCCCGTGCCTGG...GTGTGCTATGCTTCTGTGCTGGACACAAATTTCTATAAACTTGTGCTCTGAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
||
| CDS-3UTR CCA 90 bp | CAGCTCAGAGCACAAGTTTATAGAAATTTGTGTCCAGCACAGAAGCATAGCACAATGAGTCCCGATTGCTaGGAAGCCCTAACACACCAT | + |
|
Preference number: 4 (lower is better) Translates to: QLRAQVYRNLCPAQKHSTMSPDC*EALTHH Trigger: ATGGTGTGTTAGGGCTTCCCAGCAATCGGGACTCAT...TGTGCTATGCTTCTGTGCTGGACACAAATTTCTATAAACTTGTGCTCTGAGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
||
| CDS-3UTR CCA 90 bp | CCAATACATCTTGTAAAATGTAAGTTGCTTGGCAGGATCACCTCCCTGCCAGTTACAATGTCATCCAGCTaGGCCACCTCATCCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PIHLVKCKLLGRITSLPVTMSSS*ATSSFF Trigger: AAAGAAGGATGAGGTGGCCCAGCTGGATGACATTGT...AACTGGCAGGGAGGTGATCCTGCCAAGCAACTTACATTTTACAAGATGTATTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099488.11 |
||
| CDS-3UTR CCA 90 bp | AAGTTAATGTTCCAAAGAACCTGCCATCCTGAAGAGTTCTGCACATTAATCAATGTTACTCCAGCGCTGTaGGCACAGAGGCAAGGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: KLMFQRTCHPEEFCTLINVTPAL*AQRQGD Trigger: ATCGCCTTGCCTCTGTGCCCACAGCGCTGGAGTAAC...ATTGATTAATGTGCAGAACTCTTCAGGATGGCAGGTTCTTTGGAACATTAACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099488.11 |
||
| CDS-3UTR GCA 90 bp | CCAATACATCTTGTAAAATGTAAGTTGCTTGGCAGGATCACCTCCCTGCCAGTTCAGCATCAAAAGGGCTaGGGCTTTGTTATCTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PIHLVKCKLLGRITSLPVQHQKG*GFVIFW Trigger: CCAAAAGATAACAAAGCCGCAGCCCTTTTGATGCTG...AACTGGCAGGGAGGTGATCCTGCCAAGCAACTTACATTTTACAAGATGTATTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099488.11 |
||
| CDS-3UTR CCA 90 bp | CCAATACATCTTGTAAAATGTAAGTTGCTTGGCAGGATCACCTCCCTGCCAGTTGGTTTCCTGTGGAGATaGCCATGGAAGTTTAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PIHLVKCKLLGRITSLPVGFLWR*PWKFRE Trigger: TTCTCTAAACTTCCATGGCCATCTCCACAGGAAACC...AACTGGCAGGGAGGTGATCCTGCCAAGCAACTTACATTTTACAAGATGTATTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099488.11 |
||
| CDS-3UTR CCA 90 bp | CCAATACATCTTGTAAAATGTAAGTTGCTTGGCAGGATCACCTCCCTGCCAGTTGGCTTTGTTATCTTTTaGGATCTCAGGCACCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PIHLVKCKLLGRITSLPVGFVIF*DLRHLL Trigger: CAACAGGTGCCTGAGATCCCAAAAGATAACAAAGCC...AACTGGCAGGGAGGTGATCCTGCCAAGCAACTTACATTTTACAAGATGTATTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099488.11 |
||
| CDS-3UTR CCA 90 bp | AGCTCAGAGCACAAGTTTATAGAAATTTGTGTCCAGCACAGAAGCATAGCACACACAATGTCATCCAGCTaGGCCACCTCATCCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSEHKFIEICVQHRSIAHTMSSS*ATSSFF Trigger: AAAGAAGGATGAGGTGGCCCAGCTGGATGACATTGT...GTGTGCTATGCTTCTGTGCTGGACACAAATTTCTATAAACTTGTGCTCTGAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
||
| CDS-3UTR TCA 90 bp | CCAATACATCTTGTAAAATGTAAGTTGCTTGGCAGGATCACCTCCCTGCCAGTTGGGATTATGAGTTCTTaGTCTTCCTCTGACCAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: PIHLVKCKLLGRITSLPVGIMSS*SSSDQY Trigger: ATACTGGTCAGAGGAAGATCAAGAACTCATAATCCC...AACTGGCAGGGAGGTGATCCTGCCAAGCAACTTACATTTTACAAGATGTATTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099488.11 |
||
| CDS-3UTR TCA 90 bp | TTTATAGAAATTTGTGTCCAGCACAGAAGCATAGCACACTGTATGATTGGTGGACCAGGCACGGGATTATaGGTTCTTGATCTTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FIEICVQHRSIAHCMIGGPGTGL*VLDLPL Trigger: CAGAGGAAGATCAAGAACTCATAATCCCGTGCCTGG...TCCACCAATCATACAGTGTGCTATGCTTCTGTGCTGGACACAAATTTCTATAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
||
| CDS-3UTR TCA 90 bp | CAAGTTTATAGAAATTTGTGTCCAGCACAGAAGCATAGCACACTGTATGATTGGCATCCACACTGGGGCTaGTCTCATCAGAAATGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QVYRNLCPAQKHSTLYDWHPHWG*SHQKCP Trigger: TGGACATTTCTGATGAGATCAGCCCCAGTGTGGATG...CCAATCATACAGTGTGCTATGCTTCTGTGCTGGACACAAATTTCTATAAACTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
||
| CDS-3UTR TCA 90 bp | ATATTGAAACCAATACATCTTGTAAAATGTAAGTTGCTTGGCAGGATCACCTCCCAGCTCCAGGTTCAGTaGGTGAACTGTCTCAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: ILKPIHLVKCKLLGRITSQLQVQ*VNCLRV Trigger: TACCCTGAGACAGTTCACTCACTGAACCTGGAGCTG...GGAGGTGATCCTGCCAAGCAACTTACATTTTACAAGATGTATTGGTTTCAATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099488.11 |
||
| CDS-3UTR CCA 90 bp | CAGCTCAGAGCACAAGTTTATAGAAATTTGTGTCCAGCACAGAAGCATAGCACAGGTTTCCTGTGGAGATaGCCATGGAAGTTTAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QLRAQVYRNLCPAQKHSTGFLWR*PWKFRE Trigger: TTCTCTAAACTTCCATGGCCATCTCCACAGGAAACC...TGTGCTATGCTTCTGTGCTGGACACAAATTTCTATAAACTTGTGCTCTGAGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
||
| CDS-3UTR CCA 90 bp | CACAAGTTTATAGAAATTTGTGTCCAGCACAGAAGCATAGCACACTGTATGATTTGCTCACAGATCCTCTaGGTTTCCTGTGGAGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: HKFIEICVQHRSIAHCMICSQIL*VSCGDG Trigger: GCCATCTCCACAGGAAACCCAGAGGATCTGTGAGCA...AATCATACAGTGTGCTATGCTTCTGTGCTGGACACAAATTTCTATAAACTTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
||
| CDS-3UTR CCA 90 bp | ATATTGAAACCAATACATCTTGTAAAATGTAAGTTGCTTGGCAGGATCACCTCCTGCTCACAGATCCTCTaGGTTTCCTGTGGAGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: ILKPIHLVKCKLLGRITSCSQIL*VSCGDG Trigger: GCCATCTCCACAGGAAACCCAGAGGATCTGTGAGCA...GGAGGTGATCCTGCCAAGCAACTTACATTTTACAAGATGTATTGGTTTCAATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099488.11 |
||
| CDS-3UTR CCA 90 bp | AGCTCAGAGCACAAGTTTATAGAAATTTGTGTCCAGCACAGAAGCATAGCACACGGCTTTGTTATCTTTTaGGATCTCAGGCACCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSEHKFIEICVQHRSIAHGFVIF*DLRHLL Trigger: CAACAGGTGCCTGAGATCCCAAAAGATAACAAAGCC...GTGTGCTATGCTTCTGTGCTGGACACAAATTTCTATAAACTTGTGCTCTGAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
||
| CDS-3UTR CCA 90 bp | CAAGTTTATAGAAATTTGTGTCCAGCACAGAAGCATAGCACACTGTATGATTGGATGAGTCCCGATTGCTaGGAAGCCCTAACACACCAT | + |
|
Preference number: 4 (lower is better) Translates to: QVYRNLCPAQKHSTLYDWMSPDC*EALTHH Trigger: ATGGTGTGTTAGGGCTTCCCAGCAATCGGGACTCAT...CCAATCATACAGTGTGCTATGCTTCTGTGCTGGACACAAATTTCTATAAACTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
||
| CDS-3UTR TCA 90 bp | AGCTCAGAGCACAAGTTTATAGAAATTTGTGTCCAGCACAGAAGCATAGCACACTCACTGCTGCCTCATTaGGTCTTCTCCAAAACATTT | + |
|
Preference number: 4 (lower is better) Translates to: SSEHKFIEICVQHRSIAHSLLPH*VFSKTF Trigger: AAATGTTTTGGAGAAGACTCAATGAGGCAGCAGTGA...GTGTGCTATGCTTCTGTGCTGGACACAAATTTCTATAAACTTGTGCTCTGAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060455.15 |
||
| CDS-3UTR TCA 90 bp | CTCAGAGCACAAGTTTATAGAAATTTGTGTCCAGCACAGAAGCATAGCACACTGGGGATTATGAGTTCTTaGTCTTCCTCTGACCAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: LRAQVYRNLCPAQKHSTLGIMSS*SSSDQY Trigger: ATACTGGTCAGAGGAAGATCAAGAACTCATAATCCC...CAGTGTGCTATGCTTCTGTGCTGGACACAAATTTCTATAAACTTGTGCTCTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
||
| CDS-3UTR TCA 90 bp | AAGTTAATGTTCCAAAGAACCTGCCATCCTGAAGAGTTCTGCACATTAATCAATCCAGGCACGGGATTATaGGTTCTTGATCTTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KLMFQRTCHPEEFCTLINPGTGL*VLDLPL Trigger: CAGAGGAAGATCAAGAACTCATAATCCCGTGCCTGG...ATTGATTAATGTGCAGAACTCTTCAGGATGGCAGGTTCTTTGGAACATTAACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099488.11 |
||
| CDS-3UTR TCA 90 bp | ATATTGAAACCAATACATCTTGTAAAATGTAAGTTGCTTGGCAGGATCACCTCCAGATCCGGATTTTCTTaGGTGAAGCTCGGGATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ILKPIHLVKCKLLGRITSRSGFS*VKLGML Trigger: GAGCATCCCGAGCTTCACTCAAGAAAATCCGGATCT...GGAGGTGATCCTGCCAAGCAACTTACATTTTACAAGATGTATTGGTTTCAATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099488.11 |
||
| CDS-3UTR TCA 90 bp | AAGTTAATGTTCCAAAGAACCTGCCATCCTGAAGAGTTCTGCACATTAATCAATCATCCACACTGGGGCTaGTCTCATCAGAAATGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KLMFQRTCHPEEFCTLINHPHWG*SHQKCP Trigger: TGGACATTTCTGATGAGATCAGCCCCAGTGTGGATG...ATTGATTAATGTGCAGAACTCTTCAGGATGGCAGGTTCTTTGGAACATTAACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099488.11 |
||
| CDS-3UTR GCA 90 bp | CAGCTCAGAGCACAAGTTTATAGAAATTTGTGTCCAGCACAGAAGCATAGCACACATTCTTCTACAGCCTaGTCCATTTCTTCATGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QLRAQVYRNLCPAQKHSTHSSTA*SISSCA Trigger: TGCACATGAAGAAATGGAGCAGGCTGTAGAAGAATG...TGTGCTATGCTTCTGTGCTGGACACAAATTTCTATAAACTTGTGCTCTGAGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
||
| CDS-3UTR CCA 90 bp | AAGTTAATGTTCCAAAGAACCTGCCATCCTGAAGAGTTCTGCACATTAATCAATCCTCTGGGTTTCCTGTaGAGATGGCCATGGAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: KLMFQRTCHPEEFCTLINPLGFL*RWPWKF Trigger: AAACTTCCATGGCCATCTCCACAGGAAACCCAGAGG...ATTGATTAATGTGCAGAACTCTTCAGGATGGCAGGTTCTTTGGAACATTAACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099488.11 |
||
| CDS-3UTR CCA 90 bp | CACAAGTTTATAGAAATTTGTGTCCAGCACAGAAGCATAGCACACTGTATGATTGAGGTGGCACACAGGTaGGTATATGCTCAGAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: HKFIEICVQHRSIAHCMIEVAHR*VYAQNQ Trigger: TTGGTTCTGAGCATATACCCACCTGTGTGCCACCTC...AATCATACAGTGTGCTATGCTTCTGTGCTGGACACAAATTTCTATAAACTTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
||
| CDS-3UTR TCA 90 bp | TTTATAGAAATTTGTGTCCAGCACAGAAGCATAGCACACTGTATGATTGGTGGACTGTTGACATGCGACTaGGACACTATTGCAGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: FIEICVQHRSIAHCMIGGLLTCD*DTIAGN Trigger: ATTTCCTGCAATAGTGTCTCAGTCGCATGTCAACAG...TCCACCAATCATACAGTGTGCTATGCTTCTGTGCTGGACACAAATTTCTATAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
||
| CDS-3UTR GCA 90 bp | CAAGTTTATAGAAATTTGTGTCCAGCACAGAAGCATAGCACACTGTATGATTGGCGACTGAGACACTATTaGAGGAAATCAGGTCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: QVYRNLCPAQKHSTLYDWRLRHY*RKSGHH Trigger: ATGGTGACCTGATTTCCTGCAATAGTGTCTCAGTCG...CCAATCATACAGTGTGCTATGCTTCTGTGCTGGACACAAATTTCTATAAACTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
||
| CDS-3UTR CCA 90 bp | AAGTTAATGTTCCAAAGAACCTGCCATCCTGAAGAGTTCTGCACATTAATCAATCTGTGGAGATGGCCATaGAAGTTTAGAGAAGTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: KLMFQRTCHPEEFCTLINLWRWP*KFREVR Trigger: ACGCACTTCTCTAAACTTCCATGGCCATCTCCACAG...ATTGATTAATGTGCAGAACTCTTCAGGATGGCAGGTTCTTTGGAACATTAACTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099488.11 |
||
| CDS-3UTR CCA 90 bp | ATATTGAAACCAATACATCTTGTAAAATGTAAGTTGCTTGGCAGGATCACCTCCCTCAGTGCTCTGAGATaGAGCAGTAAGAAGCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: ILKPIHLVKCKLLGRITSLSALR*SSKKHF Trigger: GAAGTGCTTCTTACTGCTCCATCTCAGAGCACTGAG...GGAGGTGATCCTGCCAAGCAACTTACATTTTACAAGATGTATTGGTTTCAATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099488.11 |
||
| CDS-3UTR CCA 90 bp | CAAGTTTATAGAAATTTGTGTCCAGCACAGAAGCATAGCACACTGTATGATTGGGGCTTTGTTATCTTTTaGGATCTCAGGCACCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QVYRNLCPAQKHSTLYDWGFVIF*DLRHLL Trigger: CAACAGGTGCCTGAGATCCCAAAAGATAACAAAGCC...CCAATCATACAGTGTGCTATGCTTCTGTGCTGGACACAAATTTCTATAAACTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
||
| CDS-3UTR CCA 90 bp | TTTATAGAAATTTGTGTCCAGCACAGAAGCATAGCACACTGTATGATTGGTGGACAAAATCCACACTCTTaGTCAGCATCAAAAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FIEICVQHRSIAHCMIGGQNPHS*SASKGL Trigger: CAGCCCTTTTGATGCTGACCAAGAGTGTGGATTTTG...TCCACCAATCATACAGTGTGCTATGCTTCTGTGCTGGACACAAATTTCTATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
||
| CDS-3UTR TCA 90 bp | AAGTTAATGTTCCAAAGAACCTGCCATCCTGAAGAGTTCTGCACATTAATCAATCTGTTGACATGCGACTaGGACACTATTGCAGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: KLMFQRTCHPEEFCTLINLLTCD*DTIAGN Trigger: ATTTCCTGCAATAGTGTCTCAGTCGCATGTCAACAG...ATTGATTAATGTGCAGAACTCTTCAGGATGGCAGGTTCTTTGGAACATTAACTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099488.11 |
||
| CDS-3UTR TCA 90 bp | CAAGTTTATAGAAATTTGTGTCCAGCACAGAAGCATAGCACACTGTATGATTGGGGGATTATGAGTTCTTaGTCTTCCTCTGACCAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: QVYRNLCPAQKHSTLYDWGIMSS*SSSDQY Trigger: ATACTGGTCAGAGGAAGATCAAGAACTCATAATCCC...CCAATCATACAGTGTGCTATGCTTCTGTGCTGGACACAAATTTCTATAAACTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
||
| CDS-3UTR GCA 90 bp | AAGTTAATGTTCCAAAGAACCTGCCATCCTGAAGAGTTCTGCACATTAATCAATCGACTGAGACACTATTaGAGGAAATCAGGTCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: KLMFQRTCHPEEFCTLINRLRHY*RKSGHH Trigger: ATGGTGACCTGATTTCCTGCAATAGTGTCTCAGTCG...ATTGATTAATGTGCAGAACTCTTCAGGATGGCAGGTTCTTTGGAACATTAACTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099488.11 |
||
| CDS-3UTR GCA 90 bp | CAGCTCAGAGCACAAGTTTATAGAAATTTGTGTCCAGCACAGAAGCATAGCACACTCCATTTCTTCATGTaGATCTTTCACAAAATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QLRAQVYRNLCPAQKHSTLHFFM*IFHKIH Trigger: GTGGATTTTGTGAAAGATGCACATGAAGAAATGGAG...TGTGCTATGCTTCTGTGCTGGACACAAATTTCTATAAACTTGTGCTCTGAGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
||
| CDS-3UTR CCA 90 bp | AAGTTAATGTTCCAAAGAACCTGCCATCCTGAAGAGTTCTGCACATTAATCAATCAAAATCCACACTCTTaGTCAGCATCAAAAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KLMFQRTCHPEEFCTLINQNPHS*SASKGL Trigger: CAGCCCTTTTGATGCTGACCAAGAGTGTGGATTTTG...ATTGATTAATGTGCAGAACTCTTCAGGATGGCAGGTTCTTTGGAACATTAACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099488.11 |
||
| CDS-3UTR TCA 90 bp | AAGTTAATGTTCCAAAGAACCTGCCATCCTGAAGAGTTCTGCACATTAATCAATTCACTGCTGCCTCATTaGGTCTTCTCCAAAACATTT | + |
|
Preference number: 4 (lower is better) Translates to: KLMFQRTCHPEEFCTLINSLLPH*VFSKTF Trigger: AAATGTTTTGGAGAAGACTCAATGAGGCAGCAGTGA...ATTGATTAATGTGCAGAACTCTTCAGGATGGCAGGTTCTTTGGAACATTAACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099488.11 |
||
| CDS-3UTR GCA 90 bp | ATATTGAAACCAATACATCTTGTAAAATGTAAGTTGCTTGGCAGGATCACCTCCCATTCTTCTACAGCCTaGTCCATTTCTTCATGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ILKPIHLVKCKLLGRITSHSSTA*SISSCA Trigger: TGCACATGAAGAAATGGAGCAGGCTGTAGAAGAATG...GGAGGTGATCCTGCCAAGCAACTTACATTTTACAAGATGTATTGGTTTCAATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099488.11 |
||
| CDS-3UTR GCA 90 bp | AAGTTAATGTTCCAAAGAACCTGCCATCCTGAAGAGTTCTGCACATTAATCAATCTCCATTTCTTCATGTaGATCTTTCACAAAATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KLMFQRTCHPEEFCTLINLHFFM*IFHKIH Trigger: GTGGATTTTGTGAAAGATGCACATGAAGAAATGGAG...ATTGATTAATGTGCAGAACTCTTCAGGATGGCAGGTTCTTTGGAACATTAACTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099488.11 |
||
| CDS-3UTR GCA 90 bp | CACAAGTTTATAGAAATTTGTGTCCAGCACAGAAGCATAGCACACTGTATGATTCTCCATTTCTTCATGTaGATCTTTCACAAAATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: HKFIEICVQHRSIAHCMILHFFM*IFHKIH Trigger: GTGGATTTTGTGAAAGATGCACATGAAGAAATGGAG...AATCATACAGTGTGCTATGCTTCTGTGCTGGACACAAATTTCTATAAACTTGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
||
| CDS TCA 90 bp | GGCGATCGCTGGGCTTGCTTGCTGCCAGACCAGCTCCAGGTTCAGTaGGTGAACTGTCTCAGGGTAATCAGGAAGAGTGACAGAGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GDRWACLLPDQLQVQ*VNCLRVIRKSDRAS Trigger: AGAGGCTCTGTCACTCTTCCTGATTACCCTGAGACAGTTCACTCACTGAACCTGGAGCTGGTCTGGCAGCAAGCAAGCCCAGCGATCGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099488.11 ENSMUST00000171260.3 |
||
| CDS TCA 90 bp | CCTCATCCTTCTTTCCATTCTCAGCCACCAAGATCCGGATTTTCTTaGGTGAAGCTCGGGATGCTCTCACCAGCGCCAGGCACGGGATTA | + |
|
Preference number: 5 (lower is better) Translates to: PHPSFHSQPPRSGFS*VKLGMLSPAPGTGL Trigger: TAATCCCGTGCCTGGCGCTGGTGAGAGCATCCCGAGCTTCACTCAAGAAAATCCGGATCTTGGTGGCTGAGAATGGAAAGAAGGATGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060455.15 ENSMUST00000099488.11 ENSMUST00000099489.9 ENSMUST00000171260.3 |
||
| CDS CCA 90 bp | AGTCTTCTCCAAAACATTTCTCGATTAAATTCCTCCGCTGTCTCCTaGGCTTCGCCGACCCGTACTCGAGGCAGAAGTGACCGTAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SLLQNISRLNSSAVS*ASPTRTRGRSDRSS Trigger: GGAGCTACGGTCACTTCTGCCTCGAGTACGGGTCGGCGAAGCCCAGGAGACAGCGGAGGAATTTAATCGAGAAATGTTTTGGAGAAGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060455.15 ENSMUST00000099488.11 ENSMUST00000171260.3 |
||
| CDS CCA 90 bp | GAGTCCCGATTGCTGGGAAGCCCTAACACACCATCCTCATCACTGTaGCTGTCGGAGTTGTCTTCAGAATCATTCAAGAGGCCGCTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: ESRLLGSPNTPSSSL*LSELSSESFKRPLY Trigger: GTACAGCGGCCTCTTGAATGATTCTGAAGACAACTCCGACAGCCACAGTGATGAGGATGGTGTGTTAGGGCTTCCCAGCAATCGGGACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060455.15 ENSMUST00000099488.11 ENSMUST00000099489.9 ENSMUST00000171260.3 |
||
| CDS CCA 90 bp | CACCAATTTCGCAGAACTGATCCGCACAGTGAGGTGGCACACAGGTaGGTATATGCTCAGAACCAAGTCATCCACACTGGGGCTGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: HQFRRTDPHSEVAHR*VYAQNQVIHTGADL Trigger: GAGATCAGCCCCAGTGTGGATGACTTGGTTCTGAGCATATACCCACCTGTGTGCCACCTCACTGTGCGGATCAGTTCTGCGAAATTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
||
| CDS CCA 90 bp | TGTCCACACATTCACACTGATCCGCACAGTGAGGTGGCACACAGGTaGGTATATGCTCAGAACCAAGTCATCCACACTGGGGCTGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: CPHIHTDPHSEVAHR*VYAQNQVIHTGADL Trigger: GAGATCAGCCCCAGTGTGGATGACTTGGTTCTGAGCATATACCCACCTGTGTGCCACCTCACTGTGCGGATCAGTGTGAATGTGTGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099488.11 ENSMUST00000171260.3 |
||
| CDS CCA 90 bp | GAGCCTCTGAGTGTCCACACATTCACACTGATCCGCACAGTGAGGTaGCACACAGGTGGGTATATGCTCAGAACCAAGTCATCCACACTG | + |
|
Preference number: 5 (lower is better) Translates to: EPLSVHTFTLIRTVR*HTGGYMLRTKSSTL Trigger: CAGTGTGGATGACTTGGTTCTGAGCATATACCCACCTGTGTGCCACCTCACTGTGCGGATCAGTGTGAATGTGTGGACACTCAGAGGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099488.11 ENSMUST00000171260.3 |
||
| CDS TCA 90 bp | ATCCTTCTTTCCATTCTCAGCCACCAAGATCCGGATTTTCTTGAGTaGAGCTCGGGATGCTCTCACCAGCGCCAGGCACGGGATTATGAG | + |
|
Preference number: 5 (lower is better) Translates to: ILLSILSHQDPDFLE*SSGCSHQRQARDYE Trigger: CTCATAATCCCGTGCCTGGCGCTGGTGAGAGCATCCCGAGCTTCACTCAAGAAAATCCGGATCTTGGTGGCTGAGAATGGAAAGAAGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060455.15 ENSMUST00000099488.11 ENSMUST00000099489.9 ENSMUST00000171260.3 |
||
| CDS CCA 90 bp | ACACTGGGGCTGATCTCATCAGAAATGTCCACAATGTCATCCAGCTaGGCCACCTCATCCTTCTTTCCATTCTCAGCCACCAAGATCCGG | + |
|
Preference number: 5 (lower is better) Translates to: TLGLISSEMSTMSSS*ATSSFFPFSATKIR Trigger: CCGGATCTTGGTGGCTGAGAATGGAAAGAAGGATGAGGTGGCCCAGCTGGATGACATTGTGGACATTTCTGATGAGATCAGCCCCAGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060455.15 ENSMUST00000099488.11 ENSMUST00000099489.9 ENSMUST00000171260.3 |
||
| CDS-3UTR CAA 90 bp | CCAATACATCTTGTAAAATGTAAGTTGCTTGGCAGGATCACCTCCCTGCCAGTTGATCGCTGGGCTTGCTaGCTGCCAGACCAGCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PIHLVKCKLLGRITSLPVDRWAC*LPDQLQ Trigger: CTGGAGCTGGTCTGGCAGCAAGCAAGCCCAGCGATC...AACTGGCAGGGAGGTGATCCTGCCAAGCAACTTACATTTTACAAGATGTATTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099488.11 |
||
| CDS-3UTR CAA 90 bp | AGGACAGAGGCTGCCTTTCTATCGAGCAAACACCCTGTCAAAGCTCCACTTCTAGATGGCAATACGGACTaGCTCACAGATCCTCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: RTEAAFLSSKHPVKAPLLDGNTD*LTDPLG Trigger: ACCCAGAGGATCTGTGAGCAAGTCCGTATTGCCATC...TAGAAGTGGAGCTTTGACAGGGTGTTTGCTCGATAGAAAGGCAGCCTCTGTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
||
| CDS-3UTR CAA 90 bp | TTCTTAAGGACAGAGGCTGCCTTTCTATCGAGCAAACACCCTGTCAAAGCTCCAGCGACTGAGACACTATaGCAGGAAATCAGGTCACCA | + |
|
Preference number: 5 (lower is better) Translates to: FLRTEAAFLSSKHPVKAPATETL*QEIRSP Trigger: TGGTGACCTGATTTCCTGCAATAGTGTCTCAGTCGC...TGGAGCTTTGACAGGGTGTTTGCTCGATAGAAAGGCAGCCTCTGTCCTTAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
||
| CDS-3UTR CAA 90 bp | AGGACAGAGGCTGCCTTTCTATCGAGCAAACACCCTGTCAAAGCTCCACTTCTACGGCTTTGTTATCTTTaGGGATCTCAGGCACCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: RTEAAFLSSKHPVKAPLLRLCYL*GSQAPV Trigger: AACAGGTGCCTGAGATCCCAAAAGATAACAAAGCCG...TAGAAGTGGAGCTTTGACAGGGTGTTTGCTCGATAGAAAGGCAGCCTCTGTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
||
| CDS TCA 90 bp | GGCTTTGTTATCTTTTGGGATCTCAGGCACCTGTTGACATGCGACTaGGACACTATTGCAGGAAATCAGGTCACCATTCTCAGTGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GFVIFWDLRHLLTCD*DTIAGNQVTILSAL Trigger: CAGAGCACTGAGAATGGTGACCTGATTTCCTGCAATAGTGTCTCAGTCGCATGTCAACAGGTGCCTGAGATCCCAAAAGATAACAAAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060455.15 ENSMUST00000099488.11 ENSMUST00000099489.9 ENSMUST00000171260.3 |
||
| CDS TCA 90 bp | AAAAGGGCTGCGGCTTTGTTATCTTTTGGGATCTCAGGCACCTGTTaGCATGCGACTGAGACACTATTGCAGGAAATCAGGTCACCATTC | + |
|
Preference number: 5 (lower is better) Translates to: KRAAALLSFGISGTC*HATETLLQEIRSPF Trigger: GAATGGTGACCTGATTTCCTGCAATAGTGTCTCAGTCGCATGTCAACAGGTGCCTGAGATCCCAAAAGATAACAAAGCCGCAGCCCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060455.15 ENSMUST00000099488.11 ENSMUST00000099489.9 ENSMUST00000171260.3 |
||
| CDS CCA 90 bp | ATTAAAACAGACACCAATTTCGCAGAACTGATCCGCACAGTGAGGTaGCACACAGGTGGGTATATGCTCAGAACCAAGTCATCCACACTG | + |
|
Preference number: 5 (lower is better) Translates to: IKTDTNFAELIRTVR*HTGGYMLRTKSSTL Trigger: CAGTGTGGATGACTTGGTTCTGAGCATATACCCACCTGTGTGCCACCTCACTGTGCGGATCAGTTCTGCGAAATTGGTGTCTGTTTTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
||
| CDS GCA 90 bp | GCTGTACGGGTCACATTCTTCTACAGCCTGCTCCATTTCTTCATGTaGATCTTTCACAAAATCCACACTCTTGGTCAGCATCAAAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: AVRVTFFYSLLHFFM*IFHKIHTLGQHQKG Trigger: GCCCTTTTGATGCTGACCAAGAGTGTGGATTTTGTGAAAGATGCACATGAAGAAATGGAGCAGGCTGTAGAAGAATGTGACCCGTACAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060455.15 ENSMUST00000099488.11 ENSMUST00000099489.9 ENSMUST00000171260.3 |
||
| CDS-3UTR CAA 90 bp | CCAATACATCTTGTAAAATGTAAGTTGCTTGGCAGGATCACCTCCCTGCCAGTTGCGACTGAGACACTATaGCAGGAAATCAGGTCACCA | + |
|
Preference number: 5 (lower is better) Translates to: PIHLVKCKLLGRITSLPVATETL*QEIRSP Trigger: TGGTGACCTGATTTCCTGCAATAGTGTCTCAGTCGC...AACTGGCAGGGAGGTGATCCTGCCAAGCAACTTACATTTTACAAGATGTATTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099488.11 |
||
| CDS-3UTR CAA 90 bp | TTCTTAAGGACAGAGGCTGCCTTTCTATCGAGCAAACACCCTGTCAAAGCTCCAACAAAATCCACACTCTaGGTCAGCATCAAAAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: FLRTEAAFLSSKHPVKAPTKSTL*VSIKRA Trigger: AGCCCTTTTGATGCTGACCAAGAGTGTGGATTTTGT...TGGAGCTTTGACAGGGTGTTTGCTCGATAGAAAGGCAGCCTCTGTCCTTAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
||
| CDS-3UTR CAA 90 bp | CTCAGAGCACAAGTTTATAGAAATTTGTGTCCAGCACAGAAGCATAGCACACTGCAGTATGAGTCCCGATaGCTGGGAAGCCCTAACACA | + |
|
Preference number: 5 (lower is better) Translates to: LRAQVYRNLCPAQKHSTLQYESR*LGSPNT Trigger: TGTGTTAGGGCTTCCCAGCAATCGGGACTCATACTG...CAGTGTGCTATGCTTCTGTGCTGGACACAAATTTCTATAAACTTGTGCTCTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
||
| CDS GCA 90 bp | GAAGTGCGTTGTCAGAACAGTGGCTTCCCCGTTCACTTTCACTGCTaGCTCATTGAGTCTTCTCCAAAACATTTCTCGATTAAATTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: EVRCQNSGFPVHFHC*LIESSPKHFSIKFL Trigger: GAGGAATTTAATCGAGAAATGTTTTGGAGAAGACTCAATGAGGCAGCAGTGAAAGTGAACGGGGAAGCCACTGTTCTGACAACGCACTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060455.15 ENSMUST00000099488.11 ENSMUST00000171260.3 |
||
| CDS CCA 90 bp | ATAATTATTTCCTCGATGGCAATACGGACTTGCTCACAGATCCTCTaGGTTTCCTGTGGAGATGGCCATGGAAGTTTAGAGAAGTGCGTT | + |
|
Preference number: 5 (lower is better) Translates to: IIISSMAIRTCSQIL*VSCGDGHGSLEKCV Trigger: AACGCACTTCTCTAAACTTCCATGGCCATCTCCACAGGAAACCCAGAGGATCTGTGAGCAAGTCCGTATTGCCATCGAGGAAATAATTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060455.15 ENSMUST00000099488.11 ENSMUST00000099489.9 ENSMUST00000171260.3 |
||
| CDS-3UTR CAA 90 bp | CCAATACATCTTGTAAAATGTAAGTTGCTTGGCAGGATCACCTCCCTGCCAGTTCTGTGGCTGTCGGAGTaGTCTTCAGAATCATTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: PIHLVKCKLLGRITSLPVLWLSE*SSESFK Trigger: CTTGAATGATTCTGAAGACAACTCCGACAGCCACAG...AACTGGCAGGGAGGTGATCCTGCCAAGCAACTTACATTTTACAAGATGTATTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099488.11 |
||
| CDS GCA 90 bp | AGAGAAGTGCGTTGTCAGAACAGTGGCTTCCCCGTTCACTTTCACTaGTGCCTCATTGAGTCTTCTCCAAAACATTTCTCGATTAAATTC | + |
|
Preference number: 5 (lower is better) Translates to: REVRCQNSGFPVHFH*CLIESSPKHFSIKF Trigger: GAATTTAATCGAGAAATGTTTTGGAGAAGACTCAATGAGGCAGCAGTGAAAGTGAACGGGGAAGCCACTGTTCTGACAACGCACTTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060455.15 ENSMUST00000099488.11 ENSMUST00000171260.3 |
||
| CDS-3UTR CAA 90 bp | AGCTCAGAGCACAAGTTTATAGAAATTTGTGTCCAGCACAGAAGCATAGCACACCTGTGGCTGTCGGAGTaGTCTTCAGAATCATTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SSEHKFIEICVQHRSIAHLWLSE*SSESFK Trigger: CTTGAATGATTCTGAAGACAACTCCGACAGCCACAG...GTGTGCTATGCTTCTGTGCTGGACACAAATTTCTATAAACTTGTGCTCTGAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
||
| CDS-3UTR CAA 90 bp | TTTATAGAAATTTGTGTCCAGCACAGAAGCATAGCACACTGTATGATTGGTGGACAGTATGAGTCCCGATaGCTGGGAAGCCCTAACACA | + |
|
Preference number: 5 (lower is better) Translates to: FIEICVQHRSIAHCMIGGQYESR*LGSPNT Trigger: TGTGTTAGGGCTTCCCAGCAATCGGGACTCATACTG...TCCACCAATCATACAGTGTGCTATGCTTCTGTGCTGGACACAAATTTCTATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
||
| CDS-3UTR CAA 90 bp | ATATTGAAACCAATACATCTTGTAAAATGTAAGTTGCTTGGCAGGATCACCTCCGATGGCAATACGGACTaGCTCACAGATCCTCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: ILKPIHLVKCKLLGRITSDGNTD*LTDPLG Trigger: ACCCAGAGGATCTGTGAGCAAGTCCGTATTGCCATC...GGAGGTGATCCTGCCAAGCAACTTACATTTTACAAGATGTATTGGTTTCAATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099488.11 |
||
| CDS-3UTR CAA 90 bp | CACAAGTTTATAGAAATTTGTGTCCAGCACAGAAGCATAGCACACTGTATGATTGATGGCAATACGGACTaGCTCACAGATCCTCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: HKFIEICVQHRSIAHCMIDGNTD*LTDPLG Trigger: ACCCAGAGGATCTGTGAGCAAGTCCGTATTGCCATC...AATCATACAGTGTGCTATGCTTCTGTGCTGGACACAAATTTCTATAAACTTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
||
| CDS-3UTR CAA 90 bp | TTTATAGAAATTTGTGTCCAGCACAGAAGCATAGCACACTGTATGATTGGTGGAGCGACTGAGACACTATaGCAGGAAATCAGGTCACCA | + |
|
Preference number: 5 (lower is better) Translates to: FIEICVQHRSIAHCMIGGATETL*QEIRSP Trigger: TGGTGACCTGATTTCCTGCAATAGTGTCTCAGTCGC...TCCACCAATCATACAGTGTGCTATGCTTCTGTGCTGGACACAAATTTCTATAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
||
| CDS-3UTR CAA 90 bp | AGCTCAGAGCACAAGTTTATAGAAATTTGTGTCCAGCACAGAAGCATAGCACACACAAAATCCACACTCTaGGTCAGCATCAAAAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SSEHKFIEICVQHRSIAHTKSTL*VSIKRA Trigger: AGCCCTTTTGATGCTGACCAAGAGTGTGGATTTTGT...GTGTGCTATGCTTCTGTGCTGGACACAAATTTCTATAAACTTGTGCTCTGAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
||
| CDS-3UTR CAA 90 bp | ATATTGAAACCAATACATCTTGTAAAATGTAAGTTGCTTGGCAGGATCACCTCCCAGTATGAGTCCCGATaGCTGGGAAGCCCTAACACA | + |
|
Preference number: 5 (lower is better) Translates to: ILKPIHLVKCKLLGRITSQYESR*LGSPNT Trigger: TGTGTTAGGGCTTCCCAGCAATCGGGACTCATACTG...GGAGGTGATCCTGCCAAGCAACTTACATTTTACAAGATGTATTGGTTTCAATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099488.11 |
||
| CDS TCA 90 bp | ATTCCGTACCAGCTTTCTCAGGGTGATTCCCTGGTCCTTAGGAAGTaGATAATACACTATAATTATTTCCTCGATGGCAATACGGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: IPYQLSQGDSLVLRK*IIHYNYFLDGNTDL Trigger: CAAGTCCGTATTGCCATCGAGGAAATAATTATAGTGTATTATTCACTTCCTAAGGACCAGGGAATCACCCTGAGAAAGCTGGTACGGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060455.15 ENSMUST00000099488.11 ENSMUST00000099489.9 ENSMUST00000171260.3 |
||
| CDS-3UTR CAA 90 bp | CTCAGAGCACAAGTTTATAGAAATTTGTGTCCAGCACAGAAGCATAGCACACTGTTCACTGCTGCCTCATaGAGTCTTCTCCAAAACATT | + |
|
Preference number: 5 (lower is better) Translates to: LRAQVYRNLCPAQKHSTLFTAAS*SLLQNI Trigger: AATGTTTTGGAGAAGACTCAATGAGGCAGCAGTGAA...CAGTGTGCTATGCTTCTGTGCTGGACACAAATTTCTATAAACTTGTGCTCTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060455.15 |
||
| CDS-3UTR CAA 90 bp | TTTATAGAAATTTGTGTCCAGCACAGAAGCATAGCACACTGTATGATTGGTGGACGGCTTTGTTATCTTTaGGGATCTCAGGCACCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: FIEICVQHRSIAHCMIGGRLCYL*GSQAPV Trigger: AACAGGTGCCTGAGATCCCAAAAGATAACAAAGCCG...TCCACCAATCATACAGTGTGCTATGCTTCTGTGCTGGACACAAATTTCTATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
||
| CDS-3UTR CAA 90 bp | CAAGTTTATAGAAATTTGTGTCCAGCACAGAAGCATAGCACACTGTATGATTGGCTGTGGCTGTCGGAGTaGTCTTCAGAATCATTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: QVYRNLCPAQKHSTLYDWLWLSE*SSESFK Trigger: CTTGAATGATTCTGAAGACAACTCCGACAGCCACAG...CCAATCATACAGTGTGCTATGCTTCTGTGCTGGACACAAATTTCTATAAACTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
||
| CDS-3UTR CAA 90 bp | ATATTGAAACCAATACATCTTGTAAAATGTAAGTTGCTTGGCAGGATCACCTCCCGGCTTTGTTATCTTTaGGGATCTCAGGCACCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: ILKPIHLVKCKLLGRITSRLCYL*GSQAPV Trigger: AACAGGTGCCTGAGATCCCAAAAGATAACAAAGCCG...GGAGGTGATCCTGCCAAGCAACTTACATTTTACAAGATGTATTGGTTTCAATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099488.11 |
||
| CDS-3UTR CAA 90 bp | ATATTGAAACCAATACATCTTGTAAAATGTAAGTTGCTTGGCAGGATCACCTCCACAAAATCCACACTCTaGGTCAGCATCAAAAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ILKPIHLVKCKLLGRITSTKSTL*VSIKRA Trigger: AGCCCTTTTGATGCTGACCAAGAGTGTGGATTTTGT...GGAGGTGATCCTGCCAAGCAACTTACATTTTACAAGATGTATTGGTTTCAATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099488.11 |
||
| CDS-3UTR CAA 90 bp | ATATTGAAACCAATACATCTTGTAAAATGTAAGTTGCTTGGCAGGATCACCTCCTTCACTGCTGCCTCATaGAGTCTTCTCCAAAACATT | + |
|
Preference number: 5 (lower is better) Translates to: ILKPIHLVKCKLLGRITSFTAAS*SLLQNI Trigger: AATGTTTTGGAGAAGACTCAATGAGGCAGCAGTGAA...GGAGGTGATCCTGCCAAGCAACTTACATTTTACAAGATGTATTGGTTTCAATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099488.11 |
||
| CDS CCA 72 bp | ACTCCAGCGCTGTGGGCACAGAGGCAAGGCGATCGCTaGGCTTGCTTGCTGCCAGACCAGCTCCAGGTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: TPALWAQRQGDR*ACLLPDQLQVQ Trigger: CTGAACCTGGAGCTGGTCTGGCAGCAAGCAAGCCCAGCGATCGCCTTGCCTCTGTGCCCACAGCGCTGGAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099488.11 ENSMUST00000171260.3 |
||
| CDS TCA 72 bp | TCCATTCTCAGCCACCAAGATCCGGATTTTCTTGAGTaGAGCTCGGGATGCTCTCACCAGCGCCAGGCACGG | + |
|
Preference number: 6 (lower is better) Translates to: SILSHQDPDFLE*SSGCSHQRQAR Trigger: CCGTGCCTGGCGCTGGTGAGAGCATCCCGAGCTTCACTCAAGAAAATCCGGATCTTGGTGGCTGAGAATGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060455.15 ENSMUST00000099488.11 ENSMUST00000099489.9 ENSMUST00000171260.3 |
||
| CDS TCA 72 bp | CTCGGGATGCTCTCACCAGCGCCAGGCACGGGATTATaGGTTCTTGATCTTCCTCTGACCAGTATGAGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: LGMLSPAPGTGL*VLDLPLTSMSP Trigger: GGGACTCATACTGGTCAGAGGAAGATCAAGAACTCATAATCCCGTGCCTGGCGCTGGTGAGAGCATCCCGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060455.15 ENSMUST00000099488.11 ENSMUST00000099489.9 ENSMUST00000171260.3 |
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| CDS CCA 72 bp | CGCAGAACTGATCCGCACAGTGAGGTGGCACACAGGTaGGTATATGCTCAGAACCAAGTCATCCACACTGGG | + |
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Preference number: 6 (lower is better) Translates to: RRTDPHSEVAHR*VYAQNQVIHTG Trigger: CCCAGTGTGGATGACTTGGTTCTGAGCATATACCCACCTGTGTGCCACCTCACTGTGCGGATCAGTTCTGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060455.15 ENSMUST00000099489.9 |
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| CDS TCA 72 bp | GCTCTCACCAGCGCCAGGCACGGGATTATGAGTTCTTaGTCTTCCTCTGACCAGTATGAGTCCCGATTGCTG | + |
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Preference number: 6 (lower is better) Translates to: ALTSARHGIMSS*SSSDQYESRLL Trigger: CAGCAATCGGGACTCATACTGGTCAGAGGAAGATCAAGAACTCATAATCCCGTGCCTGGCGCTGGTGAGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060455.15 ENSMUST00000099488.11 ENSMUST00000099489.9 ENSMUST00000171260.3 |
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| CDS TCA 72 bp | TGGGCTTGCTTGCTGCCAGACCAGCTCCAGGTTCAGTaGGTGAACTGTCTCAGGGTAATCAGGAAGAGTGAC | + |
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Preference number: 6 (lower is better) Translates to: WACLLPDQLQVQ*VNCLRVIRKSD Trigger: GTCACTCTTCCTGATTACCCTGAGACAGTTCACTCACTGAACCTGGAGCTGGTCTGGCAGCAAGCAAGCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099488.11 ENSMUST00000171260.3 |
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| CDS CAA 90 bp | ACCTCATCCTTCTTTCCATTCTCAGCCACCAAGATCCGGATTTTCTaGAGTGAAGCTCGGGATGCTCTCACCAGCGCCAGGCACGGGATT | + |
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Preference number: 6 (lower is better) Translates to: TSSFFPFSATKIRIF*SEARDALTSARHGI Trigger: AATCCCGTGCCTGGCGCTGGTGAGAGCATCCCGAGCTTCACTCAAGAAAATCCGGATCTTGGTGGCTGAGAATGGAAAGAAGGATGAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060455.15 ENSMUST00000099488.11 ENSMUST00000099489.9 ENSMUST00000171260.3 |
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| CDS CCA 72 bp | CAAAACATTTCTCGATTAAATTCCTCCGCTGTCTCCTaGGCTTCGCCGACCCGTACTCGAGGCAGAAGTGAC | + |
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Preference number: 6 (lower is better) Translates to: QNISRLNSSAVS*ASPTRTRGRSD Trigger: GTCACTTCTGCCTCGAGTACGGGTCGGCGAAGCCCAGGAGACAGCGGAGGAATTTAATCGAGAAATGTTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060455.15 ENSMUST00000099488.11 ENSMUST00000171260.3 |
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| CDS CAA 72 bp | CCTAACACACCATCCTCATCACTGTGGCTGTCGGAGTaGTCTTCAGAATCATTCAAGAGGCCGCTGTACGGG | + |
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Preference number: 6 (lower is better) Translates to: PNTPSSSLWLSE*SSESFKRPLYG Trigger: CCCGTACAGCGGCCTCTTGAATGATTCTGAAGACAACTCCGACAGCCACAGTGATGAGGATGGTGTGTTAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060455.15 ENSMUST00000099488.11 ENSMUST00000099489.9 ENSMUST00000171260.3 |
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| CDS CAA 72 bp | TTCTTTCCATTCTCAGCCACCAAGATCCGGATTTTCTaGAGTGAAGCTCGGGATGCTCTCACCAGCGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: FFPFSATKIRIF*SEARDALTSAR Trigger: CCTGGCGCTGGTGAGAGCATCCCGAGCTTCACTCAAGAAAATCCGGATCTTGGTGGCTGAGAATGGAAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060455.15 ENSMUST00000099488.11 ENSMUST00000099489.9 ENSMUST00000171260.3 |
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| CDS CAA 90 bp | CTGGGAAGCCCTAACACACCATCCTCATCACTGTGGCTGTCGGAGTaGTCTTCAGAATCATTCAAGAGGCCGCTGTACGGGTCACATTCT | + |
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Preference number: 6 (lower is better) Translates to: LGSPNTPSSSLWLSE*SSESFKRPLYGSHS Trigger: AGAATGTGACCCGTACAGCGGCCTCTTGAATGATTCTGAAGACAACTCCGACAGCCACAGTGATGAGGATGGTGTGTTAGGGCTTCCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060455.15 ENSMUST00000099488.11 ENSMUST00000099489.9 ENSMUST00000171260.3 |
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| CDS CCA 72 bp | CTCACAGATCCTCTGGGTTTCCTGTGGAGATGGCCATaGAAGTTTAGAGAAGTGCGTTGTCAGAACAGTGGC | + |
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Preference number: 6 (lower is better) Translates to: LTDPLGFLWRWP*KFREVRCQNSG Trigger: GCCACTGTTCTGACAACGCACTTCTCTAAACTTCCATGGCCATCTCCACAGGAAACCCAGAGGATCTGTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060455.15 ENSMUST00000099488.11 ENSMUST00000099489.9 ENSMUST00000171260.3 |
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| CDS CAA 90 bp | CCACACTCTTGGTCAGCATCAAAAGGGCTGCGGCTTTGTTATCTTTaGGGATCTCAGGCACCTGTTGACATGCGACTGAGACACTATTGC | + |
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Preference number: 6 (lower is better) Translates to: PHSWSASKGLRLCYL*GSQAPVDMRLRHYC Trigger: GCAATAGTGTCTCAGTCGCATGTCAACAGGTGCCTGAGATCCCAAAAGATAACAAAGCCGCAGCCCTTTTGATGCTGACCAAGAGTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060455.15 ENSMUST00000099488.11 ENSMUST00000099489.9 ENSMUST00000171260.3 |
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| CDS GCA 72 bp | TCTCAGGCACCTGTTGACATGCGACTGAGACACTATTaGAGGAAATCAGGTCACCATTCTCAGTGCTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: SQAPVDMRLRHY*RKSGHHSQCSE Trigger: CTCAGAGCACTGAGAATGGTGACCTGATTTCCTGCAATAGTGTCTCAGTCGCATGTCAACAGGTGCCTGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060455.15 ENSMUST00000099488.11 ENSMUST00000099489.9 ENSMUST00000171260.3 |
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| CDS GCA 72 bp | GTTCTTGATCTTCCTCTGACCAGTATGAGTCCCGATTaGTGGGAAGCCCTAACACACCATCCTCATCACTGT | + |
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Preference number: 6 (lower is better) Translates to: VLDLPLTSMSPD*WEALTHHPHHC Trigger: ACAGTGATGAGGATGGTGTGTTAGGGCTTCCCAGCAATCGGGACTCATACTGGTCAGAGGAAGATCAAGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060455.15 ENSMUST00000099488.11 ENSMUST00000099489.9 ENSMUST00000171260.3 |
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| CDS CCA 72 bp | TTGCTGGGAAGCCCTAACACACCATCCTCATCACTGTaGCTGTCGGAGTTGTCTTCAGAATCATTCAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: LLGSPNTPSSSL*LSELSSESFKR Trigger: CCTCTTGAATGATTCTGAAGACAACTCCGACAGCCACAGTGATGAGGATGGTGTGTTAGGGCTTCCCAGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060455.15 ENSMUST00000099488.11 ENSMUST00000099489.9 ENSMUST00000171260.3 |
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| CDS CCA 72 bp | CTGATCTCATCAGAAATGTCCACAATGTCATCCAGCTaGGCCACCTCATCCTTCTTTCCATTCTCAGCCACC | + |
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Preference number: 6 (lower is better) Translates to: LISSEMSTMSSS*ATSSFFPFSAT Trigger: GGTGGCTGAGAATGGAAAGAAGGATGAGGTGGCCCAGCTGGATGACATTGTGGACATTTCTGATGAGATCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060455.15 ENSMUST00000099488.11 ENSMUST00000099489.9 ENSMUST00000171260.3 |
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| CDS CAA 72 bp | TGGTCAGCATCAAAAGGGCTGCGGCTTTGTTATCTTTaGGGATCTCAGGCACCTGTTGACATGCGACTGAGA | + |
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Preference number: 6 (lower is better) Translates to: WSASKGLRLCYL*GSQAPVDMRLR Trigger: TCTCAGTCGCATGTCAACAGGTGCCTGAGATCCCAAAAGATAACAAAGCCGCAGCCCTTTTGATGCTGACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060455.15 ENSMUST00000099488.11 ENSMUST00000099489.9 ENSMUST00000171260.3 |
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| CDS TCA 72 bp | GCGGCTTTGTTATCTTTTGGGATCTCAGGCACCTGTTaGCATGCGACTGAGACACTATTGCAGGAAATCAGG | + |
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Preference number: 6 (lower is better) Translates to: AALLSFGISGTC*HATETLLQEIR Trigger: CCTGATTTCCTGCAATAGTGTCTCAGTCGCATGTCAACAGGTGCCTGAGATCCCAAAAGATAACAAAGCCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060455.15 ENSMUST00000099488.11 ENSMUST00000099489.9 ENSMUST00000171260.3 |
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| CDS GCA 72 bp | CGTTGTCAGAACAGTGGCTTCCCCGTTCACTTTCACTaGTGCCTCATTGAGTCTTCTCCAAAACATTTCTCG | + |
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Preference number: 6 (lower is better) Translates to: RCQNSGFPVHFH*CLIESSPKHFS Trigger: CGAGAAATGTTTTGGAGAAGACTCAATGAGGCAGCAGTGAAAGTGAACGGGGAAGCCACTGTTCTGACAACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060455.15 ENSMUST00000099488.11 ENSMUST00000171260.3 |
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| CDS CAA 90 bp | GTTGTCAGAACAGTGGCTTCCCCGTTCACTTTCACTGCTGCCTCATaGAGTCTTCTCCAAAACATTTCTCGATTAAATTCCTCCGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: VVRTVASPFTFTAAS*SLLQNISRLNSSAV Trigger: GACAGCGGAGGAATTTAATCGAGAAATGTTTTGGAGAAGACTCAATGAGGCAGCAGTGAAAGTGAACGGGGAAGCCACTGTTCTGACAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060455.15 ENSMUST00000099488.11 ENSMUST00000171260.3 |
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| CDS GCA 72 bp | TGTCAGAACAGTGGCTTCCCCGTTCACTTTCACTGCTaGCTCATTGAGTCTTCTCCAAAACATTTCTCGATT | + |
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Preference number: 6 (lower is better) Translates to: CQNSGFPVHFHC*LIESSPKHFSI Trigger: AATCGAGAAATGTTTTGGAGAAGACTCAATGAGGCAGCAGTGAAAGTGAACGGGGAAGCCACTGTTCTGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060455.15 ENSMUST00000099488.11 ENSMUST00000171260.3 |
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| CDS GCA 72 bp | TACACTATAATTATTTCCTCGATGGCAATACGGACTTaGTCACAGATCCTCTGGGTTTCCTGTGGAGATGGC | + |
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Preference number: 6 (lower is better) Translates to: YTIIISSMAIRT*SQILWVSCGDG Trigger: GCCATCTCCACAGGAAACCCAGAGGATCTGTGAGCAAGTCCGTATTGCCATCGAGGAAATAATTATAGTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060455.15 ENSMUST00000099488.11 ENSMUST00000099489.9 ENSMUST00000171260.3 |
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| CDS CAA 72 bp | ATACACTATAATTATTTCCTCGATGGCAATACGGACTaGCTCACAGATCCTCTGGGTTTCCTGTGGAGATGG | + |
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Preference number: 6 (lower is better) Translates to: IHYNYFLDGNTD*LTDPLGFLWRW Trigger: CCATCTCCACAGGAAACCCAGAGGATCTGTGAGCAAGTCCGTATTGCCATCGAGGAAATAATTATAGTGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060455.15 ENSMUST00000099488.11 ENSMUST00000099489.9 ENSMUST00000171260.3 |
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| CDS CAA 72 bp | ATTTCTTCATGTGCATCTTTCACAAAATCCACACTCTaGGTCAGCATCAAAAGGGCTGCGGCTTTGTTATCT | + |
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Preference number: 6 (lower is better) Translates to: ISSCASFTKSTL*VSIKRAAALLS Trigger: AGATAACAAAGCCGCAGCCCTTTTGATGCTGACCAAGAGTGTGGATTTTGTGAAAGATGCACATGAAGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060455.15 ENSMUST00000099488.11 ENSMUST00000099489.9 ENSMUST00000171260.3 |
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