Pregenerated sensors for CCND2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000184Ensembl transcript IDs: ENSMUST00000000188.12, ENSMUST00000201066.2, ENSMUST00000201637.2, ENSMUST00000201902.4
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTACCTCCAGTTCCCACACCACTGTCCAGGACACAGGGACAAGTGTaGTCCTCCCAGCCCTGTCCTCATGGAGACAAAGCTCCTCTGCCT | + |
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Preference number: 1 (lower is better) Translates to: LPPVPTPLSRTQGQV*SSQPCPHGDKAPLP Trigger: AGGCAGAGGAGCTTTGTCTCCATGAGGACAGGGCTGGGAGGACCACACTTGTCCCTGTGTCCTGGACAGTGGTGTGGGAACTGGAGGTAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| 3UTR TCA 90 bp | GGCAGGGACACCAGAGCTGGGTACCAGAACATCAGACTCCAGAAATaGACAGTAACTGGACGAGGGTCAGGAAGGGGAGGGGCAAAGGAG | + |
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Preference number: 1 (lower is better) Translates to: GRDTRAGYQNIRLQK*TVTGRGSGRGGAKE Trigger: CTCCTTTGCCCCTCCCCTTCCTGACCCTCGTCCAGTTACTGTTCATTTCTGGAGTCTGATGTTCTGGTACCCAGCTCTGGTGTCCCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| 3UTR GCA 90 bp | GTTTCTCCTGCTTTCTATCAAGGAGGATGTCCAGTTCCTGTCTTCTaGCTGCCCTGTGCCTCGTGCCAGCGGCCTTCCAAACAGATCCGG | + |
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Preference number: 1 (lower is better) Translates to: VSPAFYQGGCPVPVF*LPCASCQRPSKQIR Trigger: CCGGATCTGTTTGGAAGGCCGCTGGCACGAGGCACAGGGCAGGCAGAAGACAGGAACTGGACATCCTCCTTGATAGAAAGCAGGAGAAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| 3UTR CCA 90 bp | GTCCAGGACACAGGGACAAGTGTGGTCCTCCCAGCCCTGTCCTCATaGAGACAAAGCTCCTCTGCCTTCTTTGTGAAAGCCACCCTGTCT | + |
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Preference number: 1 (lower is better) Translates to: VQDTGTSVVLPALSS*RQSSSAFFVKATLS Trigger: AGACAGGGTGGCTTTCACAAAGAAGGCAGAGGAGCTTTGTCTCCATGAGGACAGGGCTGGGAGGACCACACTTGTCCCTGTGTCCTGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| 3UTR GCA 90 bp | CAAGGAGGATGTCCAGTTCCTGTCTTCTGCCTGCCCTGTGCCTCGTaGCAGCGGCCTTCCAAACAGATCCGGTATAGCTGTGAGGTATTA | + |
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Preference number: 1 (lower is better) Translates to: QGGCPVPVFCLPCAS*QRPSKQIRYSCEVL Trigger: TAATACCTCACAGCTATACCGGATCTGTTTGGAAGGCCGCTGGCACGAGGCACAGGGCAGGCAGAAGACAGGAACTGGACATCCTCCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| 3UTR CCA 90 bp | CCCAAGTTGCCCAAGAACTCAAGGGAGTGTGTCTGTCAAGTTCTGTaGGGTCCCTTAAGGACCAGAAGAGTGTGCTGTGCAGTGCGTGAG | + |
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Preference number: 1 (lower is better) Translates to: PKLPKNSRECVCQVL*GPLRTRRVCCAVRE Trigger: CTCACGCACTGCACAGCACACTCTTCTGGTCCTTAAGGGACCCCACAGAACTTGACAGACACACTCCCTTGAGTTCTTGGGCAACTTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| 3UTR GCA 90 bp | AAGTGTGGTCCTCCCAGCCCTGTCCTCATGGAGACAAAGCTCCTCTaGCTTCTTTGTGAAAGCCACCCTGTCTTAGCCTGTTGCTCCTAT | + |
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Preference number: 1 (lower is better) Translates to: KCGPPSPVLMETKLL*LLCESHPVLACCSY Trigger: ATAGGAGCAACAGGCTAAGACAGGGTGGCTTTCACAAAGAAGGCAGAGGAGCTTTGTCTCCATGAGGACAGGGCTGGGAGGACCACACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| 3UTR CCA 90 bp | GATATCAGCAGAGGGCTTTCTCAGCCCTGGCAGGGACACCAGAGCTaGGTACCAGAACATCAGACTCCAGAAATGAACAGTAACTGGACG | + |
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Preference number: 1 (lower is better) Translates to: DISRGLSQPWQGHQS*VPEHQTPEMNSNWT Trigger: CGTCCAGTTACTGTTCATTTCTGGAGTCTGATGTTCTGGTACCCAGCTCTGGTGTCCCTGCCAGGGCTGAGAAAGCCCTCTGCTGATATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| 3UTR GCA 90 bp | GGCATGTCCCTTCTCGTTTCTGATTCCTCCTTGGGTTCACTGCTTTaGAAACTACTCATGCGGTCCTGGCACCCACGGTTCCTTGCAATT | + |
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Preference number: 1 (lower is better) Translates to: GMSLLVSDSSLGSLL*KLLMRSWHPRFLAI Trigger: AATTGCAAGGAACCGTGGGTGCCAGGACCGCATGAGTAGTTTGCAAAGCAGTGAACCCAAGGAGGAATCAGAAACGAGAAGGGACATGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| 3UTR CCA 90 bp | ACAGCCTCTCCCTTCTTTCAACTTGCATTCCAGACTCATTCAACTTaGGCCTCCTACCTTGCCCCACTCAACGGGATCCAAACCCTGAAG | + |
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Preference number: 1 (lower is better) Translates to: TASPFFQLAFQTHST*ASYLAPLNGIQTLK Trigger: CTTCAGGGTTTGGATCCCGTTGAGTGGGGCAAGGTAGGAGGCCCAAGTTGAATGAGTCTGGAATGCAAGTTGAAAGAAGGGAGAGGCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| 3UTR GCA 90 bp | GTGTCTGAATGGGCTACAAGATGGAGGGAGGGTCTCCTAACTGTCTaGCAGAATTCTTCATTGCAGACCCTGGTGCACGCATGCAAATCA | + |
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Preference number: 1 (lower is better) Translates to: VSEWATRWREGLLTV*QNSSLQTLVHACKS Trigger: TGATTTGCATGCGTGCACCAGGGTCTGCAATGAAGAATTCTGGCAGACAGTTAGGAGACCCTCCCTCCATCTTGTAGCCCATTCAGACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| 3UTR GCA 90 bp | ACTGCTTTGCAAACTACTCATGCGGTCCTGGCACCCACGGTTCCTTaGAATTCTACTAAAGGGGGCATATGCACTAGGTCACAAGCACAA | + |
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Preference number: 1 (lower is better) Translates to: TALQTTHAVLAPTVP*NSTKGGICTRSQAQ Trigger: TTGTGCTTGTGACCTAGTGCATATGCCCCCTTTAGTAGAATTGCAAGGAACCGTGGGTGCCAGGACCGCATGAGTAGTTTGCAAAGCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| 3UTR GCA 90 bp | AAATACACCCGAGACCACAGAAACAGCCTCTCCCTTCTTTCAACTTaGATTCCAGACTCATTCAACTTGGGCCTCCTACCTTGCCCCACT | + |
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Preference number: 1 (lower is better) Translates to: KYTRDHRNSLSLLST*IPDSFNLGLLPCPT Trigger: AGTGGGGCAAGGTAGGAGGCCCAAGTTGAATGAGTCTGGAATGCAAGTTGAAAGAAGGGAGAGGCTGTTTCTGTGGTCTCGGGTGTATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| 3UTR CCA 90 bp | CACCCTGTCTTAGCCTGTTGCTCCTATAATTCCCAAGGCACAGTCTaGTGGGTCCCCAAAGAGCTAGACTATAGGAAAGCTCTTAAGCTC | + |
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Preference number: 1 (lower is better) Translates to: HPVLACCSYNSQGTV*WVPKELDYRKALKL Trigger: GAGCTTAAGAGCTTTCCTATAGTCTAGCTCTTTGGGGACCCACCAGACTGTGCCTTGGGAATTATAGGAGCAACAGGCTAAGACAGGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| 3UTR GCA 90 bp | TGTCTTAGGTTCCAGGTAAGAGGGATGGAGGGGCAGATAGTAACCTaGCTCTCCCCTTGTGTGTCAGCTTCCTTCATTCAATGTTTCAGT | + |
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Preference number: 1 (lower is better) Translates to: CLRFQVRGMEGQIVT*LSPCVSASFIQCFS Trigger: ACTGAAACATTGAATGAAGGAAGCTGACACACAAGGGGAGAGGCAGGTTACTATCTGCCCCTCCATCCCTCTTACCTGGAACCTAAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| 3UTR TCA 90 bp | TATCCCAACCATAAACCCCACCCACACCTGTTAGAGAGTACACCGTaGGAGAACAACATTGATTTGATATGGCATCGCACTCTTAAAGCA | + |
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Preference number: 1 (lower is better) Translates to: YPNHKPHPHLLESTP*ENNIDLIWHRTLKA Trigger: TGCTTTAAGAGTGCGATGCCATATCAAATCAATGTTGTTCTCTCACGGTGTACTCTCTAACAGGTGTGGGTGGGGTTTATGGTTGGGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| 3UTR-3UTR GCA 90 bp | TGTCTGCCAGAATTCTTCATTGCAGACCCTGGTGCACGCATGCAAATCAGGCTGCTGCCCTGTGCCTCGTaGCAGCGGCCTTCCAAACAG | + |
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Preference number: 2 (lower is better) Translates to: CLPEFFIADPGARMQIRLLPCAS*QRPSKQ Trigger: CTGTTTGGAAGGCCGCTGGCACGAGGCACAGGGCAG...CAGCCTGATTTGCATGCGTGCACCAGGGTCTGCAATGAAGAATTCTGGCAGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| 3UTR-3UTR GCA 90 bp | CTTTGTGTAAGTGAGGAGCAGGCAGAATGGCCACTCTACAGGACTCGTTCCACTCCAGTTCCTGTCTTCTaGCTGCCCTGTGCCTCGTGC | + |
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Preference number: 2 (lower is better) Translates to: LCVSEEQAEWPLYRTRSTPVPVF*LPCASC Trigger: GCACGAGGCACAGGGCAGGCAGAAGACAGGAACTGG...AGTGGAACGAGTCCTGTAGAGTGGCCATTCTGCCTGCTCCTCACTTACACAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| 3UTR-3UTR GCA 90 bp | CTTTGTGTAAGTGAGGAGCAGGCAGAATGGCCACTCTACAGGACTCGTTCCACTTTGGGCCTCCTACCTTaGCCCACTCAACGGGATCCA | + |
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Preference number: 2 (lower is better) Translates to: LCVSEEQAEWPLYRTRSTLGLLP*PTQRDP Trigger: TGGATCCCGTTGAGTGGGGCAAGGTAGGAGGCCCAA...AGTGGAACGAGTCCTGTAGAGTGGCCATTCTGCCTGCTCCTCACTTACACAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| 3UTR-3UTR CCA 90 bp | TGTCTGCCAGAATTCTTCATTGCAGACCCTGGTGCACGCATGCAAATCAGGCTGGACAGAGAAGACCCCTaGCCTGAGACTCTGGGGTCA | + |
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Preference number: 2 (lower is better) Translates to: CLPEFFIADPGARMQIRLDREDP*PETLGS Trigger: TGACCCCAGAGTCTCAGGCCAGGGGTCTTCTCTGTC...CAGCCTGATTTGCATGCGTGCACCAGGGTCTGCAATGAAGAATTCTGGCAGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| 3UTR-3UTR GCA 90 bp | CTTTGTGTAAGTGAGGAGCAGGCAGAATGGCCACTCTACAGGACTCGTTCCACTAACGCAGCCCATCGATaGTACCAGAAGGACAGGGAC | + |
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Preference number: 2 (lower is better) Translates to: LCVSEEQAEWPLYRTRSTNAAHR*YQKDRD Trigger: GTCCCTGTCCTTCTGGTAGCATCGATGGGCTGCGTT...AGTGGAACGAGTCCTGTAGAGTGGCCATTCTGCCTGCTCCTCACTTACACAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| 3UTR CAA 90 bp | GCGCTTCTTACATCCAAAATGGTTCAGTCATGTGGTTGGGTGGTTTaGCGCAACCTCCCCGGCATGTCCCTTCTCGTTTCTGATTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: ALLTSKMVQSCGWVV*RNLPGMSLLVSDSS Trigger: GGAGGAATCAGAAACGAGAAGGGACATGCCGGGGAGGTTGCGCAAAACCACCCAACCACATGACTGAACCATTTTGGATGTAAGAAGCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| 3UTR-3UTR TCA 90 bp | ATACACCCGAGACCACAGAAACAGCCTCTCCCTTCTTTCAACTTGCATTCCAGAAGAAGACCCCTGGCCTaGGACTCTGGGGTCAGGTTT | + |
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Preference number: 2 (lower is better) Translates to: IHPRPQKQPLPSFNLHSRRRPLA*DSGVRF Trigger: AAACCTGACCCCAGAGTCTCAGGCCAGGGGTCTTCT...TCTGGAATGCAAGTTGAAAGAAGGGAGAGGCTGTTTCTGTGGTCTCGGGTGTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| 3UTR-3UTR CCA 90 bp | CTAATCTGCTACTTTAGACTCTCCTCGTATCCCAACCATAAACCCCACCCACACCCTGGCCTGAGACTCTaGGGTCAGGTTTCTCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: LICYFRLSSYPNHKPHPHPGLRL*GQVSPA Trigger: AGCAGGAGAAACCTGACCCCAGAGTCTCAGGCCAGG...GTGTGGGTGGGGTTTATGGTTGGGATACGAGGAGAGTCTAAAGTAGCAGATTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| 3UTR CAA 90 bp | AACAGCCTCTCCCTTCTTTCAACTTGCATTCCAGACTCATTCAACTaGGGCCTCCTACCTTGCCCCACTCAACGGGATCCAAACCCTGAA | + |
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Preference number: 2 (lower is better) Translates to: NSLSLLSTCIPDSFN*GLLPCPTQRDPNPE Trigger: TTCAGGGTTTGGATCCCGTTGAGTGGGGCAAGGTAGGAGGCCCAAGTTGAATGAGTCTGGAATGCAAGTTGAAAGAAGGGAGAGGCTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| 3UTR-3UTR GCA 90 bp | CACAGAAACAGCCTCTCCCTTCTTTCAACTTGCATTCCAGACTCATTCAACTTGTTCCTGTCTTCTGCCTaGCCTGTGCCTCGTGCCAGC | + |
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Preference number: 2 (lower is better) Translates to: HRNSLSLLSTCIPDSFNLFLSSA*PVPRAS Trigger: GCTGGCACGAGGCACAGGGCAGGCAGAAGACAGGAA...CAAGTTGAATGAGTCTGGAATGCAAGTTGAAAGAAGGGAGAGGCTGTTTCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| 3UTR-3UTR GCA 90 bp | CAGGGACAAGTGTGGTCCTCCCAGCCCTGTCCTCATGGAGACAAAGCTCCTCTGAAAAAGACCAGAATCTaGAACCCCTTCTGTAGGATA | + |
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Preference number: 2 (lower is better) Translates to: QGQVWSSQPCPHGDKAPLKKTRI*NPFCRI Trigger: TATCCTACAGAAGGGGTTGCAGATTCTGGTCTTTTT...CAGAGGAGCTTTGTCTCCATGAGGACAGGGCTGGGAGGACCACACTTGTCCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| 3UTR-3UTR CCA 90 bp | CTTTGTGTAAGTGAGGAGCAGGCAGAATGGCCACTCTACAGGACTCGTTCCACTGTTCAGTCATGTGGTTaGGTGGTTTTGCGCAACCTC | + |
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Preference number: 2 (lower is better) Translates to: LCVSEEQAEWPLYRTRSTVQSCG*VVLRNL Trigger: GAGGTTGCGCAAAACCACCCAACCACATGACTGAAC...AGTGGAACGAGTCCTGTAGAGTGGCCATTCTGCCTGCTCCTCACTTACACAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| 3UTR-3UTR CCA 90 bp | GGCAAACAGGAAGAGTGTCTTAGGTTCCAGGTAAGAGGGATGGAGGGGCAGATACTTCATTGCAGACCCTaGTGCACGCATGCAAATCAG | + |
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Preference number: 2 (lower is better) Translates to: GKQEECLRFQVRGMEGQILHCRP*CTHANQ Trigger: CTGATTTGCATGCGTGCACCAGGGTCTGCAATGAAG...TATCTGCCCCTCCATCCCTCTTACCTGGAACCTAAGACACTCTTCCTGTTTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| 3UTR-3UTR TCA 90 bp | AAAGGAATATCATCCACGTGTGCTGTAGACTCAGCACCAACCAGACTCAGTCCTCGAAGAATGCTGGGATaGGGATATCAGCAGAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: KGISSTCAVDSAPTRLSPRRMLG*GYQQRA Trigger: AGCCCTCTGCTGATATCCTCATCCCAGCATTCTTCG...AGGACTGAGTCTGGTTGGTGCTGAGTCTACAGCACACGTGGATGATATTCCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| 3UTR-3UTR TCA 90 bp | ATACACCCGAGACCACAGAAACAGCCTCTCCCTTCTTTCAACTTGCATTCCAGAGCATGCAAATCAGGCTaGCCTAGTCCACTGTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: IHPRPQKQPLPSFNLHSRACKSG*PSPLSV Trigger: CACAGACAGTGGACTAGGTCAGCCTGATTTGCATGC...TCTGGAATGCAAGTTGAAAGAAGGGAGAGGCTGTTTCTGTGGTCTCGGGTGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| 3UTR-3UTR GCA 90 bp | GGCAAACAGGAAGAGTGTCTTAGGTTCCAGGTAAGAGGGATGGAGGGGCAGATATTGGGTTCACTGCTTTaGAAACTACTCATGCGGTCC | + |
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Preference number: 2 (lower is better) Translates to: GKQEECLRFQVRGMEGQILGSLL*KLLMRS Trigger: GGACCGCATGAGTAGTTTGCAAAGCAGTGAACCCAA...TATCTGCCCCTCCATCCCTCTTACCTGGAACCTAAGACACTCTTCCTGTTTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| 3UTR-3UTR GCA 90 bp | CACAGAAACAGCCTCTCCCTTCTTTCAACTTGCATTCCAGACTCATTCAACTTGCATAAGAAGGGAGCCTaGGTCAAAGGGGAGCCTGGC | + |
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Preference number: 2 (lower is better) Translates to: HRNSLSLLSTCIPDSFNLHKKGA*VKGEPG Trigger: GCCAGGCTCCCCTTTGACGCAGGCTCCCTTCTTATG...CAAGTTGAATGAGTCTGGAATGCAAGTTGAAAGAAGGGAGAGGCTGTTTCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| 3UTR-3UTR TCA 90 bp | ATACACCCGAGACCACAGAAACAGCCTCTCCCTTCTTTCAACTTGCATTCCAGAGTCCCTTCTCGTTTCTaGTTCCTCCTTGGGTTCACT | + |
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Preference number: 2 (lower is better) Translates to: IHPRPQKQPLPSFNLHSRVPSRF*FLLGFT Trigger: AGTGAACCCAAGGAGGAATCAGAAACGAGAAGGGAC...TCTGGAATGCAAGTTGAAAGAAGGGAGAGGCTGTTTCTGTGGTCTCGGGTGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| 3UTR-3UTR TCA 90 bp | AAAGGAATATCATCCACGTGTGCTGTAGACTCAGCACCAACCAGACTCAGTCCTTCAACCCTCACACTGTaGAACAAGGCAGAACCTGTG | + |
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Preference number: 2 (lower is better) Translates to: KGISSTCAVDSAPTRLSPSTLTL*NKAEPV Trigger: CACAGGTTCTGCCTTGTTTCACAGTGTGAGGGTTGA...AGGACTGAGTCTGGTTGGTGCTGAGTCTACAGCACACGTGGATGATATTCCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| 3UTR-3UTR CCA 90 bp | CTAATCTGCTACTTTAGACTCTCCTCGTATCCCAACCATAAACCCCACCCACACCGTCAAAGGGGAGCCTaGCAATCTTCAAGACAGAGA | + |
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Preference number: 2 (lower is better) Translates to: LICYFRLSSYPNHKPHPHRQRGA*QSSRQR Trigger: TCTCTGTCTTGAAGATTGCCAGGCTCCCCTTTGACG...GTGTGGGTGGGGTTTATGGTTGGGATACGAGGAGAGTCTAAAGTAGCAGATTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| 3UTR-3UTR CCA 90 bp | CTAATCTGCTACTTTAGACTCTCCTCGTATCCCAACCATAAACCCCACCCACACGGAAGGATCAAAATTTaGCAGGCTGGGGGAACGACT | + |
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Preference number: 2 (lower is better) Translates to: LICYFRLSSYPNHKPHPHGRIKI*QAGGTT Trigger: AGTCGTTCCCCCAGCCTGCCAAATTTTGATCCTTCC...GTGTGGGTGGGGTTTATGGTTGGGATACGAGGAGAGTCTAAAGTAGCAGATTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| 3UTR CAA 90 bp | TCAATGTTTCAGTTAAGCTCAAAGGCCACTCATCAGGTACCCAAGTaGCCCAAGAACTCAAGGGAGTGTGTCTGTCAAGTTCTGTGGGGT | + |
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Preference number: 2 (lower is better) Translates to: SMFQLSSKATHQVPK*PKNSRECVCQVLWG Trigger: ACCCCACAGAACTTGACAGACACACTCCCTTGAGTTCTTGGGCAACTTGGGTACCTGATGAGTGGCCTTTGAGCTTAACTGAAACATTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| 3UTR-3UTR GCA 90 bp | CTAATCTGCTACTTTAGACTCTCCTCGTATCCCAACCATAAACCCCACCCACACCCTGTCTTAGCCTGTTaGTCCTATAATTCCCAAGGC | + |
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Preference number: 2 (lower is better) Translates to: LICYFRLSSYPNHKPHPHPVLAC*SYNSQG Trigger: GCCTTGGGAATTATAGGAGCAACAGGCTAAGACAGG...GTGTGGGTGGGGTTTATGGTTGGGATACGAGGAGAGTCTAAAGTAGCAGATTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| 3UTR-3UTR TCA 90 bp | AAAGGAATATCATCCACGTGTGCTGTAGACTCAGCACCAACCAGACTCAGTCCTGCTTTAGACCTCTGTTaGCAGGTTTTCCGAAGAATG | + |
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Preference number: 2 (lower is better) Translates to: KGISSTCAVDSAPTRLSPALDLC*QVFRRM Trigger: CATTCTTCGGAAAACCTGTCAACAGAGGTCTAAAGC...AGGACTGAGTCTGGTTGGTGCTGAGTCTACAGCACACGTGGATGATATTCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| 3UTR-3UTR TCA 90 bp | CTAATCTGCTACTTTAGACTCTCCTCGTATCCCAACCATAAACCCCACCCACACAATAGCAGCACACCGTaGAACATTACAGCTAGGTAC | + |
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Preference number: 2 (lower is better) Translates to: LICYFRLSSYPNHKPHPHNSSTP*NITARY Trigger: GTACCTAGCTGTAATGTTTCACGGTGTGCTGCTATT...GTGTGGGTGGGGTTTATGGTTGGGATACGAGGAGAGTCTAAAGTAGCAGATTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| 3UTR-3UTR TCA 90 bp | CTTTGTGTAAGTGAGGAGCAGGCAGAATGGCCACTCTACAGGACTCGTTCCACTAAAGAATACTCTCTTTaGAGAATGTGGTCAGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: LCVSEEQAEWPLYRTRSTKEYSL*RMWSEE Trigger: CTCCTCTGACCACATTCTTCAAAGAGAGTATTCTTT...AGTGGAACGAGTCCTGTAGAGTGGCCATTCTGCCTGCTCCTCACTTACACAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| 3UTR-3UTR CCA 90 bp | CTTTGTGTAAGTGAGGAGCAGGCAGAATGGCCACTCTACAGGACTCGTTCCACTTGCCAAGAAGGAAACTaGTCAATGTTCATGATGAAG | + |
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Preference number: 2 (lower is better) Translates to: LCVSEEQAEWPLYRTRSTCQEGN*SMFMMK Trigger: CTTCATCATGAACATTGACCAGTTTCCTTCTTGGCA...AGTGGAACGAGTCCTGTAGAGTGGCCATTCTGCCTGCTCCTCACTTACACAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| 3UTR-3UTR TCA 90 bp | CTAATCTGCTACTTTAGACTCTCCTCGTATCCCAACCATAAACCCCACCCACACAGGGTGTGTATGTATTaGTGGCTTCGTAAAACCAGA | + |
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Preference number: 2 (lower is better) Translates to: LICYFRLSSYPNHKPHPHRVCMY*WLRKTR Trigger: TCTGGTTTTACGAAGCCATCAATACATACACACCCT...GTGTGGGTGGGGTTTATGGTTGGGATACGAGGAGAGTCTAAAGTAGCAGATTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| 3UTR-3UTR CCA 90 bp | CTTTGTGTAAGTGAGGAGCAGGCAGAATGGCCACTCTACAGGACTCGTTCCACTAACAAAGTTAAACAGTaGACCAGACATGCTAATCAG | + |
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Preference number: 2 (lower is better) Translates to: LCVSEEQAEWPLYRTRSTNKVKQ*TRHANQ Trigger: CTGATTAGCATGTCTGGTCCACTGTTTAACTTTGTT...AGTGGAACGAGTCCTGTAGAGTGGCCATTCTGCCTGCTCCTCACTTACACAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| 3UTR-3UTR CCA 90 bp | CTAATCTGCTACTTTAGACTCTCCTCGTATCCCAACCATAAACCCCACCCACACAAACCAAACCAACTGTaGCTCCCACTTCTGTTTACT | + |
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Preference number: 2 (lower is better) Translates to: LICYFRLSSYPNHKPHPHKPNQL*LPLLFT Trigger: AGTAAACAGAAGTGGGAGCCACAGTTGGTTTGGTTT...GTGTGGGTGGGGTTTATGGTTGGGATACGAGGAGAGTCTAAAGTAGCAGATTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| 3UTR-3UTR TCA 90 bp | GGTCTTGGGAAACAACACAAACTAGAATGTGAGAAATCAGACCGTGTTCTCAGGCCTCATGAATTTCCATaGGGCACTGATAGCTTTGCT | + |
|
Preference number: 2 (lower is better) Translates to: GLGKQHKLECEKSDRVLRPHEFP*GTDSFA Trigger: AGCAAAGCTATCAGTGCCTCATGGAAATTCATGAGG...CCTGAGAACACGGTCTGATTTCTCACATTCTAGTTTGTGTTGTTTCCCAAGACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201066.2 ENSMUST00000201637.2 |
||
| 3UTR-3UTR CCA 90 bp | CACAGAAACAGCCTCTCCCTTCTTTCAACTTGCATTCCAGACTCATTCAACTTGTTTAGATTCCGTCTATaGTCTCCATCTGCCCCCATT | + |
|
Preference number: 2 (lower is better) Translates to: HRNSLSLLSTCIPDSFNLFRFRL*SPSAPI Trigger: AATGGGGGCAGATGGAGACCATAGACGGAATCTAAA...CAAGTTGAATGAGTCTGGAATGCAAGTTGAAAGAAGGGAGAGGCTGTTTCTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
||
| 3UTR-3UTR TCA 90 bp | CTGTTACACCTCCAGGGTCTTGGGAAACAACACAAACTAGAATGTGAGAAATCACCTCATGAATTTCCATaGGGCACTGATAGCTTTGCT | + |
|
Preference number: 2 (lower is better) Translates to: LLHLQGLGKQHKLECEKSPHEFP*GTDSFA Trigger: AGCAAAGCTATCAGTGCCTCATGGAAATTCATGAGG...TGATTTCTCACATTCTAGTTTGTGTTGTTTCCCAAGACCCTGGAGGTGTAACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201066.2 ENSMUST00000201637.2 |
||
| 3UTR-3UTR GCA 90 bp | CACAGAAACAGCCTCTCCCTTCTTTCAACTTGCATTCCAGACTCATTCAACTTGAAGTTGGGGTATAGATaGCAAGAAGGAAACTGGTCA | + |
|
Preference number: 2 (lower is better) Translates to: HRNSLSLLSTCIPDSFNLKLGYR*QEGNWS Trigger: TGACCAGTTTCCTTCTTGGCATCTATACCCCAACTT...CAAGTTGAATGAGTCTGGAATGCAAGTTGAAAGAAGGGAGAGGCTGTTTCTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
||
| 3UTR-3UTR GCA 90 bp | ATACACCCGAGACCACAGAAACAGCCTCTCCCTTCTTTCAACTTGCATTCCAGAGTATTCAACATGATTTaGATAAACCATCCCATATCC | + |
|
Preference number: 2 (lower is better) Translates to: IHPRPQKQPLPSFNLHSRVFNMI*INHPIS Trigger: GGATATGGGATGGTTTATGCAAATCATGTTGAATAC...TCTGGAATGCAAGTTGAAAGAAGGGAGAGGCTGTTTCTGTGGTCTCGGGTGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
||
| 3UTR-3UTR GCA 90 bp | TTTTTATTCACACTAATCTGCTACTTTAGACTCTCCTCGTATCCCAACCATAAACCACCACCTGGAGTCTaGACTGAGAGAAGCCTATGT | + |
|
Preference number: 2 (lower is better) Translates to: FLFTLICYFRLSSYPNHKPPPGV*TERSLC Trigger: ACATAGGCTTCTCTCAGTGCAGACTCCAGGTGGTGG...TTTATGGTTGGGATACGAGGAGAGTCTAAAGTAGCAGATTAGTGTGAATAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
||
| 3UTR-3UTR GCA 90 bp | TTTTTATTCACACTAATCTGCTACTTTAGACTCTCCTCGTATCCCAACCATAAACTGCCCCCATTTAGATaGGTTTTGGTCATGGCCCAT | + |
|
Preference number: 2 (lower is better) Translates to: FLFTLICYFRLSSYPNHKLPPFR*VLVMAH Trigger: ATGGGCCATGACCAAAACGCATCTAAATGGGGGCAG...TTTATGGTTGGGATACGAGGAGAGTCTAAAGTAGCAGATTAGTGTGAATAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
||
| 3UTR CAA 90 bp | AGGATAATGAACAACAACATGGAGATAATTCGATGGCCCGGTGACTaGCTGGGAACATACAAGATGATCAATATAAGAATAACAGCCAAT | + |
|
Preference number: 2 (lower is better) Translates to: RIMNNNMEIIRWPGD*LGTYKMINIRITAN Trigger: ATTGGCTGTTATTCTTATATTGATCATCTTGTATGTTCCCAGCAAGTCACCGGGCCATCGAATTATCTCCATGTTGTTGTTCATTATCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
||
| 3UTR-3UTR CCA 90 bp | TTTTTATTCACACTAATCTGCTACTTTAGACTCTCCTCGTATCCCAACCATAAATCACCTGTGTCCAACTaGCAAAAGACATATCCCTTA | + |
|
Preference number: 2 (lower is better) Translates to: FLFTLICYFRLSSYPNHKSPVSN*QKTYPL Trigger: TAAGGGATATGTCTTTTGCCAGTTGGACACAGGTGA...TTTATGGTTGGGATACGAGGAGAGTCTAAAGTAGCAGATTAGTGTGAATAAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
||
| 3UTR TCA 72 bp | ATGCCGCAGCTGTTGACCACCACCTGGAGTCTGCACTaGGAGAAGCCTATGTGTGCGGTGTGCACCTATGGA | + |
|
Preference number: 3 (lower is better) Translates to: MPQLLTTTWSLH*EKPMCAVCTYG Trigger: TCCATAGGTGCACACCGCACACATAGGCTTCTCTCAGTGCAGACTCCAGGTGGTGGTCAACAGCTGCGGCAT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
||
| 3UTR GCA 72 bp | TCTATCAAGGAGGATGTCCAGTTCCTGTCTTCTGCCTaGCCTGTGCCTCGTGCCAGCGGCCTTCCAAACAGA | + |
|
Preference number: 3 (lower is better) Translates to: SIKEDVQFLSSA*PVPRASGLPNR Trigger: TCTGTTTGGAAGGCCGCTGGCACGAGGCACAGGGCAGGCAGAAGACAGGAACTGGACATCCTCCTTGATAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
||
| 3UTR GCA 72 bp | GCTTTCTATCAAGGAGGATGTCCAGTTCCTGTCTTCTaGCTGCCCTGTGCCTCGTGCCAGCGGCCTTCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: AFYQGGCPVPVF*LPCASCQRPSK Trigger: TTTGGAAGGCCGCTGGCACGAGGCACAGGGCAGGCAGAAGACAGGAACTGGACATCCTCCTTGATAGAAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
||
| 3UTR GCA 72 bp | CCTCCCAGCCCTGTCCTCATGGAGACAAAGCTCCTCTaGCTTCTTTGTGAAAGCCACCCTGTCTTAGCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: PPSPVLMETKLL*LLCESHPVLAC Trigger: ACAGGCTAAGACAGGGTGGCTTTCACAAAGAAGGCAGAGGAGCTTTGTCTCCATGAGGACAGGGCTGGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
||
| 3UTR CCA 72 bp | GCACTGAGAGAAGCCTATGTGTGCGGTGTGCACCTATaGAGGGCTTGTCGGCTTAAGGGGACTTCACTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: ALREAYVCGVHL*RACRLKGTSLS Trigger: AGACAGTGAAGTCCCCTTAAGCCGACAAGCCCTCCATAGGTGCACACCGCACACATAGGCTTCTCTCAGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
||
| 3UTR TCA 72 bp | ACCAGAGCTGGGTACCAGAACATCAGACTCCAGAAATaGACAGTAACTGGACGAGGGTCAGGAAGGGGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: TRAGYQNIRLQK*TVTGRGSGRGG Trigger: CCCTCCCCTTCCTGACCCTCGTCCAGTTACTGTTCATTTCTGGAGTCTGATGTTCTGGTACCCAGCTCTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
||
| 3UTR TCA 72 bp | GCCTGGCAATCTTCAAGACAGAGAAGACCCCTGGCCTaGGACTCTGGGGTCAGGTTTCTCCTGCTTTCTATC | + |
|
Preference number: 3 (lower is better) Translates to: AWQSSRQRRPLA*DSGVRFLLLSI Trigger: GATAGAAAGCAGGAGAAACCTGACCCCAGAGTCTCAGGCCAGGGGTCTTCTCTGTCTTGAAGATTGCCAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
||
| 3UTR GCA 72 bp | GACCCCTGGCCTGAGACTCTGGGGTCAGGTTTCTCCTaGTTTCTATCAAGGAGGATGTCCAGTTCCTGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: DPWPETLGSGFS*FLSRRMSSSCL Trigger: AAGACAGGAACTGGACATCCTCCTTGATAGAAAGCAGGAGAAACCTGACCCCAGAGTCTCAGGCCAGGGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
||
| 3UTR GCA 72 bp | TGGGCTACAAGATGGAGGGAGGGTCTCCTAACTGTCTaGCAGAATTCTTCATTGCAGACCCTGGTGCACGCA | + |
|
Preference number: 3 (lower is better) Translates to: WATRWREGLLTV*QNSSLQTLVHA Trigger: TGCGTGCACCAGGGTCTGCAATGAAGAATTCTGGCAGACAGTTAGGAGACCCTCCCTCCATCTTGTAGCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
||
| 3UTR GCA 72 bp | CAAGTTCTGTGGGGTCCCTTAAGGACCAGAAGAGTGTaGTGTGCAGTGCGTGAGCTCTGGATAAACACTGGC | + |
|
Preference number: 3 (lower is better) Translates to: QVLWGPLRTRRV*CAVRELWINTG Trigger: GCCAGTGTTTATCCAGAGCTCACGCACTGCACAGCACACTCTTCTGGTCCTTAAGGGACCCCACAGAACTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
||
| 3UTR CCA 72 bp | AGAGGGCTTTCTCAGCCCTGGCAGGGACACCAGAGCTaGGTACCAGAACATCAGACTCCAGAAATGAACAGT | + |
|
Preference number: 3 (lower is better) Translates to: RGLSQPWQGHQS*VPEHQTPEMNS Trigger: ACTGTTCATTTCTGGAGTCTGATGTTCTGGTACCCAGCTCTGGTGTCCCTGCCAGGGCTGAGAAAGCCCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
||
| 3UTR CCA 72 bp | AAGCTAGCAACCTATATGACGGGCTCTGCTTTCCCGTaGTGTCCTGGGGACAGTTCAAACCAAAGCAGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: KLATYMTGSAFP*CPGDSSNQSSL Trigger: GAGGCTGCTTTGGTTTGAACTGTCCCCAGGACACCACGGGAAAGCAGAGCCCGTCATATAGGTTGCTAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
||
| 3UTR-3UTR CAA 90 bp | CTCATGCGGTCCTGGCACCCACGGTTCCTTGCAATTCTACTAAAGGGGGCATATCCCTTATGCAGGACTTaGAACAGGCACCACATGCGT | + |
|
Preference number: 3 (lower is better) Translates to: LMRSWHPRFLAILLKGAYPLCRT*NRHHMR Trigger: ACGCATGTGGTGCCTGTTCAAAGTCCTGCATAAGGG...ATATGCCCCCTTTAGTAGAATTGCAAGGAACCGTGGGTGCCAGGACCGCATGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
||
| 3UTR GCA 72 bp | CTTCTCGTTTCTGATTCCTCCTTGGGTTCACTGCTTTaGAAACTACTCATGCGGTCCTGGCACCCACGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: LLVSDSSLGSLL*KLLMRSWHPRF Trigger: GAACCGTGGGTGCCAGGACCGCATGAGTAGTTTGCAAAGCAGTGAACCCAAGGAGGAATCAGAAACGAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
||
| 3UTR GCA 72 bp | TGTCCCTTCTCGTTTCTGATTCCTCCTTGGGTTCACTaGTTTGCAAACTACTCATGCGGTCCTGGCACCCAC | + |
|
Preference number: 3 (lower is better) Translates to: CPFSFLIPPWVH*FANYSCGPGTH Trigger: GTGGGTGCCAGGACCGCATGAGTAGTTTGCAAAGCAGTGAACCCAAGGAGGAATCAGAAACGAGAAGGGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
||
| 3UTR GCA 72 bp | TGCATTCCAGACTCATTCAACTTGGGCCTCCTACCTTaGCCCACTCAACGGGATCCAAACCCTGAAGCCATT | + |
|
Preference number: 3 (lower is better) Translates to: CIPDSFNLGLLP*PTQRDPNPEAI Trigger: AATGGCTTCAGGGTTTGGATCCCGTTGAGTGGGGCAAGGTAGGAGGCCCAAGTTGAATGAGTCTGGAATGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
||
| 3UTR GCA 72 bp | ATTCCTCCTTGGGTTCACTGCTTTGCAAACTACTCATaGGGTCCTGGCACCCACGGTTCCTTGCAATTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: IPPWVHCFANYS*GPGTHGSLQFY Trigger: GTAGAATTGCAAGGAACCGTGGGTGCCAGGACCGCATGAGTAGTTTGCAAAGCAGTGAACCCAAGGAGGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
||
| 3UTR GCA 72 bp | CCCTTCGTCACTGTCTTCTATCATAAGAAGGGAGCCTaGGTCAAAGGGGAGCCTGGCAATCTTCAAGACAGA | + |
|
Preference number: 3 (lower is better) Translates to: PFVTVFYHKKGA*VKGEPGNLQDR Trigger: TCTGTCTTGAAGATTGCCAGGCTCCCCTTTGACGCAGGCTCCCTTCTTATGATAGAAGACAGTGACGAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
||
| 3UTR CCA 72 bp | CGTGGTGAGGCATCAAGGCGCTTCTTACATCCAAAATaGTTCAGTCATGTGGTTGGGTGGTTTTGCGCAACC | + |
|
Preference number: 3 (lower is better) Translates to: RGEASRRFLHPK*FSHVVGWFCAT Trigger: GGTTGCGCAAAACCACCCAACCACATGACTGAACCATTTTGGATGTAAGAAGCGCCTTGATGCCTCACCACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
||
| 3UTR-3UTR CAA 90 bp | ATACACCCGAGACCACAGAAACAGCCTCTCCCTTCTTTCAACTTGCATTCCAGATGCCAGAATTCTTCATaGCAGACCCTGGTGCACGCA | + |
|
Preference number: 3 (lower is better) Translates to: IHPRPQKQPLPSFNLHSRCQNSS*QTLVHA Trigger: TGCGTGCACCAGGGTCTGCAATGAAGAATTCTGGCA...TCTGGAATGCAAGTTGAAAGAAGGGAGAGGCTGTTTCTGTGGTCTCGGGTGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
||
| 3UTR TCA 72 bp | TCATTGCAGACCCTGGTGCACGCATGCAAATCAGGCTaGCCTAGTCCACTGTCTGTGTTTGATGAGTATCTG | + |
|
Preference number: 3 (lower is better) Translates to: SLQTLVHACKSG*PSPLSVFDEYL Trigger: CAGATACTCATCAAACACAGACAGTGGACTAGGTCAGCCTGATTTGCATGCGTGCACCAGGGTCTGCAATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
||
| 3UTR GCA 72 bp | CGAGACCACAGAAACAGCCTCTCCCTTCTTTCAACTTaGATTCCAGACTCATTCAACTTGGGCCTCCTACCT | + |
|
Preference number: 3 (lower is better) Translates to: RDHRNSLSLLST*IPDSFNLGLLP Trigger: AGGTAGGAGGCCCAAGTTGAATGAGTCTGGAATGCAAGTTGAAAGAAGGGAGAGGCTGTTTCTGTGGTCTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
||
| 3UTR CCA 72 bp | GAAGAGGAAAGTCCTGTGTCTGAATGGGCTACAAGATaGAGGGAGGGTCTCCTAACTGTCTGCCAGAATTCT | + |
|
Preference number: 3 (lower is better) Translates to: EEESPVSEWATR*REGLLTVCQNS Trigger: AGAATTCTGGCAGACAGTTAGGAGACCCTCCCTCCATCTTGTAGCCCATTCAGACACAGGACTTTCCTCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
||
| 3UTR CCA 72 bp | GCCTGTTGCTCCTATAATTCCCAAGGCACAGTCTGGTaGGTCCCCAAAGAGCTAGACTATAGGAAAGCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: ACCSYNSQGTVW*VPKELDYRKAL Trigger: AAGAGCTTTCCTATAGTCTAGCTCTTTGGGGACCCACCAGACTGTGCCTTGGGAATTATAGGAGCAACAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
||
| 3UTR CCA 72 bp | CCTAGTCCACTGTCTGTGTTTGATGAGTATCTGCCTTaGGTAGAGGAGCCCTTCGTCACTGTCTTCTATCAT | + |
|
Preference number: 3 (lower is better) Translates to: PSPLSVFDEYLP*VEEPFVTVFYH Trigger: ATGATAGAAGACAGTGACGAAGGGCTCCTCTACCCAAGGCAGATACTCATCAAACACAGACAGTGGACTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
||
| 3UTR CCA 72 bp | TCCCATCTAGAAGCAGCTCACCACTCACAGGCTGCCTaGTTCTTAGGAACCATTATGAATCTCCTTATGCTT | + |
|
Preference number: 3 (lower is better) Translates to: SHLEAAHHSQAA*FLGTIMNLLML Trigger: AAGCATAAGGAGATTCATAATGGTTCCTAAGAACCAGGCAGCCTGTGAGTGGTGAGCTGCTTCTAGATGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
||
| 3UTR TCA 72 bp | CATAAACCCCACCCACACCTGTTAGAGAGTACACCGTaGGAGAACAACATTGATTTGATATGGCATCGCACT | + |
|
Preference number: 3 (lower is better) Translates to: HKPHPHLLESTP*ENNIDLIWHRT Trigger: AGTGCGATGCCATATCAAATCAATGTTGTTCTCTCACGGTGTACTCTCTAACAGGTGTGGGTGGGGTTTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
||
| 3UTR GCA 72 bp | CATAGACGGGGATTCAATCCTTCTAAGCCATCACAATaGTTTAGACCTCTGTTGACAGGTTTTCCGAAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: HRRGFNPSKPSQ*FRPLLTGFPKN Trigger: ATTCTTCGGAAAACCTGTCAACAGAGGTCTAAAGCATTGTGATGGCTTAGAAGGATTGAATCCCCGTCTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
||
| 3UTR CCA 72 bp | AGAAGGATAATGAACAACAACATGGAGATAATTCGATaGCCCGGTGACTTGCTGGGAACATACAAGATGATC | + |
|
Preference number: 3 (lower is better) Translates to: RRIMNNNMEIIR*PGDLLGTYKMI Trigger: GATCATCTTGTATGTTCCCAGCAAGTCACCGGGCCATCGAATTATCTCCATGTTGTTGTTCATTATCCTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
||
| 3UTR TCA 72 bp | AATGAACAACAACATGGAGATAATTCGATGGCCCGGTaGCTTGCTGGGAACATACAAGATGATCAATATAAG | + |
|
Preference number: 3 (lower is better) Translates to: NEQQHGDNSMAR*LAGNIQDDQYK Trigger: CTTATATTGATCATCTTGTATGTTCCCAGCAAGTCACCGGGCCATCGAATTATCTCCATGTTGTTGTTCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
||
| 3UTR-3UTR CAA 90 bp | TTTTTATTCACACTAATCTGCTACTTTAGACTCTCCTCGTATCCCAACCATAAAGACTCTTTTGTGCTGTaGAAAATCCAGAAACATCAA | + |
|
Preference number: 3 (lower is better) Translates to: FLFTLICYFRLSSYPNHKDSFVL*KIQKHQ Trigger: TTGATGTTTCTGGATTTTCAACAGCACAAAAGAGTC...TTTATGGTTGGGATACGAGGAGAGTCTAAAGTAGCAGATTAGTGTGAATAAAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
||
| 3UTR CCA 72 bp | GAAATCAGACCGTGTTCTCAGGGTTCAGTGGAAATCTaGACCTTAATTATAACATCATTAACTAGAATATTC | + |
|
Preference number: 3 (lower is better) Translates to: EIRPCSQGSVEI*TLIITSLTRIF Trigger: GAATATTCTAGTTAATGATGTTATAATTAAGGTCCAGATTTCCACTGAACCCTGAGAACACGGTCTGATTTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201066.2 ENSMUST00000201637.2 |
||
| CDS-3UTR GCA 90 bp | TGTCTGCCAGAATTCTTCATTGCAGACCCTGGTGCACGCATGCAAATCAGGCTGGGTCTTCCAGCAGGTTaGGGTCCGGCACGGCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CLPEFFIADPGARMQIRLGLPAG*GPARPC Trigger: GCAGGGCCGTGCCGGACCGCAACCTGCTGGAAGACC...CAGCCTGATTTGCATGCGTGCACCAGGGTCTGCAATGAAGAATTCTGGCAGACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
||
| CDS-3UTR GCA 90 bp | AGGCAGAATGGCCACTCTACAGGACTCGTTCCACTAGGCTCCAAGGAAGGCAAAATGAAGGTCTGCGCATaGTTGCGGATCAGGGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: RQNGHSTGLVPLGSKEGKMKVCA*LRIRDS Trigger: GCTGTCCCTGATCCGCAAGCATGCGCAGACCTTCAT...TTTGCCTTCCTTGGAGCCTAGTGGAACGAGTCCTGTAGAGTGGCCATTCTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
||
| CDS-3UTR CCA 90 bp | CTCATGCGGTCCTGGCACCCACGGTTCCTTGCAATTCTACTAAAGGGGGCATATCTGCGCATGTACGGTTaGATGTCCTTCTGCACGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LMRSWHPRFLAILLKGAYLRMYG*MSFCTH Trigger: GTGCGTGCAGAAGGACATCCAACCGTACATGCGCAG...ATATGCCCCCTTTAGTAGAATTGCAAGGAACCGTGGGTGCCAGGACCGCATGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
||
| CDS-3UTR GCA 90 bp | CAACACAAACTAGAATGTGAGAAATCAGACCGTGTTCTCAGGGTTCAGTGGAAAGGTCTTCCAGCAGGTTaGGGTCCGGCACGGCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QHKLECEKSDRVLRVQWKGLPAG*GPARPC Trigger: GCAGGGCCGTGCCGGACCGCAACCTGCTGGAAGACC...TTTCCACTGAACCCTGAGAACACGGTCTGATTTCTCACATTCTAGTTTGTGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201066.2 ENSMUST00000201637.2 |
||
| CDS-3UTR GCA 90 bp | AAACAACACAAACTAGAATGTGAGAAATCAGACCGTGTTCTCAGGGTTCAGTGGGGTCTTCCAGCAGGTTaGGGTCCGGCACGGCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KQHKLECEKSDRVLRVQWGLPAG*GPARPC Trigger: GCAGGGCCGTGCCGGACCGCAACCTGCTGGAAGACC...CCACTGAACCCTGAGAACACGGTCTGATTTCTCACATTCTAGTTTGTGTTGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201066.2 ENSMUST00000201637.2 |
||
| CDS-3UTR GCA 90 bp | GGCAAACAGGAAGAGTGTCTTAGGTTCCAGGTAAGAGGGATGGAGGGGCAGATAGACAGCTTCTCCTTTTaGTGGGGCAGCTTGCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GKQEECLRFQVRGMEGQIDSFSF*WGSLRR Trigger: CCTTCGCAAGCTGCCCCAGCAAAAGGAGAAGCTGTC...TATCTGCCCCTCCATCCCTCTTACCTGGAACCTAAGACACTCTTCCTGTTTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
||
| CDS-3UTR GCA 90 bp | TGTCTGCCAGAATTCTTCATTGCAGACCCTGGTGCACGCATGCAAATCAGGCTGTCCCACGCTTCCAGTTaGAATCATCGACGGCGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: CLPEFFIADPGARMQIRLSHASS*NHRRRV Trigger: TACCCGCCGTCGATGATTGCAACTGGAAGCGTGGGA...CAGCCTGATTTGCATGCGTGCACCAGGGTCTGCAATGAAGAATTCTGGCAGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
||
| CDS-3UTR CCA 90 bp | CTTTGTGTAAGTGAGGAGCAGGCAGAATGGCCACTCTACAGGACTCGTTCCACTGGTAGCGCTCCTCGATaGTCAACAGGTTCTGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LCVSEEQAEWPLYRTRSTGSAPR*STGSAE Trigger: TTCTGCAGAACCTGTTGACCATCGAGGAGCGCTACC...AGTGGAACGAGTCCTGTAGAGTGGCCATTCTGCCTGCTCCTCACTTACACAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
||
| CDS-3UTR TCA 90 bp | CTAATCTGCTACTTTAGACTCTCCTCGTATCCCAACCATAAACCCCACCCACACACTGCACCCAGGAGCTaGAGATGGGTCTTAGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LICYFRLSSYPNHKPHPHTAPRS*RWVLGV Trigger: GACTCCTAAGACCCATCTTCAGCTCCTGGGTGCAGT...GTGTGGGTGGGGTTTATGGTTGGGATACGAGGAGAGTCTAAAGTAGCAGATTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
||
| CDS-3UTR GCA 90 bp | CTTTGTGTAAGTGAGGAGCAGGCAGAATGGCCACTCTACAGGACTCGTTCCACTAGCAGAGCTTCGATTTaGTCCTGGCAGGCTTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LCVSEEQAEWPLYRTRSTSRASI*SWQALR Trigger: TCTCAAAGCCTGCCAGGAGCAAATCGAAGCTCTGCT...AGTGGAACGAGTCCTGTAGAGTGGCCATTCTGCCTGCTCCTCACTTACACAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
||
| 3UTR CAA 72 bp | ACATCCAAAATGGTTCAGTCATGTGGTTGGGTGGTTTaGCGCAACCTCCCCGGCATGTCCCTTCTCGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TSKMVQSCGWVV*RNLPGMSLLVS Trigger: AGAAACGAGAAGGGACATGCCGGGGAGGTTGCGCAAAACCACCCAACCACATGACTGAACCATTTTGGATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| 3UTR CAA 72 bp | CCGAGACCACAGAAACAGCCTCTCCCTTCTTTCAACTaGCATTCCAGACTCATTCAACTTGGGCCTCCTACC | + |
|
Preference number: 4 (lower is better) Translates to: PRPQKQPLPSFN*HSRLIQLGPPT Trigger: GGTAGGAGGCCCAAGTTGAATGAGTCTGGAATGCAAGTTGAAAGAAGGGAGAGGCTGTTTCTGTGGTCTCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| CDS-3UTR TCA 90 bp | CTAATCTGCTACTTTAGACTCTCCTCGTATCCCAACCATAAACCCCACCCACACCCTTCTGCACGCACTTaGAATAGGAACACTGCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LICYFRLSSYPNHKPHPHPSART*NRNTAG Trigger: TCCCGCAGTGTTCCTATTTCAAGTGCGTGCAGAAGG...GTGTGGGTGGGGTTTATGGTTGGGATACGAGGAGAGTCTAAAGTAGCAGATTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| CDS-3UTR TCA 90 bp | AAAGGAATATCATCCACGTGTGCTGTAGACTCAGCACCAACCAGACTCAGTCCTGCTCCTGGCAGGCTTTaGGACAATCCACATCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KGISSTCAVDSAPTRLSPAPGRL*DNPHQC Trigger: ACACTGATGTGGATTGTCTCAAAGCCTGCCAGGAGC...AGGACTGAGTCTGGTTGGTGCTGAGTCTACAGCACACGTGGATGATATTCCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
||
| CDS-3UTR TCA 90 bp | GAGACTTTATTGGTCTTTAAGACATTACCTGTTACACCTCCAGGGTCTTGGGAAGTGGCGGCCTTAGTGTaGTGGGGAAGGGCAGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ETLLVFKTLPVTPPGSWEVAALV*WGRAES Trigger: TGACTCTGCCCTTCCCCATCACACTAAGGCCGCCAC...TTCCCAAGACCCTGGAGGTGTAACAGGTAATGTCTTAAAGACCAATAAAGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201066.2 ENSMUST00000201637.2 |
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| CDS-3UTR TCA 90 bp | AAACAACACAAACTAGAATGTGAGAAATCAGACCGTGTTCTCAGGGTTCAGTGGGTGGCGGCCTTAGTGTaGTGGGGAAGGGCAGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KQHKLECEKSDRVLRVQWVAALV*WGRAES Trigger: TGACTCTGCCCTTCCCCATCACACTAAGGCCGCCAC...CCACTGAACCCTGAGAACACGGTCTGATTTCTCACATTCTAGTTTGTGTTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201066.2 ENSMUST00000201637.2 |
||
| CDS-3UTR CCA 90 bp | CTTTGTGTAAGTGAGGAGCAGGCAGAATGGCCACTCTACAGGACTCGTTCCACTGGTCCAGGTAATTCATaGCCAGAGGAAAGACCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LCVSEEQAEWPLYRTRSTGPGNS*PEERPL Trigger: AAGAGGTCTTTCCTCTGGCCATGAATTACCTGGACC...AGTGGAACGAGTCCTGTAGAGTGGCCATTCTGCCTGCTCCTCACTTACACAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
||
| CDS-3UTR CCA 90 bp | ATACACCCGAGACCACAGAAACAGCCTCTCCCTTCTTTCAACTTGCATTCCAGAAGCTTCTCCTTTTGCTaGGGCAGCTTGCGAAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: IHPRPQKQPLPSFNLHSRSFSFC*GSLRRM Trigger: CATCCTTCGCAAGCTGCCCCAGCAAAAGGAGAAGCT...TCTGGAATGCAAGTTGAAAGAAGGGAGAGGCTGTTTCTGTGGTCTCGGGTGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
||
| CDS-3UTR GCA 90 bp | CACAGAAACAGCCTCTCCCTTCTTTCAACTTGCATTCCAGACTCATTCAACTTGAGAGCGATGAAGGTCTaGGCATGCTTGCGGATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HRNSLSLLSTCIPDSFNLRAMKV*ACLRIR Trigger: CCTGATCCGCAAGCATGCGCAGACCTTCATCGCTCT...CAAGTTGAATGAGTCTGGAATGCAAGTTGAAAGAAGGGAGAGGCTGTTTCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
||
| CDS-3UTR CCA 90 bp | GGTCTTGGGAAACAACACAAACTAGAATGTGAGAAATCAGACCGTGTTCTCAGGCCGCAGTCAGCGGGATaGTCTCTTTCAGCTTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GLGKQHKLECEKSDRVLRPQSAG*SLSAWK Trigger: CTTCCAAGCTGAAAGAGACCATCCCGCTGACTGCGG...CCTGAGAACACGGTCTGATTTCTCACATTCTAGTTTGTGTTGTTTCCCAAGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201066.2 ENSMUST00000201637.2 |
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| 3UTR CAA 72 bp | AGGGATGGAGGGGCAGATAGTAACCTGCCTCTCCCCTaGTGTGTCAGCTTCCTTCATTCAATGTTTCAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: RDGGADSNLPLP*CVSFLHSMFQL Trigger: TAACTGAAACATTGAATGAAGGAAGCTGACACACAAGGGGAGAGGCAGGTTACTATCTGCCCCTCCATCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
||
| CDS-3UTR TCA 90 bp | GAGACTTTATTGGTCTTTAAGACATTACCTGTTACACCTCCAGGGTCTTGGGAAACTGCACCCAGGAGCTaGAGATGGGTCTTAGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: ETLLVFKTLPVTPPGSWETAPRS*RWVLGV Trigger: GACTCCTAAGACCCATCTTCAGCTCCTGGGTGCAGT...TTCCCAAGACCCTGGAGGTGTAACAGGTAATGTCTTAAAGACCAATAAAGTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201066.2 ENSMUST00000201637.2 |
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| CDS-3UTR CCA 90 bp | TTACACCTCCAGGGTCTTGGGAAACAACACAAACTAGAATGTGAGAAATCAGACCTGCGCATGTACGGTTaGATGTCCTTCTGCACGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LHLQGLGKQHKLECEKSDLRMYG*MSFCTH Trigger: GTGCGTGCAGAAGGACATCCAACCGTACATGCGCAG...GTCTGATTTCTCACATTCTAGTTTGTGTTGTTTCCCAAGACCCTGGAGGTGTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201066.2 ENSMUST00000201637.2 |
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| CDS-3UTR CCA 90 bp | CAACACAAACTAGAATGTGAGAAATCAGACCGTGTTCTCAGGGTTCAGTGGAAACCGCAGTCAGCGGGATaGTCTCTTTCAGCTTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QHKLECEKSDRVLRVQWKPQSAG*SLSAWK Trigger: CTTCCAAGCTGAAAGAGACCATCCCGCTGACTGCGG...TTTCCACTGAACCCTGAGAACACGGTCTGATTTCTCACATTCTAGTTTGTGTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201066.2 ENSMUST00000201637.2 |
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| CDS-3UTR TCA 90 bp | TTACACCTCCAGGGTCTTGGGAAACAACACAAACTAGAATGTGAGAAATCAGACCCTTCTGCACGCACTTaGAATAGGAACACTGCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LHLQGLGKQHKLECEKSDPSART*NRNTAG Trigger: TCCCGCAGTGTTCCTATTTCAAGTGCGTGCAGAAGG...GTCTGATTTCTCACATTCTAGTTTGTGTTGTTTCCCAAGACCCTGGAGGTGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201066.2 ENSMUST00000201637.2 |
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| CDS-3UTR TCA 90 bp | CAACACAAACTAGAATGTGAGAAATCAGACCGTGTTCTCAGGGTTCAGTGGAAACCTTCTGCACGCACTTaGAATAGGAACACTGCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QHKLECEKSDRVLRVQWKPSART*NRNTAG Trigger: TCCCGCAGTGTTCCTATTTCAAGTGCGTGCAGAAGG...TTTCCACTGAACCCTGAGAACACGGTCTGATTTCTCACATTCTAGTTTGTGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201066.2 ENSMUST00000201637.2 |
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| CDS-3UTR CCA 90 bp | GAGACTTTATTGGTCTTTAAGACATTACCTGTTACACCTCCAGGGTCTTGGGAAGGTAGCGCTCCTCGATaGTCAACAGGTTCTGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ETLLVFKTLPVTPPGSWEGSAPR*STGSAE Trigger: TTCTGCAGAACCTGTTGACCATCGAGGAGCGCTACC...TTCCCAAGACCCTGGAGGTGTAACAGGTAATGTCTTAAAGACCAATAAAGTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201066.2 ENSMUST00000201637.2 |
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| CDS-3UTR CCA 90 bp | CAACACAAACTAGAATGTGAGAAATCAGACCGTGTTCTCAGGGTTCAGTGGAAAGGTAGCGCTCCTCGATaGTCAACAGGTTCTGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QHKLECEKSDRVLRVQWKGSAPR*STGSAE Trigger: TTCTGCAGAACCTGTTGACCATCGAGGAGCGCTACC...TTTCCACTGAACCCTGAGAACACGGTCTGATTTCTCACATTCTAGTTTGTGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201066.2 ENSMUST00000201637.2 |
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| CDS-3UTR TCA 90 bp | TTTTTATTCACACTAATCTGCTACTTTAGACTCTCCTCGTATCCCAACCATAAATGCTCAATGAAGTCGTaGGGGGTGACTGCGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FLFTLICYFRLSSYPNHKCSMKS*GVTAAR Trigger: CCTGGCCGCAGTCACCCCTCACGACTTCATTGAGCA...TTTATGGTTGGGATACGAGGAGAGTCTAAAGTAGCAGATTAGTGTGAATAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| CDS-3UTR CCA 90 bp | GAGACTTTATTGGTCTTTAAGACATTACCTGTTACACCTCCAGGGTCTTGGGAAGGTCCAGGTAATTCATaGCCAGAGGAAAGACCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ETLLVFKTLPVTPPGSWEGPGNS*PEERPL Trigger: AAGAGGTCTTTCCTCTGGCCATGAATTACCTGGACC...TTCCCAAGACCCTGGAGGTGTAACAGGTAATGTCTTAAAGACCAATAAAGTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201066.2 ENSMUST00000201637.2 |
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| CDS-3UTR CCA 90 bp | CAACACAAACTAGAATGTGAGAAATCAGACCGTGTTCTCAGGGTTCAGTGGAAAGGTCCAGGTAATTCATaGCCAGAGGAAAGACCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QHKLECEKSDRVLRVQWKGPGNS*PEERPL Trigger: AAGAGGTCTTTCCTCTGGCCATGAATTACCTGGACC...TTTCCACTGAACCCTGAGAACACGGTCTGATTTCTCACATTCTAGTTTGTGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201066.2 ENSMUST00000201637.2 |
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| CDS-3UTR CCA 90 bp | TTTTTATTCACACTAATCTGCTACTTTAGACTCTCCTCGTATCCCAACCATAAACCGCAGTCAGCGGGATaGTCTCTTTCAGCTTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FLFTLICYFRLSSYPNHKPQSAG*SLSAWK Trigger: CTTCCAAGCTGAAAGAGACCATCCCGCTGACTGCGG...TTTATGGTTGGGATACGAGGAGAGTCTAAAGTAGCAGATTAGTGTGAATAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| 3UTR CAA 72 bp | AATCCTTCTAAGCCATCACAATGCTTTAGACCTCTGTaGACAGGTTTTCCGAAGAATGCTGGGATGAGGATA | + |
|
Preference number: 4 (lower is better) Translates to: NPSKPSQCFRPL*TGFPKNAGMRI Trigger: TATCCTCATCCCAGCATTCTTCGGAAAACCTGTCAACAGAGGTCTAAAGCATTGTGATGGCTTAGAAGGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| CDS GCA 90 bp | CCTCGATGGTCAACAGGTTCTGCAGAACGCGGTCTTCCAGCAGGTTaGGGTCCGGCACGGCCCTGCGGACCGGGTCCACCTCGCAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: PRWSTGSAERGLPAG*GPARPCGPGPPRST Trigger: TGTGCTGCGAGGTGGACCCGGTCCGCAGGGCCGTGCCGGACCGCAACCTGCTGGAAGACCGCGTTCTGCAGAACCTGTTGACCATCGAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000188.12 ENSMUST00000201066.2 ENSMUST00000201637.2 ENSMUST00000201902.4 |
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| CDS-3UTR CAA 90 bp | ATACACCCGAGACCACAGAAACAGCCTCTCCCTTCTTTCAACTTGCATTCCAGACGGTCTTCCAGCAGGTaGCGGTCCGGCACGGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: IHPRPQKQPLPSFNLHSRRSSSR*RSGTAL Trigger: CAGGGCCGTGCCGGACCGCAACCTGCTGGAAGACCG...TCTGGAATGCAAGTTGAAAGAAGGGAGAGGCTGTTTCTGTGGTCTCGGGTGTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| CDS-3UTR CAA 90 bp | CAGGGACAAGTGTGGTCCTCCCAGCCCTGTCCTCATGGAGACAAAGCTCCTCTGGGGTACATGGCAAACTaGAAGTCGGTAGCGCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: QGQVWSSQPCPHGDKAPLGYMAN*KSVAHR Trigger: TCTGTGCGCTACCGACTTCAAGTTTGCCATGTACCC...CAGAGGAGCTTTGTCTCCATGAGGACAGGGCTGGGAGGACCACACTTGTCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| CDS-3UTR CAA 90 bp | GGCAAACAGGAAGAGTGTCTTAGGTTCCAGGTAAGAGGGATGGAGGGGCAGATACTCCCACGCTTCCAGTaGCAATCATCGACGGCGGGT | + |
|
Preference number: 5 (lower is better) Translates to: GKQEECLRFQVRGMEGQILPRFQ*QSSTAG Trigger: ACCCGCCGTCGATGATTGCAACTGGAAGCGTGGGAG...TATCTGCCCCTCCATCCCTCTTACCTGGAACCTAAGACACTCTTCCTGTTTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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| CDS-3UTR CAA 90 bp | TTACACCTCCAGGGTCTTGGGAAACAACACAAACTAGAATGTGAGAAATCAGACCGGTCTTCCAGCAGGTaGCGGTCCGGCACGGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LHLQGLGKQHKLECEKSDRSSSR*RSGTAL Trigger: CAGGGCCGTGCCGGACCGCAACCTGCTGGAAGACCG...GTCTGATTTCTCACATTCTAGTTTGTGTTGTTTCCCAAGACCCTGGAGGTGTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201066.2 ENSMUST00000201637.2 |
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| CDS-3UTR CAA 90 bp | CTTTGTGTAAGTGAGGAGCAGGCAGAATGGCCACTCTACAGGACTCGTTCCACTTTTTGCTGGGGCAGCTaGCGAAGGATGTGCTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: LCVSEEQAEWPLYRTRSTFCWGS*RRMCSM Trigger: CATTGAGCACATCCTTCGCAAGCTGCCCCAGCAAAA...AGTGGAACGAGTCCTGTAGAGTGGCCATTCTGCCTGCTCCTCACTTACACAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
||
| CDS CAA 72 bp | GTCAACAGGTTCTGCAGAACGCGGTCTTCCAGCAGGTaGCGGTCCGGCACGGCCCTGCGGACCGGGTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: VNRFCRTRSSSR*RSGTALRTGST Trigger: GGTGGACCCGGTCCGCAGGGCCGTGCCGGACCGCAACCTGCTGGAAGACCGCGTTCTGCAGAACCTGTTGAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000188.12 ENSMUST00000201066.2 ENSMUST00000201637.2 ENSMUST00000201902.4 |
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| CDS CAA 90 bp | TCCTCGATGGTCAACAGGTTCTGCAGAACGCGGTCTTCCAGCAGGTaGCGGTCCGGCACGGCCCTGCGGACCGGGTCCACCTCGCAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: SSMVNRFCRTRSSSR*RSGTALRTGSTSQH Trigger: GTGCTGCGAGGTGGACCCGGTCCGCAGGGCCGTGCCGGACCGCAACCTGCTGGAAGACCGCGTTCTGCAGAACCTGTTGACCATCGAGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000188.12 ENSMUST00000201066.2 ENSMUST00000201637.2 ENSMUST00000201902.4 |
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| CDS GCA 72 bp | TCAACAGGTTCTGCAGAACGCGGTCTTCCAGCAGGTTaGGGTCCGGCACGGCCCTGCGGACCGGGTCCACCT | + |
|
Preference number: 6 (lower is better) Translates to: STGSAERGLPAG*GPARPCGPGPP Trigger: AGGTGGACCCGGTCCGCAGGGCCGTGCCGGACCGCAACCTGCTGGAAGACCGCGTTCTGCAGAACCTGTTGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000188.12 ENSMUST00000201066.2 ENSMUST00000201637.2 ENSMUST00000201902.4 |
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| CDS CAA 72 bp | CAGGTCAACATCCCGCACGTCTGTAGGGGTGGTGGCTaGGTCCGGATCTTCCACAGACTTGGATCCGGCGTT | + |
|
Preference number: 6 (lower is better) Translates to: QVNIPHVCRGGG*VRIFHRLGSGV Trigger: AACGCCGGATCCAAGTCTGTGGAAGATCCGGACCAAGCCACCACCCCTACAGACGTGCGGGATGTTGACCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
||
| CDS CCA 72 bp | AGGTCAACATCCCGCACGTCTGTAGGGGTGGTGGCTTaGTCCGGATCTTCCACAGACTTGGATCCGGCGTTA | + |
|
Preference number: 6 (lower is better) Translates to: RSTSRTSVGVVA*SGSSTDLDPAL Trigger: TAACGCCGGATCCAAGTCTGTGGAAGATCCGGACCAAGCCACCACCCCTACAGACGTGCGGGATGTTGACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000188.12 |
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