Pregenerated sensors for CCND1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070348Ensembl transcript IDs: ENSMUST00000093962.5
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTCAAGGGTCCTGCCTGGCTGGGATGCCTCAGCTGAGCTGGTGGTaGCCGTTTTGGTTTGGCAGCTTGCTAGGGAACTTGGGGGCCTAC | + |
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Preference number: 1 (lower is better) Translates to: PQGSCLAGMPQLSWW*PFWFGSLLGNLGAY Trigger: GTAGGCCCCCAAGTTCCCTAGCAAGCTGCCAAACCAAAACGGGCACCACCAGCTCAGCTGAGGCATCCCAGCCAGGCAGGACCCTTGAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| 3UTR CCA 90 bp | ACCCCATCACCATGGATACAGCGGCCCTCAAGGGTCCTGCCTGGCTaGGATGCCTCAGCTGAGCTGGTGGTGCCCGTTTTGGTTTGGCAG | + |
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Preference number: 1 (lower is better) Translates to: TPSPWIQRPSRVLPG*DASAELVVPVLVWQ Trigger: CTGCCAAACCAAAACGGGCACCACCAGCTCAGCTGAGGCATCCCAGCCAGGCAGGACCCTTGAGGGCCGCTGTATCCATGGTGATGGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| 3UTR TCA 90 bp | GGTTCTGAACGTCTGGGATCCTGGGAGTCATCGGTAGCAGCGCCATaGGAGGAGCCGTGGCCTGTCCCATGTGGTCCCACCTTCACCTCT | + |
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Preference number: 1 (lower is better) Translates to: GSERLGSWESSVAAP*EEPWPVPCGPTFTS Trigger: AGAGGTGAAGGTGGGACCACATGGGACAGGCCACGGCTCCTCTCATGGCGCTGCTACCGATGACTCCCAGGATCCCAGACGTTCAGAACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| 3UTR CCA 90 bp | TGGGAAGCGCCATGGTGTGTCAACCAGAAATACAAAAAGCCAACCTaGCCACCAGCCAGAGCCCCTCAAAGCCTTTCATGTCACAGGGCA | + |
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Preference number: 1 (lower is better) Translates to: WEAPWCVNQKYKKPT*PPARAPQSLSCHRA Trigger: TGCCCTGTGACATGAAAGGCTTTGAGGGGCTCTGGCTGGTGGCCAGGTTGGCTTTTTGTATTTCTGGTTGACACACCATGGCGCTTCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| 3UTR GCA 90 bp | CCTCTTCCCTCACATCCCCTCTTAAGCCTCCCGCTCTCCACCTTCTaGCAAAAAGTCCTAATAGAAAGGCACAGAGCCAGAGGTGTGCAA | + |
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Preference number: 1 (lower is better) Translates to: PLPSHPLLSLPLSTF*QKVLIERHRARGVQ Trigger: TTGCACACCTCTGGCTCTGTGCCTTTCTATTAGGACTTTTTGGCAGAAGGTGGAGAGCGGGAGGCTTAAGAGGGGATGTGAGGGAAGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| 3UTR CCA 90 bp | CTTGTCCAGGTAATGCCATCATGGTTCCTACTTCCAAACACCAGCTaGCACCAAAGGATCCCTTCAACTTTGCAGGACAGATCCCGGTGG | + |
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Preference number: 1 (lower is better) Translates to: LVQVMPSWFLLPNTS*HQRIPSTLQDRSRW Trigger: CCACCGGGATCTGTCCTGCAAAGTTGAAGGGATCCTTTGGTGCCAGCTGGTGTTTGGAAGTAGGAACCATGATGGCATTACCTGGACAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| 3UTR TCA 90 bp | CAAGCACCTCATACTACCAGCCCTACAACCTGTTGTACAGCCATCTaGATGCGTGTGTGGACATCCCCATCCATTCCATTAGAACCCCTC | + |
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Preference number: 1 (lower is better) Translates to: QAPHTTSPTTCCTAI*MRVWTSPSIPLEPL Trigger: GAGGGGTTCTAATGGAATGGATGGGGATGTCCACACACGCATTCAGATGGCTGTACAACAGGTTGTAGGGCTGGTAGTATGAGGTGCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| 3UTR TCA 90 bp | CAGCGAAAACAACGTGAAAGATACAAAGCAATGAGAATCTGGTTCTaGACGTCTGGGATCCTGGGAGTCATCGGTAGCAGCGCCATGAGA | + |
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Preference number: 1 (lower is better) Translates to: QRKQRERYKAMRIWF*TSGILGVIGSSAMR Trigger: TCTCATGGCGCTGCTACCGATGACTCCCAGGATCCCAGACGTTCAGAACCAGATTCTCATTGCTTTGTATCTTTCACGTTGTTTTCGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| 3UTR CCA 90 bp | GACTTAAGAGTTGTCCCCAATCTCCTTGTCCAGGTAATGCCATCATaGTTCCTACTTCCAAACACCAGCTGGCACCAAAGGATCCCTTCA | + |
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Preference number: 1 (lower is better) Translates to: DLRVVPNLLVQVMPS*FLLPNTSWHQRIPS Trigger: TGAAGGGATCCTTTGGTGCCAGCTGGTGTTTGGAAGTAGGAACCATGATGGCATTACCTGGACAAGGAGATTGGGGACAACTCTTAAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| 3UTR-3UTR CCA 90 bp | TGGGATGCCTCAGCTGAGCTGGTGGTGCCCGTTTTGGTTTGGCAGCTTGCTAGGGGTGCCACTACTTGGTaGCTCCCGCCTGCCCGGTGG | + |
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Preference number: 2 (lower is better) Translates to: WDASAELVVPVLVWQLARGATTW*LPPARW Trigger: CCACCGGGCAGGCGGGAGCCACCAAGTAGTGGCACC...CCTAGCAAGCTGCCAAACCAAAACGGGCACCACCAGCTCAGCTGAGGCATCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| 3UTR-3UTR GCA 90 bp | CCCAGATCAAATGAAGGGCCCAGCATGACAGGACGATCGCCATCAGGGTCCCAGGACCGCCCACCTGCCTaGCAGGCTCGTGCATGGCTA | + |
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Preference number: 2 (lower is better) Translates to: PRSNEGPSMTGRSPSGSQDRPPA*QARAWL Trigger: TAGCCATGCACGAGCCTGGCAGGCAGGTGGGCGGTC...CTGGGACCCTGATGGCGATCGTCCTGTCATGCTGGGCCCTTCATTTGATCTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| 3UTR-3UTR CCA 90 bp | ACAGGACGATCGCCATCAGGGTCCCAGGATCCCTGGAGGCAGACCGCCCACCTGTTTTGTAGCACCCCCTaGCTCCCTACTCTCAGGGTG | + |
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Preference number: 2 (lower is better) Translates to: TGRSPSGSQDPWRQTAHLFCSTP*LPTLRV Trigger: CACCCTGAGAGTAGGGAGCCAGGGGGTGCTACAAAA...CAGGTGGGCGGTCTGCCTCCAGGGATCCTGGGACCCTGATGGCGATCGTCCTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| 3UTR CAA 90 bp | GGGATGCCTCAGCTGAGCTGGTGGTGCCCGTTTTGGTTTGGCAGCTaGCTAGGGAACTTGGGGGCCTACAGCACTGCAGCTGGCTTCGCA | + |
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Preference number: 2 (lower is better) Translates to: GMPQLSWWCPFWFGS*LGNLGAYSTAAGFA Trigger: TGCGAAGCCAGCTGCAGTGCTGTAGGCCCCCAAGTTCCCTAGCAAGCTGCCAAACCAAAACGGGCACCACCAGCTCAGCTGAGGCATCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| 3UTR CAA 90 bp | CTGAGCTGGTGGTGCCCGTTTTGGTTTGGCAGCTTGCTAGGGAACTaGGGGGCCTACAGCACTGCAGCTGGCTTCGCAAAGGCAGAGTCT | + |
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Preference number: 2 (lower is better) Translates to: LSWWCPFWFGSLLGN*GAYSTAAGFAKAES Trigger: AGACTCTGCCTTTGCGAAGCCAGCTGCAGTGCTGTAGGCCCCCAAGTTCCCTAGCAAGCTGCCAAACCAAAACGGGCACCACCAGCTCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| 3UTR-3UTR GCA 90 bp | CCCAGATCAAATGAAGGGCCCAGCATGACAGGACGATCGCCATCAGGGTCCCAGCCGCTGTGTGGCTGGTaGTGTGAACCTGCAGGTTGT | + |
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Preference number: 2 (lower is better) Translates to: PRSNEGPSMTGRSPSGSQPLCGW*CEPAGC Trigger: ACAACCTGCAGGTTCACAGCACCAGCCACACAGCGG...CTGGGACCCTGATGGCGATCGTCCTGTCATGCTGGGCCCTTCATTTGATCTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| 3UTR-3UTR CCA 90 bp | CCCAGATCAAATGAAGGGCCCAGCATGACAGGACGATCGCCATCAGGGTCCCAGCTACCGCTGTGTGGCTaGTGCTGTGAACCTGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: PRSNEGPSMTGRSPSGSQLPLCG*CCEPAG Trigger: ACCTGCAGGTTCACAGCACCAGCCACACAGCGGTAG...CTGGGACCCTGATGGCGATCGTCCTGTCATGCTGGGCCCTTCATTTGATCTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| 3UTR CAA 90 bp | TGTCACAGGGCAGATTCCGTGGACCCACCACCAGTCTTTGGCCTTTaGGCCAAAACCTCACCCCATCACCATGGATACAGCGGCCCTCAA | + |
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Preference number: 2 (lower is better) Translates to: CHRADSVDPPPVFGL*AKTSPHHHGYSGPQ Trigger: TTGAGGGCCGCTGTATCCATGGTGATGGGGTGAGGTTTTGGCCAAAAGGCCAAAGACTGGTGGTGGGTCCACGGAATCTGCCCTGTGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| 3UTR-3UTR TCA 90 bp | ACAGGACGATCGCCATCAGGGTCCCAGGATCCCTGGAGGCAGACCGCCCACCTGTGGCTAGATGATACATaGGGTATTGTGAACAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: TGRSPSGSQDPWRQTAHLWLDDT*GIVNRN Trigger: GTTCCTGTTCACAATACCTCATGTATCATCTAGCCA...CAGGTGGGCGGTCTGCCTCCAGGGATCCTGGGACCCTGATGGCGATCGTCCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| 3UTR-3UTR GCA 90 bp | GGTAGCAGCGCCATGAGAGGAGCCGTGGCCTGTCCCATGTGGTCCCACCTTCACGCAGCGGCAAGAATGTaGCAGAATCAAACTCTTTTG | + |
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Preference number: 2 (lower is better) Translates to: GSSAMRGAVACPMWSHLHAAARM*QNQTLL Trigger: CAAAAGAGTTTGATTCTGGCACATTCTTGCCGCTGC...GTGAAGGTGGGACCACATGGGACAGGCCACGGCTCCTCTCATGGCGCTGCTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| 3UTR CAA 90 bp | TTTGCAGGACAGATCCCGGTGGTGCGAGAACAGAGTTCTCTCTTCTaGACCCAACAAAACTTCCCAAGCACCTCATACTACCAGCCCTAC | + |
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Preference number: 2 (lower is better) Translates to: FAGQIPVVREQSSLF*TQQNFPSTSYYQPY Trigger: GTAGGGCTGGTAGTATGAGGTGCTTGGGAAGTTTTGTTGGGTCAAGAAGAGAGAACTCTGTTCTCGCACCACCGGGATCTGTCCTGCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| 3UTR-3UTR GCA 90 bp | TTAACTTGGGGGCAGCGGCAAGAATGTGCCAGAATCAAACTCTTTTGGAGTCCCGACAGATCCCGGTGGTaGGAGAACAGAGTTCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: LTWGQRQECARIKLFWSPDRSRW*ENRVLS Trigger: AGAGAGAACTCTGTTCTCGCACCACCGGGATCTGTC...GGGACTCCAAAAGAGTTTGATTCTGGCACATTCTTGCCGCTGCCCCCAAGTTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| 3UTR-3UTR GCA 90 bp | CATGTCTGTGCTGGGAAGCGCCATGGTGTGTCAACCAGAAATACAAAAAGCCAAACACACCAGCAACACTaGCTCCAGCTAGCTGACCAA | + |
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Preference number: 2 (lower is better) Translates to: HVCAGKRHGVSTRNTKSQTHQQH*LQLADQ Trigger: TTGGTCAGCTAGCTGGAGGCAGTGTTGCTGGTGTGT...TTGGCTTTTTGTATTTCTGGTTGACACACCATGGCGCTTCCCAGCACAGACATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| 3UTR-3UTR CCA 90 bp | TTAACTTGGGGGCAGCGGCAAGAATGTGCCAGAATCAAACTCTTTTGGAGTCCCTCCAATGGGGCCAATTaGGTTGGGAAAGTCAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: LTWGQRQECARIKLFWSPSNGAN*VGKVKQ Trigger: CTGCTTGACTTTCCCAACCCAATTGGCCCCATTGGA...GGGACTCCAAAAGAGTTTGATTCTGGCACATTCTTGCCGCTGCCCCCAAGTTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| 3UTR-3UTR CCA 90 bp | CACATGTCTGTGCTGGGAAGCGCCATGGTGTGTCAACCAGAAATACAAAAAGCCGAGTCACACTGGTCATaGGCAGCCTTTCCCATAAAT | + |
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Preference number: 2 (lower is better) Translates to: HMSVLGSAMVCQPEIQKAESHWS*AAFPIN Trigger: ATTTATGGGAAAGGCTGCCCATGACCAGTGTGACTC...GGCTTTTTGTATTTCTGGTTGACACACCATGGCGCTTCCCAGCACAGACATGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| 3UTR-3UTR CCA 90 bp | CCAAAAAGTCCTAATAGAAAGGCACAGAGCCAGAGGTGTGCAAATTACCTACTGTTTCCTCAGTTTGGATaGCTCTCCAATGGGGCCAAT | + |
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Preference number: 2 (lower is better) Translates to: PKSPNRKAQSQRCANYLLFPQFG*LSNGAN Trigger: ATTGGCCCCATTGGAGAGCCATCCAAACTGAGGAAA...CAGTAGGTAATTTGCACACCTCTGGCTCTGTGCCTTTCTATTAGGACTTTTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| 3UTR-3UTR TCA 90 bp | CACATGTCTGTGCTGGGAAGCGCCATGGTGTGTCAACCAGAAATACAAAAAGCCGAGGAAATTAAAACTTaGACATGGCAGTCTGACATT | + |
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Preference number: 2 (lower is better) Translates to: HMSVLGSAMVCQPEIQKAEEIKT*TWQSDI Trigger: AATGTCAGACTGCCATGTTCAAGTTTTAATTTCCTC...GGCTTTTTGTATTTCTGGTTGACACACCATGGCGCTTCCCAGCACAGACATGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| 3UTR-3UTR GCA 90 bp | CCCCAATCTCCTTGTCCAGGTAATGCCATCATGGTTCCTACTTCCAAACACCAGCTAGCTGACCAAAAGTaGTTTGAAATGGAATGGTTT | + |
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Preference number: 2 (lower is better) Translates to: PQSPCPGNAIMVPTSKHQLADQK*FEMEWF Trigger: AAACCATTCCATTTCAAAGCACTTTTGGTCAGCTAG...CTGGTGTTTGGAAGTAGGAACCATGATGGCATTACCTGGACAAGGAGATTGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| 3UTR-3UTR GCA 90 bp | CCAAAAAGTCCTAATAGAAAGGCACAGAGCCAGAGGTGTGCAAATTACCTACTGCAAGGGAGATCACATTaGTTTGAGTCACACTGGTCA | + |
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Preference number: 2 (lower is better) Translates to: PKSPNRKAQSQRCANYLLQGRSH*FESHWS Trigger: TGACCAGTGTGACTCAAAGCAATGTGATCTCCCTTG...CAGTAGGTAATTTGCACACCTCTGGCTCTGTGCCTTTCTATTAGGACTTTTTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| 3UTR GCA 72 bp | CAGGAGCACCCGGGCTGGCTCCTTCCTCTTTGCGGGTaGCACTACTTGGTGGCTCCCGCCTGCCCGGTGGCC | + |
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Preference number: 3 (lower is better) Translates to: QEHPGWLLPLCG*HYLVAPACPVA Trigger: GGCCACCGGGCAGGCGGGAGCCACCAAGTAGTGGCACCCGCAAAGAGGAAGGAGCCAGCCCGGGTGCTCCTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| 3UTR GCA 72 bp | CGTCGTCAGGAGCACCCGGGCTGGCTCCTTCCTCTTTaGGGGTGCCACTACTTGGTGGCTCCCGCCTGCCCG | + |
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Preference number: 3 (lower is better) Translates to: RRQEHPGWLLPL*GCHYLVAPACP Trigger: CGGGCAGGCGGGAGCCACCAAGTAGTGGCACCCGCAAAGAGGAAGGAGCCAGCCCGGGTGCTCCTGACGACG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| 3UTR TCA 72 bp | CGTCTGGGATCCTGGGAGTCATCGGTAGCAGCGCCATaGGAGGAGCCGTGGCCTGTCCCATGTGGTCCCACC | + |
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Preference number: 3 (lower is better) Translates to: RLGSWESSVAAP*EEPWPVPCGPT Trigger: GGTGGGACCACATGGGACAGGCCACGGCTCCTCTCATGGCGCTGCTACCGATGACTCCCAGGATCCCAGACG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| 3UTR GCA 72 bp | CCCCATCACCATGGATACAGCGGCCCTCAAGGGTCCTaGCTGGCTGGGATGCCTCAGCTGAGCTGGTGGTGC | + |
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Preference number: 3 (lower is better) Translates to: PHHHGYSGPQGS*LAGMPQLSWWC Trigger: GCACCACCAGCTCAGCTGAGGCATCCCAGCCAGGCAGGACCCTTGAGGGCCGCTGTATCCATGGTGATGGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| 3UTR CCA 72 bp | TGTCCCCAAGGGGGACGTCGTCAGGAGCACCCGGGCTaGCTCCTTCCTCTTTGCGGGTGCCACTACTTGGTG | + |
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Preference number: 3 (lower is better) Translates to: CPQGGRRQEHPG*LLPLCGCHYLV Trigger: CACCAAGTAGTGGCACCCGCAAAGAGGAAGGAGCCAGCCCGGGTGCTCCTGACGACGTCCCCCTTGGGGACA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| 3UTR TCA 72 bp | GCCCTCAAGGGTCCTGCCTGGCTGGGATGCCTCAGCTaGGCTGGTGGTGCCCGTTTTGGTTTGGCAGCTTGC | + |
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Preference number: 3 (lower is better) Translates to: ALKGPAWLGCLS*AGGARFGLAAC Trigger: GCAAGCTGCCAAACCAAAACGGGCACCACCAGCTCAGCTGAGGCATCCCAGCCAGGCAGGACCCTTGAGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| 3UTR CCA 72 bp | CCATGGATACAGCGGCCCTCAAGGGTCCTGCCTGGCTaGGATGCCTCAGCTGAGCTGGTGGTGCCCGTTTTG | + |
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Preference number: 3 (lower is better) Translates to: PWIQRPSRVLPG*DASAELVVPVL Trigger: CAAAACGGGCACCACCAGCTCAGCTGAGGCATCCCAGCCAGGCAGGACCCTTGAGGGCCGCTGTATCCATGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| 3UTR CCA 72 bp | CAAGGGTCCTGCCTGGCTGGGATGCCTCAGCTGAGCTaGTGGTGCCCGTTTTGGTTTGGCAGCTTGCTAGGG | + |
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Preference number: 3 (lower is better) Translates to: QGSCLAGMPQLS*WCPFWFGSLLG Trigger: CCCTAGCAAGCTGCCAAACCAAAACGGGCACCACCAGCTCAGCTGAGGCATCCCAGCCAGGCAGGACCCTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| 3UTR CCA 72 bp | GCTGGGATGCCTCAGCTGAGCTGGTGGTGCCCGTTTTaGTTTGGCAGCTTGCTAGGGAACTTGGGGGCCTAC | + |
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Preference number: 3 (lower is better) Translates to: AGMPQLSWWCPF*FGSLLGNLGAY Trigger: GTAGGCCCCCAAGTTCCCTAGCAAGCTGCCAAACCAAAACGGGCACCACCAGCTCAGCTGAGGCATCCCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| 3UTR GCA 72 bp | TCCTGCCTGGCTGGGATGCCTCAGCTGAGCTGGTGGTaGCCGTTTTGGTTTGGCAGCTTGCTAGGGAACTTG | + |
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Preference number: 3 (lower is better) Translates to: SCLAGMPQLSWW*PFWFGSLLGNL Trigger: CAAGTTCCCTAGCAAGCTGCCAAACCAAAACGGGCACCACCAGCTCAGCTGAGGCATCCCAGCCAGGCAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| 3UTR-3UTR CAA 90 bp | AGCATGACAGGACGATCGCCATCAGGGTCCCAGGATCCCTGGAGGCAGACCGCCGGAGATCACATTGCTTaGAGTCACACTGGTCATGGG | + |
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Preference number: 3 (lower is better) Translates to: SMTGRSPSGSQDPWRQTAGDHIA*SHTGHG Trigger: CCCATGACCAGTGTGACTCAAAGCAATGTGATCTCC...GGCGGTCTGCCTCCAGGGATCCTGGGACCCTGATGGCGATCGTCCTGTCATGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| 3UTR TCA 72 bp | TGCCCTGACTGCTGTGATGCTATGTCCCAGATCAAATaGAGGGCCCAGCATGACAGGACGATCGCCATCAGG | + |
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Preference number: 3 (lower is better) Translates to: CPDCCDAMSQIK*RAQHDRTIAIR Trigger: CCTGATGGCGATCGTCCTGTCATGCTGGGCCCTTCATTTGATCTGGGACATAGCATCACAGCAGTCAGGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| 3UTR GCA 72 bp | CAAACACCAGCTGGCACCAAAGGATCCCTTCAACTTTaGAGGACAGATCCCGGTGGTGCGAGAACAGAGTTC | + |
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Preference number: 3 (lower is better) Translates to: QTPAGTKGSLQL*RTDPGGARTEF Trigger: GAACTCTGTTCTCGCACCACCGGGATCTGTCCTGCAAAGTTGAAGGGATCCTTTGGTGCCAGCTGGTGTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| 3UTR TCA 72 bp | CCGCCCACCTGCCTGCCAGGCTCGTGCATGGCTAGATaGTACATGAGGTATTGTGAACAGGAACCTGTTTTT | + |
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Preference number: 3 (lower is better) Translates to: PPTCLPGSCMAR*YMRYCEQEPVF Trigger: AAAAACAGGTTCCTGTTCACAATACCTCATGTATCATCTAGCCATGCACGAGCCTGGCAGGCAGGTGGGCGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| 3UTR GCA 72 bp | GGCAGAGGTGTGCGTTTGAATCAAGGGAGATCACATTaGTTTGAGTCACACTGGTCATGGGCAGCCTTTCCC | + |
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Preference number: 3 (lower is better) Translates to: GRGVRLNQGRSH*FESHWSWAAFP Trigger: GGGAAAGGCTGCCCATGACCAGTGTGACTCAAAGCAATGTGATCTCCCTTGATTCAAACGCACACCTCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| 3UTR CCA 72 bp | CAAACCACACACAAAAGCTGTGGGTTTAACCTGATGTaGGCAGGCTGCAGGGCCTTCAGGCAAAAACCAGCA | + |
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Preference number: 3 (lower is better) Translates to: QTTHKSCGFNLM*AGCRAFRQKPA Trigger: TGCTGGTTTTTGCCTGAAGGCCCTGCAGCCTGCCCACATCAGGTTAAACCCACAGCTTTTGTGTGTGGTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| 3UTR-3UTR CAA 90 bp | CATGTCTGTGCTGGGAAGCGCCATGGTGTGTCAACCAGAAATACAAAAAGCCAACTGGCTCCTTCCTCTTaGCGGGTGCCACTACTTGGT | + |
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Preference number: 3 (lower is better) Translates to: HVCAGKRHGVSTRNTKSQLAPSS*RVPLLG Trigger: ACCAAGTAGTGGCACCCGCAAAGAGGAAGGAGCCAG...TTGGCTTTTTGTATTTCTGGTTGACACACCATGGCGCTTCCCAGCACAGACATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| 3UTR-3UTR CAA 90 bp | CACATGTCTGTGCTGGGAAGCGCCATGGTGTGTCAACCAGAAATACAAAAAGCCCAGCCCTACAACCTGTaGTACAGCCATCTGAATGCG | + |
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Preference number: 3 (lower is better) Translates to: HMSVLGSAMVCQPEIQKAQPYNL*YSHLNA Trigger: CGCATTCAGATGGCTGTACAACAGGTTGTAGGGCTG...GGCTTTTTGTATTTCTGGTTGACACACCATGGCGCTTCCCAGCACAGACATGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| 3UTR CCA 72 bp | CCATGGTGTGTCAACCAGAAATACAAAAAGCCAACCTaGCCACCAGCCAGAGCCCCTCAAAGCCTTTCATGT | + |
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Preference number: 3 (lower is better) Translates to: PWCVNQKYKKPT*PPARAPQSLSC Trigger: ACATGAAAGGCTTTGAGGGGCTCTGGCTGGTGGCCAGGTTGGCTTTTTGTATTTCTGGTTGACACACCATGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| 3UTR CCA 72 bp | CTGACCATCTATAAGGTTAAGAGGTCTGCCCACCCCTaGGATAAAGCACAGGTATCAGGTAACAGGGCTGTA | + |
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Preference number: 3 (lower is better) Translates to: LTIYKVKRSAHP*DKAQVSGNRAV Trigger: TACAGCCCTGTTACCTGATACCTGTGCTTTATCCCAGGGGTGGGCAGACCTCTTAACCTTATAGATGGTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| 3UTR TCA 72 bp | CATACTACCAGCCCTACAACCTGTTGTACAGCCATCTaGATGCGTGTGTGGACATCCCCATCCATTCCATTA | + |
|
Preference number: 3 (lower is better) Translates to: HTTSPTTCCTAI*MRVWTSPSIPL Trigger: TAATGGAATGGATGGGGATGTCCACACACGCATTCAGATGGCTGTACAACAGGTTGTAGGGCTGGTAGTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
||
| 3UTR TCA 72 bp | CAACGTGAAAGATACAAAGCAATGAGAATCTGGTTCTaGACGTCTGGGATCCTGGGAGTCATCGGTAGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: QRERYKAMRIWF*TSGILGVIGSS Trigger: GCTGCTACCGATGACTCCCAGGATCCCAGACGTTCAGAACCAGATTCTCATTGCTTTGTATCTTTCACGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
||
| 3UTR CCA 72 bp | TCAGTTTGGATGGCTCTCCAATGGGGCCAATTGGGTTaGGAAAGTCAAGCAGACCAAATCTCTGTCTTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: SVWMALQWGQLG*ESQADQISVFV Trigger: CACAAAGACAGAGATTTGGTCTGCTTGACTTTCCCAACCCAATTGGCCCCATTGGAGAGCCATCCAAACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
||
| 3UTR CCA 72 bp | TTTCCTCAGTTTGGATGGCTCTCCAATGGGGCCAATTaGGTTGGGAAAGTCAAGCAGACCAAATCTCTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: FPQFGWLSNGAN*VGKVKQTKSLS Trigger: AGACAGAGATTTGGTCTGCTTGACTTTCCCAACCCAATTGGCCCCATTGGAGAGCCATCCAAACTGAGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
||
| 3UTR CCA 72 bp | AGCCAGAGGTGTGCAAATTACCTACTGTTGTTAACTTaGGGGCAGCGGCAAGAATGTGCCAGAATCAAACTC | + |
|
Preference number: 3 (lower is better) Translates to: SQRCANYLLLLT*GQRQECARIKL Trigger: GAGTTTGATTCTGGCACATTCTTGCCGCTGCCCCCAAGTTAACAACAGTAGGTAATTTGCACACCTCTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
||
| 3UTR TCA 72 bp | AGGTGTGCGTTTGAATCAAGGGAGATCACATTGCTTTaGGTCACACTGGTCATGGGCAGCCTTTCCCATAAA | + |
|
Preference number: 3 (lower is better) Translates to: RCAFESREITLL*VTLVMGSLSHK Trigger: TTTATGGGAAAGGCTGCCCATGACCAGTGTGACTCAAAGCAATGTGATCTCCCTTGATTCAAACGCACACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
||
| 3UTR CCA 72 bp | TTGAATCAAGGGAGATCACATTGCTTTGAGTCACACTaGTCATGGGCAGCCTTTCCCATAAATACTCTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: LNQGRSHCFESH*SWAAFPINTLL Trigger: CAGAAGAGTATTTATGGGAAAGGCTGCCCATGACCAGTGTGACTCAAAGCAATGTGATCTCCCTTGATTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
||
| 3UTR TCA 72 bp | AACAAAACTGACCCTCCAATAGCAGCGAAAACAACGTaGAAGATACAAAGCAATGAGAATCTGGTTCTGAAC | + |
|
Preference number: 3 (lower is better) Translates to: NKTDPPIAAKTT*KIQSNENLVLN Trigger: GTTCAGAACCAGATTCTCATTGCTTTGTATCTTTCACGTTGTTTTCGCTGCTATTGGAGGGTCAGTTTTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
||
| 3UTR CAA 72 bp | ACGTCGTCAGGAGCACCCGGGCTGGCTCCTTCCTCTTaGCGGGTGCCACTACTTGGTGGCTCCCGCCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TSSGAPGLAPSS*RVPLLGGSRLP Trigger: GGGCAGGCGGGAGCCACCAAGTAGTGGCACCCGCAAAGAGGAAGGAGCCAGCCCGGGTGCTCCTGACGACGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
||
| CDS-3UTR GCA 90 bp | ACAGGACGATCGCCATCAGGGTCCCAGGATCCCTGGAGGCAGACCGCCCACCTGGTGGCCCCCAGCAGCTaGAGGCGGCTCTTCTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: TGRSPSGSQDPWRQTAHLVAPSS*RRLFFK Trigger: CTTGAAGAAGAGCCGCCTGCAGCTGCTGGGGGCCAC...CAGGTGGGCGGTCTGCCTCCAGGGATCCTGGGACCCTGATGGCGATCGTCCTGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
||
| CDS-3UTR GCA 90 bp | AGCATGACAGGACGATCGCCATCAGGGTCCCAGGATCCCTGGAGGCAGACCGCCCCCAGGTTCAGGCCTTaGATCGCAGCCACCACGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SMTGRSPSGSQDPWRQTAPRFRP*IAATTL Trigger: GAGCGTGGTGGCTGCGATGCAAGGCCTGAACCTGGG...GGCGGTCTGCCTCCAGGGATCCTGGGACCCTGATGGCGATCGTCCTGTCATGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
||
| CDS-3UTR CCA 90 bp | GGTAGCAGCGCCATGAGAGGAGCCGTGGCCTGTCCCATGTGGTCCCACCTTCACGCTTCAATCTGTTCCTaGCAGGCACGGAGGCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GSSAMRGAVACPMWSHLHASICS*QARRQS Trigger: GGACTGCCTCCGTGCCTGCCAGGAACAGATTGAAGC...GTGAAGGTGGGACCACATGGGACAGGCCACGGCTCCTCTCATGGCGCTGCTACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
||
| CDS-3UTR CCA 90 bp | CCTTCACCTCTTCCCTCACATCCCCTCTTAAGCCTCCCGCTCTCCACCTTCTGCGGGTCGACGTTCTGCTaGGCCTGGCGCAGGCTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: PSPLPSHPLLSLPLSTFCGSTFC*AWRRLD Trigger: GTCAAGCCTGCGCCAGGCCCAGCAGAACGTCGACCC...GCAGAAGGTGGAGAGCGGGAGGCTTAAGAGGGGATGTGAGGGAAGAGGTGAAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
||
| CDS-3UTR TCA 90 bp | AGCATGACAGGACGATCGCCATCAGGGTCCCAGGATCCCTGGAGGCAGACCGCCCGGCCAGGTTCCACTTaGGCTTGTTCACCAGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SMTGRSPSGSQDPWRQTARPGST*ACSPEA Trigger: TGCTTCTGGTGAACAAGCTCAAGTGGAACCTGGCCG...GGCGGTCTGCCTCCAGGGATCCTGGGACCCTGATGGCGATCGTCCTGTCATGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
||
| CDS-3UTR CCA 90 bp | GGTAGCAGCGCCATGAGAGGAGCCGTGGCCTGTCCCATGTGGTCCCACCTTCACGTTCTCATCCGCCTCTaGCATTTTGGAGAGGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GSSAMRGAVACPMWSHLHVLIRL*HFGEEV Trigger: CACTTCCTCTCCAAAATGCCAGAGGCGGATGAGAAC...GTGAAGGTGGGACCACATGGGACAGGCCACGGCTCCTCTCATGGCGCTGCTACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
||
| 3UTR CAA 72 bp | TGGTGCCCGTTTTGGTTTGGCAGCTTGCTAGGGAACTaGGGGGCCTACAGCACTGCAGCTGGCTTCGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: WCPFWFGSLLGN*GAYSTAAGFAK Trigger: CTTTGCGAAGCCAGCTGCAGTGCTGTAGGCCCCCAAGTTCCCTAGCAAGCTGCCAAACCAAAACGGGCACCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
||
| CDS-3UTR CCA 90 bp | TACAGCCATCTGAATGCGTGTGTGGACATCCCCATCCATTCCATTAGAACCCCTCATCTCGCACGTCGGTaGGCGTGCAGGCCAGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: YSHLNACVDIPIHSIRTPHLARR*ACRPDQ Trigger: CTGGTCTGGCCTGCACGCCCACCGACGTGCGAGATG...AGGGGTTCTAATGGAATGGATGGGGATGTCCACACACGCATTCAGATGGCTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
||
| CDS-3UTR TCA 90 bp | TACAGCCATCTGAATGCGTGTGTGGACATCCCCATCCATTCCATTAGAACCCCTAGGTCTCCTCCGTCTTaGGCATGGCTCGCAGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: YSHLNACVDIPIHSIRTPRSPPS*AWLAAP Trigger: GGGTGCTGCGAGCCATGCTCAAGACGGAGGAGACCT...AGGGGTTCTAATGGAATGGATGGGGATGTCCACACACGCATTCAGATGGCTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
||
| CDS-3UTR GCA 90 bp | TGGGATGCCTCAGCTGAGCTGGTGGTGCCCGTTTTGGTTTGGCAGCTTGCTAGGAGGTCTGTGCATGCTTaGGGATGGTCTGCTTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: WDASAELVVPVLVWQLARRSVHA*GWSACS Trigger: AGAACAAGCAGACCATCCGCAAGCATGCACAGACCT...CCTAGCAAGCTGCCAAACCAAAACGGGCACCACCAGCTCAGCTGAGGCATCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
||
| CDS-3UTR GCA 90 bp | TACAGCCATCTGAATGCGTGTGTGGACATCCCCATCCATTCCATTAGAACCCCTTTGGGGTCGACGTTCTaGTGGGCCTGGCGCAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: YSHLNACVDIPIHSIRTPLGSTF*WAWRRL Trigger: AAGCCTGCGCCAGGCCCAGCAGAACGTCGACCCCAA...AGGGGTTCTAATGGAATGGATGGGGATGTCCACACACGCATTCAGATGGCTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
||
| CDS-3UTR CCA 90 bp | CACATGTCTGTGCTGGGAAGCGCCATGGTGTGTCAACCAGAAATACAAAAAGCCGGTACGCGCGGCGGATaGTCTCCACTTCGCAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: HMSVLGSAMVCQPEIQKAGTRGG*SPLRST Trigger: TGTGCTGCGAAGTGGAGACCATCCGCCGCGCGTACC...GGCTTTTTGTATTTCTGGTTGACACACCATGGCGCTTCCCAGCACAGACATGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
||
| CDS-3UTR CCA 90 bp | TACAGCCATCTGAATGCGTGTGTGGACATCCCCATCCATTCCATTAGAACCCCTCCCCCTCCTCCTCAGTaGCCTTGGGGTCGACGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YSHLNACVDIPIHSIRTPPPPPQ*PWGRRS Trigger: AGAACGTCGACCCCAAGGCCACTGAGGAGGAGGGGG...AGGGGTTCTAATGGAATGGATGGGGATGTCCACACACGCATTCAGATGGCTGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
||
| CDS-3UTR TCA 90 bp | TTAACTTGGGGGCAGCGGCAAGAATGTGCCAGAATCAAACTCTTTTGGAGTCCCGCAGCACCCGGTCGTTaGGGAGATTGGTGTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LTWGQRQECARIKLFWSPAAPGR*GDWCQG Trigger: ACCCTGACACCAATCTCCTCAACGACCGGGTGCTGC...GGGACTCCAAAAGAGTTTGATTCTGGCACATTCTTGCCGCTGCCCCCAAGTTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
||
| CDS-3UTR GCA 90 bp | CCTTCAACTTTGCAGGACAGATCCCGGTGGTGCGAGAACAGAGTTCTCTCTTCTGGAAGTTGTTGGGGCTaGCCAGGTTCAGGCCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PSTLQDRSRWCENRVLSSGSCWG*PGSGLA Trigger: TGCAAGGCCTGAACCTGGGCAGCCCCAACAACTTCC...AGAAGAGAGAACTCTGTTCTCGCACCACCGGGATCTGTCCTGCAAAGTTGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
||
| CDS-3UTR CCA 90 bp | CCTTCACCTCTTCCCTCACATCCCCTCTTAAGCCTCCCGCTCTCCACCTTCTGCGATTTTCCGCATGGATaGCACAATCTCCTTCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PSPLPSHPLLSLPLSTFCDFPHG*HNLLLH Trigger: GTGCAGAAGGAGATTGTGCCATCCATGCGGAAAATC...GCAGAAGGTGGAGAGCGGGAGGCTTAAGAGGGGATGTGAGGGAAGAGGTGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
||
| 3UTR CAA 72 bp | TTCCCAAGCACCTCATACTACCAGCCCTACAACCTGTaGTACAGCCATCTGAATGCGTGTGTGGACATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: FPSTSYYQPYNL*YSHLNACVDIP Trigger: GGGGATGTCCACACACGCATTCAGATGGCTGTACAACAGGTTGTAGGGCTGGTAGTATGAGGTGCTTGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
||
| CDS-3UTR GCA 90 bp | CACATGTCTGTGCTGGGAAGCGCCATGGTGTGTCAACCAGAAATACAAAAAGCCGGCCACAAAGGTCTGTaGATGCTTGCGGATGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HMSVLGSAMVCQPEIQKAGHKGL*MLADGL Trigger: CAGACCATCCGCAAGCATGCACAGACCTTTGTGGCC...GGCTTTTTGTATTTCTGGTTGACACACCATGGCGCTTCCCAGCACAGACATGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
||
| 3UTR CAA 72 bp | GCCCTAAACCTTCTCCAGCAGGGCAGAGGTGTGCGTTaGAATCAAGGGAGATCACATTGCTTTGAGTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: ALNLLQQGRGVR*NQGRSHCFESH Trigger: GTGTGACTCAAAGCAATGTGATCTCCCTTGATTCAAACGCACACCTCTGCCCTGCTGGAGAAGGTTTAGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
||
| 3UTR CAA 72 bp | AAGGCACAGAGCCAGAGGTGTGCAAATTACCTACTGTaGTTAACTTGGGGGCAGCGGCAAGAATGTGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KAQSQRCANYLL*LTWGQRQECAR Trigger: TCTGGCACATTCTTGCCGCTGCCCCCAAGTTAACAACAGTAGGTAATTTGCACACCTCTGGCTCTGTGCCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
||
| CDS-3UTR CCA 90 bp | CCTTCAACTTTGCAGGACAGATCCCGGTGGTGCGAGAACAGAGTTCTCTCTTCTAGCTACCATGGAGGGTaGGTTGGAAATGAACTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PSTLQDRSRWCENRVLSSSYHGG*VGNELH Trigger: GTGAAGTTCATTTCCAACCCACCCTCCATGGTAGCT...AGAAGAGAGAACTCTGTTCTCGCACCACCGGGATCTGTCCTGCAAAGTTGAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
||
| CDS-3UTR CCA 90 bp | CAGGGTGATGCAGATTCTATCTCTCTCTCTCTCTCTTTAAGACAGCTTTCAGATACGTTCTGCTGGGCCTaGCGCAGGCTTGACTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QGDADSISLSLSLRQLSDTFCWA*RRLDSR Trigger: TCTGGAGTCAAGCCTGCGCCAGGCCCAGCAGAACGT...ATCTGAAAGCTGTCTTAAAGAGAGAGAGAGAGAGATAGAATCTGCATCACCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
||
| 3UTR CAA 72 bp | CTCAGTTTGGATGGCTCTCCAATGGGGCCAATTGGGTaGGGAAAGTCAAGCAGACCAAATCTCTGTCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LSLDGSPMGPIG*GKSSRPNLCLC Trigger: ACAAAGACAGAGATTTGGTCTGCTTGACTTTCCCAACCCAATTGGCCCCATTGGAGAGCCATCCAAACTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
||
| 3UTR CAA 72 bp | GAGCCAGAGGTGTGCAAATTACCTACTGTTGTTAACTaGGGGGCAGCGGCAAGAATGTGCCAGAATCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: EPEVCKLPTVVN*GAAARMCQNQT Trigger: AGTTTGATTCTGGCACATTCTTGCCGCTGCCCCCAAGTTAACAACAGTAGGTAATTTGCACACCTCTGGCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
||
| CDS-3UTR GCA 90 bp | CATGTCTGTGCTGGGAAGCGCCATGGTGTGTCAACCAGAAATACAAAAAGCCAAAAAGAAAGTGCGTTGTaGGGTAGCAGGAGAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: HVCAGKRHGVSTRNTKSQKESAL*GSRRGS Trigger: ACTTCCTCTCCTGCTACCGCACAACGCACTTTCTTT...TTGGCTTTTTGTATTTCTGGTTGACACACCATGGCGCTTCCCAGCACAGACATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
||
| CDS-3UTR TCA 90 bp | CCAAAAAGTCCTAATAGAAAGGCACAGAGCCAGAGGTGTGCAAATTACCTACTGAGAGGAAGTGTTCGATaGAATCGTGGGGAGTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: PKSPNRKAQSQRCANYLLRGSVR*NRGESW Trigger: CCATGACTCCCCACGATTTCATCGAACACTTCCTCT...CAGTAGGTAATTTGCACACCTCTGGCTCTGTGCCTTTCTATTAGGACTTTTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
||
| CDS-3UTR CAA 90 bp | ACAGGACGATCGCCATCAGGGTCCCAGGATCCCTGGAGGCAGACCGCCCACCTGCAGGTCTCCTCCGTCTaGAGCATGGCTCGCAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: TGRSPSGSQDPWRQTAHLQVSSV*SMARST Trigger: GGTGCTGCGAGCCATGCTCAAGACGGAGGAGACCTG...CAGGTGGGCGGTCTGCCTCCAGGGATCCTGGGACCCTGATGGCGATCGTCCTGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
||
| CDS CCA 90 bp | TCCCCCTCCTCCTCAGTGGCCTTGGGGTCGACGTTCTGCTGGGCCTaGCGCAGGCTTGACTCCAGAAGGGCTTCAATCTGTTCCTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SPSSSVALGSTFCWA*RRLDSRRASICSWQ Trigger: CTGCCAGGAACAGATTGAAGCCCTTCTGGAGTCAAGCCTGCGCCAGGCCCAGCAGAACGTCGACCCCAAGGCCACTGAGGAGGAGGGGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
||
| CDS GCA 90 bp | TCCTCCACTTCCCCCTCCTCCTCAGTGGCCTTGGGGTCGACGTTCTaGTGGGCCTGGCGCAGGCTTGACTCCAGAAGGGCTTCAATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SSTSPSSSVALGSTF*WAWRRLDSRRASIC Trigger: ACAGATTGAAGCCCTTCTGGAGTCAAGCCTGCGCCAGGCCCAGCAGAACGTCGACCCCAAGGCCACTGAGGAGGAGGGGGAAGTGGAGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
||
| CDS CCA 90 bp | TCCACTTCCCCCTCCTCCTCAGTGGCCTTGGGGTCGACGTTCTGCTaGGCCTGGCGCAGGCTTGACTCCAGAAGGGCTTCAATCTGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: STSPSSSVALGSTFC*AWRRLDSRRASICS Trigger: GGAACAGATTGAAGCCCTTCTGGAGTCAAGCCTGCGCCAGGCCCAGCAGAACGTCGACCCCAAGGCCACTGAGGAGGAGGGGGAAGTGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
||
| CDS-3UTR CAA 90 bp | CCTTCACCTCTTCCCTCACATCCCCTCTTAAGCCTCCCGCTCTCCACCTTCTGCCGGTCGTTGAGGAGATaGGTGTCAGGGTACGCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: PSPLPSHPLLSLPLSTFCRSLRR*VSGYAR Trigger: CCGCGCGTACCCTGACACCAATCTCCTCAACGACCG...GCAGAAGGTGGAGAGCGGGAGGCTTAAGAGGGGATGTGAGGGAAGAGGTGAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
||
| CDS-3UTR CAA 90 bp | TGGGATGCCTCAGCTGAGCTGGTGGTGCCCGTTTTGGTTTGGCAGCTTGCTAGGGGGCCTGGCGCAGGCTaGACTCCAGAAGGGCTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: WDASAELVVPVLVWQLARGPGAG*TPEGLQ Trigger: TTGAAGCCCTTCTGGAGTCAAGCCTGCGCCAGGCCC...CCTAGCAAGCTGCCAAACCAAAACGGGCACCACCAGCTCAGCTGAGGCATCCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
||
| CDS GCA 90 bp | AAAGAAAGTGCGTTGTGCGGTAGCAGGAGAGGAAGTTGTTGGGGCTaGCCAGGTTCAGGCCTTGCATCGCAGCCACCACGCTCCCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: KESALCGSRRGSCWG*PGSGLASQPPRSQQ Trigger: CTGCTGGGAGCGTGGTGGCTGCGATGCAAGGCCTGAACCTGGGCAGCCCCAACAACTTCCTCTCCTGCTACCGCACAACGCACTTTCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
||
| CDS CCA 90 bp | CTCTGGAAAGAAAGTGCGTTGTGCGGTAGCAGGAGAGGAAGTTGTTaGGGCTGCCCAGGTTCAGGCCTTGCATCGCAGCCACCACGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LWKESALCGSRRGSC*GCPGSGLASQPPRS Trigger: GGAGCGTGGTGGCTGCGATGCAAGGCCTGAACCTGGGCAGCCCCAACAACTTCCTCTCCTGCTACCGCACAACGCACTTTCTTTCCAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
||
| CDS CCA 90 bp | TGGGCCTGGCGCAGGCTTGACTCCAGAAGGGCTTCAATCTGTTCCTaGCAGGCACGGAGGCAGTCCGGGTCACACTTGATGACTCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: WAWRRLDSRRASICS*QARRQSGSHLMTLE Trigger: TTCCAGAGTCATCAAGTGTGACCCGGACTGCCTCCGTGCCTGCCAGGAACAGATTGAAGCCCTTCTGGAGTCAAGCCTGCGCCAGGCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
||
| CDS-3UTR CAA 90 bp | CCTTCAACTTTGCAGGACAGATCCCGGTGGTGCGAGAACAGAGTTCTCTCTTCTCAGGAGAGGAAGTTGTaGGGGCTGCCCAGGTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PSTLQDRSRWCENRVLSSQERKL*GLPRFR Trigger: CCTGAACCTGGGCAGCCCCAACAACTTCCTCTCCTG...AGAAGAGAGAACTCTGTTCTCGCACCACCGGGATCTGTCCTGCAAAGTTGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
||
| CDS-3UTR CAA 90 bp | ATTATGTCACTATTTCATCCCTACCGCTGTGTGGCTGGTGCTGTGAACCTGCAGCAGAAGCAGTTCCATTaGCAGCAGCTCCTCGGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: IMSLFHPYRCVAGAVNLQQKQFH*QQLLGP Trigger: CGGCCCGAGGAGCTGCTGCAAATGGAACTGCTTCTG...CTGCAGGTTCACAGCACCAGCCACACAGCGGTAGGGATGAAATAGTGACATAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
||
| CDS-3UTR CAA 90 bp | CCCCAATCTCCTTGTCCAGGTAATGCCATCATGGTTCCTACTTCCAAACACCAGGCGGCCAGGTTCCACTaGAGCTTGTTCACCAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: PQSPCPGNAIMVPTSKHQAARFH*SLFTRS Trigger: GCTTCTGGTGAACAAGCTCAAGTGGAACCTGGCCGC...CTGGTGTTTGGAAGTAGGAACCATGATGGCATTACCTGGACAAGGAGATTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
||
| CDS CCA 90 bp | GGTCTGTGCATGCTTGCGGATGGTCTGCTTGTTCTCATCCGCCTCTaGCATTTTGGAGAGGAAGTGTTCGATGAAATCGTGGGGAGTCAT | + |
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Preference number: 5 (lower is better) Translates to: GLCMLADGLLVLIRL*HFGEEVFDEIVGSH Trigger: ATGACTCCCCACGATTTCATCGAACACTTCCTCTCCAAAATGCCAGAGGCGGATGAGAACAAGCAGACCATCCGCAAGCATGCACAGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| CDS-3UTR CAA 90 bp | AGTCCTAATAGAAAGGCACAGAGCCAGAGGTGTGCAAATTACCTACTGTTGTTAGCCCAGGTTCAGGCCTaGCATCGCAGCCACCACGCT | + |
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Preference number: 5 (lower is better) Translates to: SPNRKAQSQRCANYLLLLAQVQA*HRSHHA Trigger: AGCGTGGTGGCTGCGATGCAAGGCCTGAACCTGGGC...TAACAACAGTAGGTAATTTGCACACCTCTGGCTCTGTGCCTTTCTATTAGGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| CDS-3UTR CAA 90 bp | CAGGGTGATGCAGATTCTATCTCTCTCTCTCTCTCTTTAAGACAGCTTTCAGATCGCAGCACCCGGTCGTaGAGGAGATTGGTGTCAGGG | + |
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Preference number: 5 (lower is better) Translates to: QGDADSISLSLSLRQLSDRSTRS*RRLVSG Trigger: CCCTGACACCAATCTCCTCAACGACCGGGTGCTGCG...ATCTGAAAGCTGTCTTAAAGAGAGAGAGAGAGAGATAGAATCTGCATCACCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| CDS-3UTR CAA 90 bp | ATTATGTCACTATTTCATCCCTACCGCTGTGTGGCTGGTGCTGTGAACCTGCAGTCCGCCTCTGGCATTTaGGAGAGGAAGTGTTCGATG | + |
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Preference number: 5 (lower is better) Translates to: IMSLFHPYRCVAGAVNLQSASGI*ERKCSM Trigger: CATCGAACACTTCCTCTCCAAAATGCCAGAGGCGGA...CTGCAGGTTCACAGCACCAGCCACACAGCGGTAGGGATGAAATAGTGACATAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| CDS-3UTR CAA 90 bp | TACAGCCATCTGAATGCGTGTGTGGACATCCCCATCCATTCCATTAGAACCCCTAGGTTCCACTTGAGCTaGTTCACCAGAAGCAGTTCC | + |
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Preference number: 5 (lower is better) Translates to: YSHLNACVDIPIHSIRTPRFHLS*FTRSSS Trigger: GGAACTGCTTCTGGTGAACAAGCTCAAGTGGAACCT...AGGGGTTCTAATGGAATGGATGGGGATGTCCACACACGCATTCAGATGGCTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| CDS-3UTR CAA 90 bp | CATGTCTGTGCTGGGAAGCGCCATGGTGTGTCAACCAGAAATACAAAAAGCCAACAGTCCGGGTCACACTaGATGACTCTGGAAAGAAAG | + |
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Preference number: 5 (lower is better) Translates to: HVCAGKRHGVSTRNTKSQQSGSH*MTLERK Trigger: CTTTCTTTCCAGAGTCATCAAGTGTGACCCGGACTG...TTGGCTTTTTGTATTTCTGGTTGACACACCATGGCGCTTCCCAGCACAGACATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| CDS-3UTR CAA 90 bp | GCTCCCTACTCTCAGGGTGATGCAGATTCTATCTCTCTCTCTCTCTCTTTAAGAACCATGGAGGGTGGGTaGGAAATGAACTTCACATCT | + |
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Preference number: 5 (lower is better) Translates to: APYSQGDADSISLSLSLRTMEGG*EMNFTS Trigger: AGATGTGAAGTTCATTTCCAACCCACCCTCCATGGT...TCTTAAAGAGAGAGAGAGAGAGATAGAATCTGCATCACCCTGAGAGTAGGGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| CDS GCA 72 bp | TCCCCCTCCTCCTCAGTGGCCTTGGGGTCGACGTTCTaGTGGGCCTGGCGCAGGCTTGACTCCAGAAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: SPSSSVALGSTF*WAWRRLDSRRA Trigger: AGCCCTTCTGGAGTCAAGCCTGCGCCAGGCCCAGCAGAACGTCGACCCCAAGGCCACTGAGGAGGAGGGGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| CDS CCA 72 bp | CCCTCCTCCTCAGTGGCCTTGGGGTCGACGTTCTGCTaGGCCTGGCGCAGGCTTGACTCCAGAAGGGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: PSSSVALGSTFC*AWRRLDSRRAS Trigger: TGAAGCCCTTCTGGAGTCAAGCCTGCGCCAGGCCCAGCAGAACGTCGACCCCAAGGCCACTGAGGAGGAGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| CDS CAA 90 bp | CCTCAGTGGCCTTGGGGTCGACGTTCTGCTGGGCCTGGCGCAGGCTaGACTCCAGAAGGGCTTCAATCTGTTCCTGGCAGGCACGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: PQWPWGRRSAGPGAG*TPEGLQSVPGRHGG Trigger: GCCTCCGTGCCTGCCAGGAACAGATTGAAGCCCTTCTGGAGTCAAGCCTGCGCCAGGCCCAGCAGAACGTCGACCCCAAGGCCACTGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| CDS CAA 72 bp | TCCTCCGTCTTGAGCATGGCTCGCAGCACCCGGTCGTaGAGGAGATTGGTGTCAGGGTACGCGCGGCGGATG | + |
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Preference number: 6 (lower is better) Translates to: SSVLSMARSTRS*RRLVSGYARRM Trigger: CATCCGCCGCGCGTACCCTGACACCAATCTCCTCAACGACCGGGTGCTGCGAGCCATGCTCAAGACGGAGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| CDS CAA 90 bp | TCCTCCGTCTTGAGCATGGCTCGCAGCACCCGGTCGTTGAGGAGATaGGTGTCAGGGTACGCGCGGCGGATGGTCTCCACTTCGCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: SSVLSMARSTRSLRR*VSGYARRMVSTSQH Trigger: GTGCTGCGAAGTGGAGACCATCCGCCGCGCGTACCCTGACACCAATCTCCTCAACGACCGGGTGCTGCGAGCCATGCTCAAGACGGAGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| CDS CAA 90 bp | GCACAGGTCTCCTCCGTCTTGAGCATGGCTCGCAGCACCCGGTCGTaGAGGAGATTGGTGTCAGGGTACGCGCGGCGGATGGTCTCCACT | + |
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Preference number: 6 (lower is better) Translates to: AQVSSVLSMARSTRS*RRLVSGYARRMVST Trigger: AGTGGAGACCATCCGCCGCGCGTACCCTGACACCAATCTCCTCAACGACCGGGTGCTGCGAGCCATGCTCAAGACGGAGGAGACCTGTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| CDS CAA 72 bp | CCTTGGGGTCGACGTTCTGCTGGGCCTGGCGCAGGCTaGACTCCAGAAGGGCTTCAATCTGTTCCTGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: PWGRRSAGPGAG*TPEGLQSVPGR Trigger: CCTGCCAGGAACAGATTGAAGCCCTTCTGGAGTCAAGCCTGCGCCAGGCCCAGCAGAACGTCGACCCCAAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| CDS CCA 72 bp | CGCAGGCTTGACTCCAGAAGGGCTTCAATCTGTTCCTaGCAGGCACGGAGGCAGTCCGGGTCACACTTGATG | + |
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Preference number: 6 (lower is better) Translates to: RRLDSRRASICS*QARRQSGSHLM Trigger: CATCAAGTGTGACCCGGACTGCCTCCGTGCCTGCCAGGAACAGATTGAAGCCCTTCTGGAGTCAAGCCTGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| CDS TCA 72 bp | TCCGCATGGATGGCACAATCTCCTTCTGCACGCACTTaGAGTAAGATACGGAGGGCGCACAGGTCTCCTCCG | + |
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Preference number: 6 (lower is better) Translates to: SAWMAQSPSART*SKIRRAHRSPP Trigger: CGGAGGAGACCTGTGCGCCCTCCGTATCTTACTTCAAGTGCGTGCAGAAGGAGATTGTGCCATCCATGCGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| CDS CAA 72 bp | TCGTGGGGAGTCATGGCGGCCAGGTTCCACTTGAGCTaGTTCACCAGAAGCAGTTCCATTTGCAGCAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: SWGVMAARFHLS*FTRSSSICSSS Trigger: GGAGCTGCTGCAAATGGAACTGCTTCTGGTGAACAAGCTCAAGTGGAACCTGGCCGCCATGACTCCCCACGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| CDS CAA 90 bp | GCATGCTTGCGGATGGTCTGCTTGTTCTCATCCGCCTCTGGCATTTaGGAGAGGAAGTGTTCGATGAAATCGTGGGGAGTCATGGCGGCC | + |
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Preference number: 6 (lower is better) Translates to: ACLRMVCLFSSASGI*ERKCSMKSWGVMAA Trigger: GGCCGCCATGACTCCCCACGATTTCATCGAACACTTCCTCTCCAAAATGCCAGAGGCGGATGAGAACAAGCAGACCATCCGCAAGCATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| CDS TCA 72 bp | CATCCGCCTCTGGCATTTTGGAGAGGAAGTGTTCGATaGAATCGTGGGGAGTCATGGCGGCCAGGTTCCACT | + |
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Preference number: 6 (lower is better) Translates to: HPPLAFWRGSVR*NRGESWRPGST Trigger: AGTGGAACCTGGCCGCCATGACTCCCCACGATTTCATCGAACACTTCCTCTCCAAAATGCCAGAGGCGGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| CDS CAA 72 bp | GCCACAAAGGTCTGTGCATGCTTGCGGATGGTCTGCTaGTTCTCATCCGCCTCTGGCATTTTGGAGAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: ATKVCACLRMVC*FSSASGILERK Trigger: CTTCCTCTCCAAAATGCCAGAGGCGGATGAGAACAAGCAGACCATCCGCAAGCATGCACAGACCTTTGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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| CDS CAA 72 bp | CGGATGGTCTGCTTGTTCTCATCCGCCTCTGGCATTTaGGAGAGGAAGTGTTCGATGAAATCGTGGGGAGTC | + |
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Preference number: 6 (lower is better) Translates to: RMVCLFSSASGI*ERKCSMKSWGV Trigger: GACTCCCCACGATTTCATCGAACACTTCCTCTCCAAAATGCCAGAGGCGGATGAGAACAAGCAGACCATCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093962.5 |
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