Pregenerated sensors for CCNB3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051592Ensembl transcript IDs: ENSMUST00000056725.8, ENSMUST00000115752.8
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | ACTGCAGAGTTACTGAAGAAACGTCTTCTTTTAGGGAGCTGCTGCTaGTTCCTTAAAGGTGAGGGCTTCTTCAGGCAAGGGGCCTCGCCC | + |
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Preference number: 5 (lower is better) Translates to: TAELLKKRLLLGSCC*FLKGEGFFRQGASP Trigger: GGGCGAGGCCCCTTGCCTGAAGAAGCCCTCACCTTTAAGGAAGCAGCAGCAGCTCCCTAAAAGAAGACGTTTCTTCAGTAACTCTGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS GCA 90 bp | TGTACTGCAGAGTTACTGAAGAAACGTCTTCTTTTAGGGAGCTGCTaGTGCTTCCTTAAAGGTGAGGGCTTCTTCAGGCAAGGGGCCTCG | + |
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Preference number: 5 (lower is better) Translates to: CTAELLKKRLLLGSC*CFLKGEGFFRQGAS Trigger: CGAGGCCCCTTGCCTGAAGAAGCCCTCACCTTTAAGGAAGCAGCAGCAGCTCCCTAAAAGAAGACGTTTCTTCAGTAACTCTGCAGTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS GCA 90 bp | TCTTGTACTGCAGAGTTACTGAAGAAACGTCTTCTTTTAGGGAGCTaGTGCTGCTTCCTTAAAGGTGAGGGCTTCTTCAGGCAAGGGGCC | + |
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Preference number: 5 (lower is better) Translates to: SCTAELLKKRLLLGS*CCFLKGEGFFRQGA Trigger: GGCCCCTTGCCTGAAGAAGCCCTCACCTTTAAGGAAGCAGCAGCAGCTCCCTAAAAGAAGACGTTTCTTCAGTAACTCTGCAGTACAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS GCA 90 bp | CTTCTGTTTGGACAATTCCCCAGGACTGATATGCTTCTTTGGCAGTaGAGATGGCCACTGGGAAGGGGGATCTTTCTCAGTGGTAGACAT | + |
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Preference number: 5 (lower is better) Translates to: LLFGQFPRTDMLLWQ*RWPLGRGIFLSGRH Trigger: ATGTCTACCACTGAGAAAGATCCCCCTTCCCAGTGGCCATCTGCACTGCCAAAGAAGCATATCAGTCCTGGGGAATTGTCCAAACAGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS GCA 90 bp | AGTGGGTTTCTCAAATGGAACCCTGTCTCTTTAGTAATAGCCTGCTaGATCTCTAACTTTAAAGGCGTATGGGTGGAGGCTGGCTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: SGFLKWNPVSLVIAC*ISNFKGVWVEAGSS Trigger: GGAGGAGCCAGCCTCCACCCATACGCCTTTAAAGTTAGAGATGCAGCAGGCTATTACTAAAGAGACAGGGTTCCATTTGAGAAACCCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS CCA 90 bp | TTTGGACAATTCCCCAGGACTGATATGCTTCTTTGGCAGTGCAGATaGCCACTGGGAAGGGGGATCTTTCTCAGTGGTAGACATCTTAAA | + |
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Preference number: 5 (lower is better) Translates to: FGQFPRTDMLLWQCR*PLGRGIFLSGRHLK Trigger: TTTAAGATGTCTACCACTGAGAAAGATCCCCCTTCCCAGTGGCCATCTGCACTGCCAAAGAAGCATATCAGTCCTGGGGAATTGTCCAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS CCA 90 bp | GTCTCTTTAGTAATAGCCTGCTGCATCTCTAACTTTAAAGGCGTATaGGTGGAGGCTGGCTCCTCCCTGCTGAGCTGTTTCTTAAAAGCT | + |
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Preference number: 5 (lower is better) Translates to: VSLVIACCISNFKGV*VEAGSSLLSCFLKA Trigger: AGCTTTTAAGAAACAGCTCAGCAGGGAGGAGCCAGCCTCCACCCATACGCCTTTAAAGTTAGAGATGCAGCAGGCTATTACTAAAGAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS GCA 90 bp | CAACACTGTGAGTCCTCCTCCATGTTATGCTTTGGTGAGACATGCTaGTTCTTCTGTTTGGACAATTCCCCAGGACTGATATGCTTCTTT | + |
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Preference number: 5 (lower is better) Translates to: QHCESSSMLCFGETC*FFCLDNSPGLICFF Trigger: AAAGAAGCATATCAGTCCTGGGGAATTGTCCAAACAGAAGAAGCAGCATGTCTCACCAAAGCATAACATGGAGGAGGACTCACAGTGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS CCA 90 bp | CACCCATCTCAGTGTCAGGCTTATGATCAAAGGATAAAGAGTCCATaGGGTTTGCCTTTTTATTGCTGGAATTCTCTTCCAAGGCCAATA | + |
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Preference number: 5 (lower is better) Translates to: HPSQCQAYDQRIKSP*GLPFYCWNSLPRPI Trigger: TATTGGCCTTGGAAGAGAATTCCAGCAATAAAAAGGCAAACCCCATGGACTCTTTATCCTTTGATCATAAGCCTGACACTGAGATGGGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS CCA 90 bp | ATCTCACAGATGAAGCGGGATAAGGTTAGTGTCTTCATGCTAGCATaGATGCACGAAGCATATCTACGCAGAAAATTATATGCTGTGGGA | + |
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Preference number: 5 (lower is better) Translates to: ISQMKRDKVSVFMLA*MHEAYLRRKLYAVG Trigger: TCCCACAGCATATAATTTTCTGCGTAGATATGCTTCGTGCATCCATGCTAGCATGAAGACACTAACCTTATCCCGCTTCATCTGTGAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS CCA 90 bp | TGGGATCGGAAGTTCAGCAAATGGTTTAACTTCCTGACCAAGATATaGAGTTCTGCCATCTTGTACCCAGTGAAATATTCCAGTGTAGGA | + |
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Preference number: 5 (lower is better) Translates to: WDRKFSKWFNFLTKI*SSAILYPVKYSSVG Trigger: TCCTACACTGGAATATTTCACTGGGTACAAGATGGCAGAACTCCATATCTTGGTCAGGAAGTTAAACCATTTGCTGAACTTCCGATCCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS TCA 90 bp | ACTAGACACATATGGGTTGGAGTTCTCGACAGGATTGAATGCCTTTaGACTTGGCATGATAGCACTGGAATTGTCTGTTCTGGATTCAAA | + |
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Preference number: 5 (lower is better) Translates to: TRHIWVGVLDRIECL*TWHDSTGIVCSGFK Trigger: TTTGAATCCAGAACAGACAATTCCAGTGCTATCATGCCAAGTTCAAAGGCATTCAATCCTGTCGAGAACTCCAACCCATATGTGTCTAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS GCA 90 bp | AGACATCTTAAAGAACAATGGCTTGCGAATGACTGTTTCTTGTACTaGAGAGTTACTGAAGAAACGTCTTCTTTTAGGGAGCTGCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: RHLKEQWLANDCFLY*RVTEETSSFRELLL Trigger: CAGCAGCAGCTCCCTAAAAGAAGACGTTTCTTCAGTAACTCTGCAGTACAAGAAACAGTCATTCGCAAGCCATTGTTCTTTAAGATGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS TCA 90 bp | GCATTAGTTACATCTTCAAACACTGATCTCCTCTTTACTGCGCCTTaGGTTGAAGATGAAGATGAAGATGCTGCATGGTTACTCTTTCCA | + |
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Preference number: 5 (lower is better) Translates to: ALVTSSNTDLLFTAP*VEDEDEDAAWLLFP Trigger: TGGAAAGAGTAACCATGCAGCATCTTCATCTTCATCTTCAACTCAAGGCGCAGTAAAGAGGAGATCAGTGTTTGAAGATGTAACTAATGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS GCA 90 bp | TTCAATGTATCTTCATCAGCAGAACTGAAAGGAGAAAATAGGTCCTaGGAGAAGAAGTTCTTGTCATCATTTGAAGCCACCGATTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: FNVSSSAELKGENRS*EKKFLSSFEATDSF Trigger: GAAGGAATCGGTGGCTTCAAATGATGACAAGAACTTCTTCTCGCAGGACCTATTTTCTCCTTTCAGTTCTGCTGATGAAGATACATTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS GCA 90 bp | CATGCTAGCATGGATGCACGAAGCATATCTACGCAGAAAATTATATaGTGTGGGAATATTGATGTCAAAGTTGAGAGTTTGCAGGATGCT | + |
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Preference number: 5 (lower is better) Translates to: HASMDARSISTQKII*CGNIDVKVESLQDA Trigger: AGCATCCTGCAAACTCTCAACTTTGACATCAATATTCCCACAGCATATAATTTTCTGCGTAGATATGCTTCGTGCATCCATGCTAGCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS CCA 90 bp | ATTAGTGCCTTTTCCCTGAGGGTCAGGATTATTTTTAGAAGAGGATaGCTTCTTTGTATGGGTTGCTTCATTGGCACTATGTTTCCCTTT | + |
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Preference number: 5 (lower is better) Translates to: ISAFSLRVRIIFRRG*LLCMGCFIGTMFPF Trigger: AAAGGGAAACATAGTGCCAATGAAGCAACCCATACAAAGAAGCCATCCTCTTCTAAAAATAATCCTGACCCTCAGGGAAAAGGCACTAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS TCA 90 bp | TTCTCTTGTAACACCTGTGGCTTCTTCAAGATGCTTGCATCTTCTTaGGTATTATATTTCTCTTCCAGTGATGGCTCCTGTAACAAAGAC | + |
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Preference number: 5 (lower is better) Translates to: FSCNTCGFFKMLASS*VLYFSSSDGSCNKD Trigger: GTCTTTGTTACAGGAGCCATCACTGGAAGAGAAATATAATACTCAAGAAGATGCAAGCATCTTGAAGAAGCCACAGGTGTTACAAGAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS GCA 90 bp | AGGGTCAGGATTATTTTTAGAAGAGGATGGCTTCTTTGTATGGGTTaGTTCATTGGCACTATGTTTCCCTTTAAAAGTAACTGGCTCTGT | + |
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Preference number: 5 (lower is better) Translates to: RVRIIFRRGWLLCMG*FIGTMFPFKSNWLC Trigger: ACAGAGCCAGTTACTTTTAAAGGGAAACATAGTGCCAATGAAGCAACCCATACAAAGAAGCCATCCTCTTCTAAAAATAATCCTGACCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS TCA 90 bp | GTCATTTCCTGCCACTCTGACTGTGCTTGCTGTAAGGTTATTGTGTaGGTAGTACTCTTTCTTTTCAGTAAAGATGTATTTTGTTCCCTA | + |
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Preference number: 5 (lower is better) Translates to: VISCHSDCACCKVIV*VVLFLFSKDVFCSL Trigger: TAGGGAACAAAATACATCTTTACTGAAAAGAAAGAGTACTACTCACACAATAACCTTACAGCAAGCACAGTCAGAGTGGCAGGAAATGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS TCA 90 bp | TGGCAATGGATTCTGAAGGAACTCAGGTATAGGTTCCTTCCTATGTaGTCCAGGCTTTATAGAAAACAAATTTCTGTCTTCATCTGTCAT | + |
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Preference number: 5 (lower is better) Translates to: WQWILKELRYRFLPM*SRLYRKQISVFICH Trigger: ATGACAGATGAAGACAGAAATTTGTTTTCTATAAAGCCTGGATCACATAGGAAGGAACCTATACCTGAGTTCCTTCAGAATCCATTGCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS CCA 90 bp | CATACAGGGTATCTATGTTGTACTCTTCATCAGTTAATACCATTCTaGCTATTTCACCCATCTCAGTGTCAGGCTTATGATCAAAGGATA | + |
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Preference number: 5 (lower is better) Translates to: HTGYLCCTLHQLIPF*LFHPSQCQAYDQRI Trigger: TATCCTTTGATCATAAGCCTGACACTGAGATGGGTGAAATAGCCAGAATGGTATTAACTGATGAAGAGTACAACATAGATACCCTGTATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS CCA 90 bp | AATTCAAAAGATTCTCTAGATCTTGCTTGCTCAAAGGAGGGATTTTaGCGACTTCAAAGTAGGTCTCTTCAGAATACTTCTCAAACACAT | + |
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Preference number: 5 (lower is better) Translates to: NSKDSLDLACSKEGF*RLQSRSLQNTSQTH Trigger: ATGTGTTTGAGAAGTATTCTGAAGAGACCTACTTTGAAGTCGCCAAAATCCCTCCTTTGAGCAAGCAAGATCTAGAGAATCTTTTGAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS GCA 90 bp | CTTTGTTATTTGTATTCTCTTGTAACACCTGTGGCTTCTTCAAGATaGTTGCATCTTCTTGAGTATTATATTTCTCTTCCAGTGATGGCT | + |
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Preference number: 5 (lower is better) Translates to: LCYLYSLVTPVASSR*LHLLEYYISLPVMA Trigger: AGCCATCACTGGAAGAGAAATATAATACTCAAGAAGATGCAAGCATCTTGAAGAAGCCACAGGTGTTACAAGAGAATACAAATAACAAAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS GCA 90 bp | AGAAAATTATATGCTGTGGGAATATTGATGTCAAAGTTGAGAGTTTaGAGGATGCTGCTTTCCAAAGATACCATATCACTCTTTTCATAC | + |
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Preference number: 5 (lower is better) Translates to: RKLYAVGILMSKLRV*RMLLSKDTISLFSY Trigger: GTATGAAAAGAGTGATATGGTATCTTTGGAAAGCAGCATCCTGCAAACTCTCAACTTTGACATCAATATTCCCACAGCATATAATTTTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS GCA 72 bp | GGACAATTCCCCAGGACTGATATGCTTCTTTGGCAGTaGAGATGGCCACTGGGAAGGGGGATCTTTCTCAGT | + |
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Preference number: 6 (lower is better) Translates to: GQFPRTDMLLWQ*RWPLGRGIFLS Trigger: ACTGAGAAAGATCCCCCTTCCCAGTGGCCATCTGCACTGCCAAAGAAGCATATCAGTCCTGGGGAATTGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS CCA 72 bp | GTAATAGCCTGCTGCATCTCTAACTTTAAAGGCGTATaGGTGGAGGCTGGCTCCTCCCTGCTGAGCTGTTTC | + |
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Preference number: 6 (lower is better) Translates to: VIACCISNFKGV*VEAGSSLLSCF Trigger: GAAACAGCTCAGCAGGGAGGAGCCAGCCTCCACCCATACGCCTTTAAAGTTAGAGATGCAGCAGGCTATTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS CCA 72 bp | CTGTTTGGACAATTCCCCAGGACTGATATGCTTCTTTaGCAGTGCAGATGGCCACTGGGAAGGGGGATCTTT | + |
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Preference number: 6 (lower is better) Translates to: LFGQFPRTDMLL*QCRWPLGRGIF Trigger: AAAGATCCCCCTTCCCAGTGGCCATCTGCACTGCCAAAGAAGCATATCAGTCCTGGGGAATTGTCCAAACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS CCA 72 bp | CACAGTGGACACCTCCATTTGAGGGCTATGCTTGTCTaGCAGTACAGATGGCCCATGGAAATGGGAATCTTT | + |
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Preference number: 6 (lower is better) Translates to: HSGHLHLRAMLV*QYRWPMEMGIF Trigger: AAAGATTCCCATTTCCATGGGCCATCTGTACTGCCAGACAAGCATAGCCCTCAAATGGAGGTGTCCACTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS GCA 72 bp | GCAGAGTTACTGAAGAAACGTCTTCTTTTAGGGAGCTaGTGCTGCTTCCTTAAAGGTGAGGGCTTCTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: AELLKKRLLLGS*CCFLKGEGFFR Trigger: CCTGAAGAAGCCCTCACCTTTAAGGAAGCAGCAGCAGCTCCCTAAAAGAAGACGTTTCTTCAGTAACTCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS CAA 90 bp | TCCTCCTCCATGTTATGCTTTGGTGAGACATGCTGCTTCTTCTGTTaGGACAATTCCCCAGGACTGATATGCTTCTTTGGCAGTGCAGAT | + |
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Preference number: 6 (lower is better) Translates to: SSSMLCFGETCCFFC*DNSPGLICFFGSAD Trigger: ATCTGCACTGCCAAAGAAGCATATCAGTCCTGGGGAATTGTCCAAACAGAAGAAGCAGCATGTCTCACCAAAGCATAACATGGAGGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS TCA 72 bp | CTCAAGAGAGTCTCTACGTTATTAGATGGATTCTCCTaGAACGCTAAGGCCACCCTCTTCAGACTGGGATTC | + |
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Preference number: 6 (lower is better) Translates to: LKRVSTLLDGFS*NAKATLFRLGF Trigger: GAATCCCAGTCTGAAGAGGGTGGCCTTAGCGTTTCAGGAGAATCCATCTAATAACGTAGAGACTCTCTTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS GCA 72 bp | GAGTTACTGAAGAAACGTCTTCTTTTAGGGAGCTGCTaGTGCTTCCTTAAAGGTGAGGGCTTCTTCAGGCAA | + |
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Preference number: 6 (lower is better) Translates to: ELLKKRLLLGSC*CFLKGEGFFRQ Trigger: TTGCCTGAAGAAGCCCTCACCTTTAAGGAAGCAGCAGCAGCTCCCTAAAAGAAGACGTTTCTTCAGTAACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS TCA 72 bp | GTGAAGATAAGGACTCCTTCAAAGTTGCCGCTTCATTaGTGCTGGTCTCTTCCAAGGACAAGGATTTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: VKIRTPSKLPLH*CWSLPRTRISQ Trigger: CTGAGAAATCCTTGTCCTTGGAAGAGACCAGCATCAATGAAGCGGCAACTTTGAAGGAGTCCTTATCTTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS GCA 72 bp | TTTGGGGTAACATCTGTTTTAGTGCTAGGTTTCTCCTaGAGAGTAGATTCGTCAGCTGTAGAGTTCTCCACC | + |
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Preference number: 6 (lower is better) Translates to: FGVTSVLVLGFS*RVDSSAVEFST Trigger: GGTGGAGAACTCTACAGCTGACGAATCTACTCTGCAGGAGAAACCTAGCACTAAAACAGATGTTACCCCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS GCA 72 bp | CAGAGTAGATTCGTCAGCTGTAGAGTTCTCCACCAATaGCAATACTTCCCTCAAGAGAGTCTCTACGTTATT | + |
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Preference number: 6 (lower is better) Translates to: QSRFVSCRVLHQ*QYFPQESLYVI Trigger: AATAACGTAGAGACTCTCTTGAGGGAAGTATTGGCATTGGTGGAGAACTCTACAGCTGACGAATCTACTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS CCA 72 bp | AAGAGGAATTCCTGTTCCAGAGCAACAGTCCTCTCTTaGCTTAATTCTTCAGTAGAGGAGCATCTGTCCTTA | + |
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Preference number: 6 (lower is better) Translates to: KRNSCSRATVLS*LNSSVEEHLSL Trigger: TAAGGACAGATGCTCCTCTACTGAAGAATTAAGCCAAGAGAGGACTGTTGCTCTGGAACAGGAATTCCTCTT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS CCA 72 bp | AGGATAAAGAGTCCATGGGGTTTGCCTTTTTATTGCTaGAATTCTCTTCCAAGGCCAATAGTTCCTTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: RIKSPWGLPFYC*NSLPRPIVPLG Trigger: CCCCAAAGGAACTATTGGCCTTGGAAGAGAATTCCAGCAATAAAAAGGCAAACCCCATGGACTCTTTATCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS CAA 72 bp | ATGTTATGCTTTGGTGAGACATGCTGCTTCTTCTGTTaGGACAATTCCCCAGGACTGATATGCTTCTTTGGC | + |
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Preference number: 6 (lower is better) Translates to: MLCFGETCCFFC*DNSPGLICFFG Trigger: GCCAAAGAAGCATATCAGTCCTGGGGAATTGTCCAAACAGAAGAAGCAGCATGTCTCACCAAAGCATAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS CAA 72 bp | TGTGAAGATAAGGACTCCTTCAAAGTTGCCGCTTCATaGATGCTGGTCTCTTCCAAGGACAAGGATTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: CEDKDSFKVAAS*MLVSSKDKDFS Trigger: TGAGAAATCCTTGTCCTTGGAAGAGACCAGCATCAATGAAGCGGCAACTTTGAAGGAGTCCTTATCTTCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS CAA 72 bp | GAACTAGACACATATGGGTTGGAGTTCTCGACAGGATaGAATGCCTTTGAACTTGGCATGATAGCACTGGAA | + |
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Preference number: 6 (lower is better) Translates to: ELDTYGLEFSTG*NAFELGMIALE Trigger: TTCCAGTGCTATCATGCCAAGTTCAAAGGCATTCAATCCTGTCGAGAACTCCAACCCATATGTGTCTAGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS CAA 90 bp | TCAGCAGAACTGAAAGGAGAAAATAGGTCCTGCGAGAAGAAGTTCTaGTCATCATTTGAAGCCACCGATTCCTTCCTATGTGCTCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: SAELKGENRSCEKKF*SSFEATDSFLCALS Trigger: AGAAAGAGCACATAGGAAGGAATCGGTGGCTTCAAATGATGACAAGAACTTCTTCTCGCAGGACCTATTTTCTCCTTTCAGTTCTGCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS TCA 72 bp | ATATGGGTTGGAGTTCTCGACAGGATTGAATGCCTTTaGACTTGGCATGATAGCACTGGAATTGTCTGTTCT | + |
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Preference number: 6 (lower is better) Translates to: IWVGVLDRIECL*TWHDSTGIVCS Trigger: AGAACAGACAATTCCAGTGCTATCATGCCAAGTTCAAAGGCATTCAATCCTGTCGAGAACTCCAACCCATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS GCA 72 bp | TCTTCATCAGCAGAACTGAAAGGAGAAAATAGGTCCTaGGAGAAGAAGTTCTTGTCATCATTTGAAGCCACC | + |
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Preference number: 6 (lower is better) Translates to: SSSAELKGENRS*EKKFLSSFEAT Trigger: GGTGGCTTCAAATGATGACAAGAACTTCTTCTCGCAGGACCTATTTTCTCCTTTCAGTTCTGCTGATGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS CCA 72 bp | CTATGCTTGTCTGGCAGTACAGATGGCCCATGGAAATaGGAATCTTTCTTCTTAGTAGTTGACTTCTTAGAG | + |
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Preference number: 6 (lower is better) Translates to: LCLSGSTDGPWK*ESFFLVVDFLE Trigger: CTCTAAGAAGTCAACTACTAAGAAGAAAGATTCCCATTTCCATGGGCCATCTGTACTGCCAGACAAGCATAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS CCA 72 bp | GAAGTGACTGTTGGTAATACTAGTGGGTTTCTCAAATaGAACCCTGTCTCTTTAGTAATAGCCTGCTGCATC | + |
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Preference number: 6 (lower is better) Translates to: EVTVGNTSGFLK*NPVSLVIACCI Trigger: GATGCAGCAGGCTATTACTAAAGAGACAGGGTTCCATTTGAGAAACCCACTAGTATTACCAACAGTCACTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS CAA 72 bp | AGATGCTGCATGGTTACTCTTTCCAATCTTTTCAGATaGCTGCTCCTCTCTAGGTGTGATCTTGTTAGACTG | + |
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Preference number: 6 (lower is better) Translates to: RCCMVTLSNLFR*LLLSRCDLVRL Trigger: CAGTCTAACAAGATCACACCTAGAGAGGAGCAGCAATCTGAAAAGATTGGAAAGAGTAACCATGCAGCATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS CAA 72 bp | CTTCAAACACTGATCTCCTCTTTACTGCGCCTTGAGTaGAAGATGAAGATGAAGATGCTGCATGGTTACTCT | + |
|
Preference number: 6 (lower is better) Translates to: LQTLISSLLRLE*KMKMKMLHGYS Trigger: AGAGTAACCATGCAGCATCTTCATCTTCATCTTCAACTCAAGGCGCAGTAAAGAGGAGATCAGTGTTTGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS CAA 72 bp | CTGAAAGGAGAAAATAGGTCCTGCGAGAAGAAGTTCTaGTCATCATTTGAAGCCACCGATTCCTTCCTATGT | + |
|
Preference number: 6 (lower is better) Translates to: LKGENRSCEKKF*SSFEATDSFLC Trigger: ACATAGGAAGGAATCGGTGGCTTCAAATGATGACAAGAACTTCTTCTCGCAGGACCTATTTTCTCCTTTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS CAA 72 bp | CAGGCTTATGATCAAAGGATAAAGAGTCCATGGGGTTaGCCTTTTTATTGCTGGAATTCTCTTCCAAGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: QAYDQRIKSPWG*PFYCWNSLPRP Trigger: TGGCCTTGGAAGAGAATTCCAGCAATAAAAAGGCAAACCCCATGGACTCTTTATCCTTTGATCATAAGCCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS CAA 90 bp | TCTCAGTGTCAGGCTTATGATCAAAGGATAAAGAGTCCATGGGGTTaGCCTTTTTATTGCTGGAATTCTCTTCCAAGGCCAATAGTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SQCQAYDQRIKSPWG*PFYCWNSLPRPIVP Trigger: AGGAACTATTGGCCTTGGAAGAGAATTCCAGCAATAAAAAGGCAAACCCCATGGACTCTTTATCCTTTGATCATAAGCCTGACACTGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS TCA 72 bp | ACATCTTCAAACACTGATCTCCTCTTTACTGCGCCTTaGGTTGAAGATGAAGATGAAGATGCTGCATGGTTA | + |
|
Preference number: 6 (lower is better) Translates to: TSSNTDLLFTAP*VEDEDEDAAWL Trigger: TAACCATGCAGCATCTTCATCTTCATCTTCAACTCAAGGCGCAGTAAAGAGGAGATCAGTGTTTGAAGATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS TCA 72 bp | AACACCTGTGGCTTCTTCAAGATGCTTGCATCTTCTTaGGTATTATATTTCTCTTCCAGTGATGGCTCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: NTCGFFKMLASS*VLYFSSSDGSC Trigger: ACAGGAGCCATCACTGGAAGAGAAATATAATACTCAAGAAGATGCAAGCATCTTGAAGAAGCCACAGGTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS CCA 72 bp | TTTTCCCTGAGGGTCAGGATTATTTTTAGAAGAGGATaGCTTCTTTGTATGGGTTGCTTCATTGGCACTATG | + |
|
Preference number: 6 (lower is better) Translates to: FSLRVRIIFRRG*LLCMGCFIGTM Trigger: CATAGTGCCAATGAAGCAACCCATACAAAGAAGCCATCCTCTTCTAAAAATAATCCTGACCCTCAGGGAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS CCA 72 bp | TTTCAATTCTTTCCAGGCTGTCACTGTCATCCTGTATaGTTATCTCAGTTTCTTTTGCACCCAGAGTTGACT | + |
|
Preference number: 6 (lower is better) Translates to: FQFFPGCHCHPV*LSQFLLHPELT Trigger: AGTCAACTCTGGGTGCAAAAGAAACTGAGATAACCATACAGGATGACAGTGACAGCCTGGAAAGAATTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS CAA 72 bp | AAAATAGGTCCTGCGAGAAGAAGTTCTTGTCATCATTaGAAGCCACCGATTCCTTCCTATGTGCTCTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: KIGPARRSSCHH*KPPIPSYVLFL Trigger: AAGAAAGAGCACATAGGAAGGAATCGGTGGCTTCAAATGATGACAAGAACTTCTTCTCGCAGGACCTATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS CAA 72 bp | TCAGTTTCTTTTGCACCCAGAGTTGACTTAAAGCTTTaGGAACTAGACACATATGGGTTGGAGTTCTCGACA | + |
|
Preference number: 6 (lower is better) Translates to: SVSFAPRVDLKL*ELDTYGLEFST Trigger: TGTCGAGAACTCCAACCCATATGTGTCTAGTTCCAAAAGCTTTAAGTCAACTCTGGGTGCAAAAGAAACTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS CAA 90 bp | AGTGGTAGACATCTTAAAGAACAATGGCTTGCGAATGACTGTTTCTaGTACTGCAGAGTTACTGAAGAAACGTCTTCTTTTAGGGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SGRHLKEQWLANDCF*YCRVTEETSSFREL Trigger: CAGCTCCCTAAAAGAAGACGTTTCTTCAGTAACTCTGCAGTACAAGAAACAGTCATTCGCAAGCCATTGTTCTTTAAGATGTCTACCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS CAA 90 bp | AGCAAATGGTTTAACTTCCTGACCAAGATATGGAGTTCTGCCATCTaGTACCCAGTGAAATATTCCAGTGTAGGAACACAATTGCTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SKWFNFLTKIWSSAI*YPVKYSSVGTQLLR Trigger: TCTCAGCAATTGTGTTCCTACACTGGAATATTTCACTGGGTACAAGATGGCAGAACTCCATATCTTGGTCAGGAAGTTAAACCATTTGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS TCA 72 bp | TGGCCCATGGAAATGGGAATCTTTCTTCTTAGTAGTTaGCTTCTTAGAGGACATTGGCTCATTTTCATAGGT | + |
|
Preference number: 6 (lower is better) Translates to: WPMEMGIFLLSS*LLRGHWLIFIG Trigger: ACCTATGAAAATGAGCCAATGTCCTCTAAGAAGTCAACTACTAAGAAGAAAGATTCCCATTTCCATGGGCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS TCA 72 bp | AGTAGGTCTCTTCAGAATACTTCTCAAACACATTCTTaGGGATACTATGGGATCGGAAGTTCAGCAAATGGT | + |
|
Preference number: 6 (lower is better) Translates to: SRSLQNTSQTHS*GYYGIGSSANG Trigger: ACCATTTGCTGAACTTCCGATCCCATAGTATCCTCAAGAATGTGTTTGAGAAGTATTCTGAAGAGACCTACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS GCA 72 bp | AAAGAACAATGGCTTGCGAATGACTGTTTCTTGTACTaGAGAGTTACTGAAGAAACGTCTTCTTTTAGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: KEQWLANDCFLY*RVTEETSSFRE Trigger: CTCCCTAAAAGAAGACGTTTCTTCAGTAACTCTGCAGTACAAGAAACAGTCATTCGCAAGCCATTGTTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS GCA 72 bp | TATGCTGTGGGAATATTGATGTCAAAGTTGAGAGTTTaGAGGATGCTGCTTTCCAAAGATACCATATCACTC | + |
|
Preference number: 6 (lower is better) Translates to: YAVGILMSKLRV*RMLLSKDTISL Trigger: GAGTGATATGGTATCTTTGGAAAGCAGCATCCTGCAAACTCTCAACTTTGACATCAATATTCCCACAGCATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS CCA 72 bp | ATGAAGCGGGATAAGGTTAGTGTCTTCATGCTAGCATaGATGCACGAAGCATATCTACGCAGAAAATTATAT | + |
|
Preference number: 6 (lower is better) Translates to: MKRDKVSVFMLA*MHEAYLRRKLY Trigger: ATATAATTTTCTGCGTAGATATGCTTCGTGCATCCATGCTAGCATGAAGACACTAACCTTATCCCGCTTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS CCA 72 bp | AAGTTCAGCAAATGGTTTAACTTCCTGACCAAGATATaGAGTTCTGCCATCTTGTACCCAGTGAAATATTCC | + |
|
Preference number: 6 (lower is better) Translates to: KFSKWFNFLTKI*SSAILYPVKYS Trigger: GGAATATTTCACTGGGTACAAGATGGCAGAACTCCATATCTTGGTCAGGAAGTTAAACCATTTGCTGAACTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS CAA 72 bp | TCAAAGGATAAAGAGTCCATGGGGTTTGCCTTTTTATaGCTGGAATTCTCTTCCAAGGCCAATAGTTCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: SKDKESMGFAFL*LEFSSKANSSF Trigger: AAAGGAACTATTGGCCTTGGAAGAGAATTCCAGCAATAAAAAGGCAAACCCCATGGACTCTTTATCCTTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS CAA 72 bp | TTGAATGCCTTTGAACTTGGCATGATAGCACTGGAATaGTCTGTTCTGGATTCAAAAGCATTGCTGGACATA | + |
|
Preference number: 6 (lower is better) Translates to: LNAFELGMIALE*SVLDSKALLDI Trigger: TATGTCCAGCAATGCTTTTGAATCCAGAACAGACAATTCCAGTGCTATCATGCCAAGTTCAAAGGCATTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS CAA 72 bp | GTTGACTTAAAGCTTTTGGAACTAGACACATATGGGTaGGAGTTCTCGACAGGATTGAATGCCTTTGAACTT | + |
|
Preference number: 6 (lower is better) Translates to: VDLKLLELDTYG*EFSTGLNAFEL Trigger: AAGTTCAAAGGCATTCAATCCTGTCGAGAACTCCAACCCATATGTGTCTAGTTCCAAAAGCTTTAAGTCAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS CAA 72 bp | TTTAACTTCCTGACCAAGATATGGAGTTCTGCCATCTaGTACCCAGTGAAATATTCCAGTGTAGGAACACAA | + |
|
Preference number: 6 (lower is better) Translates to: FNFLTKIWSSAI*YPVKYSSVGTQ Trigger: TTGTGTTCCTACACTGGAATATTTCACTGGGTACAAGATGGCAGAACTCCATATCTTGGTCAGGAAGTTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS CAA 90 bp | TATGTGCTCTTTCTTGACTGGTGGTCTTCTGTGAGGCAAATGGCATaGAGTGGGATAGTTTTTGTGAAATTAAGCAATTTTCATTTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: YVLFLDWWSSVRQMA*SGIVFVKLSNFHLV Trigger: CACCAAATGAAAATTGCTTAATTTCACAAAAACTATCCCACTCAATGCCATTTGCCTCACAGAAGACCACCAGTCAAGAAAGAGCACATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS CAA 90 bp | ATGCACGAAGCATATCTACGCAGAAAATTATATGCTGTGGGAATATaGATGTCAAAGTTGAGAGTTTGCAGGATGCTGCTTTCCAAAGAT | + |
|
Preference number: 6 (lower is better) Translates to: MHEAYLRRKLYAVGI*MSKLRVCRMLLSKD Trigger: ATCTTTGGAAAGCAGCATCCTGCAAACTCTCAACTTTGACATCAATATTCCCACAGCATATAATTTTCTGCGTAGATATGCTTCGTGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS GCA 72 bp | ATAGAAAACAAATTTCTGTCTTCATCTGTCATTTCCTaGCACTCTGACTGTGCTTGCTGTAAGGTTATTGTG | + |
|
Preference number: 6 (lower is better) Translates to: IENKFLSSSVIS*HSDCACCKVIV Trigger: CACAATAACCTTACAGCAAGCACAGTCAGAGTGGCAGGAAATGACAGATGAAGACAGAAATTTGTTTTCTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS GCA 72 bp | ATAATGCACAATTCAAAAGATTCTCTAGATCTTGCTTaGTCAAAGGAGGGATTTTGGCGACTTCAAAGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: IMHNSKDSLDLA*SKEGFWRLQSR Trigger: CCTACTTTGAAGTCGCCAAAATCCCTCCTTTGAGCAAGCAAGATCTAGAGAATCTTTTGAATTGTGCATTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS GCA 72 bp | TGGAATAATGCACAATTCAAAAGATTCTCTAGATCTTaGTTGCTCAAAGGAGGGATTTTGGCGACTTCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: WNNAQFKRFSRS*LLKGGILATSK Trigger: CTTTGAAGTCGCCAAAATCCCTCCTTTGAGCAAGCAAGATCTAGAGAATCTTTTGAATTGTGCATTATTCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS CAA 72 bp | ATATGCTGTGGGAATATTGATGTCAAAGTTGAGAGTTaGCAGGATGCTGCTTTCCAAAGATACCATATCACT | + |
|
Preference number: 6 (lower is better) Translates to: ICCGNIDVKVES*QDAAFQRYHIT Trigger: AGTGATATGGTATCTTTGGAAAGCAGCATCCTGCAAACTCTCAACTTTGACATCAATATTCCCACAGCATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS CAA 72 bp | GCATATCTACGCAGAAAATTATATGCTGTGGGAATATaGATGTCAAAGTTGAGAGTTTGCAGGATGCTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: AYLRRKLYAVGI*MSKLRVCRMLL Trigger: AAGCAGCATCCTGCAAACTCTCAACTTTGACATCAATATTCCCACAGCATATAATTTTCTGCGTAGATATGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS CAA 90 bp | TGTTATTTGTATTCTCTTGTAACACCTGTGGCTTCTTCAAGATGCTaGCATCTTCTTGAGTATTATATTTCTCTTCCAGTGATGGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: CYLYSLVTPVASSRC*HLLEYYISLPVMAP Trigger: AGGAGCCATCACTGGAAGAGAAATATAATACTCAAGAAGATGCAAGCATCTTGAAGAAGCCACAGGTGTTACAAGAGAATACAAATAACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS CAA 90 bp | CTTGGCATGATAGCACTGGAATTGTCTGTTCTGGATTCAAAAGCATaGCTGGACATATTAGGGCTATTCTTATTTTCAAAGACAAGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: LGMIALELSVLDSKA*LDILGLFLFSKTRN Trigger: ATTCCTTGTCTTTGAAAATAAGAATAGCCCTAATATGTCCAGCAATGCTTTTGAATCCAGAACAGACAATTCCAGTGCTATCATGCCAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS CAA 90 bp | TATCTACGCAGAAAATTATATGCTGTGGGAATATTGATGTCAAAGTaGAGAGTTTGCAGGATGCTGCTTTCCAAAGATACCATATCACTC | + |
|
Preference number: 6 (lower is better) Translates to: YLRRKLYAVGILMSK*RVCRMLLSKDTISL Trigger: GAGTGATATGGTATCTTTGGAAAGCAGCATCCTGCAAACTCTCAACTTTGACATCAATATTCCCACAGCATATAATTTTCTGCGTAGATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS TCA 72 bp | GGAAACATGGCTTTTAAGCTCTATATTGTCTTCCTTTaGCTGGACACATTGACTATGAGATGCATTAGTTAC | + |
|
Preference number: 6 (lower is better) Translates to: GNMAFKLYIVFL*LDTLTMRCISY Trigger: GTAACTAATGCATCTCATAGTCAATGTGTCCAGTCAAAGGAAGACAATATAGAGCTTAAAAGCCATGTTTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS TCA 72 bp | TGCCACTCTGACTGTGCTTGCTGTAAGGTTATTGTGTaGGTAGTACTCTTTCTTTTCAGTAAAGATGTATTT | + |
|
Preference number: 6 (lower is better) Translates to: CHSDCACCKVIV*VVLFLFSKDVF Trigger: AAATACATCTTTACTGAAAAGAAAGAGTACTACTCACACAATAACCTTACAGCAAGCACAGTCAGAGTGGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS TCA 72 bp | GAAATTAAGCAATTTTCATTTGGTGGCAATGGATTCTaGAGGAACTCAGGTATAGGTTCCTTCCTATGTGAT | + |
|
Preference number: 6 (lower is better) Translates to: EIKQFSFGGNGF*RNSGIGSFLCD Trigger: ATCACATAGGAAGGAACCTATACCTGAGTTCCTTCAGAATCCATTGCCACCAAATGAAAATTGCTTAATTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS GCA 72 bp | ATGGATGCACGAAGCATATCTACGCAGAAAATTATATaGTGTGGGAATATTGATGTCAAAGTTGAGAGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: MDARSISTQKII*CGNIDVKVESL Trigger: CAAACTCTCAACTTTGACATCAATATTCCCACAGCATATAATTTTCTGCGTAGATATGCTTCGTGCATCCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS CCA 72 bp | TATCTATGTTGTACTCTTCATCAGTTAATACCATTCTaGCTATTTCACCCATCTCAGTGTCAGGCTTATGAT | + |
|
Preference number: 6 (lower is better) Translates to: YLCCTLHQLIPF*LFHPSQCQAYD Trigger: ATCATAAGCCTGACACTGAGATGGGTGAAATAGCCAGAATGGTATTAACTGATGAAGAGTACAACATAGATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS CAA 72 bp | ACAGATGGTTCCTCAGTAGTTAGTGTTTTAGGCTTGTaGGGTATATCCAGAATAAACTCTTTCTCCATGTTT | + |
|
Preference number: 6 (lower is better) Translates to: TDGSSVVSVLGL*GISRINSFSMF Trigger: AAACATGGAGAAAGAGTTTATTCTGGATATACCCAACAAGCCTAAAACACTAACTACTGAGGAACCATCTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS CAA 72 bp | CATCTTAAAGAACAATGGCTTGCGAATGACTGTTTCTaGTACTGCAGAGTTACTGAAGAAACGTCTTCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: HLKEQWLANDCF*YCRVTEETSSF Trigger: AAAAGAAGACGTTTCTTCAGTAACTCTGCAGTACAAGAAACAGTCATTCGCAAGCCATTGTTCTTTAAGATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS CAA 72 bp | TTTCTTGACTGGTGGTCTTCTGTGAGGCAAATGGCATaGAGTGGGATAGTTTTTGTGAAATTAAGCAATTTT | + |
|
Preference number: 6 (lower is better) Translates to: FLDWWSSVRQMA*SGIVFVKLSNF Trigger: AAAATTGCTTAATTTCACAAAAACTATCCCACTCAATGCCATTTGCCTCACAGAAGACCACCAGTCAAGAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS CAA 90 bp | CTATGTTTCCCTTTAAAAGTAACTGGCTCTGTTAAAGTAGCATCTTaGTTATTTGTATTCTCTTGTAACACCTGTGGCTTCTTCAAGATG | + |
|
Preference number: 6 (lower is better) Translates to: LCFPLKVTGSVKVAS*LFVFSCNTCGFFKM Trigger: CATCTTGAAGAAGCCACAGGTGTTACAAGAGAATACAAATAACAAAGATGCTACTTTAACAGAGCCAGTTACTTTTAAAGGGAAACATAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS CAA 90 bp | CAGAAAATTATATGCTGTGGGAATATTGATGTCAAAGTTGAGAGTTaGCAGGATGCTGCTTTCCAAAGATACCATATCACTCTTTTCATA | + |
|
Preference number: 6 (lower is better) Translates to: QKIICCGNIDVKVES*QDAAFQRYHITLFI Trigger: TATGAAAAGAGTGATATGGTATCTTTGGAAAGCAGCATCCTGCAAACTCTCAACTTTGACATCAATATTCCCACAGCATATAATTTTCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS GCA 72 bp | TTGTATTCTCTTGTAACACCTGTGGCTTCTTCAAGATaGTTGCATCTTCTTGAGTATTATATTTCTCTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LYSLVTPVASSR*LHLLEYYISLP Trigger: TGGAAGAGAAATATAATACTCAAGAAGATGCAAGCATCTTGAAGAAGCCACAGGTGTTACAAGAGAATACAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS CCA 72 bp | AGACTTCTTCAAATCAGTCATCTCCTCAATGATGGTTaGATCTTCAGGTTTATCCTTCTTTTTAGAAGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: RLLQISHLLNDG*IFRFILLFRSH Trigger: ATGACTTCTAAAAAGAAGGATAAACCTGAAGATCCAACCATCATTGAGGAGATGACTGATTTGAAGAAGTCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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| CDS CAA 72 bp | ATAGCACTGGAATTGTCTGTTCTGGATTCAAAAGCATaGCTGGACATATTAGGGCTATTCTTATTTTCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: IALELSVLDSKA*LDILGLFLFSK Trigger: CTTTGAAAATAAGAATAGCCCTAATATGTCCAGCAATGCTTTTGAATCCAGAACAGACAATTCCAGTGCTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056725.8 ENSMUST00000115752.8 |
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